View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4306_low_9 (Length: 436)

Name: NF4306_low_9
Description: NF4306
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4306_low_9
NF4306_low_9
[»] chr4 (62 HSPs)
chr4 (18-427)||(38619768-38620178)
chr4 (109-233)||(19839191-19839316)
chr4 (109-236)||(55309209-55309338)
chr4 (109-235)||(4586756-4586883)
chr4 (109-235)||(25026569-25026696)
chr4 (109-233)||(5473861-5473986)
chr4 (109-233)||(9670479-9670604)
chr4 (109-234)||(32175736-32175862)
chr4 (112-236)||(19680421-19680546)
chr4 (109-233)||(22168280-22168405)
chr4 (109-233)||(38645762-38645887)
chr4 (109-234)||(2275676-2275803)
chr4 (109-234)||(12071974-12072100)
chr4 (109-234)||(13028815-13028941)
chr4 (109-234)||(13564914-13565040)
chr4 (114-234)||(44783499-44783621)
chr4 (109-233)||(7111946-7112071)
chr4 (112-226)||(18051854-18051969)
chr4 (109-235)||(22128310-22128437)
chr4 (112-234)||(46286228-46286351)
chr4 (112-233)||(9058952-9059074)
chr4 (112-233)||(9238625-9238747)
chr4 (112-233)||(27040025-27040147)
chr4 (109-234)||(45532578-45532704)
chr4 (112-228)||(37378628-37378745)
chr4 (119-233)||(18714924-18715039)
chr4 (109-233)||(5399621-5399746)
chr4 (109-233)||(8878895-8879020)
chr4 (109-233)||(29625337-29625462)
chr4 (109-233)||(30507999-30508124)
chr4 (109-233)||(54539298-54539423)
chr4 (117-236)||(38223530-38223650)
chr4 (109-223)||(25147733-25147848)
chr4 (125-234)||(30268987-30269097)
chr4 (125-234)||(30283092-30283202)
chr4 (109-233)||(9239281-9239406)
chr4 (109-233)||(33914071-33914196)
chr4 (109-232)||(4627079-4627203)
chr4 (109-203)||(22156631-22156726)
chr4 (109-233)||(1638459-1638584)
chr4 (117-233)||(36689697-36689814)
chr4 (125-233)||(42055425-42055534)
chr4 (117-232)||(24682328-24682444)
chr4 (109-235)||(4606827-4606954)
chr4 (109-203)||(14944758-14944853)
chr4 (109-233)||(12105995-12106119)
chr4 (118-233)||(30420033-30420149)
chr4 (109-235)||(16915381-16915508)
chr4 (112-226)||(30568006-30568121)
chr4 (117-233)||(9913278-9913395)
chr4 (112-203)||(18744100-18744192)
chr4 (109-232)||(29238435-29238559)
chr4 (125-238)||(34557211-34557325)
chr4 (109-233)||(45091286-45091398)
chr4 (109-169)||(37761907-37761967)
chr4 (127-234)||(25225129-25225235)
chr4 (109-203)||(6553816-6553911)
chr4 (127-233)||(3613025-3613133)
chr4 (109-226)||(39234954-39235071)
chr4 (121-203)||(313611-313694)
chr4 (117-155)||(4068749-4068787)
chr4 (120-233)||(23104371-23104486)
[»] chr8 (67 HSPs)
chr8 (109-233)||(11938757-11938881)
chr8 (109-234)||(3823145-3823271)
chr8 (109-233)||(8555304-8555429)
chr8 (109-236)||(30687948-30688076)
chr8 (112-234)||(19240882-19241005)
chr8 (112-234)||(19314066-19314189)
chr8 (109-234)||(19488060-19488186)
chr8 (109-233)||(22939325-22939450)
chr8 (117-233)||(24576024-24576141)
chr8 (109-233)||(43431559-43431684)
chr8 (109-234)||(19256224-19256350)
chr8 (109-234)||(23752285-23752411)
chr8 (109-234)||(27869250-27869376)
chr8 (109-234)||(33652579-33652705)
chr8 (109-233)||(17810310-17810435)
chr8 (109-233)||(17824616-17824741)
chr8 (117-233)||(27910764-27910881)
chr8 (117-233)||(27957183-27957300)
chr8 (109-233)||(25273328-25273452)
chr8 (112-233)||(4330993-4331115)
chr8 (109-234)||(13060930-13061056)
chr8 (117-234)||(18010059-18010177)
chr8 (109-234)||(21350490-21350616)
chr8 (112-233)||(24193196-24193318)
chr8 (112-233)||(25655858-25655980)
chr8 (109-233)||(25000431-25000556)
chr8 (109-233)||(32247921-32248046)
chr8 (109-234)||(24636664-24636791)
chr8 (109-233)||(29350935-29351061)
chr8 (109-234)||(17103864-17103990)
chr8 (109-234)||(30466953-30467079)
chr8 (109-234)||(40289420-40289545)
chr8 (109-233)||(5670169-5670294)
chr8 (109-233)||(6816383-6816508)
chr8 (125-233)||(8824853-8824962)
chr8 (127-234)||(4647754-4647862)
chr8 (109-234)||(32961671-32961797)
chr8 (109-233)||(6817066-6817191)
chr8 (109-233)||(31399508-31399633)
chr8 (127-233)||(16061939-16062046)
chr8 (109-234)||(10917839-10917965)
chr8 (109-233)||(26399007-26399132)
chr8 (130-233)||(8789873-8789977)
chr8 (112-231)||(9915043-9915162)
chr8 (154-233)||(25274654-25274734)
chr8 (109-234)||(33412976-33413095)
chr8 (109-200)||(19493688-19493781)
chr8 (117-233)||(29345091-29345208)
chr8 (127-233)||(21219240-21219347)
chr8 (109-231)||(37992111-37992234)
chr8 (117-234)||(15251622-15251739)
chr8 (109-234)||(18844543-18844669)
chr8 (127-235)||(6084244-6084351)
chr8 (112-234)||(9631418-9631542)
chr8 (148-234)||(42700656-42700743)
chr8 (127-233)||(31344172-31344279)
chr8 (109-190)||(5879216-5879297)
chr8 (117-234)||(17003282-17003400)
chr8 (109-226)||(14304241-14304359)
chr8 (134-203)||(15289679-15289749)
chr8 (134-203)||(15470048-15470118)
chr8 (186-234)||(24479812-24479860)
chr8 (109-152)||(25651090-25651133)
chr8 (109-203)||(41527730-41527825)
chr8 (109-158)||(24479874-24479923)
chr8 (138-229)||(2265383-2265474)
chr8 (187-238)||(18844656-18844708)
[»] chr7 (67 HSPs)
chr7 (109-233)||(21917334-21917459)
chr7 (109-233)||(22486408-22486533)
chr7 (109-234)||(1842908-1843034)
chr7 (109-234)||(3904477-3904603)
chr7 (109-233)||(3872187-3872312)
chr7 (109-233)||(18217843-18217968)
chr7 (109-233)||(23232053-23232178)
chr7 (109-233)||(23750736-23750861)
chr7 (109-233)||(27806032-27806157)
chr7 (109-233)||(28800892-28801017)
chr7 (109-233)||(6849211-6849336)
chr7 (109-233)||(7733312-7733437)
chr7 (109-233)||(31425511-31425636)
chr7 (109-233)||(47523650-47523775)
chr7 (117-234)||(2650827-2650945)
chr7 (109-234)||(9698537-9698663)
chr7 (109-234)||(15014404-15014530)
chr7 (109-233)||(21623035-21623159)
chr7 (109-234)||(33427704-33427829)
chr7 (109-235)||(4514779-4514906)
chr7 (112-234)||(11036524-11036647)
chr7 (109-233)||(15969798-15969924)
chr7 (112-234)||(37135284-37135407)
chr7 (109-234)||(39979623-39979749)
chr7 (109-233)||(23577189-23577314)
chr7 (109-233)||(24605852-24605977)
chr7 (112-235)||(20174037-20174161)
chr7 (109-235)||(1824198-1824325)
chr7 (109-203)||(10050866-10050961)
chr7 (127-233)||(23539264-23539371)
chr7 (109-234)||(40847434-40847560)
chr7 (109-235)||(42926417-42926545)
chr7 (110-233)||(1907370-1907494)
chr7 (109-216)||(36636520-36636628)
chr7 (112-234)||(20429482-20429605)
chr7 (109-234)||(26577279-26577405)
chr7 (109-233)||(20923958-20924083)
chr7 (127-235)||(48933168-48933277)
chr7 (127-233)||(23699825-23699932)
chr7 (117-231)||(32267369-32267483)
chr7 (117-233)||(816191-816308)
chr7 (117-234)||(14786634-14786752)
chr7 (110-203)||(45664783-45664877)
chr7 (134-233)||(21871607-21871707)
chr7 (109-232)||(24140464-24140588)
chr7 (117-236)||(38057654-38057774)
chr7 (112-229)||(2457687-2457803)
chr7 (117-217)||(31042273-31042374)
chr7 (109-233)||(36993834-36993959)
chr7 (109-233)||(2093362-2093487)
chr7 (129-229)||(27304904-27305005)
chr7 (117-224)||(11852030-11852138)
chr7 (109-233)||(10222630-10222754)
chr7 (119-224)||(26415448-26415554)
chr7 (117-225)||(22501616-22501725)
chr7 (127-232)||(1841784-1841889)
chr7 (133-190)||(15330249-15330306)
chr7 (135-234)||(27130372-27130472)
chr7 (109-233)||(1821996-1822118)
chr7 (109-233)||(687891-688005)
chr7 (133-232)||(27132722-27132822)
chr7 (180-226)||(5106740-5106786)
chr7 (109-203)||(11890177-11890272)
chr7 (186-233)||(38090355-38090402)
chr7 (187-235)||(22486372-22486421)
chr7 (117-233)||(25777112-25777229)
chr7 (180-233)||(30908945-30908998)
[»] chr3 (90 HSPs)
chr3 (110-233)||(5260948-5261072)
chr3 (109-233)||(48404870-48404995)
chr3 (109-233)||(1745488-1745612)
chr3 (109-234)||(13921335-13921461)
chr3 (109-233)||(23773487-23773612)
chr3 (109-233)||(26098823-26098948)
chr3 (109-233)||(27449098-27449223)
chr3 (109-236)||(13905035-13905163)
chr3 (109-236)||(19269861-19269989)
chr3 (109-235)||(8110349-8110476)
chr3 (117-233)||(10941665-10941782)
chr3 (109-233)||(11007683-11007808)
chr3 (109-233)||(18091547-18091672)
chr3 (109-233)||(21816731-21816856)
chr3 (109-233)||(29236054-29236179)
chr3 (109-232)||(11915768-11915892)
chr3 (109-235)||(1310957-1311084)
chr3 (109-234)||(25882580-25882706)
chr3 (112-236)||(18104527-18104652)
chr3 (117-233)||(19223467-19223584)
chr3 (109-233)||(19610348-19610473)
chr3 (109-233)||(21020075-21020200)
chr3 (109-233)||(21490034-21490159)
chr3 (112-236)||(26390631-26390756)
chr3 (109-233)||(43329763-43329888)
chr3 (109-236)||(15063989-15064117)
chr3 (109-233)||(8428181-8428306)
chr3 (109-233)||(17762652-17762777)
chr3 (109-233)||(19063972-19064097)
chr3 (112-226)||(4393357-4393472)
chr3 (112-233)||(11219151-11219273)
chr3 (112-233)||(16299874-16299996)
chr3 (127-233)||(7623531-7623638)
chr3 (112-234)||(9652591-9652714)
chr3 (109-237)||(10803730-10803860)
chr3 (109-234)||(5565732-5565858)
chr3 (109-238)||(6088223-6088353)
chr3 (109-233)||(3461310-3461435)
chr3 (109-233)||(11837214-11837339)
chr3 (109-233)||(29216002-29216127)
chr3 (117-233)||(31250106-31250223)
chr3 (109-233)||(46012728-46012853)
chr3 (127-234)||(8546273-8546381)
chr3 (109-236)||(30219348-30219476)
chr3 (112-226)||(18539817-18539932)
chr3 (127-233)||(29956400-29956507)
chr3 (127-233)||(30005555-30005662)
chr3 (109-233)||(5744426-5744551)
chr3 (109-233)||(5781385-5781510)
chr3 (112-233)||(8543482-8543603)
chr3 (109-217)||(28859601-28859710)
chr3 (109-203)||(19545520-19545615)
chr3 (109-230)||(28389983-28390105)
chr3 (112-233)||(36543762-36543884)
chr3 (109-234)||(21088762-21088886)
chr3 (109-233)||(50665636-50665761)
chr3 (127-234)||(11085341-11085449)
chr3 (109-232)||(27968925-27969049)
chr3 (139-233)||(20761950-20762045)
chr3 (127-233)||(37283551-37283658)
chr3 (109-233)||(29451104-29451230)
chr3 (109-233)||(17269604-17269729)
chr3 (125-233)||(18380050-18380159)
chr3 (117-233)||(31433755-31433872)
chr3 (109-233)||(49915461-49915586)
chr3 (117-233)||(26830441-26830559)
chr3 (118-224)||(29704041-29704148)
chr3 (117-234)||(46942505-46942623)
chr3 (117-233)||(23217208-23217325)
chr3 (109-233)||(47263265-47263390)
chr3 (112-203)||(17582331-17582423)
chr3 (109-228)||(26963254-26963374)
chr3 (117-230)||(1628233-1628347)
chr3 (112-233)||(36564439-36564561)
chr3 (109-234)||(27182657-27182781)
chr3 (112-203)||(6718723-6718815)
chr3 (109-233)||(10772053-10772179)
chr3 (109-235)||(20088410-20088542)
chr3 (136-235)||(6447244-6447344)
chr3 (109-233)||(15490045-15490169)
chr3 (125-233)||(15501551-15501661)
chr3 (109-184)||(23233213-23233288)
chr3 (109-203)||(50240756-50240851)
chr3 (117-202)||(27711199-27711285)
chr3 (109-217)||(20615359-20615468)
chr3 (109-154)||(35579605-35579650)
chr3 (127-174)||(27212841-27212888)
chr3 (114-235)||(13615430-13615552)
chr3 (190-231)||(11386427-11386468)
chr3 (168-228)||(40287486-40287546)
[»] chr5 (57 HSPs)
chr5 (109-235)||(40484058-40484185)
chr5 (109-235)||(618308-618435)
chr5 (109-233)||(2472714-2472839)
chr5 (109-233)||(16631874-16631999)
chr5 (110-234)||(17039630-17039755)
chr5 (109-233)||(38837671-38837796)
chr5 (109-236)||(746865-746993)
chr5 (109-235)||(16121837-16121964)
chr5 (109-234)||(10494751-10494877)
chr5 (109-234)||(35620343-35620468)
chr5 (109-235)||(12328224-12328351)
chr5 (109-234)||(33818560-33818686)
chr5 (109-233)||(7888811-7888936)
chr5 (109-233)||(12045741-12045866)
chr5 (109-233)||(26708585-26708710)
chr5 (109-233)||(26978319-26978444)
chr5 (109-233)||(5982659-5982785)
chr5 (112-233)||(8108860-8108982)
chr5 (109-234)||(24138840-24138966)
chr5 (109-233)||(8886851-8886976)
chr5 (109-232)||(17771969-17772093)
chr5 (109-233)||(23408994-23409120)
chr5 (109-235)||(25397786-25397913)
chr5 (112-234)||(28265474-28265597)
chr5 (127-233)||(36196426-36196533)
chr5 (109-233)||(36831890-36832015)
chr5 (109-234)||(17986743-17986869)
chr5 (109-234)||(23423755-23423881)
chr5 (109-233)||(4125188-4125313)
chr5 (112-224)||(23975652-23975765)
chr5 (109-233)||(25652583-25652708)
chr5 (109-236)||(13620124-13620252)
chr5 (127-233)||(15061005-15061112)
chr5 (117-234)||(17036411-17036529)
chr5 (133-234)||(7003729-7003831)
chr5 (109-235)||(25673227-25673353)
chr5 (109-233)||(36597340-36597465)
chr5 (117-233)||(27428012-27428129)
chr5 (112-233)||(13974078-13974200)
chr5 (117-234)||(20959530-20959648)
chr5 (112-233)||(36716200-36716322)
chr5 (109-233)||(20187941-20188066)
chr5 (117-203)||(17079427-17079514)
chr5 (109-235)||(23974574-23974701)
chr5 (117-234)||(10420251-10420369)
chr5 (119-232)||(33734974-33735088)
chr5 (109-230)||(35778155-35778277)
chr5 (117-233)||(11927786-11927903)
chr5 (109-205)||(33816786-33816883)
chr5 (133-223)||(32726736-32726827)
chr5 (109-223)||(3080706-3080821)
chr5 (119-164)||(31853158-31853203)
chr5 (128-238)||(16472176-16472287)
chr5 (189-233)||(29727895-29727939)
chr5 (188-233)||(16464723-16464768)
chr5 (194-234)||(19890985-19891025)
chr5 (109-172)||(9024227-9024291)
[»] scaffold0576 (1 HSPs)
scaffold0576 (109-234)||(9228-9354)
[»] chr6 (77 HSPs)
chr6 (109-234)||(15364457-15364583)
chr6 (109-234)||(28364925-28365051)
chr6 (109-233)||(9892977-9893102)
chr6 (109-234)||(21990174-21990299)
chr6 (109-234)||(24661008-24661134)
chr6 (109-230)||(25398016-25398138)
chr6 (109-233)||(495627-495752)
chr6 (109-233)||(6598478-6598603)
chr6 (109-233)||(26224442-26224567)
chr6 (109-234)||(11049750-11049876)
chr6 (109-233)||(12200708-12200833)
chr6 (109-233)||(12951722-12951847)
chr6 (109-233)||(15448399-15448524)
chr6 (117-233)||(18033526-18033642)
chr6 (109-234)||(15961406-15961532)
chr6 (109-234)||(22083852-22083978)
chr6 (109-233)||(2992629-2992754)
chr6 (109-233)||(6605496-6605621)
chr6 (112-236)||(22579346-22579471)
chr6 (109-233)||(26939601-26939726)
chr6 (109-232)||(27796835-27796959)
chr6 (118-236)||(1939239-1939358)
chr6 (119-233)||(2669333-2669448)
chr6 (109-230)||(11077663-11077785)
chr6 (109-234)||(33250707-33250833)
chr6 (118-234)||(6978300-6978417)
chr6 (117-232)||(5360431-5360547)
chr6 (109-227)||(5192195-5192314)
chr6 (117-234)||(18492391-18492509)
chr6 (112-233)||(20182162-20182284)
chr6 (112-233)||(22153707-22153829)
chr6 (109-233)||(30833960-30834085)
chr6 (112-230)||(21140956-21141075)
chr6 (109-234)||(12160846-12160971)
chr6 (109-233)||(12499230-12499356)
chr6 (109-233)||(12506559-12506685)
chr6 (109-233)||(12509545-12509671)
chr6 (109-230)||(14872133-14872255)
chr6 (127-233)||(15509188-15509295)
chr6 (112-233)||(16250802-16250924)
chr6 (125-234)||(28668130-28668240)
chr6 (109-233)||(9885257-9885382)
chr6 (109-233)||(14886575-14886700)
chr6 (125-233)||(17919566-17919675)
chr6 (109-233)||(18048802-18048927)
chr6 (133-232)||(10458802-10458902)
chr6 (109-234)||(11530239-11530365)
chr6 (117-215)||(12845025-12845124)
chr6 (127-233)||(14772693-14772800)
chr6 (109-230)||(11350196-11350315)
chr6 (133-233)||(12351586-12351687)
chr6 (127-233)||(21691495-21691603)
chr6 (112-203)||(27705439-27705531)
chr6 (109-227)||(20692817-20692936)
chr6 (109-190)||(13145016-13145097)
chr6 (134-229)||(12157380-12157476)
chr6 (109-188)||(19175823-19175902)
chr6 (109-234)||(6065451-6065577)
chr6 (121-234)||(16118172-16118286)
chr6 (112-217)||(23281803-23281908)
chr6 (109-229)||(1954895-1955015)
chr6 (151-234)||(5250195-5250279)
chr6 (120-235)||(9060115-9060231)
chr6 (117-203)||(343593-343680)
chr6 (117-227)||(12205191-12205302)
chr6 (109-223)||(22055622-22055737)
chr6 (112-233)||(14036637-14036751)
chr6 (109-203)||(33547560-33547655)
chr6 (117-235)||(10929494-10929614)
chr6 (117-234)||(12680185-12680301)
chr6 (134-191)||(3673176-3673233)
chr6 (151-234)||(8844167-8844252)
chr6 (152-233)||(9878515-9878596)
chr6 (129-234)||(11431638-11431745)
chr6 (194-234)||(33191180-33191220)
chr6 (186-233)||(13251379-13251426)
chr6 (127-190)||(5270424-5270488)
[»] chr2 (53 HSPs)
chr2 (109-234)||(43408510-43408636)
chr2 (109-233)||(44476375-44476500)
chr2 (109-233)||(23857958-23858082)
chr2 (112-232)||(28319580-28319701)
chr2 (109-233)||(41637628-41637753)
chr2 (117-234)||(32008970-32009089)
chr2 (117-235)||(28841340-28841459)
chr2 (109-234)||(13788054-13788180)
chr2 (109-233)||(12779610-12779735)
chr2 (109-233)||(18551253-18551378)
chr2 (109-233)||(37552237-37552362)
chr2 (109-233)||(41736182-41736307)
chr2 (109-235)||(44722942-44723069)
chr2 (112-233)||(22140364-22140486)
chr2 (109-239)||(7093578-7093709)
chr2 (112-226)||(32300464-32300579)
chr2 (109-234)||(14757120-14757246)
chr2 (112-233)||(21293711-21293833)
chr2 (109-233)||(13613093-13613218)
chr2 (109-233)||(29749403-29749528)
chr2 (109-233)||(30783348-30783473)
chr2 (127-233)||(20065074-20065181)
chr2 (109-233)||(26687690-26687816)
chr2 (112-233)||(15636735-15636857)
chr2 (112-226)||(1141549-1141664)
chr2 (139-233)||(27039908-27040003)
chr2 (109-235)||(27327626-27327753)
chr2 (109-234)||(26243320-26243446)
chr2 (112-233)||(32185845-32185967)
chr2 (112-232)||(23388379-23388500)
chr2 (117-233)||(31266372-31266489)
chr2 (109-233)||(37723992-37724117)
chr2 (109-234)||(36550846-36550971)
chr2 (109-233)||(40018812-40018937)
chr2 (112-235)||(28262377-28262501)
chr2 (117-228)||(38362276-38362388)
chr2 (112-233)||(8430309-8430431)
chr2 (117-223)||(18916411-18916517)
chr2 (134-237)||(2556130-2556234)
chr2 (109-172)||(27523021-27523084)
chr2 (119-216)||(35697475-35697573)
chr2 (109-221)||(8763644-8763757)
chr2 (109-233)||(9004308-9004433)
chr2 (109-223)||(44366007-44366122)
chr2 (117-233)||(37802379-37802495)
chr2 (109-236)||(18609524-18609652)
chr2 (111-203)||(31966555-31966647)
chr2 (127-216)||(9590498-9590588)
chr2 (152-233)||(16098917-16098999)
chr2 (152-233)||(22192232-22192314)
chr2 (109-160)||(29998633-29998684)
chr2 (186-227)||(12860235-12860276)
chr2 (135-234)||(36373934-36374034)
[»] chr1 (75 HSPs)
chr1 (109-236)||(19865258-19865386)
chr1 (109-235)||(28229453-28229580)
chr1 (109-234)||(6459231-6459357)
chr1 (109-237)||(4340421-4340550)
chr1 (109-233)||(9109975-9110100)
chr1 (109-233)||(12720823-12720948)
chr1 (109-233)||(41752447-41752572)
chr1 (109-233)||(45839306-45839431)
chr1 (109-234)||(50845329-50845455)
chr1 (109-236)||(46790014-46790142)
chr1 (109-235)||(6412051-6412178)
chr1 (109-227)||(46785964-46786083)
chr1 (109-234)||(41120736-41120862)
chr1 (109-233)||(8940994-8941119)
chr1 (117-234)||(46339444-46339562)
chr1 (109-234)||(14760881-14761007)
chr1 (112-233)||(20408160-20408282)
chr1 (109-237)||(15243099-15243228)
chr1 (109-233)||(22603562-22603687)
chr1 (109-233)||(29549432-29549557)
chr1 (112-226)||(9464120-9464235)
chr1 (127-232)||(25787998-25788104)
chr1 (112-233)||(50092298-50092420)
chr1 (109-233)||(7830045-7830170)
chr1 (109-233)||(9177114-9177239)
chr1 (109-233)||(13102330-13102455)
chr1 (112-235)||(23457914-23458038)
chr1 (109-208)||(41071860-41071960)
chr1 (109-235)||(17200008-17200135)
chr1 (112-233)||(12161831-12161953)
chr1 (112-233)||(22158819-22158941)
chr1 (112-233)||(52183695-52183817)
chr1 (117-233)||(19081750-19081867)
chr1 (117-233)||(19129638-19129755)
chr1 (117-237)||(38531166-38531287)
chr1 (110-233)||(48522533-48522657)
chr1 (119-233)||(9985327-9985442)
chr1 (117-234)||(7181554-7181672)
chr1 (109-234)||(18894899-18895025)
chr1 (134-235)||(27253853-27253955)
chr1 (112-232)||(9259184-9259305)
chr1 (134-235)||(20290319-20290420)
chr1 (117-234)||(12369950-12370058)
chr1 (133-235)||(51973462-51973565)
chr1 (118-223)||(30928388-30928494)
chr1 (117-233)||(12989874-12989991)
chr1 (117-229)||(16913581-16913694)
chr1 (118-226)||(18890556-18890665)
chr1 (109-200)||(41359001-41359094)
chr1 (117-233)||(20580931-20581049)
chr1 (112-233)||(17661067-17661189)
chr1 (110-203)||(32046891-32046985)
chr1 (109-234)||(41063211-41063337)
chr1 (109-233)||(13308820-13308945)
chr1 (127-235)||(46865275-46865384)
chr1 (117-235)||(11917808-11917926)
chr1 (117-233)||(22789593-22789708)
chr1 (109-190)||(12174810-12174891)
chr1 (126-234)||(13195614-13195723)
chr1 (127-233)||(12806836-12806944)
chr1 (117-182)||(13523013-13523078)
chr1 (109-232)||(17733954-17734079)
chr1 (109-233)||(39748947-39749072)
chr1 (110-233)||(45918904-45919028)
chr1 (145-234)||(18787912-18788001)
chr1 (117-228)||(26825262-26825374)
chr1 (131-229)||(16258490-16258589)
chr1 (125-235)||(29093552-29093663)
chr1 (109-219)||(49881058-49881168)
chr1 (119-223)||(6775911-6776015)
chr1 (109-203)||(9882070-9882162)
chr1 (109-159)||(25687355-25687405)
chr1 (117-183)||(14486684-14486749)
chr1 (180-224)||(25679967-25680011)
