View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4306_high_16 (Length: 337)
Name: NF4306_high_16
Description: NF4306
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4306_high_16 |
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Alignment Details
Target: chr7 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 11 - 321
Target Start/End: Original strand, 3520907 - 3521215
Alignment:
| Q |
11 |
cagagaaacgctttgaatttgttggagttctgcaaattccatttgcaagaaaccgtctttgatcgaaaggaagagaagatttgagtgaaatacgtttgtc |
110 |
Q |
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| T |
3520907 |
cagagaaacgcttcgaatttgtttgagttctgcaaattccatttgctagaaaccgtctttgatttaatggaagtgatgatttgagtgaaacgcgtttagc |
3521006 |
T |
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| Q |
111 |
caagaaagagagagaaacaccgtgatgatgagaaaaatatatagcactgtttcttctgttgaaggaaatgggagttgaatagggaagagaaaacgacgtc |
210 |
Q |
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| T |
3521007 |
ggagaaagagagagaaacacggtgatgatgagaaaaatatatagcactgtttcttctgttgaaggaaatgggagttgaatagggaagagaaaacgacgtc |
3521106 |
T |
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| Q |
211 |
gttgaagccatcactgaattgaaagaagaaagaaagagtgatgatattgaatattgatagtaagaaagtgtttttgtgtttgcgttaatactgagaaagg |
310 |
Q |
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| T |
3521107 |
gttgaagccatcactgaattgaaagaagaaagaaagagtgatgatattgaatattgatagtaagaaagtg--tttgtgtttgcgttaatactgagaaagg |
3521204 |
T |
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| Q |
311 |
aataagagaga |
321 |
Q |
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| T |
3521205 |
aataagagaga |
3521215 |
T |
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