View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4306-Insertion-75 (Length: 292)
Name: NF4306-Insertion-75
Description: NF4306
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4306-Insertion-75 |
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Alignment Details
Target: chr8 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 6 - 269
Target Start/End: Original strand, 14235014 - 14235283
Alignment:
| Q |
6 |
tataagacataaanaaacaaacaagtgaat-atcaaatataaataaagacaatcaac-gatggatttccacttagtttaatattngtaacataaaataca |
103 |
Q |
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| T |
14235014 |
tataagacataaataat-aaacaagtgaatgatcaaatataactaaagacaatcaacagatggatttccacttagtttattatttgtaacataaaatact |
14235112 |
T |
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| Q |
104 |
acnnnnnnnatttaataagtgtaccaaaatacatcatctaaaca--ttgtatc-ttttgtg-acngtactcattcaaacacatgtcataacaaatcctaa |
199 |
Q |
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|| ||||||||||||||||||||||||||||||||||| ||||||| ||||||| || |||||||||||||| ||||||||||||||||||| |
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| T |
14235113 |
actttctttatttaataagtgtaccaaaatacatcatctaaacactttgtatccttttgtggacggtactcattcaaacgtatgtcataacaaatcctaa |
14235212 |
T |
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| Q |
200 |
tttcttggattt--ggtttggaatgccattggaggctgtccacgacgcatcaaaattgtggttgtgtttcca |
269 |
Q |
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|||||||||||| ||||||||||||||||||| ||||| ||| ||||||||| |||||||||||||||| |
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| T |
14235213 |
tttcttggatttggggtttggaatgccattgga-actgtctccgatgcatcaaaactgtggttgtgtttcca |
14235283 |
T |
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