chr1 (109-157)||(30673508-30673556)
[»] scaffold0219 (1 HSPs)
scaffold0219 (109-234)||(19617-19743)
[»] scaffold0076 (1 HSPs)
scaffold0076 (109-234)||(26497-26623)
[»] scaffold0007 (4 HSPs)
scaffold0007 (109-234)||(3756-3882)
scaffold0007 (109-233)||(202788-202913)
scaffold0007 (166-233)||(274665-274733)
scaffold0007 (118-161)||(276207-276250)
[»] scaffold0001 (3 HSPs)
scaffold0001 (109-234)||(8109-8235)
scaffold0001 (109-234)||(21841-21967)
scaffold0001 (127-233)||(84335-84442)
[»] scaffold0603 (1 HSPs)
scaffold0603 (109-233)||(5979-6104)
[»] scaffold0014 (1 HSPs)
scaffold0014 (109-233)||(22225-22350)
[»] scaffold0006 (2 HSPs)
scaffold0006 (109-229)||(84678-84799)
scaffold0006 (117-233)||(120987-121104)
[»] scaffold0599 (1 HSPs)
scaffold0599 (109-232)||(7519-7643)
[»] scaffold0009 (3 HSPs)
scaffold0009 (125-232)||(182560-182668)
scaffold0009 (109-233)||(219650-219775)
scaffold0009 (109-233)||(215663-215781)
[»] scaffold0717 (1 HSPs)
scaffold0717 (109-236)||(915-1044)
[»] scaffold0240 (1 HSPs)
scaffold0240 (109-234)||(14989-15115)
[»] scaffold0128 (1 HSPs)
scaffold0128 (109-234)||(10662-10788)
[»] scaffold0047 (1 HSPs)
scaffold0047 (109-233)||(58596-58721)
[»] scaffold0019 (1 HSPs)
scaffold0019 (109-233)||(173458-173584)
[»] scaffold0058 (1 HSPs)
scaffold0058 (109-234)||(74540-74666)
[»] scaffold0108 (1 HSPs)
scaffold0108 (128-235)||(12685-12793)
[»] scaffold0062 (1 HSPs)
scaffold0062 (109-236)||(43931-44059)
[»] scaffold0002 (1 HSPs)
scaffold0002 (109-234)||(439977-440103)
[»] scaffold0035 (1 HSPs)
scaffold0035 (119-235)||(74715-74832)
[»] scaffold0087 (1 HSPs)
scaffold0087 (112-233)||(37787-37909)
[»] scaffold0023 (1 HSPs)
scaffold0023 (117-234)||(39702-39820)
[»] scaffold0069 (1 HSPs)
scaffold0069 (117-233)||(10180-10297)
[»] scaffold0161 (1 HSPs)
scaffold0161 (109-230)||(6809-6931)
[»] scaffold0011 (1 HSPs)
scaffold0011 (146-233)||(17617-17705)
[»] scaffold0655 (1 HSPs)
scaffold0655 (117-234)||(3161-3279)
[»] scaffold0184 (1 HSPs)
scaffold0184 (109-230)||(7470-7592)
[»] scaffold0502 (1 HSPs)
scaffold0502 (119-223)||(10916-11021)
[»] scaffold0554 (1 HSPs)
scaffold0554 (166-236)||(9881-9952)
[»] scaffold0284 (1 HSPs)
scaffold0284 (109-203)||(1549-1644)
[»] scaffold0211 (1 HSPs)
scaffold0211 (109-203)||(19168-19263)
[»] scaffold0114 (1 HSPs)
scaffold0114 (109-172)||(36316-36379)
[»] scaffold0024 (1 HSPs)
scaffold0024 (127-166)||(112360-112399)


Alignment Details
Target: chr4 (Bit Score: 320; Significance: 1e-180; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 18 - 427
Target Start/End: Original strand, 38619768 - 38620178
Alignment:
Q  18 aaaggaacttcaaaccatgcaacatttgatccggtgatgtgcttaccaataccatgttctttttcttcttacactactnnnnnnnnnnnnnttagtgaag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             ||||||| |    
T  38619768 aaaggaacttcaaaccatgcaacatttgatccggtgatgtgcttaccaataccatgttctttttcttcttacactactaaaaaaacaaaaattagtgagg 38619867  T
Q  118 gaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttt-tccgtcactaatttccctcactaattt 216  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||| |||||| | || ||||||||||| ||||||| ||||||||||| |||||||    
T  38619868 gaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaagaatttatgaggaatttcattttttccgtcattaatttccctcgctaattt 38619967  T
Q  217 tgctttttctagtagtgttattcttagaaatcatcgattgaaatggtgaatcagatgcatcttcactcacttatggattgcatgcaccttgatcaaatgc 316  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38619968 tgctttttctagtagtgttattcttaaaaatcaccgattgaaatggtgaatcagatgcatcttcactcacttatggattgcatgcaccttgatcaaatgc 38620067  T
Q  317 ctcaactgagttatcttgttgagttgcatccataaatgattcatgagacctaaactcattgtcatttgcatcaacaacaacccttgcaaagttagcaaca 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38620068 ctcaactgagttatcttgttgagttgcatccataaatgattcatgagacctaaactcattgtcatttgcatcaacaacaacccttgcaaagttagcaaca 38620167  T
Q  417 acgagaataat 427  Q
    |||||||||||    
T  38620168 acgagaataat 38620178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 19839191 - 19839316
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  19839191 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatttccct 19839290  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  19839291 cgctaattttgctttttctagtagtg 19839316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 109 - 236
Target Start/End: Complemental strand, 55309338 - 55309209
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat--ttttccgtcactaatttccc 206  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||  ||||||||||||||||||||    
T  55309338 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttccgtcactaatttccc 55309239  T
Q  207 tcactaattttgctttttctagtagtgtta 236  Q
    || |||||||||||||||||||||||||||    
T  55309238 tcgctaattttgctttttctagtagtgtta 55309209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 4586883 - 4586756
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||| || |||||||| |||||||||||||||||||||    
T  4586883 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgatcaaggaatttgtgaggaatttcattttttccgtcactaatttccct 4586784  T
Q  208 cactaattttgctttttctagtagtgtt 235  Q
    | ||||||||||||||||||||||||||    
T  4586783 cgctaattttgctttttctagtagtgtt 4586756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 25026569 - 25026696
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||    
T  25026569 ttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgagaaatttcattttttccgtcactaatttccct 25026668  T
Q  208 cactaattttgctttttctagtagtgtt 235  Q
    |||||||||| ||||||||| |||||||    
T  25026669 cactaattttactttttctaatagtgtt 25026696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 5473861 - 5473986
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcattttt-ccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||||| || || |||||||||||| |||||||||||||||||    
T  5473861 ttagtgagggaaaacgtaaaatccctctttaattccgtcactaaattttgcgaccaaggaattggtgaggaatttcatttttcccgtcactaatttccct 5473960  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  5473961 cgctaattttgctttttctagtagtg 5473986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 9670604 - 9670479
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||    
T  9670604 ttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 9670505  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | |||||||| |||||||||||||||    
T  9670504 cgctaatttttctttttctagtagtg 9670479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 32175862 - 32175736
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||| | ||||||||||||||||||||||    
T  32175862 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttattttttccgtcactaatttccct 32175763  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    |  ||||||||||||||||||||||||    
T  32175762 cgttaattttgctttttctagtagtgt 32175736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 112 - 236
Target Start/End: Complemental strand, 19680546 - 19680421
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcac 210  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||| || |||||||| |||||||||||||| |||||||||    
T  19680546 gtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaaattccctcac 19680447  T
Q  211 taattttgctttttctagtagtgtta 236  Q
    ||||||| ||||||||||||||||||    
T  19680446 taatttttctttttctagtagtgtta 19680421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 22168280 - 22168405
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||| |||||||||||||| |||||||||||||||||||||||||| | || ||||||| ||||||||||||||||||||||    
T  22168280 ttagtgagggaaaacatgaaattcctctctaattccggcactaaattttgcgaccaaggaatttatgaggaatttcattttttccgtcactaatttccct 22168379  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  22168380 cgctaattttgctttttctagtagtg 22168405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 38645762 - 38645887
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||| || ||||||| ||||||||||| ||||||||||    
T  38645762 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcaataatttccct 38645861  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  38645862 cgctaattttgctttttctagtagtg 38645887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 2275803 - 2275676
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||| |||||||||||||||||||||    
T  2275803 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccgtcactaatttccct 2275704  T
Q  208 cactaa-ttttgctttttctagtagtgt 234  Q
    | |||| ||||| |||||||||||||||    
T  2275703 cgctaatttttgttttttctagtagtgt 2275676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 12071974 - 12072100
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttttccg-tcactaatttccct 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |  |||||||||||| || ||||||||||| ||    
T  12071974 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgatcaaggaatttatgaagaatttcattttttcgatcactaatttcgct 12072073  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||||||||||||| ||||||    
T  12072074 cgctaattttgctttttctaatagtgt 12072100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 13028941 - 13028815
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| || |||| || |||||||||||||||||| |||    
T  13028941 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattgcattttttccgtcactaattttcct 13028842  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||| ||||||||||||||||||||    
T  13028841 cgctaagtttgctttttctagtagtgt 13028815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 13565040 - 13564914
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatt-tttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||||||||  ||||||||||||||| |  ||||||||| ||||||||||||||||||||    
T  13565040 ttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttatgaccaaggaatttgtgatgaatttcattatttccgtcactaatttccct 13564941  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||||||||||||||||||||    
T  13564940 cgctaattttgctttttctagtagtgt 13564914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 114 - 234
Target Start/End: Original strand, 44783499 - 44783621
Alignment:
Q  114 gaaggaaaacataaaatccctct-ctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcact 211  Q
    |||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||| ||    
T  44783499 gaaggaaaacatgaaatccctcttctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgct 44783598  T
Q  212 aattttgctttttctagtagtgt 234  Q
    | |||||||||||||||||||||    
T  44783599 agttttgctttttctagtagtgt 44783621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 7112071 - 7111946
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||  |||||||||||| |||||||||||||||||||| |||||||| ||||||| || |||||||| |||||||||||||||||||||    
T  7112071 ttagtgagggaaaatgtaaaatccctctataattccgtcactaaatttttcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccct 7111972  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  7111971 cgctaattttgctttttctagtagtg 7111946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 18051854 - 18051969
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | |||||||||||||||||||||||||||||||||||||  | ||||||| |||||||||| |||||||||||||||||||||||||    
T  18051854 gtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccgtgaaatttgtgagaaatttcattttttccgtcactaatttccctcac 18051953  T
Q  211 taattttgctttttct 226  Q
    ||||||||||||||||    
T  18051954 taattttgctttttct 18051969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 22128437 - 22128310
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||| | ||||||||||||||||||||||    
T  22128437 ttagtgagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagagattttattttttccgtcactaatttccct 22128338  T
Q  208 cactaattttgctttttctagtagtgtt 235  Q
    | || |||||| ||||||||||||||||    
T  22128337 ccctgattttgttttttctagtagtgtt 22128310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 46286351 - 46286228
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | |||||||||||||||||||||||||||||||||||||| | ||||||| || ||||| | |||||||||||||||||||| ||||    
T  46286351 gtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaattttattttttccgtcactaatttccgtcac 46286252  T
Q  211 taattttgctttttctagtagtgt 234  Q
    ||||||||||||||||||||||||    
T  46286251 taattttgctttttctagtagtgt 46286228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 112 - 233
Target Start/End: Complemental strand, 9059074 - 9058952
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcac 210  Q
    |||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| || ||||| ||||| |||||||||| |    
T  9059074 gtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgagaaattttatgttttcagtcacaaatttccctccc 9058975  T
Q  211 taattttgctttttctagtagtg 233  Q
    ||||||||||||| |||||||||    
T  9058974 taattttgcttttcctagtagtg 9058952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 112 - 233
Target Start/End: Complemental strand, 9238747 - 9238625
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcac 210  Q
    |||| ||||||| ||||||  |||||||||||||||||||||||||||||||||| ||||||| || |||||||| |||||||||||||||||||||| |    
T  9238747 gtgagggaaaacgtaaaatttctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccctcgc 9238648  T
Q  211 taattttgctttttctagtagtg 233  Q
    |||||||||||||| ||||||||    
T  9238647 taattttgctttttttagtagtg 9238625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 112 - 233
Target Start/End: Complemental strand, 27040147 - 27040025
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaattt-catttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | |||||||||||||||||||||||||||||||||||||| | ||||||| || ||||| | ||||||||||||||||||||||| |    
T  27040147 gtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaattttcttttttccgtcactaatttccctcgc 27040048  T
Q  211 taattttgctttttctagtagtg 233  Q
    |||||||||||||||||||||||    
T  27040047 taattttgctttttctagtagtg 27040025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 45532704 - 45532578
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||||||| |||||||||||| |||| ||||||| || |||||||| |||||||||||||||||||||    
T  45532704 ttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtcactaatttccct 45532605  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    |  ||||||||||||||||| ||||||    
T  45532604 cgttaattttgctttttctaatagtgt 45532578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 112 - 228
Target Start/End: Complemental strand, 37378745 - 37378628
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcac 210  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||| |||||||||| |||||| |||| |    
T  37378745 gtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcaataattttcctcgc 37378646  T
Q  211 taattttgctttttctag 228  Q
    ||||||||||||||||||    
T  37378645 taattttgctttttctag 37378628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 119 - 233
Target Start/End: Original strand, 18714924 - 18715039
Alignment:
Q  119 aaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatttt 217  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||| | ||||||||||||| ||||||||| ||||| ||    
T  18714924 aaaacgtaaaatccctctctaattccgtcactaaattttgagaccaaggaatttgtgaggaattttattttttccgtcacttatttccctcgctaatatt 18715023  T
Q  218 gctttttctagtagtg 233  Q
    ||||||||||||||||    
T  18715024 gctttttctagtagtg 18715039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 5399621 - 5399746
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| || ||||||||||| ||||| |||    
T  5399621 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaattttatgttttccgtcacaaattttcct 5399720  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | |||| ||||||||| |||||||||    
T  5399721 ccctaagtttgcttttcctagtagtg 5399746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 8878895 - 8879020
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||| | ||| |||| | ||||||||||||||||||||||    
T  8878895 ttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgcgaccaacgaatttctgagagattttattttttccgtcactaatttccct 8878994  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | || |||||||||||||| ||||||    
T  8878995 ctctgattttgctttttcttgtagtg 8879020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 29625337 - 29625462
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| | |||||||||||||||||||||||||||||||||||| | ||||||||| || ||||||| ||||||||||| ||||||||||    
T  29625337 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgactatggaatttgtgaggaatttcattttttccgtcattaatttccct 29625436  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||| || |||||    
T  29625437 cgctaattttgctttttatattagtg 29625462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 30507999 - 30508124
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| | ||||| ||||||  |||| |||    
T  30507999 ttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatttttttcgtcacagattttcct 30508098  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  30508099 cgctaattttgctttttctagtagtg 30508124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 54539298 - 54539423
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| ||||||| |||| ||||| ||||||||||||||||||| ||||||||||| || ||||||| |||||||||||||||||| |||    
T  54539298 ttagtgagggaaaacgtaaaatcactctttaattgcgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcct 54539397  T
Q  208 cactaattttgctttttctagtagtg 233  Q
      ||||||||||||||||||||||||    
T  54539398 tgctaattttgctttttctagtagtg 54539423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 117 - 236
Target Start/End: Original strand, 38223530 - 38223650
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatt 215  Q
    |||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||| |||||| ||||||    
T  38223530 ggaaaacgcaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtaaggaattttattttttccgtcactaatctccctccctaatt 38223629  T
Q  216 ttgctttttctagtagtgtta 236  Q
    || | ||||||||| ||||||    
T  38223630 ttacattttctagtggtgtta 38223650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 109 - 223
Target Start/End: Original strand, 25147733 - 25147848
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| || ||||| || ||||||||||  |||||||||    
T  25147733 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccgtcataaatttccct 25147832  T
Q  208 cactaattttgctttt 223  Q
    | ||||||||||||||    
T  25147833 ctctaattttgctttt 25147848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 125 - 234
Target Start/End: Complemental strand, 30269097 - 30268987
Alignment:
Q  125 taaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcactaattttgctttt 223  Q
    ||||||| |||||||||||||||||||||||||||||||||  ||||||  || |||||||| |||||||||||| ||||||||| ||||||||||||||    
T  30269097 taaaatctctctctaattccgtcactaaattttgcgaccaaataatttgcgaggaatttcattttttccgtcactgatttccctcgctaattttgctttt 30268998  T
Q  224 tctagtagtgt 234  Q
    |||||||||||    
T  30268997 tctagtagtgt 30268987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 125 - 234
Target Start/End: Original strand, 30283092 - 30283202
Alignment:
Q  125 taaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaattttgctttt 223  Q
    ||||||| |||||||||||||||||||||||||||||||||  ||||||  || ||||||| ||||||||||||| ||||||||| ||||||||||||||    
T  30283092 taaaatctctctctaattccgtcactaaattttgcgaccaaataatttgcgaggaatttcattttttccgtcactgatttccctcgctaattttgctttt 30283191  T
Q  224 tctagtagtgt 234  Q
    |||||||||||    
T  30283192 tctagtagtgt 30283202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 9239406 - 9239281
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| | |||||||||||||||||||||| | ||||||||||||||||||||||| || |||||||| |||||||||||||||||||||    
T  9239406 ttagtgagggaaaacgtgaaatccctctctaattccgtcattcaattttgcgaccaaggaatttgtgagcaatttcattttttccgtcactaatttccct 9239307  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    |  ||||||| || ||||| ||||||    
T  9239306 cgttaattttactctttcttgtagtg 9239281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 33914071 - 33914196
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||  ||||| | || ||||| || ||||||||||| |||||||||    
T  33914071 ttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgaggaattttatgttttccgtcacaaatttccct 33914170  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | |||||||||||||| |||||||||    
