View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4306-Insertion-89 (Length: 187)
Name: NF4306-Insertion-89
Description: NF4306
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4306-Insertion-89 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 39520328 - 39520514
Alignment:
| Q |
1 |
taaggacctattagttatagggaatcatatcaagctagtgaggttccaaactttctctaaatttcacacacatgccatactcaaaaacttacacaacaac |
100 |
Q |
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| T |
39520328 |
taaggacctattagttatagggaatcatatcaagctagtgaggttccaaactttctctaaatttcacacacatgccatactcaaaaacttacacaacaac |
39520427 |
T |
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| Q |
101 |
acgcaaagcctacgtgcactcatacattattcttcttctcctcaaattgtttgcaatccaatatatggatgtgggacccaacattct |
187 |
Q |
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| T |
39520428 |
acgcaaagcctacgtgcactcatacattattcttcttctcctcaaattgtttgcaatccaatatatggatgtgggacccaacattct |
39520514 |
T |
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