View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4306_high_38 (Length: 241)
Name: NF4306_high_38
Description: NF4306
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4306_high_38 |
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Alignment Details
Target: chr8 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 20 - 224
Target Start/End: Original strand, 11599274 - 11599478
Alignment:
| Q |
20 |
ataacatgtggacagatgcatgcaatataaaaagcatcaaagttttctccgaaagtatgggatattagtaaattttaattaaagtccttccatatttgga |
119 |
Q |
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| T |
11599274 |
ataacatgtggacagatgcatgcaatataaaaagcatcaaagttttctccgaaagtatgggatattagtaaattttaattaaagtacttccatatttgga |
11599373 |
T |
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| Q |
120 |
aaagaagaatccatctagttcgtgatcccatgtgggccaaatcaaggattttcattttaattatttcttcatttaggacactcgaaaacaacaaatagaa |
219 |
Q |
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| T |
11599374 |
aaagaagaatctatctagttcgtgatcccatgtgggccaaatcaaggattttcattttaattatttcttcatttaggacactcgaaaacaacaaaaagat |
11599473 |
T |
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| Q |
220 |
gttag |
224 |
Q |
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||||| |
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| T |
11599474 |
gttag |
11599478 |
T |
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