T  33914171 ccctaattttgcttttcctagtagtg 33914196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 109 - 232
Target Start/End: Complemental strand, 4627203 - 4627079
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||  ||||||| |||||||||| |||||||||||||| ||| |||| ||||||| || |||||||| |||||||||| ||||||||||    
T  4627203 ttagtgagggaaaatgtaaaatctctctctaatttcgtcactaaattttacgatcaagaaatttgtgaggaatttcattttttccgtcattaatttccct 4627104  T
Q  208 cactaattttgctttttctagtagt 232  Q
    | |||||||||||||||||||||||    
T  4627103 cgctaattttgctttttctagtagt 4627079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 109 - 203
Target Start/End: Complemental strand, 22156726 - 22156631
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaattt 203  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||| ||||||||||    
T  22156726 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcataatttccttcactaattt 22156631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 1638459 - 1638584
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||| |||| ||||||||||||||||||||||||||||| |||| ||| ||  |||| | ||||||||||||||||||||||    
T  1638459 ttagtgagggaaaacatgaaattcctccctaattccgtcactaaattttgcgaccaaagaatatgtgagggattttattttttccgtcactaatttccct 1638558  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||| |||| |||||||||    
T  1638559 ccctaattttgtttttcctagtagtg 1638584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 117 - 233
Target Start/End: Original strand, 36689697 - 36689814
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatt 215  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||  ||||| | |||||||||| ||||||| |||||||||||||||  |||||    
T  36689697 ggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgagaaatttcattttttccatcactaatttccctcgttaatt 36689796  T
Q  216 ttgctttttctagtagtg 233  Q
    ||| ||||||| ||||||    
T  36689797 ttgttttttcttgtagtg 36689814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 125 - 233
Target Start/End: Original strand, 42055425 - 42055534
Alignment:
Q  125 taaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaattttgctttt 223  Q
    ||||||| ||| |||||||||| ||||||||||||||||||||||||||| || ||||||| ||||| ||||||  ||||||||| ||||||||||||||    
T  42055425 taaaatcactcactaattccgttactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcgtcacagatttccctcgctaattttgctttt 42055524  T
Q  224 tctagtagtg 233  Q
    ||||||||||    
T  42055525 tctagtagtg 42055534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 117 - 232
Target Start/End: Complemental strand, 24682444 - 24682328
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatt 215  Q
    ||||||| | ||||||||||||||||||  |||||||||||||||||| ||||||||| || ||||| | ||||||||||| ||||||||||| ||||||    
T  24682444 ggaaaacgtgaaatccctctctaattccaccactaaattttgcgaccatggaatttgtgaggaattttattttttccgtcattaatttccctccctaatt 24682345  T
Q  216 ttgctttttctagtagt 232  Q
    || ||||||||||||||    
T  24682344 tttctttttctagtagt 24682328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 4606954 - 4606827
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttt-tccgtcactaatttccct 207  Q
    ||||||| ||||||  | ||||| |||||||||||||||||||||||||||| ||||| ||||||| | | |||| ||||| ||||||||||||||||||    
T  4606954 ttagtgagggaaaaagtgaaatcactctctaattccgtcactaaattttgcggccaagaaatttgtgacagattttattttgtccgtcactaatttccct 4606855  T
Q  208 cactaattttgctttttctagtagtgtt 235  Q
    | |||||||| ||||| |||||||||||    
T  4606854 ccctaattttacttttcctagtagtgtt 4606827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 109 - 203
Target Start/End: Original strand, 14944758 - 14944853
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaattt 203  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| ||||| ||||||||||||    
T  14944758 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttacgtcactaattt 14944853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 12105995 - 12106119
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||| ||||||||||||||||||||||| ||||||||||| |||||| | |||||||| | ||||||| ||| ||||||||||    
T  12105995 ttagtgagggaaaacatgaaacccctctctaattccgtcactaaa-tttgcgaccaaagaatttatgagaaattttattttttccatcaataatttccct 12106093  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | |||||||| ||||||||| |||||    
T  12106094 cgctaattttactttttctaatagtg 12106119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 118 - 233
Target Start/End: Complemental strand, 30420149 - 30420033
Alignment:
Q  118 gaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcattttt-ccgtcactaatttccctcactaattt 216  Q
    |||||||| |||| ||||||||||| |||||||||||  | |||||||| |||||||||  ||||| |||||| ||||||||||||| |||| |||||||    
T  30420149 gaaaacatgaaattcctctctaatttcgtcactaaatgcttcgaccaagtaatttgtaatgaattttattttttccgtcactaattttcctccctaattt 30420050  T
Q  217 tgctttttctagtagtg 233  Q
    |||||||||||||||||    
T  30420049 tgctttttctagtagtg 30420033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 16915381 - 16915508
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| |||||| || ||||| ||||||||||  |||||||||||||||||||||  ||||||| ||| |||| | ||||||| |||||||||| |||    
T  16915381 ttagtgagggaaaatatgaaatctctctctaattttgtcactaaattttgcgaccaacaaatttgtgagagattttattttttccatcactaattttcct 16915480  T
Q  208 cactaattttgctttttctagtagtgtt 235  Q
    | || |||||||||||||||||||||||    
T  16915481 ccctgattttgctttttctagtagtgtt 16915508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 30568121 - 30568006
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcac 210  Q
    |||| ||||||| ||||||| |||||||||||||||| |||||||| ||||||  |||||||| || |||||||| |||||||||||||||||| ||| |    
T  30568121 gtgagggaaaacgtaaaatctctctctaattccgtcattaaattttacgaccatagaatttgtgaggaatttcattttttccgtcactaatttcgctcgc 30568022  T
Q  211 taattttgctttttct 226  Q
    |||||||| |||||||    
T  30568021 taattttgttttttct 30568006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 117 - 233
Target Start/End: Original strand, 9913278 - 9913395
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatt 215  Q
    ||||||| | ||||||||||||||||| |||||||||||||||||||||| || |||| ||  |||| | |||||||||||||||||| |||| ||||||    
T  9913278 ggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaagaaaattgtgagggatttaattttttccgtcactaattttcctccctaatt 9913377  T
Q  216 ttgctttttctagtagtg 233  Q
    ||  ||||||||||||||    
T  9913378 ttaatttttctagtagtg 9913395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 112 - 203
Target Start/End: Complemental strand, 18744192 - 18744100
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaattt 203  Q
    |||| ||||||| | |||||||||||||||||||||||||||||||  ||||| | ||||||| ||||||||||| |||||||||||||||||    
T  18744192 gtgagggaaaacgtgaaatccctctctaattccgtcactaaattttatgaccatgaaatttgtgagaaatttcattttttccgtcactaattt 18744100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 109 - 232
Target Start/End: Original strand, 29238435 - 29238559
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| | ||||||||||||| || |||||||| ||||||||||||||  ||||| |||||||| ||| |||| | ||||||||||| ||||||||||    
T  29238435 ttagtgaggaaaaacataaaatctctatctaattctgtcactaaattttgaaaccaaagaatttgtgagagattttattttttccgtcaataatttccct 29238534  T
Q  208 cactaattttgctttttctagtagt 232  Q
    | ||| ||||| |||| ||||||||    
T  29238535 ccctagttttgtttttcctagtagt 29238559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 34557211 - 34557325
Alignment:
Q  125 taaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgt-aagaaatttcatttttccgtcactaatttccctcactaattttgctttt 223  Q
    |||||||  ||| ||||||||||| ||||||||| ||||||||||||||| ||| | |||  |||||||||||||||||| |||||||||||||   |||    
T  34557211 taaaatctgtctttaattccgtcattaaattttgtgaccaaggaatttgtgaaggattttattttttccgtcactaattttcctcactaattttatcttt 34557310  T
Q  224 tctagtagtgttatt 238  Q
     ||||||||| ||||    
T  34557311 cctagtagtggtatt 34557325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 45091286 - 45091398
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttttccgtcactaatttccctc 208  Q
    ||||||| ||||||| |||||||| ||||||||||||||||||||||||||||   ||||||||       ||    |||||||||||||||||||||||    
T  45091286 ttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcga--gaggaattt------cat----tttttccgtcactaatttccctc 45091373  T
Q  209 actaattttgctttttctagtagtg 233  Q
     ||||||||| ||||||||||||||    
T  45091374 gctaattttgttttttctagtagtg 45091398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 109 - 169
Target Start/End: Complemental strand, 37761967 - 37761907
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaa 169  Q
    ||||||| ||||||| | |||||||||||||||||||||||||||||||||||||| ||||    
T  37761967 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccacggaa 37761907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 234
Target Start/End: Original strand, 25225129 - 25225235
Alignment:
Q  127 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcactaattttgctttttc 225  Q
    ||||||||||||||||| || | |||||||||||| ||| |||||||  | | |||| || |||||||||| | ||||||||| |||||||| |||||||    
T  25225129 aaatccctctctaattctgttattaaattttgcgatcaaagaatttg--acagattttatattttccgtcattgatttccctccctaatttttctttttc 25225226  T
Q  226 tagtagtgt 234  Q
    |||||||||    
T  25225227 tagtagtgt 25225235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 203
Target Start/End: Original strand, 6553816 - 6553911
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaattt 203  Q
    ||||||| ||| ||||| ||||||||||||||||  || ||||||||||||||||||| ||||| | ||  |||| | ||||||||||||||||||    
T  6553816 ttagtgagggataacatgaaatccctctctaattatgttactaaattttgcgaccaagaaatttatgagggattttattttttccgtcactaattt 6553911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 233
Target Start/End: Original strand, 3613025 - 3613133
Alignment:
Q  127 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaa--gaaatttcatttttccgtcactaatttccctcactaattttgcttttt 224  Q
    |||| ||||||||||| |||||||||| |||||||||||||||||||| |  ||| ||   |||||  | ||| || ||||||| |||||||||||||||    
T  3613025 aaattcctctctaatttcgtcactaaaatttgcgaccaaggaatttgtgagggaatttattttttttagccaccaaattccctccctaattttgcttttt 3613124  T
Q  225 ctagtagtg 233  Q
    ||| |||||    
T  3613125 ctaatagtg 3613133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 226
Target Start/End: Original strand, 39234954 - 39235071
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca--tttttccgtcactaatttccc 206  Q
    |||| |||||||||| | |||||  |||||||||  || ||||||||||||||||||  ||||||| |||||||| |  ||||||||| || | ||||||    
T  39234954 ttagagaaggaaaacgtgaaatc--tctctaattttgttactaaattttgcgaccaaaaaatttgtgagaaattttatgtttttccgttacaagtttccc 39235051  T
Q  207 tcactaattttgctttttct 226  Q
    || ||||||||| |||||||    
T  39235052 tccctaattttggtttttct 39235071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 313611 - 313694
Alignment:
Q  121 aacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaattt 203  Q
    ||||| ||||||||||||||||  || |||||||||||||||||| |||||| | ||  |||| | ||||||||||||||||||    
T  313611 aacatgaaatccctctctaattatgttactaaattttgcgaccaaagaatttatgagggattttattttttccgtcactaattt 313694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 155
Target Start/End: Complemental strand, 4068787 - 4068749
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaatt 155  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  4068787 ggaaaacataaaattcctctctaattctgtcactaaatt 4068749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 120 - 233
Target Start/End: Original strand, 23104371 - 23104486
Alignment:
Q  120 aaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca--tttttccgtcactaatttccctcactaatttt 217  Q
    |||||| |||||||||||||||   ||| ||||||||||||||||  |||||||| |  ||||| |  |||||||||| || ||||   || ||||||||    
T  23104371 aaacatgaaatccctctctaatcatgtccctaaattttgcgaccatagaatttgtgatgaattttatttttttccgtccctgatttttgtccctaatttt 23104470  T
Q  218 gctttttctagtagtg 233  Q
    | |||| |||||||||    
T  23104471 gtttttcctagtagtg 23104486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 105; Significance: 3e-52; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 11938757 - 11938881
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttttccgtcactaatttccctc 208  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  11938757 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttccgtcactaatttccctc 11938856  T
Q  209 actaattttgctttttctagtagtg 233  Q
     ||||||||||||||||||||||||    
T  11938857 gctaattttgctttttctagtagtg 11938881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 3823145 - 3823271
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||    
T  3823145 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagaaatttcattttttccgtcactaatttccct 3823244  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||||||||||||| ||||||    
T  3823245 cgctaattttgctttttctaatagtgt 3823271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 8555429 - 8555304
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| || |||||||| |||||||||||||||||||||    
T  8555429 ttagtgagggaaaacataaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 8555330  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  8555329 cgctaattttgctttttctagtagtg 8555304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 109 - 236
Target Start/End: Original strand, 30687948 - 30688076
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||| |||||| ||||||||    
T  30687948 ttagtgaaggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttcggtcactgatttccct 30688047  T
Q  208 cactaattttgctttttctagtagtgtta 236  Q
    | |||||||||||||||||||||||||||    
T  30688048 cgctaattttgctttttctagtagtgtta 30688076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 19240882 - 19241005
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcac 210  Q
    |||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||| |    
T  19240882 gtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgc 19240981  T
Q  211 taattttgctttttctagtagtgt 234  Q
    ||||||||||||||||||||||||    
T  19240982 taattttgctttttctagtagtgt 19241005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 19314066 - 19314189
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcac 210  Q
    |||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||| |    
T  19314066 gtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgc 19314165  T
Q  211 taattttgctttttctagtagtgt 234  Q
    ||||||||||||||||||||||||    
T  19314166 taattttgctttttctagtagtgt 19314189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 19488186 - 19488060
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| |||||| || |||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||    
T  19488186 ttagtgagggaaaatatgaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 19488087  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||||||||||||||||||||    
T  19488086 cgctaattttgctttttctagtagtgt 19488060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 22939325 - 22939450
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||| || ||||||| |||||||||||||||||||| |    
T  22939325 ttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgacaaaggaatttgtgaggaatttcattttttccgtcactaatttcctt 22939424  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    ||||||||||||||||||||||||||    
T  22939425 cactaattttgctttttctagtagtg 22939450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 117 - 233
Target Start/End: Complemental strand, 24576141 - 24576024
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcactaatt 215  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||| ||||||    
T  24576141 ggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatt 24576042  T
Q  216 ttgctttttctagtagtg 233  Q
    ||||||||||||||||||    
T  24576041 ttgctttttctagtagtg 24576024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 43431684 - 43431559
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||| || |||||||| |||||||||||||||||||||    
T  43431684 ttagtgagggaaaacgtaaaatccctctctaatttcgtcactaaattttgcaaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 43431585  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    |||||||||| |||||||||||||||    
T  43431584 cactaatttttctttttctagtagtg 43431559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 19256224 - 19256350
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||| | ||||||||||||||||||||||    
T  19256224 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttattttttccgtcactaatttccct 19256323  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    |  ||||||||||||||||||||||||    
T  19256324 cgttaattttgctttttctagtagtgt 19256350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 23752411 - 23752285
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||    
T  23752411 ttagtgagggaaaatgtaaaatcactctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatatccct 23752312  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||||||||||||| ||||||    
T  23752311 cgctaattttgctttttctaatagtgt 23752285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 27869250 - 27869376
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||| || ||||||| ||||||| ||||||||||||||    
T  27869250 ttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccatcactaatttccct 27869349  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||||||||||||||||||||    
T  27869350 cgctaattttgctttttctagtagtgt 27869376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 33652579 - 33652705
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  33652579 ttagtgagggaaaacatgaaatccttctctaactccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 33652678  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | ||||||||||||||||| |||||||    
T  33652679 cgctaattttgctttttctggtagtgt 33652705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 17810310 - 17810435
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||| || ||||||| |||||||||||||||||| |||    
T  17810310 ttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaattttcct 17810409  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  17810410 cgctaattttgctttttctagtagtg 17810435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 17824741 - 17824616
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| || ||||| || ||||||||||| |||||||||    
T  17824741 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccgtcacaaatttccct 17824642  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  17824641 ctctaattttgctttttctagtagtg 17824616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 117 - 233
Target Start/End: Complemental strand, 27910881 - 27910764
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcactaatt 215  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||| || |||||||| |||||||||||||||||||||| ||||||    
T  27910881 ggaaaacatgaaatccctctctaattccgtcactaaattttgtgactaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatt 27910782  T
Q  216 ttgctttttctagtagtg 233  Q
    ||||||||||||||||||    
T  27910781 ttgctttttctagtagtg 27910764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 117 - 233
Target Start/End: Complemental strand, 27957300 - 27957183
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcactaatt 215  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||| || |||||||| |||||||||||||||||||||| ||||||    
T  27957300 ggaaaacatgaaatccctctctaattccgtcactaaattttgtgactaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatt 27957201  T
Q  216 ttgctttttctagtagtg 233  Q
    ||||||||||||||||||    
T  27957200 ttgctttttctagtagtg 27957183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 25273452 - 25273328
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttttccgtcactaatttccctc 208  Q
    ||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||| || | |||||||||| |||||||||||||||||    
T  25273452 ttagtgagggaaaacgtaaaatccctctctaattctgtcactaaattttgcgaccaaagaatttgtgaggactttcattttttcgtcactaatttccctc 25273353  T
Q  209 actaattttgctttttctagtagtg 233  Q
      |||||||||||||||||||||||    
