View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4306_low_27 (Length: 314)
Name: NF4306_low_27
Description: NF4306
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4306_low_27 |
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Alignment Details
Target: chr3 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 5 - 296
Target Start/End: Complemental strand, 34862329 - 34862038
Alignment:
| Q |
5 |
tcattttgacttggttgacttccacctgatatttgtgaaagcatgtactttggaggacctcttaagtcttcaaatagagggccaaatatagttagataaa |
104 |
Q |
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| T |
34862329 |
tcattttgacttggttgacttccacctgatatttgtgaaagcatgtactttggaggacctcttaagtcttcaaatagagggccaaatatagttagataaa |
34862230 |
T |
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| Q |
105 |
cagatttagctttctctttccatgtccattggcctcttttacctggtccaagagttactcttataagctcttgataccaatgaaatgtctcaccttcatg |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34862229 |
cagatttagctttctctttccatgtccattggcctcttttacctggtccaagagttactcttataagctcttgataccaatgaaatgtctcaccttcatg |
34862130 |
T |
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| Q |
205 |
atgaacttccttgtattgaagaagttttccaaatgtgattccaactgataggaacatgaacaatgcgagaagcacagtggacacaaaaatca |
296 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34862129 |
atgaacttccttgtattgaagaagttttccaaatgtgattccaactgataggaacatgaacaatgcgagaagcacagtggacacaaaaatca |
34862038 |
T |
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