T  25273352 gttaattttgctttttctagtagtg 25273328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 112 - 233
Target Start/End: Original strand, 4330993 - 4331115
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | |||| ||||||||||||||||||||||||||||||||| ||||||||| || ||||||| ||||||||||||||||||||||| |    
T  4330993 gtgagggaaaacgtgaaattcctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaatttccctcgc 4331092  T
Q  211 taattttgctttttctagtagtg 233  Q
    |||||||||||||||||||||||    
T  4331093 taattttgctttttctagtagtg 4331115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 13061056 - 13060930
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||| || |||||||| ||||||||||||||||| |||    
T  13061056 ttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttacct 13060957  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||||||||| ||||||||||    
T  13060956 cgctaattttgcttttgctagtagtgt 13060930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 117 - 234
Target Start/End: Complemental strand, 18010177 - 18010059
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcactaatt 215  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||| |||||||||||||||||| ||| ||||||    
T  18010177 ggaaaacatgaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccgtcactaatttctctcgctaatt 18010078  T
Q  216 ttgctttttctagtagtgt 234  Q
    ||||||||||| |||||||    
T  18010077 ttgctttttctggtagtgt 18010059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 21350490 - 21350616
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| | ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  21350490 ttagtgaggaaaaacgtaaaatccatctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 21350589  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
      || ||||||||||||||||||||||    
T  21350590 tgcttattttgctttttctagtagtgt 21350616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 112 - 233
Target Start/End: Complemental strand, 24193318 - 24193196
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcac 210  Q
    |||| ||||||||| ||||| |||||||||||||||||||||||||||||||| | ||||||| || |||||||| |||||||||||||||||||||| |    
T  24193318 gtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgc 24193219  T
Q  211 taattttgctttttctagtagtg 233  Q
    |||||||||||||||||||||||    
T  24193218 taattttgctttttctagtagtg 24193196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 112 - 233
Target Start/End: Complemental strand, 25655980 - 25655858
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcattttt-ccgtcactaatttccctcac 210  Q
    |||| ||||||| | |||||||||||||||||  ||||||||||||||||||| ||||||||| || |||||||||||| ||||||||||||||||||||    
T  25655980 gtgagggaaaacgtgaaatccctctctaattctatcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaatttccctcac 25655881  T
Q  211 taattttgctttttctagtagtg 233  Q
    |||||||||||||||||||||||    
T  25655880 taattttgctttttctagtagtg 25655858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 25000556 - 25000431
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| ||| ||||||||||||||||||||| ||||| |||||| ||||||||||| || |||||||| |||||||||||||||||||||    
T  25000556 ttagtgagggaaaacgtaacatccctctctaattccgtcacaaaattctgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttccct 25000457  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    |||||||||| |||||||||||||||    
T  25000456 cactaattttactttttctagtagtg 25000431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 32247921 - 32248046
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||| || ||||||| ||||||||||||||||||||||    
T  32247921 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatagaatttgtgaggaatttcattttttccgtcactaatttccct 32248020  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    |  |||||||||||||||||||||||    
T  32248021 cgttaattttgctttttctagtagtg 32248046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 24636664 - 24636791
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||| || ||||||| ||||||||||||||||||||||    
T  24636664 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtcactaatttccct 24636763  T
Q  208 cactaattttgct-ttttctagtagtgt 234  Q
    |  |||||||||| ||||||||||||||    
T  24636764 cgttaattttgctattttctagtagtgt 24636791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 29350935 - 29351061
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttttcc--gtcactaatttccc 206  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||| | ||||||| || |||||||||||| |  ||||||||||||||    
T  29350935 ttagtgagggaaaacatgaaatccctctctaattgcgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttctagtcactaatttccc 29351034  T
Q  207 tcactaattttgctttttctagtagtg 233  Q
    || ||||||||||||||||||||||||    
T  29351035 tcgctaattttgctttttctagtagtg 29351061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 17103990 - 17103864
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| || ||||| || ||||||||||| |||||| ||    
T  17103990 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccgtcacaaatttctct 17103891  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | ||||||||| |||||||||||||||    
T  17103890 ctctaattttgttttttctagtagtgt 17103864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 30467079 - 30466953
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||| | || ||||| | ||||||||||||||||||||||    
T  30467079 ttagtgagggaaaacgtaaaatctctctctaattccatcactaaattttgcgaccaagaaatttatgaggaattttaatttttccgtcactaatttccct 30466980  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||||||||||||||||||||    
T  30466979 cgctaattttgctttttctagtagtgt 30466953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 40289545 - 40289420
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||| |||    
T  40289545 ttagtgagggaaaacgtaaaatccctc-ctaattccgtcactaaattttgcgaccaaggaatttgtgagaaaattcattttttccgtcactaattttcct 40289447  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | ||||||||  |||||||||||||||    
T  40289446 cgctaattttaatttttctagtagtgt 40289420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 5670294 - 5670169
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||| || ||||||||||||||||||||||    
T  5670294 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattccattttttccgtcactaatttccct 5670195  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    |  | |||||| ||||||||| ||||    
T  5670194 cgttgattttgttttttctagcagtg 5670169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 6816508 - 6816383
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||| | ||||| | ||||||||||||||    
T  6816508 ttagtgagggaaaacatgaaatccctctctaattccgccactaaattttgcaaccaaggaatttgtgagaaattttatttttttcatcactaatttccct 6816409  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | |||||| ||||||| |||||||||    
T  6816408 cgctaattatgcttttcctagtagtg 6816383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 125 - 233
Target Start/End: Original strand, 8824853 - 8824962
Alignment:
Q  125 taaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaattttgctttt 223  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||| || ||||| | ||||||| ||||||||||||||| ||||||||||||||    
T  8824853 taaaatccctctctaattccgtcactaaattttgcgactaaggaatctgtgaggaatttgattttttccatcactaatttccctcgctaattttgctttt 8824952  T
Q  224 tctagtagtg 233  Q
    ||||||||||    
T  8824953 tctagtagtg 8824962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 127 - 234
Target Start/End: Complemental strand, 4647862 - 4647754
Alignment:
Q  127 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcactaattttgctttttc 225  Q
    |||||||||||||||||||||||||||||||||||| | | ||||||| || |||||||| |||||||||||||||||||||| ||||||||| ||||||    
T  4647862 aaatccctctctaattccgtcactaaattttgcgactatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgttttttc 4647763  T
Q  226 tagtagtgt 234  Q
    |||||||||    
T  4647762 tagtagtgt 4647754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 32961671 - 32961797
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||  |||||| |||||||||||||||||||||| |||||||||||| ||||||| || ||||||| |||||| |||||| ||||||||    
T  32961671 ttagtgagggaaaatgtaaaattcctctctaattccgtcactaaactttgcgaccaagaaatttgtgaggaatttcattttttctgtcactgatttccct 32961770  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | ||||||||||||||| |||||||||    
T  32961771 cgctaattttgctttttttagtagtgt 32961797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 6817066 - 6817191
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||  ||||||| |||||||||||||||||||||||||| ||||||| ||||||| || ||||||| ||||||||||||| |||| |||    
T  6817066 ttagtgagggaaaatgtaaaatctctctctaattccgtcactaaattttgtgaccaagaaatttgtgaggaatttcattttttccgtcactgattttcct 6817165  T
Q  208 cactaattttgctttttctagtagtg 233  Q
      ||||||||||||||||||||||||    
T  6817166 tgctaattttgctttttctagtagtg 6817191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 31399633 - 31399508
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| | |||||| ||||||||||||||||||||||||||||||| ||||||||| || |||||||| |||| | ||||||||||||||    
T  31399633 ttagtgagggaaaacgtgaaatccatctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcatttttttcatcactaatttccct 31399534  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    |  |||||||| ||||||||||||||    
T  31399533 cgttaattttgttttttctagtagtg 31399508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 127 - 233
Target Start/End: Complemental strand, 16062046 - 16061939
Alignment:
Q  127 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcattttt-ccgtcactaatttccctcactaattttgctttttc 225  Q
    ||||| ||||||||||||||||||| ||||||||||||  |||||||| || |||||||||||| |||||||||||||||||| |||||||| |||||||    
T  16062046 aaatcactctctaattccgtcactacattttgcgaccatagaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttactttttc 16061947  T
Q  226 tagtagtg 233  Q
    ||||||||    
T  16061946 tagtagtg 16061939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 10917839 - 10917965
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| | |||||||  |||||||||||||||||||||||||||||||| | |||| ||||| | || ||||| || ||||||||||| |||||||||    
T  10917839 ttagtgaggaaaaacatgcaatccctctctaattccgtcactaaattttgcaatcaagaaatttatgaggaattttatgttttccgtcacaaatttccct 10917938  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||||||||||||||||||||    
T  10917939 ccctaattttgctttttctagtagtgt 10917965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 26399132 - 26399007
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||| | ||||||||||||||||||||||    
T  26399132 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaacgaatttgtgagagattttattttttccgtcactaatttccct 26399033  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||| |||   ||||| ||||||||    
T  26399032 ccctattttacttttttttagtagtg 26399007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 130 - 233
Target Start/End: Original strand, 8789873 - 8789977
Alignment:
Q  130 tccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcactaattttgctttttctag 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||| || ||||| ||||| ||||| |||| |||||||||||||| ||||    
T  8789873 tccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttcagtcacaaattttcctccctaattttgcttttcctag 8789972  T
Q  229 tagtg 233  Q
    |||||    
T  8789973 tagtg 8789977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 112 - 231
Target Start/End: Complemental strand, 9915162 - 9915043
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcattttt-ccgtcactaatttccctcac 210  Q
    |||| ||||||| | ||||||||||||||| | |||||||||||||||||| | ||||||||| || |||||||||||| |||||||||||||| ||| |    
T  9915162 gtgagggaaaacgtgaaatccctctctaatcctgtcactaaattttgcgac-atggaatttgtgaggaatttcattttttccgtcactaatttctctcgc 9915064  T
Q  211 taattttgctttttctagtag 231  Q
    |||||||||||||||||||||    
T  9915063 taattttgctttttctagtag 9915043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 154 - 233
Target Start/End: Original strand, 25274654 - 25274734
Alignment:
Q  154 ttttgcgaccaaggaatttgtaagaaatttcatttt-tccgtcactaatttccctcactaattttgctttttctagtagtg 233  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  25274654 ttttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 25274734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 33413095 - 33412976
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||      ||||||||| || ||||||| ||||||||| ||||||||||||    
T  33413095 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgc------ggaatttgtgaggaatttcattttttccgttactaatttccct 33413002  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||| ||||||||||||||||    
T  33413001 cgctaatttt-ctttttctagtagtgt 33412976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 109 - 200
Target Start/End: Complemental strand, 19493781 - 19493688
Alignment:
Q  109 ttagtgaaggaaaacataaaa-tccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaa 200  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| || |||||||| ||||||||||||||    
T  19493781 ttagtgagggaaaacataaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaa 19493688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 117 - 233
Target Start/End: Original strand, 29345091 - 29345208
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttt-tccgtcactaatttccctcactaatt 215  Q
    ||||||| | ||||||||| ||||||||||||||||||||||| || ||| ||||||| | | |||| ||||| ||||||||||||||||||| ||||||    
T  29345091 ggaaaacgtgaaatccctccctaattccgtcactaaattttgccactaagaaatttgtgaaagattttattttttccgtcactaatttccctccctaatt 29345190  T
Q  216 ttgctttttctagtagtg 233  Q
    || |||||||||||||||    
T  29345191 tttctttttctagtagtg 29345208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 127 - 233
Target Start/End: Complemental strand, 21219347 - 21219240
Alignment:
Q  127 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcactaattttgctttttc 225  Q
    |||||||||||||||||| ||||||||||||||||||||  ||||| | || |||||||| |||||||||||||||||| ||| || ||||| |||||||    
T  21219347 aaatccctctctaattccatcactaaattttgcgaccaaaaaatttatgagtaatttcattttttccgtcactaatttctctcgctgatttttctttttc 21219248  T
Q  226 tagtagtg 233  Q
    ||||||||    
T  21219247 tagtagtg 21219240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 109 - 231
Target Start/End: Original strand, 37992111 - 37992234
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgt-aagaaatttcatttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||| |||||||||||||||||||||||||||||| || |||| ||| ||| | |||   ||||||||||||||||| |||    
T  37992111 ttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaagaatatgtgaaggattttatgttttccgtcactaattttcct 37992210  T
Q  208 cactaattttgctttttctagtag 231  Q
    | |||||||||||||| |||||||    
T  37992211 ccctaattttgcttttcctagtag 37992234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 117 - 234
Target Start/End: Original strand, 15251622 - 15251739
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatt 215  Q
    ||||||| | |||||| |||||||||| |||||||||||||||||||||  || | || ||| |||| | ||||||||||||||||||||||| ||||||    
T  15251622 ggaaaacgtgaaatccttctctaattctgtcactaaattttgcgaccaa-aaaatcgtgagagattttattttttccgtcactaatttccctccctaatt 15251720  T
Q  216 ttgctttttctagtagtgt 234  Q
    |||||||||| ||||||||    
T  15251721 ttgctttttcaagtagtgt 15251739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 18844669 - 18844543
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||||||||||||| ||||||||||||||||  || | ||||||||||||||||  ||||||| || ||||| || |||||| |||| |||| || |    
T  18844669 ttagtgaaggaaaacatgaaatccctctctaattttgttattaaattttgcgaccaaaaaatttgtgaggaattttatgttttccatcacaaattaccat 18844570  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||||||||| ||||||||||    
T  18844569 ccctaattttgcttttcctagtagtgt 18844543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 6084351 - 6084244
Alignment:
Q  127 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttttccgtcactaatttccctcactaattttgctttttct 226  Q
    ||||| |||||||||||||||||||||||||  ||||||||||||||  || | |||  ||||||||||||||||||  ||| |||||||||||||||||    
T  6084351 aaatctctctctaattccgtcactaaatttttagaccaaggaatttgggag-attttattttttccgtcactaatttatctccctaattttgctttttct 6084253  T
Q  227 agtagtgtt 235  Q
    | |||||||    
T  6084252 attagtgtt 6084244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 9631418 - 9631542
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattcc-gtcactaaattttgcgaccaaggaatttgtaagaaatttcatttt-tccgtcactaatttccctca 209  Q
    |||||||||||| | ||||  |||||||||||| |||||||||||||||||  |  |||||||| || ||||| ||||| |||||||||||||| |||      
T  9631418 gtgaaggaaaacgtgaaatttctctctaattcccgtcactaaattttgcgagtatagaatttgtgaggaattttattttttccgtcactaattttccttg 9631517  T
Q  210 ctaattttgctttttctagtagtgt 234  Q
    |||||||||||||||||||||||||    
T  9631518 ctaattttgctttttctagtagtgt 9631542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 148 - 234
Target Start/End: Complemental strand, 42700743 - 42700656
Alignment:
Q  148 actaaattttgcgaccaaggaatttgtaagaaatttcattttt-ccgtcactaatttccctcactaattttgctttttctagtagtgt 234  Q
    ||||||||||||||| ||||||||||| || |||||||||||| |||||||| |||| |||| |||||||| ||||||||||||||||    
T  42700743 actaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactgattttcctcgctaattttactttttctagtagtgt 42700656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 127 - 233
Target Start/End: Complemental strand, 31344279 - 31344172
Alignment:
Q  127 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaattttgctttttc 225  Q
    |||| ||||||||||||||||| |||||||||||| |||| ||||| | |||||||| | ||||||| |||||||||||| || |||||||| |||||      
T  31344279 aaattcctctctaattccgtcattaaattttgcgatcaagaaatttatgagaaatttgattttttccatcactaatttccttctctaattttacttttct 31344180  T
Q  226 tagtagtg 233  Q
    ||||||||    
T  31344179 tagtagtg 31344172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 190
Target Start/End: Original strand, 5879216 - 5879297
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcattttt 190  Q
    ||||||| | ||||| |||||| |||||||||||||||||||||||||| |||||||| ||||||| || ||||| ||||||    
T  5879216 ttagtgaggaaaaacgtaaaatgcctctctaattccgtcactaaattttacgaccaagaaatttgtgaggaattttattttt 5879297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 117 - 234
Target Start/End: Original strand, 17003282 - 17003400
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcattttt-ccgtcactaatttccctcactaatt 215  Q
    ||||||| ||||||  ||||||||| | |||| ||||||||| || |||||||||| | ||   ||| |||||| ||  ||||||||| |||| ||||||    
T  17003282 ggaaaacgtaaaattgctctctaatacagtcattaaattttgtgatcaaggaatttatgaggggttttattttttcccacactaattttcctccctaatt 17003381  T
Q  216 ttgctttttctagtagtgt 234  Q
    |||||||||||||||||||    
T  17003382 ttgctttttctagtagtgt 17003400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 226
Target Start/End: Original strand, 14304241 - 14304359
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcattttt-ccgtcactaatttccct 207  Q
    ||||||| |||||||   |||||||||| || ||| | |||||||||||  ||| | | ||||||  ||  ||||||||||| || ||||||||||||||    
T  14304241 ttagtgagggaaaacgcgaaatccctctttatttctggcactaaattttatgacgaggaaatttgcgagggatttcattttttccatcactaatttccct 14304340  T
Q  208 cactaattttgctttttct 226  Q
    | |||||||||||||||||    
T  14304341 cgctaattttgctttttct 14304359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 203
Target Start/End: Original strand, 15289679 - 15289749
Alignment:
Q  134 tctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttt-tccgtcactaattt 203  Q
    ||||||||||| |||||||||||| ||||||| |||||||| ||| |||| ||||| |||||| |||||||    
T  15289679 tctctaattccatcactaaattttacgaccaaagaatttgtgagagattttattttctccgtcgctaattt 15289749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 203
Target Start/End: Original strand, 15470048 - 15470118
Alignment:
Q  134 tctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttt-tccgtcactaattt 203  Q
    ||||||||||| |||||||||||| ||||||| |||||||| ||| |||| ||||| |||||| |||||||    
T  15470048 tctctaattccatcactaaattttacgaccaaagaatttgtgagagattttattttctccgtcgctaattt 15470118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 24479860 - 24479812
Alignment:
Q  186 tttttccgtcactaatttccctcactaattttgctttttctagtagtgt 234  Q
    |||||| |||||||||||||||| |||||| |||||||| |||||||||    
T  24479860 tttttctgtcactaatttccctctctaattatgctttttttagtagtgt 24479812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 152
Target Start/End: Original strand, 25651090 - 25651133
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaa 152  Q
    ||||||||||||||| |||| || ||||||||||||||||||||    
T  25651090 ttagtgaaggaaaacgtaaagtctctctctaattccgtcactaa 25651133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 203
Target Start/End: Complemental strand, 41527825 - 41527730
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaattt 203  Q
    ||||||| ||| ||||| ||||| ||| ||||||  || |||||||||||||| |||||||||| | ||  |||| | ||||||||||||||||||    
T  41527825 ttagtgagggataacatgaaatctctccctaattatgttactaaattttgcgatcaaggaatttatgagggattttattttttccgtcactaattt 41527730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 24479923 - 24479874
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttg 158  Q
    |||| |||||||||| | |||| |||||||||||| ||||||||||||||    
T  24479923 ttagagaaggaaaacgtgaaattcctctctaattctgtcactaaattttg 24479874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 2265474 - 2265383
Alignment:
Q  138 taattccgtcactaaattttgcgaccaaggaatttgt-aagaaatttcatttttccgtcactaatttccctcactaattttgctttttctagt 229  Q
    |||||| |||||||||||||| || ||| |||||||| ||| | |||  |||||||||||||||||| | || |||||||| ||||| |||||    
T  2265474 taattctgtcactaaattttgtgatcaaagaatttgtgaaggattttattttttccgtcactaattt-cgtccctaattttacttttcctagt 2265383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 238
Target Start/End: Original strand, 18844656 - 18844708
Alignment:
Q  187 ttttccgtcactaa-tttccctcactaattttgctttttctagtagtgttatt 238  Q
    |||||| ||||||| |||||||||||||||||  ||||| |||||||||||||    
T  18844656 ttttccttcactaaatttccctcactaatttttatttttttagtagtgttatt 18844708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 102; Significance: 2e-50; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 21917459 - 21917334
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||    
T  21917459 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 21917360  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    ||||||||||||||||||||||||||    
T  21917359 cactaattttgctttttctagtagtg 21917334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 22486408 - 22486533
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  22486408 ttagtgacggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 22486507  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  22486508 cgctaattttgctttttctagtagtg 22486533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 1842908 - 1843034
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  1842908 ttagtgagggaaaacgtaaaatccctccctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 1843007  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    |  ||||||||||||||||||||||||    
T  1843008 cgttaattttgctttttctagtagtgt 1843034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 3904603 - 3904477
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||  || |||||||| |||||||||||||||||||||    
T  3904603 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgcgaggaatttcattttttccgtcactaatttccct 3904504  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||||||||||||||||||||    
T  3904503 cgctaattttgctttttctagtagtgt 3904477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 3872312 - 3872187
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||| || |||||||| |||||||||||||||||||||    
T  3872312 ttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgagaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 3872213  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  3872212 cgctaattttgctttttctagtagtg 3872187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 18217843 - 18217968
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| | ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  18217843 ttagtgaggaaaaacgtaaaatccctctctaatttcgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 18217942  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  18217943 cgctaattttgctttttctagtagtg 18217968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 23232053 - 23232178
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||| || ||||||| ||||||||||||||||||||||    
T  23232053 ttagtgagggaaaacatgaaatccctttctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 23232152  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  23232153 ctctaattttgctttttctagtagtg 23232178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 23750861 - 23750736
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  23750861 ttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgagaaatttcattttttccgtcactaatttccct 23750762  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||| ||||||||||||||    
T  23750761 cgctaattttgttttttctagtagtg 23750736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 27806032 - 27806157
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||| |||||||||||||||||| |||    
T  27806032 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcactaattttcct 27806131  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  27806132 cgctaattttgctttttctagtagtg 27806157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 28800892 - 28801017
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| |||||| |||||||||||||||    
T  28800892 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttctgtcactaatttccct 28800991  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  28800992 cgctaattttgctttttctagtagtg 28801017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 6849336 - 6849211
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttt-tccgtcactaatttccct 207  Q
    ||||||| | ||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||    
T  6849336 ttagtgaggtaaaacgtaaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttctccgtcactaatttccct 6849237  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  6849236 cgctaattttgctttttctagtagtg 6849211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 7733437 - 7733312
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| | ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||    
T  7733437 ttagtgaggtaaaacatgaaatccctctctaattccgtctctaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 7733338  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||| ||||||||||||||||    
T  7733337 cgctaatttcgctttttctagtagtg 7733312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 31425636 - 31425511
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||| || |||||||| |||||||||||||||||||||    
T  31425636 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccacagaatttgtgaggaatttcattttttccgtcactaatttccct 31425537  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | |||||||||||||||||| |||||    
T  31425536 cgctaattttgctttttctaatagtg 31425511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 47523775 - 47523650
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||| |||||||||||||||||||||    
T  47523775 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 47523676  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||  ||||||||||||||    
T  47523675 cgctaattttattttttctagtagtg 47523650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 117 - 234
Target Start/End: Complemental strand, 2650945 - 2650827
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcactaatt 215  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||| || |||||||| |||||||||||||| ||||||||||||||    
T  2650945 ggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaaattccctcactaatt 2650846  T
Q  216 ttgctttttctagtagtgt 234  Q
    || ||||||||||||||||    
T  2650845 tttctttttctagtagtgt 2650827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 9698663 - 9698537
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatt-tttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||||||||  ||||||||||||||| |  ||||||||| ||||||||||||||||||||    
T  9698663 ttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttatgaccaaggaatttgtgatgaatttcattatttccgtcactaatttccct 9698564  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||||||||||||||||||||    
T  9698563 cgctaattttgctttttctagtagtgt 9698537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 15014530 - 15014404
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| || ||||| | |||||||||||| |||||||||    
T  15014530 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaattttattttttccgtcaccaatttccct 15014431  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||| ||||||||||||||||    
T  15014430 cgctaattttactttttctagtagtgt 15014404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 21623035 - 21623159
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||| || ||||||| ||||||||||||||||||||||    
T  21623035 ttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgcccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 21623134  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | || |||||||||||||||||||||    
T  21623135 cgct-attttgctttttctagtagtg 21623159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 33427704 - 33427829
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttttccgtcactaatttccctc 208  Q
    ||||||| ||||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||| || ||||||||||||  ||||||||||||||||    
T  33427704 ttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttggtcactaatttccctc 33427803  T
Q  209 actaattttgctttttctagtagtgt 234  Q
     ||||||||| |||||||||||||||    
T  33427804 gctaattttgttttttctagtagtgt 33427829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 4514779 - 4514906
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| |||||| || |||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| || ||||||||||| |||||||||    
T  4514779 ttagtgagggaaaatatgaaatccctctctaattccttcactaaattttgcgaccaaagaatttgtgagaaattttatgttttccgtcacaaatttccct 4514878  T
Q  208 cactaattttgctttttctagtagtgtt 235  Q
    | |||||||||||||| |||||||||||    
T  4514879 ccctaattttgcttttcctagtagtgtt 4514906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 11036524 - 11036647
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | |||||||||||||||||||||||||||||||||||||| | ||||||| || ||||||| ||||||||||||||||||||||  |    
T  11036524 gtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttcccttgc 11036623  T
Q  211 taattttgctttttctagtagtgt 234  Q
    ||||||||||||||||||||||||    
T  11036624 taattttgctttttctagtagtgt 11036647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 15969798 - 15969924
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca--tttttccgtcactaatttccc 206  Q
    ||||||| ||||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||| ||||||||||  |||||||||||||||| ||||    
T  15969798 ttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgagaaatttcatttttttccgtcactaatatccc 15969897  T
Q  207 tcactaattttgctttttctagtagtg 233  Q
    ||| ||||||| |||||||||||||||    
T  15969898 tcattaattttactttttctagtagtg 15969924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 37135407 - 37135284
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | ||||||||||||||||||||||||||||||| |||||| ||||||| | || |||||||| ||||||||||||||||||||||||    
T  37135407 gtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatggaatttatgaggaatttcattttttccgtcactaatttccctcac 37135308  T
Q  211 taattttgctttttctagtagtgt 234  Q
    |||||||| |||||||||||||||    
T  37135307 taattttgttttttctagtagtgt 37135284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 39979749 - 39979623
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| || ||||| || ||||||||||| |||||||||    
T  39979749 ttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccct 39979650  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||||||||| ||| ||||||    
T  39979649 ccctaattttgcttttcctaatagtgt 39979623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 23577314 - 23577189
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||| ||    
T  23577314 ttagtgagggaaaacgtgaaatccctatctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttctct 23577215  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | || ||||| |||||||||||||||    
T  23577214 cgctgatttttctttttctagtagtg 23577189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 24605852 - 24605977
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| | ||||| ||||||||||||||||||||||||||||||||| |||||||| || ||||||| ||||||||||||||||||||||    
T  24605852 ttagtgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 24605951  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | || ||||| |||||||||||||||    
T  24605952 cgctgatttttctttttctagtagtg 24605977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 112 - 235
Target Start/End: Original strand, 20174037 - 20174161
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | |||||||||||||||||||||||||||||||||||||| | ||||||| || ||||||| ||||||||||||||||||||||| |    
T  20174037 gtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgc 20174136  T
Q  211 taattttgctttttctagtagtgtt 235  Q
    ||||||||||||| || ||||||||    
T  20174137 taattttgcttttcctggtagtgtt 20174161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 1824325 - 1824198
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| |||||| || |||| ||||||||||||||||||||||||||||||||||| ||||||| || ||||| || ||||||||||| |||||||||    
T  1824325 ttagtgagggaaaatatgaaattcctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttatgttttccgtcacaaatttccct 1824226  T
Q  208 cactaattttgctttttctagtagtgtt 235  Q
    | |||||||||||||| |||||||||||    
T  1824225 ccctaattttgcttttcctagtagtgtt 1824198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 109 - 203
Target Start/End: Complemental strand, 10050961 - 10050866
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaattt 203  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  10050961 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaattt 10050866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 127 - 233
Target Start/End: Original strand, 23539264 - 23539371
Alignment:
Q  127 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaattttgctttttc 225  Q
    |||||||||||||||||||||| ||||||||||||| | ||||||||| || ||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  23539264 aaatccctctctaattccgtcattaaattttgcgactatggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttc 23539363  T
Q  226 tagtagtg 233  Q
    ||||||||    
T  23539364 tagtagtg 23539371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 40847560 - 40847434
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |  ||||| || ||||||||||| |||||||||    
T  40847560 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgacgaattttatgttttccgtcacaaatttccct 40847461  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||| ||||| ||||||||||    
T  40847460 ccctaattttacttttcctagtagtgt 40847434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 42926545 - 42926417
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat--ttttccgtcactaatttccc 206  Q
    ||||||| | ||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||| || ||||||||  ||||||||||||||||| ||    
T  42926545 ttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgactaagaaatttgtgaggaatttcatttttttccgtcactaattttcc 42926446  T
Q  207 tcactaattttgctttttctagtagtgtt 235  Q
    || ||||||||  ||||||||||||||||    
T  42926445 tcgctaattttattttttctagtagtgtt 42926417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 110 - 233
Target Start/End: Original strand, 1907370 - 1907494
Alignment:
Q  110 tagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctc 208  Q
    |||||| ||||||||| |||||||||||||||| |||||||||||||||||||||| |||| ||| ||  |||| | |||||||||||||||||||||||    
T  1907370 tagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatatgtgagggattttattttttccgtcactaatttccctc 1907469  T
Q  209 actaattttgctttttctagtagtg 233  Q
     |||||||||||||| |||||||||    
T  1907470 gctaattttgcttttcctagtagtg 1907494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 109 - 216
Target Start/End: Original strand, 36636520 - 36636628
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||| || ||||||||||| |||||||||    
T  36636520 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccct 36636619  T
Q  208 cactaattt 216  Q
    | |||||||    
T  36636620 ccctaattt 36636628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 20429482 - 20429605
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | ||||||||||||||||||||||||||||||| |||||| | ||||||| || ||||||| ||||||||||||||||||||||       
T  20429482 gtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttcccttgt 20429581  T
Q  211 taattttgctttttctagtagtgt 234  Q
    ||||||||||||||||||||||||    
T  20429582 taattttgctttttctagtagtgt 20429605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 26577279 - 26577405
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| || ||||| || ||||||||||| | |||||||    
T  26577279 ttagtgagggaaaacatgaaatccctctctaataccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaagtttccct 26577378  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
      |||||||||||||| | ||||||||    
T  26577379 tcctaattttgcttttcccagtagtgt 26577405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 20924083 - 20923958
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||||||||||||||| |||||||||||||| ||||||  ||||||||||| |||| | ||||||| ||||||||||||||    
T  20924083 ttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgtgaccaacaaatttgtaagagattttattttttccatcactaatttccct 20923984  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    |  ||||||| |||||||||||||||    
T  20923983 ccataattttactttttctagtagtg 20923958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 48933168 - 48933277
Alignment:
Q  127 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaattttgctttttc 225  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||| || ||||| | |||||||||||||||||| |||| ||||||||||||||||    
T  48933168 aaattcctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttattttttccgtcactaattttcctcgctaattttgctttttc 48933267  T
Q  226 tagtagtgtt 235  Q
    || |||||||    
T  48933268 taatagtgtt 48933277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 127 - 233
Target Start/End: Complemental strand, 23699932 - 23699825
Alignment:
Q  127 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcattttt-ccgtcactaatttccctcactaattttgctttttc 225  Q
    |||||||||| |||||| |||||||||||||||||||| | ||||||| || |||||||||||| |||||||||||||||||| |||||||| |||||||    
T  23699932 aaatccctctttaattctgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatttttctttttc 23699833  T
Q  226 tagtagtg 233  Q
    ||||||||    
T  23699832 tagtagtg 23699825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 117 - 231
Target Start/End: Original strand, 32267369 - 32267483
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttttccgtcactaatttccctcactaattt 216  Q
    |||||||  |||||||||||||||||| ||||||||||||||||| |||| ||||||| ||  |||| ||||||||||||||||| |||||| |||||||    
T  32267369 ggaaaacgcaaaatccctctctaattctgtcactaaattttgcgatcaagaaatttgtgagggattttatttttccgtcactaatctccctccctaattt 32267468  T
Q  217 tgctttttctagtag 231  Q
    ||| |||||||||||    
T  32267469 tgcattttctagtag 32267483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 117 - 233
Target Start/End: Complemental strand, 816308 - 816191
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaaga-aatttcatttttccgtcactaatttccctcactaatt 215  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||| ||| | |||  ||||||||||||||||||||||| |||| |    
T  816308 ggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagagattttgttttttccgtcactaatttccctccctaaat 816209  T
Q  216 ttgctttttctagtagtg 233  Q
    ||| |||||| |||||||    
T  816208 ttgttttttccagtagtg 816191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 117 - 234
Target Start/End: Complemental strand, 14786752 - 14786634
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcactaatt 215  Q
    ||||||| |||||| ||| | ||||||||||||||||||||||||||||  ||||||| || |||||||| ||||| ||||||||||| |||||||||||    
T  14786752 ggaaaacgtaaaattcctttttaattccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttctgtcactaattttcctcactaatt 14786653  T
Q  216 ttgctttttctagtagtgt 234  Q
    ||| |||||||| ||||||    
T  14786652 ttgttttttctaatagtgt 14786634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 110 - 203
Target Start/End: Original strand, 45664783 - 45664877
Alignment:
Q  110 tagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaattt 203  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||| |||||| |||||||||||    
T  45664783 tagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttctgtcactaattt 45664877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 134 - 233
Target Start/End: Original strand, 21871607 - 21871707
Alignment:
Q  134 tctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaattttgctttttctagtagt 232  Q
    ||||||||||||||||||||||||||||||||| ||||||| || ||||||| |||||||| |||| |||| |||| ||||||||| |||||||||||||    
T  21871607 tctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgccactgattttcctcgctaattttgttttttctagtagt 21871706  T
Q  233 g 233  Q
    |    
T  21871707 g 21871707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 109 - 232
Target Start/End: Original strand, 24140464 - 24140588
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| |||||||||||||||| |||| |||||||||| |||||||| ||||||| |||||||| || ||||| || ||||||||||| ||||| |||    
T  24140464 ttagtgagggaaaacataaaatccttctccaattccgtcattaaattttacgaccaaagaatttgtgaggaattttatattttccgtcacaaattttcct 24140563  T
Q  208 cactaattttgctttttctagtagt 232  Q
    | |||||||| ||||| ||||||||    
T  24140564 ccctaattttacttttcctagtagt 24140588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 117 - 236
Target Start/End: Original strand, 38057654 - 38057774
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatt 215  Q
    ||||||| | |||||||||| |||||||||||||||| |||||||||||||||||||| || ||||| | ||||||| |||||||||| ||||  | |||    
T  38057654 ggaaaacgtgaaatccctctttaattccgtcactaaactttgcgaccaaggaatttgtgaggaattttattttttccatcactaattttcctcgttgatt 38057753  T
Q  216 ttgctttttctagtagtgtta 236  Q
    ||||||||| |||||||||||    
T  38057754 ttgctttttgtagtagtgtta 38057774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 112 - 229
Target Start/End: Original strand, 2457687 - 2457803
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcac 210  Q
    |||| ||||||||| ||||||||||| |||||||||||||||||||||||| || ||||||||  || |||| || ||||| |||||||||||||||| |    
T  2457687 gtgagggaaaacatgaaatccctctcaaattccgtcactaaattttgcgacaaaagaatttgt--gagattttatattttctgtcactaatttccctccc 2457784  T
Q  211 taattttgctttttctagt 229  Q
    ||||||||||||| |||||    
T  2457785 taattttgcttttcctagt 2457803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 117 - 217
Target Start/End: Original strand, 31042273 - 31042374
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatt 215  Q
    ||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| | ||||||| | |||||||| |||| ||||||    
T  31042273 ggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagaaattttattttttccataactaattttcctctctaatt 31042372  T
Q  216 tt 217  Q
    ||    
T  31042373 tt 31042374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 36993834 - 36993959
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| | ||||||| ||||| || |||||||||||||||||||||| |||| ||| ||||||| || ||||| || |||||| |||| |||||||||    
T  36993834 ttagtgaggaaaaacatgaaatctctttctaattccgtcactaaattttacgactaagaaatttgtgaggaattttatattttccatcacaaatttccct 36993933  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | |||||||||||||| |||||||||    
T  36993934 ccctaattttgcttttcctagtagtg 36993959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 2093487 - 2093362
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcattttt-ccgtcactaatttccct 207  Q
    ||||||| ||||||| | ||||| ||||||||||||||||||||||||| ||| |||    ||| | || |||||||||||| |||||||||||||||||    
T  2093487 ttagtgagggaaaacgtcaaatctctctctaattccgtcactaaatttttcgatcaaattttttttgaggaatttcattttttccgtcactaatttccct 2093388  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | || ||||| |||||||||||||||    
T  2093387 cgctgatttttctttttctagtagtg 2093362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 129 - 229
Target Start/End: Original strand, 27304904 - 27305005
Alignment:
Q  129 atccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaattttgctttttcta 227  Q
    |||||||||||||||||||||||||||||||| |||||||||||||  |  |||| | |||||| |||||||||||||||| ||||||||| |||| |||    
T  27304904 atccctctctaattccgtcactaaattttgcggccaaggaatttgtgggggattttattttttctgtcactaatttccctccctaattttgtttttccta 27305003  T
Q  228 gt 229  Q
    ||    
T  27305004 gt 27305005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 117 - 224
Target Start/End: Original strand, 11852030 - 11852138
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatt 215  Q
    ||||||| | |||||| ||||||||||||||||||||||||| |||||| |||||||| ||| |||| | |||||| ||||| |||||| ||| ||||||    
T  11852030 ggaaaacctgaaatccttctctaattccgtcactaaattttgtgaccaaagaatttgtgagacattttattttttctgtcacaaatttctctccctaatt 11852129  T
Q  216 ttgcttttt 224  Q
    |||||||||    
T  11852130 ttgcttttt 11852138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 10222754 - 10222630
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    |||| ||| |||||| ||||||||||||||||||| |||| |||||||||||| |||  ||||| | |||||||| | |||||| ||||||||||| |||    
T  10222754 ttagagaaagaaaacgtaaaatccctctctaattctgtcattaaattttgcgatcaa-aaatttatgagaaattttactttttctgtcactaattttcct 10222656  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | |||||| || ||||||||||||||    
T  10222655 ccctaattatgttttttctagtagtg 10222630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 26415448 - 26415554
Alignment:
Q  119 aaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatttt 217  Q
    ||||| |||||||||||| ||||| |||||||||||||| ||| |||  ||||||| |||||||| | ||||||| |||||||||||| || ||||||||    
T  26415448 aaaacgtaaaatccctctttaatttcgtcactaaattttacgatcaaaaaatttgtgagaaattttattttttccatcactaatttccttctctaatttt 26415547  T
Q  218 gcttttt 224  Q
     ||||||    
T  26415548 acttttt 26415554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 117 - 225
Target Start/End: Original strand, 22501616 - 22501725
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatt 215  Q
    ||||||| | |||||||||||||||||||||| ||||||||||| |||| |||||||| | | |||| | |||||||||||||||||| | ||  |||||    
T  22501616 ggaaaacgtgaaatccctctctaattccgtcattaaattttgcggccaaagaatttgtgaaagattttattttttccgtcactaattttcatccttaatt 22501715  T
Q  216 ttgctttttc 225  Q
    |||| |||||    
T  22501716 ttgccttttc 22501725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 232
Target Start/End: Complemental strand, 1841889 - 1841784
Alignment:
Q  127 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttttccgtcactaatttccctcactaattttgctttttct 226  Q
    |||||||||||||||||| ||| |||||||||| | |||||||||||| ||  |||| |||||| | | ||||||||| ||  ||||||||||||||  |    
T  1841889 aaatccctctctaattccttcagtaaattttgcaatcaaggaatttgtgagggattttattttttcttaactaatttctcttcctaattttgcttttcat 1841790  T
Q  227 agtagt 232  Q
    ||||||    
T  1841789 agtagt 1841784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 15330306 - 15330249
Alignment:
Q  133 ctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcattttt 190  Q
    ||||||||||| |||||||||||||||||||||| ||||||| |||||||||| ||||    
T  15330306 ctctctaattctgtcactaaattttgcgaccaagaaatttgtgagaaatttcaatttt 15330249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 135 - 234
Target Start/End: Original strand, 27130372 - 27130472
Alignment:
Q  135 ctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcactaattttgctttttctagtagtg 233  Q
    |||||||||||||||||| ||||||||  || |||||||| ||  |||| || |||||| ||||| ||||| ||| | ||||||||||||||||||||||    
T  27130372 ctctaattccgtcactaacttttgcgattaacgaatttgtgaggcattttatattttccatcactgatttctctctcgaattttgctttttctagtagtg 27130471  T
Q  234 t 234  Q
    |    
T  27130472 t 27130472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 1822118 - 1821996
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| | ||||||| ||||| |||||||||||| ||| ||||||||  || | |||||||||| || ||||| || ||||||||||||||||   ||    
T  1822118 ttagtgaggaaaaacatgaaatctctctctaattccttcagtaaattttaagatcgaggaatttgtgaggaattttatattttccgtcactaatt---ct 1822022  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||  ||||||||    
T  1822021 ccctaattttgcttttcatagtagtg 1821996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 687891 - 688005
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttttccgtcactaatttccctc 208  Q
    ||||||| ||||||  |||||||| |||||||||| ||||||||| |||||||| |||||||||          |  ||||| ||||| | |||||||||    
T  687891 ttagtgagggaaaatgtaaaatccttctctaattctgtcactaaactttgcgacaaaggaattt----------tatttttttcgtcattgatttccctc 687980  T
Q  209 actaattttgctttttctagtagtg 233  Q
     ||||||||||||||||||||||||    
T  687981 gctaattttgctttttctagtagtg 688005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 232
Target Start/End: Complemental strand, 27132822 - 27132722
Alignment:
Q  133 ctctctaattccgtcactaaattttgcgaccaaggaatttgt-aagaaatttcatttttccgtcactaatttccctcactaattttgctttttctagtag 231  Q
    ||||||||||| ||||||||||||||| || ||  ||||||| | | | |||  ||||||||| || |||||||||| |||||||| |||||||||||||    
T  27132822 ctctctaattctgtcactaaattttgcaacaaacaaatttgtgatggattttattttttccgttaccaatttccctctctaattttactttttctagtag 27132723  T
Q  232 t 232  Q
    |    
T  27132722 t 27132722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 5106786 - 5106740
Alignment:
Q  180 atttcatttttccgtcactaatttccctcactaattttgctttttct 226  Q
    ||||| |||||| ||||||||||||||| ||||||||||||||||||    
T  5106786 atttcttttttctgtcactaatttcccttactaattttgctttttct 5106740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 203
Target Start/End: Complemental strand, 11890272 - 11890177
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaattt 203  Q
    ||||||| |||||| || | ||||||| |||| | ||||||||||||||| |||||| |||||| | ||  |||| | ||||||||||||||||||    
T  11890272 ttagtgagggaaaatatgatatccctcgctaacttcgtcactaaattttgagaccaaagaatttatgagggattttattttttccgtcactaattt 11890177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 38090355 - 38090402
Alignment:
Q  186 tttttccgtcactaatttccctcactaattttgctttttctagtagtg 233  Q
    |||||||||||| |||||||||| ||||||||||| || |||||||||    
T  38090355 tttttccgtcacaaatttccctccctaattttgctattcctagtagtg 38090402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 22486421 - 22486372
Alignment:
Q  187 ttttccgtcactaa-tttccctcactaattttgctttttctagtagtgtt 235  Q
    |||||||||||||| |||||||||||||||||  ||||| ||||||||||    
T  22486421 ttttccgtcactaaatttccctcactaatttttgtttttttagtagtgtt 22486372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 233
Target Start/End: Complemental strand, 25777229 - 25777112
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttt-tccgtcactaatttccctcactaatt 215  Q
    ||||||| | ||||| |||||||||| | |||||||||||| ||| |||  ||||||| ||  |||| ||||| |  ||||||||||| | || ||||||    
T  25777229 ggaaaacgtgaaatcactctctaatttcatcactaaattttacgatcaaaaaatttgtgagggattttattttattggtcactaattttcttccctaatt 25777130  T
Q  216 ttgctttttctagtagtg 233  Q
    || | |||||||||||||    
T  25777129 ttaccttttctagtagtg 25777112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 30908998 - 30908945
Alignment:
Q  180 atttcatttttccgtcactaatttccctcactaattttgctttttctagtagtg 233  Q
    |||| |||||| ||||||||||||  ||| |||||||||||||| |||||||||    
T  30908998 attttattttttcgtcactaatttttctctctaattttgcttttcctagtagtg 30908945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 101; Significance: 7e-50; HSPs: 90)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 110 - 233
Target Start/End: Original strand, 5260948 - 5261072
Alignment:
Q  110 tagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctc 208  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||    
T  5260948 tagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctc 5261047  T
Q  209 actaattttgctttttctagtagtg 233  Q
    |||||||||||||||||||||||||    
T  5261048 actaattttgctttttctagtagtg 5261072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 48404870 - 48404995
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  48404870 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 48404969  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  48404970 cgctaattttgctttttctagtagtg 48404995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 1745612 - 1745488
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttttccgtcactaatttccctc 208  Q
    ||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  1745612 ttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttccgtcactaatttccctc 1745513  T
Q  209 actaattttgctttttctagtagtg 233  Q
     ||||||||||||||| ||||||||    
T  1745512 gctaattttgctttttttagtagtg 1745488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 13921335 - 13921461
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||| |||    
T  13921335 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattttcct 13921434  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||||||||||||||||||||    
T  13921435 cgctaattttgctttttctagtagtgt 13921461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 23773487 - 23773612
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcattt-ttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||    
T  23773487 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttcttccgtcactaatttccct 23773586  T
Q  208 cactaattttgctttttctagtagtg 233  Q
     |||||||||| ||||||||||||||    
T  23773587 tactaattttgttttttctagtagtg 23773612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 26098823 - 26098948
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||| ||||||||||||||    
T  26098823 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccatcactaatttccct 26098922  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  26098923 cgctaattttgctttttctagtagtg 26098948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 27449098 - 27449223
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||| ||||||||||||||||||||||    
T  27449098 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 27449197  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  27449198 cgctaattttgctttttctagtagtg 27449223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 109 - 236
Target Start/End: Complemental strand, 13905163 - 13905035
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||| |||||||||||||||||| ||    
T  13905163 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttcgct 13905064  T
Q  208 cactaattttgctttttctagtagtgtta 236  Q
    | |||||||||||||||||||||||||||    
T  13905063 ctctaattttgctttttctagtagtgtta 13905035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 109 - 236
Target Start/End: Complemental strand, 19269989 - 19269861
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||    
T  19269989 ttagtgagggaaaacgtaaaatccctctttaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 19269890  T
Q  208 cactaattttgctttttctagtagtgtta 236  Q
    | |||||||||||||||||| ||||||||    
T  19269889 cgctaattttgctttttctaatagtgtta 19269861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 8110349 - 8110476
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||| ||||||||||||||||| |||||||| |||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  8110349 ttagtgagggaaaacgtaaaattcctctctaattccgtcattaaattttccgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 8110448  T
Q  208 cactaattttgctttttctagtagtgtt 235  Q
    ||||||||||||||||||||||||||||    
T  8110449 cactaattttgctttttctagtagtgtt 8110476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 117 - 233
Target Start/End: Complemental strand, 10941782 - 10941665
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcactaatt 215  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||| |||||||    
T  10941782 ggaaaacatgaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcccttactaatt 10941683  T
Q  216 ttgctttttctagtagtg 233  Q
    ||||||||||||||||||    
T  10941682 ttgctttttctagtagtg 10941665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 11007808 - 11007683
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |  |||||||| |||||||||||||||||||||    
T  11007808 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgacgaatttcattttttccgtcactaatttccct 11007709  T
Q  208 cactaattttgctttttctagtagtg 233  Q
     |||||||||||||||||||||||||    
T  11007708 tactaattttgctttttctagtagtg 11007683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 18091672 - 18091547
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| || |||||||| |||||||||||||||||||||    
T  18091672 ttagtgagggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactaatttccct 18091573  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||| ||||||||    
T  18091572 cgctaattttgctttttttagtagtg 18091547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 21816731 - 21816856
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  21816731 ttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 21816830  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | |||||||| |||||||||||||||    
T  21816831 cgctaatttttctttttctagtagtg 21816856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 29236054 - 29236179
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||| ||||||||||||||||||||||    
T  29236054 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaattttgtgagaaatttcattttttccgtcactaatttccct 29236153  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | |||||||||||||||||| |||||    
T  29236154 cgctaattttgctttttctaatagtg 29236179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 109 - 232
Target Start/End: Original strand, 11915768 - 11915892
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||    
T  11915768 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcatattttccgtcactaatttccct 11915867  T
Q  208 cactaattttgctttttctagtagt 232  Q
    | |||||||||||||||||||||||    
T  11915868 cgctaattttgctttttctagtagt 11915892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 1311084 - 1310957
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||| |||||||||||||||||| |||    
T  1311084 ttagtgatggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggattttcattttttccgtcactaattttcct 1310985  T
Q  208 cactaattttgctttttctagtagtgtt 235  Q
      ||||||||||||||||||||||||||    
T  1310984 tgctaattttgctttttctagtagtgtt 1310957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 25882580 - 25882706
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||| || ||||||| ||||||||||||||||||||||    
T  25882580 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 25882679  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||||||||||||| ||||||    
T  25882680 cgctaattttgctttttctaatagtgt 25882706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 112 - 236
Target Start/End: Complemental strand, 18104652 - 18104527
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcac 210  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| || ||||| | ||||||||||| ||||||||||| |    
T  18104652 gtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttaattttttccgtcaataatttccctcgc 18104553  T
Q  211 taattttgctttttctagtagtgtta 236  Q
    ||||||||||||||||||||||||||    
T  18104552 taattttgctttttctagtagtgtta 18104527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 117 - 233
Target Start/End: Original strand, 19223467 - 19223584
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatt 215  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||| |||||||||||| |||||||||| ||||||    
T  19223467 ggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcaccaatttccctcgctaatt 19223566  T
Q  216 ttgctttttctagtagtg 233  Q
    ||||||||||||||||||    
T  19223567 ttgctttttctagtagtg 19223584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 19610348 - 19610473
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||| || ||||||||||| |||||||||    
T  19610348 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccct 19610447  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | |||||||||||||| |||||||||    
T  19610448 ccctaattttgcttttcctagtagtg 19610473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 21020075 - 21020200
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||| |||| | ||||||||||||||||||||||    
T  21020075 ttagtgagggaaaacataaaatccttctctaattccgtcactaaattttgcaaccaaggaatttgtgagagattttattttttccgtcactaatttccct 21020174  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | |||||||||||||| |||||||||    
T  21020175 ccctaattttgcttttcctagtagtg 21020200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 21490159 - 21490034
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||| | ||||||||    
T  21490159 ttagtgagggaaaatgtaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcattgatttccct 21490060  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    ||||||||||| ||||||||||||||    
T  21490059 cactaattttgttttttctagtagtg 21490034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 112 - 236
Target Start/End: Complemental strand, 26390756 - 26390631
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcac 210  Q
    |||| ||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||| |||||||||||||||||| ||| |    
T  26390756 gtgagggataacatgaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccgtcactaatttctctcgc 26390657  T
Q  211 taattttgctttttctagtagtgtta 236  Q
    ||||||||||||||||||||||||||    
T  26390656 taattttgctttttctagtagtgtta 26390631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 43329888 - 43329763
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||  |||||||| |||||||||||||||||||||||| |||||||||||||||| || |||||||| |||||||||||||||||||||    
T  43329888 ttagtgagggaaaatgtaaaatccttctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 43329789  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  43329788 cgctaattttgctttttctagtagtg 43329763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 109 - 236
Target Start/End: Complemental strand, 15064117 - 15063989
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || ||||| || ||||||||||| |||||||||    
T  15064117 ttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccct 15064018  T
Q  208 cactaattttgctttttctagtagtgtta 236  Q
    | |||||||||||||| ||||||||||||    
T  15064017 ccctaattttgcttttcctagtagtgtta 15063989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 8428181 - 8428306
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  8428181 ttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 8428280  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||  ||||||||||||||    
T  8428281 cgctaattttattttttctagtagtg 8428306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 17762652 - 17762777
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  17762652 ttagtgagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 17762751  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||| | ||||||||||||    
T  17762752 cgctaattttgttctttctagtagtg 17762777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 19063972 - 19064097
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  19063972 ttagtgagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 19064071  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||| | ||||||||||||    
T  19064072 cgctaattttgttctttctagtagtg 19064097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 4393472 - 4393357
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | |||||||||||||||||||||||||||||||||||||  | ||||||| ||||||||||| ||||||||||||||||||||||||    
T  4393472 gtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccgtgaaatttgtgagaaatttcattttttccgtcactaatttccctcac 4393373  T
Q  211 taattttgctttttct 226  Q
    ||||||||||||||||    
T  4393372 taattttgctttttct 4393357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 112 - 233
Target Start/End: Original strand, 11219151 - 11219273
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | |||||||||||||||||||||| ||||||||||||| | ||||||||| |||||||||| ||||||||||||||||||||||| |    
T  11219151 gtgagggaaaacgtgaaatccctctctaattccgtcattaaattttgcgactatggaatttgtgagaaatttcattttttccgtcactaatttccctcgc 11219250  T
Q  211 taattttgctttttctagtagtg 233  Q
    |||||||| ||||||||||||||    
T  11219251 taattttgttttttctagtagtg 11219273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 112 - 233
Target Start/End: Original strand, 16299874 - 16299996
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcac 210  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||| || ||||||||||| |||||| ||| |    
T  16299874 gtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttcgctccc 16299973  T
Q  211 taattttgctttttctagtagtg 233  Q
    ||||||||||||| |||||||||    
T  16299974 taattttgcttttcctagtagtg 16299996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 127 - 233
Target Start/End: Complemental strand, 7623638 - 7623531
Alignment:
Q  127 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcactaattttgctttttc 225  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||| |||||||||||||||||||||| || ||||| |||||||    
T  7623638 aaatccctctctaattccgtcactaaattttgcgaccaaagaatctgtgagaaatttcattttttccgtcactaatttccctcgctgatttttctttttc 7623539  T
Q  226 tagtagtg 233  Q
    ||||||||    
T  7623538 tagtagtg 7623531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 9652591 - 9652714
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | |||||||||||||||||||||||||||||||||||| | | ||||||| || ||||||| ||||||||||||||||||||||| |    
T  9652591 gtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgactatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgc 9652690  T
Q  211 taattttgctttttctagtagtgt 234  Q
     |||||||||||||||||||||||    
T  9652691 caattttgctttttctagtagtgt 9652714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 10803730 - 10803860
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca--tttttccgtcactaatttccc 206  Q
    ||||||| ||||||| |||||| ||||| ||||||||||| ||||||||||||||||| ||||||| || |||||||  ||||||||||| |||||||||    
T  10803730 ttagtgagggaaaacgtaaaattcctctttaattccgtcattaaattttgcgaccaagaaatttgtgaggaatttcatttttttccgtcattaatttccc 10803829  T
Q  207 tcactaattttgctttttctagtagtgttat 237  Q
    || ||||||| ||||||||||||||||||||    
T  10803830 tccctaatttggctttttctagtagtgttat 10803860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 5565732 - 5565858
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| | ||||||||||||||||  |||||||||||||||||||||| ||||||| ||| |||| | ||||||||||||||||||||||    
T  5565732 ttagtgagggaaaacgtgaaatccctctctaattatgtcactaaattttgcgaccaagaaatttgtgagagattttattttttccgtcactaatttccct 5565831  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | || ||||||||||||||||||||||    
T  5565832 ccctgattttgctttttctagtagtgt 5565858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 109 - 238
Target Start/End: Complemental strand, 6088353 - 6088223
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||| ||||||||||||| | ||||||||| ||||||||||||| | || |||||||| |||||||||||||||||||||    
T  6088353 ttagtgagggaaaacgtaaaatccatctctaattccgttattaaattttgtgaccaaggaatttctgaggaatttcattttttccgtcactaatttccct 6088254  T
Q  208 cactaattttgctttttctagtagtgttatt 238  Q
     ||| ||||||||||||||||||||| ||||    
T  6088253 tacttattttgctttttctagtagtgatatt 6088223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 3461435 - 3461310
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||||||| |||||||||||| |||| ||||||| || ||||| | |||||| ||||||||||||| |    
T  3461435 ttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgatcaagaaatttgtgaggaattttattttttctgtcactaatttcctt 3461336  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  3461335 cgctaattttgctttttctagtagtg 3461310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 11837339 - 11837214
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||| || |||||||| |||||| |||| |||||||||    
T  11837339 ttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttccatcacgaatttccct 11837240  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||| ||||||||||||||    
T  11837239 cgctaattttgttttttctagtagtg 11837214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 29216002 - 29216127
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| || ||||| || ||||||||||| ||||| |||    
T  29216002 ttagtgagggaaaacatgaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaattttcct 29216101  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    |  ||||||||||||| |||||||||    
T  29216102 ccataattttgcttttcctagtagtg 29216127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 117 - 233
Target Start/End: Original strand, 31250106 - 31250223
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatt 215  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||| | |||||||||||||||| | |||| ||||||    
T  31250106 ggaaaacacaaaatccctctctaattctgtcactaaattttgcgaccaagaaatttgtaaggaattttattttttccgtcactaatcttcctccctaatt 31250205  T
Q  216 ttgctttttctagtagtg 233  Q
    |||| |||||||||||||    
T  31250206 ttgcattttctagtagtg 31250223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 46012853 - 46012728
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||||||||||||||  ||||||||||||||||| |||||||||||| ||| |||| | |||||||||||||||||| |||    
T  46012853 ttagtgagggaaaacatgaaatccctctctaattttgtcactaaattttgcgatcaaggaatttgtgagagattttattttttccgtcactaattttcct 46012754  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | || |||||||||||||||||||||    
T  46012753 ccctgattttgctttttctagtagtg 46012728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 127 - 234
Target Start/End: Original strand, 8546273 - 8546381
Alignment:
Q  127 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaattttgctttttc 225  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||| || ||||||| |||||||||||||||||| |||| ||||||||||||||||    
T  8546273 aaatccctctctaattccgtcactaaattttgcgatcatggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttc 8546372  T
Q  226 tagtagtgt 234  Q
    | |||||||    
T  8546373 tggtagtgt 8546381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 109 - 236
Target Start/End: Original strand, 30219348 - 30219476
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||  ||||| | || ||||| || ||||||||||| |||||||||    
T  30219348 ttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgaggaattttatgttttccgtcacaaatttccct 30219447  T
Q  208 cactaattttgctttttctagtagtgtta 236  Q
    | |||||||||||||| ||||||||||||    
T  30219448 ccctaattttgcttttcctagtagtgtta 30219476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 18539817 - 18539932
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | |||||||||||||||||||||||||||||||||||||| | ||||| | || ||||||| ||||||||||||||||||||||| |    
T  18539817 gtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttttgaggaatttcattttttccgtcactaatttccctctc 18539916  T
Q  211 taattttgctttttct 226  Q
    ||||||||||||||||    
T  18539917 taattttgctttttct 18539932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 127 - 233
Target Start/End: Original strand, 29956400 - 29956507
Alignment:
Q  127 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaattttgctttttc 225  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||| || ||||||| ||||||| ||||||||||||||| |||||||| |||||||    
T  29956400 aaatccctttctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccatcactaatttccctcgctaattttactttttc 29956499  T
Q  226 tagtagtg 233  Q
    ||||||||    
T  29956500 tagtagtg 29956507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 127 - 233
Target Start/End: Original strand, 30005555 - 30005662
Alignment:
Q  127 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaattttgctttttc 225  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||| || ||||||| ||||||| ||||||||||||||| |||||||| |||||||    
T  30005555 aaatccctttctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccatcactaatttccctcgctaattttactttttc 30005654  T
Q  226 tagtagtg 233  Q
    ||||||||    
T  30005655 tagtagtg 30005662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 5744426 - 5744551
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||| ||  |||| || ||||||||||| ||||| |||    
T  5744426 ttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggcattttatgttttccgtcacaaattttcct 5744525  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | |||||||||||||| |||||||||    
T  5744526 ccctaattttgcttttcctagtagtg 5744551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 5781385 - 5781510
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||| ||  |||| || ||||||||||| ||||| |||    
T  5781385 ttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggcattttatgttttccgtcacaaattttcct 5781484  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | |||||||||||||| |||||||||    
T  5781485 ccctaattttgcttttcctagtagtg 5781510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 112 - 233
Target Start/End: Original strand, 8543482 - 8543603
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttttccgtcactaatttccctcact 211  Q
    |||| ||||||| | |||||||||||||||||||||| ||||||||||||||| | || |||| || |||||||||||||| ||||||||||||||| ||    
T  8543482 gtgagggaaaacgtgaaatccctctctaattccgtcattaaattttgcgaccatgaaacttgttaggaatttcatttttccatcactaatttccctcgct 8543581  T
Q  212 aattttgctttttctagtagtg 233  Q
    ||||||| |||||||| |||||    
T  8543582 aattttgttttttctaatagtg 8543603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 109 - 217
Target Start/End: Original strand, 28859601 - 28859710
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| | ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||| |||||||||||||||||| |||    
T  28859601 ttagtgaggtaaaacgtaaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaatttcattttttccgtcactaattttcct 28859700  T
Q  208 cactaatttt 217  Q
    | ||||||||    
T  28859701 cgctaatttt 28859710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 109 - 203
Target Start/End: Original strand, 19545520 - 19545615
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaattt 203  Q
    ||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||    
T  19545520 ttagtgaggaaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 19545615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 28389983 - 28390105
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| | |||||| |||||||||||||||||||||||||||||||| |||||||| ||| |||| | |||||||||||||||||| |||    
T  28389983 ttagtgagggaaaacgtgaaatccttctctaattccgtcactaaattttgcgaccaacgaatttgtgagagattttattttttccgtcactaattttcct 28390082  T
Q  208 cactaattttgctttttctagta 230  Q
    | || ||||| ||||||||||||    
T  28390083 ctctgattttactttttctagta 28390105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 112 - 233
Target Start/End: Original strand, 36543762 - 36543884
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcac 210  Q
    |||| ||||||||| |||||||||||||||| |||||||||||||||||||||| |||| ||| ||| |||| | ||||||| |||||||||| |||| |    
T  36543762 gtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatctgtgagagattttattttttccatcactaattttcctccc 36543861  T
Q  211 taattttgctttttctagtagtg 233  Q
    ||||||| |||||||||||||||    
T  36543862 taatttttctttttctagtagtg 36543884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 21088762 - 21088886
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttttccgtcactaatttccctc 208  Q
    ||||||| ||||||||| ||||||||||| ||||||||||  |||||||||||||||||||||||| || | |||  |||||||||||||||||||||||    
T  21088762 ttagtgagggaaaacatgaaatccctctcgaattccgtcatcaaattttgcgaccaaggaatttgtgag-attttattttttccgtcactaatttccctc 21088860  T
Q  209 actaattttgctttttctagtagtgt 234  Q
     |||| |||||||||  |||||||||    
T  21088861 cctaactttgcttttcttagtagtgt 21088886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 50665761 - 50665636
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||||||||| |||||||||||||||||| ||| |||||||| || ||||| || ||||||||||  |||||||||    
T  50665761 ttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgatcaaagaatttgtgaggaattttatgttttccgtcataaatttccct 50665662  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||  ||||||||    
T  50665661 ctctaattttgcttttcttagtagtg 50665636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 127 - 234
Target Start/End: Complemental strand, 11085449 - 11085341
Alignment:
Q  127 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcactaattttgctttttc 225  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| | || |||||||| |||||||| ||| ||||| ||| |||||||| |||||||    
T  11085449 aaatccctctctaattccgtcactaaattttgcgaccaaagaatttatgaggaatttcattttttccgttactgatttctctcgctaattttactttttc 11085350  T
Q  226 tagtagtgt 234  Q
    |||||||||    
T  11085349 tagtagtgt 11085341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 109 - 232
Target Start/End: Original strand, 27968925 - 27969049
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcattt-ttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||  ||  ||| ||| |||| |||| |||||||||||||||||||    
T  27968925 ttagtgagggaaaacatgaaatccctctctaattctgtcattaaattttgcgaccaacaaaggtgtgagagattttatttgttccgtcactaatttccct 27969024  T
Q  208 cactaattttgctttttctagtagt 232  Q
    | || ||||||||||||||||||||    
T  27969025 ccctgattttgctttttctagtagt 27969049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 139 - 233
Target Start/End: Complemental strand, 20762045 - 20761950
Alignment:
Q  139 aattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcattttt-ccgtcactaatttccctcactaattttgctttttctagtagtg 233  Q
    ||||| |||||||||||||||||||||||||||||| ||| |||| |||||| |||||||||||||||||| || |||||||||||||||||||||    
T  20762045 aattctgtcactaaattttgcgaccaaggaatttgtgagagattttattttttccgtcactaatttccctccctgattttgctttttctagtagtg 20761950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 127 - 233
Target Start/End: Original strand, 37283551 - 37283658
Alignment:
Q  127 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcactaattttgctttttc 225  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||| || ||||| || ||||||||||| |||||||||| |||||||||||||| |    
T  37283551 aaatccctctctaattccgtcactaaattttatgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccctccctaattttgcttttcc 37283650  T
Q  226 tagtagtg 233  Q
    || |||||    
T  37283651 taatagtg 37283658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 29451104 - 29451230
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| ||||||||||||||||||||||| | ||||||||| ||  |||||||| | |||||||||| ||||||||||||||||||||||    
T  29451104 ttagtgagggaaaacgtaaaatccctctctaattccgtcccaaaattttgcaactgaggaatttatgagaaatttcattttttccgtcactaatttccct 29451203  T
Q  208 cactaattttg-ctttttctagtagtg 233  Q
    |  ||||||||  ||||||||||||||    
T  29451204 cgttaattttgtttttttctagtagtg 29451230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 17269729 - 17269604
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| | |||| || ||||||||||||||||||||||||||||||||||| ||| |||||||| || ||||| | ||||||| ||  |||||||| |    
T  17269729 ttagtgaggaaaaatatgaaatccctctctaattccgtcactaaattttgcgatcaaagaatttgtgaggaattttattttttccatcgttaatttccat 17269630  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  17269629 cgctaattttgctttttctagtagtg 17269604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 125 - 233
Target Start/End: Original strand, 18380050 - 18380159
Alignment:
Q  125 taaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaattttgctttt 223  Q
    |||||||||||| |||||||||||||||||||| ||| |||| ||||||| |  ||||||| ||||||||||||| ||||||||| |||||||| |||||    
T  18380050 taaaatccctctttaattccgtcactaaattttacgatcaagaaatttgtgaagaatttcattttttccgtcactgatttccctcgctaattttactttt 18380149  T
Q  224 tctagtagtg 233  Q
    ||||||||||    
T  18380150 tctagtagtg 18380159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 117 - 233
Target Start/End: Original strand, 31433755 - 31433872
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatt 215  Q
    ||||||| | |||| |||||||||||||||||||||||||| |||||||||||||||| |||||||| | ||||||  ||||||||||||||  ||||||    
T  31433755 ggaaaacgtgaaattcctctctaattccgtcactaaattttacgaccaaggaatttgtgagaaattttattttttctatcactaatttccctatctaatt 31433854  T
Q  216 ttgctttttctagtagtg 233  Q
    || |||||| ||||||||    
T  31433855 ttactttttttagtagtg 31433872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 49915461 - 49915586
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||| ||  |||| || ||||||||||| |||||||||    
T  49915461 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgactaagaaatttgttagggattttatgttttccgtcacaaatttccct 49915560  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    |  ||||||| |||||  ||||||||    
T  49915561 ctttaattttacttttcttagtagtg 49915586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 117 - 233
Target Start/End: Complemental strand, 26830559 - 26830441
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca--tttttccgtcactaatttccctcactaat 214  Q
    ||||||| | ||||||||||||||||||||||| |||||||||||||| ||||||||| || ||||| |  ||||||||||| |||||| |||| |||||    
T  26830559 ggaaaacgtgaaatccctctctaattccgtcacaaaattttgcgaccatggaatttgtgaggaattttatttttttccgtcattaattttcctccctaat 26830460  T
Q  215 tttgctttttctagtagtg 233  Q
    ||| ||||||||| |||||    
T  26830459 ttttctttttctaatagtg 26830441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 118 - 224
Target Start/End: Complemental strand, 29704148 - 29704041
Alignment:
Q  118 gaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcactaattt 216  Q
    |||||| | |||||||||| |||||||||||||||||||||||| ||   ||||||| || |||||||| |||||||||||||||||||||| |||||||    
T  29704148 gaaaacgtgaaatccctctttaattccgtcactaaattttgcgatcataaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattt 29704049  T
Q  217 tgcttttt 224  Q
    ||||||||    
T  29704048 tgcttttt 29704041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 117 - 234
Target Start/End: Original strand, 46942505 - 46942623
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatt 215  Q
    ||||||| | ||||||||||||||||| |||||||||||||||||||||| || |||| ||  |||| | |||||| ||||||||||||| || ||||||    
T  46942505 ggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaagaaaattgtgagggatttaattttttctgtcactaatttccttccctaatt 46942604  T
Q  216 ttgctttttctagtagtgt 234  Q
    ||| |||||||||||||||    
T  46942605 ttgatttttctagtagtgt 46942623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 117 - 233
Target Start/End: Complemental strand, 23217325 - 23217208
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatt 215  Q
    ||||||| | |||||||||||||||||||||||||||||||| |||||  |||||||| || ||||| | ||||||| ||| ||||||||||| ||||||    
T  23217325 ggaaaacgtgaaatccctctctaattccgtcactaaattttgggaccatagaatttgtgaggaatttgattttttccctcattaatttccctccctaatt 23217226  T
Q  216 ttgctttttctagtagtg 233  Q
    || |||||| ||||||||    
T  23217225 tttctttttttagtagtg 23217208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 47263390 - 47263265
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| ||||||  || ||||| || |||||||||||||||||||||||||||||| || ||||| | |||||| ||||| ||||||| |    
T  47263390 ttagtgagggaaaacgtaaaatttctatctaactctgtcactaaattttgcgaccaaggaatttgtgaggaatttaattttttctgtcaccaatttcctt 47263291  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    |  |||||||||||||||||||||||    
T  47263290 cgttaattttgctttttctagtagtg 47263265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 112 - 203
Target Start/End: Complemental strand, 17582423 - 17582331
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaattt 203  Q
    |||| ||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||| || ||||| | ||||||||||||||||||    
T  17582423 gtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttattttttccgtcactaattt 17582331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 109 - 228
Target Start/End: Complemental strand, 26963374 - 26963254
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||  |||||| ||||||||||||||| |||||||||| | ||||| | |||||||| ||||||||| |||| ||||||||||||||||    
T  26963374 ttagtgagggaaaatgtaaaattcctctctaattccgttactaaattttacaaccaaagtatttgtaaaaaatttcattttttacgtcactaatttccct 26963275  T
Q  208 cactaattttgctttttctag 228  Q
    |  |||||||| |||||||||    
T  26963274 cgttaattttgttttttctag 26963254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 117 - 230
Target Start/End: Original strand, 1628233 - 1628347
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatt 215  Q
    ||||||| | |||||||||||||||| |||||||||||||| |||| ||||||||| | || ||||| | ||||||| ||| ||||||||||| ||||||    
T  1628233 ggaaaacgtgaaatccctctctaatttcgtcactaaattttacgactaaggaatttatgaggaattttattttttccatcattaatttccctccctaatt 1628332  T
Q  216 ttgctttttctagta 230  Q
    || ||||||||||||    
T  1628333 ttactttttctagta 1628347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 112 - 233
Target Start/End: Complemental strand, 36564561 - 36564439
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcac 210  Q
    |||| ||||| ||| |||||||||||||||| |||||||||||| ||||||||| |||| ||| ||  |||| | ||||||| |||||||||| |||| |    
T  36564561 gtgagggaaagcatgaaatccctctctaatttcgtcactaaattctgcgaccaaagaatctgtcagggattttattttttccatcactaattttcctccc 36564462  T
Q  211 taattttgctttttctagtagtg 233  Q
    ||||||| |||||||||||||||    
T  36564461 taatttttctttttctagtagtg 36564439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 27182781 - 27182657
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttttccgtcactaatttccctc 208  Q
    ||||||| ||||||||  ||||| |||||||||| ||||||||||| ||| |||||||| |||||| ||  |||| ||||||  ||||||||||||||||    
T  27182781 ttagtgagggaaaacaagaaatctctctctaatttcgtcactaaatcttgtgaccaagggatttgtgagggattttattttt-tgtcactaatttccctc 27182683  T
Q  209 actaattttgctttttctagtagtgt 234  Q
     ||||||||| |||| ||||||||||    
T  27182682 cctaattttgtttttcctagtagtgt 27182657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 112 - 203
Target Start/End: Original strand, 6718723 - 6718815
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaattt 203  Q
    |||| ||||||| | |||||||| ||||||||||||||||||||||||||||| | ||||||| || ||||||| ||||||||||||||||||    
T  6718723 gtgagggaaaacgtgaaatccctttctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 6718815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 10772179 - 10772053
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca--tttttccgtcactaatttccc 206  Q
    ||||||| |||||| || |||||||||||||||| ||||| ||||||||||||| ||  ||||||| |  |||| ||  |||||| ||||||||||||||    
T  10772179 ttagtgagggaaaatatgaaatccctctctaatttcgtcattaaattttgcgactaaaaaatttgtgaagaattccatttttttctgtcactaatttccc 10772080  T
Q  207 tcactaattttgctttttctagtagtg 233  Q
    ||  ||||||| |||||||||||||||    
T  10772079 tcgttaattttactttttctagtagtg 10772053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 20088410 - 20088542
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttt------tccgtcactaatt 202  Q
    ||||||| | ||||||| |||||| ||||||||||| ||||||||||||| |||||| |||||| | |||||||| |||||      |  ||| ||||||    
T  20088410 ttagtgaggcaaaacatgaaatccttctctaattccatcactaaattttgtgaccaaagaatttatgagaaattttatttttttatatatgtcgctaatt 20088509  T
Q  203 tccctcactaattttgctttttctagtagtgtt 235  Q
    |||||| |||||||| |||||||||||||||||    
T  20088510 tccctctctaattttactttttctagtagtgtt 20088542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 6447344 - 6447244
Alignment:
Q  136 tctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcattttt-ccgtcactaatttccctcactaattttgctttttctagtagtgt 234  Q
    |||||||| ||||||||| |||| |||||| |||| ||  || ||||| |||||| || ||||||||||||||| |||||||||||||| ||||||||||    
T  6447344 tctaattctgtcactaaactttgagaccaaagaatctgcgaggaattttattttttccatcactaatttccctccctaattttgcttttcctagtagtgt 6447245  T
Q  235 t 235  Q
    |    
T  6447244 t 6447244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 15490045 - 15490169
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    |||||||  |||||| | |||||||||| |||||  |||||||||||||||||||||  ||||||| ||| |||| | ||||| ||||||||||||  ||    
T  15490045 ttagtgagagaaaacgtgaaatccctctttaattt-gtcactaaattttgcgaccaaaaaatttgtgagagattttatttttttcgtcactaatttttct 15490143  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | || |||||||||||| ||||||||    
T  15490144 ccctgattttgctttttttagtagtg 15490169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 233
Target Start/End: Complemental strand, 15501661 - 15501551
Alignment:
Q  125 taaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcattttt--ccgtcactaatttccctcactaattttgcttt 222  Q
    |||||| | |||||||||||||| ||||||||| ||| |||| ||||| | |  ||||||||||||  |||||| ||||||  ||| |||||||| ||||    
T  15501661 taaaattcatctctaattccgtccctaaattttacgatcaagaaatttatgaagaatttcatttttttccgtcattaatttttctcgctaattttacttt 15501562  T
Q  223 ttctagtagtg 233  Q
    |||||||||||    
T  15501561 ttctagtagtg 15501551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 184
Target Start/End: Complemental strand, 23233288 - 23233213
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttc 184  Q
    ||||||| ||||||| | |||| |||||| |||||| |||||||||||||||||||| | |||||| |||||||||    
T  23233288 ttagtgagggaaaacgtgaaattcctctcaaattccttcactaaattttgcgaccaaagtatttgtgagaaatttc 23233213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 203
Target Start/End: Original strand, 50240756 - 50240851
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaattt 203  Q
    ||||||| ||| ||||| ||||| ||||||||||  || ||||||||||||| ||||||||||| | ||| |||| | ||||||||||||||||||    
T  50240756 ttagtgagggataacatgaaatctctctctaattatgttactaaattttgcgtccaaggaatttatgagagattttattttttccgtcactaattt 50240851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 117 - 202
Target Start/End: Complemental strand, 27711285 - 27711199
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaa-gaaatttcatttttccgtcactaatt 202  Q
    ||||||||| ||||  |||||||||||||||||||||||||||||||||  | ||||||| | |||||  ||||||| |||||||||    
T  27711285 ggaaaacatgaaatttctctctaattccgtcactaaattttgcgaccaaaaagtttgtaagggaatttattttttccttcactaatt 27711199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 217
Target Start/End: Complemental strand, 20615468 - 20615359
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    |||| |||||||||| | |||| |||||||||||| |||| |||||||| |||||||  ||||||| ||| |||| | |||||||||| ||||||| |||    
T  20615468 ttagagaaggaaaacgtgaaattcctctctaattctgtcattaaattttacgaccaaaaaatttgtgagatattttattttttccgtctctaattttcct 20615369  T
Q  208 cactaatttt 217  Q
    |  |||||||    
T  20615368 ccttaatttt 20615359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 35579650 - 35579605
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaat 154  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||    
T  35579650 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaat 35579605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 174
Target Start/End: Complemental strand, 27212888 - 27212841
Alignment:
Q  127 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgt 174  Q
    |||||||||| ||||||||||||||||||||||||| || ||||||||    
T  27212888 aaatccctctttaattccgtcactaaattttgcgactaaagaatttgt 27212841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 235
Target Start/End: Original strand, 13615430 - 13615552
Alignment:
Q  114 gaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcattt-ttccgtcactaatttccctcacta 212  Q
    |||||||||| | |||| ||||||||||| | |||||||||||||||   ||| ||||||| ||   ||| |||| ||||||||||| ||| | |  |||    
T  13615430 gaaggaaaacgtgaaattcctctctaatttcatcactaaattttgcggttaagaaatttgtgaggggttttatttcttccgtcactatttttctttccta 13615529  T
Q  213 attttgctttttctagtagtgtt 235  Q
    ||||||||||||||| |||||||    
T  13615530 attttgctttttctaatagtgtt 13615552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 11386427 - 11386468
Alignment:
Q  190 tccgtcactaatttccctcactaattttgctttttctagtag 231  Q
    |||||||||||||||| || ||||||||||||||||||||||    
T  11386427 tccgtcactaatttccatcgctaattttgctttttctagtag 11386468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 40287546 - 40287486
Alignment:
Q  168 aatttgtaagaaatttcatttttccgtcactaatttccctcactaattttgctttttctag 228  Q
    ||||||| ||| |||||| |||||||||  ||||||||||  |||||||||||||||||||    
T  40287546 aatttgtgagagatttcaattttccgtctataatttcccttgctaattttgctttttctag 40287486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 3e-49; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 40484058 - 40484185
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatt-tttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  40484058 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttataagaaatttcattatttccgtcactaatttccct 40484157  T
Q  208 cactaattttgctttttctagtagtgtt 235  Q
    | |||||||| |||||||||||||||||    
T  40484158 cgctaatttttctttttctagtagtgtt 40484185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 618308 - 618435
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  618308 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 618407  T
Q  208 cactaattttgctttttctagtagtgtt 235  Q
    | |||||||||||||||||| |||||||    
T  618408 cgctaattttgctttttctaatagtgtt 618435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 2472839 - 2472714
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||| ||||||||||||||||||| |    
T  2472839 ttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcctt 2472740  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    ||||||||||||||||||||||||||    
T  2472739 cactaattttgctttttctagtagtg 2472714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 16631999 - 16631874
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||| |||||||||||||||||||||    
T  16631999 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 16631900  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | |||||||| |||||||||||||||    
T  16631899 cgctaatttttctttttctagtagtg 16631874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 110 - 234
Target Start/End: Complemental strand, 17039755 - 17039630
Alignment:
Q  110 tagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctc 208  Q
    |||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||| ||||    
T  17039755 tagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattttcctc 17039656  T
Q  209 actaattttgctttttctagtagtgt 234  Q
    ||||||||||||||||||||||||||    
T  17039655 actaattttgctttttctagtagtgt 17039630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 38837796 - 38837671
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||    
T  38837796 ttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 38837697  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  38837696 cgctaattttgctttttctagtagtg 38837671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 109 - 236
Target Start/End: Complemental strand, 746993 - 746865
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||    
T  746993 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 746894  T
Q  208 cactaattttgctttttctagtagtgtta 236  Q
    | ||||||||||||||||| |||||||||    
T  746893 cgctaattttgctttttcttgtagtgtta 746865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 16121964 - 16121837
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| || ||||| | ||||||||||||||||||||||    
T  16121964 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaattttattttttccgtcactaatttccct 16121865  T
Q  208 cactaattttgctttttctagtagtgtt 235  Q
    | ||||||||||||||||||||||||||    
T  16121864 cgctaattttgctttttctagtagtgtt 16121837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 10494751 - 10494877
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  10494751 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 10494850  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||  ||||||||||||||||||||    
T  10494851 cgctacatttgctttttctagtagtgt 10494877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 35620468 - 35620343
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttttccgtcactaatttccctc 208  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| || |||||  |||||||||||||||||||||||    
T  35620468 ttagtgagggaaaacatgaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttattttttccgtcactaatttccctc 35620369  T
Q  209 actaattttgctttttctagtagtgt 234  Q
     |||||||||||||||||| ||||||    
T  35620368 gctaattttgctttttctaatagtgt 35620343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 12328351 - 12328224
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||| |||||||||||||||||||||||||||||| |||| ||||||| || |||||||| |||||||| ||||||||||||    
T  12328351 ttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccgttactaatttccct 12328252  T
Q  208 cactaattttgctttttctagtagtgtt 235  Q
    ||||||||||||||||||||||||||||    
T  12328251 cactaattttgctttttctagtagtgtt 12328224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 33818686 - 33818560
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||| || ||||||||||| |||||||||    
T  33818686 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccct 33818587  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | | |||||||||||||||||||||||    
T  33818586 ccccaattttgctttttctagtagtgt 33818560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 7888811 - 7888936
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||| || ||||||| ||||||||||| ||||||||||    
T  7888811 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcaataatttccct 7888910  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  7888911 cgctaattttgctttttctagtagtg 7888936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 12045741 - 12045866
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||| |||||||||||||||||||||||| |||||||| ||||||| || ||||||| ||||||||||||||||||||||    
T  12045741 ttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttacgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccct 12045840  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  12045841 cgctaattttgctttttctagtagtg 12045866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 26708710 - 26708585
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||| |||||||||||||    
T  26708710 ttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccggcactaatttccct 26708611  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | |||||||||| |||||||||||||    
T  26708610 cgctaattttgcattttctagtagtg 26708585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 26978444 - 26978319
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||| |||||||||||||    
T  26978444 ttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccggcactaatttccct 26978345  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | |||||||||| |||||||||||||    
T  26978344 cgctaattttgcattttctagtagtg 26978319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 5982659 - 5982785
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca--tttttccgtcactaatttccc 206  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| || |||| ||  |||||||||||||||||||||    
T  5982659 ttagtgagggaaaacctaaaatccctctctaattccgtcactaaactttgcgaccaaggaatttgtgaggaattccatttttttccgtcactaatttccc 5982758  T
Q  207 tcactaattttgctttttctagtagtg 233  Q
    || || |||||||||||||||||||||    
T  5982759 tcgctgattttgctttttctagtagtg 5982785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 112 - 233
Target Start/End: Complemental strand, 8108982 - 8108860
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcac 210  Q
    |||| ||||||||| |||| ||||||||||||||||||||||||||||||||| | ||||||| || |||||||| |||||||||||||||||||||| |    
T  8108982 gtgagggaaaacatgaaattcctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctctc 8108883  T
Q  211 taattttgctttttctagtagtg 233  Q
    |||||||||||||||||||||||    
T  8108882 taattttgctttttctagtagtg 8108860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 24138966 - 24138840
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||| ||||| |||    
T  24138966 ttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaagcaatttgtgagaaatttcattttttccgtcaccaattttcct 24138867  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||||||||||||| ||||||    
T  24138866 cgctaattttgctttttctaatagtgt 24138840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 8886976 - 8886851
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||| |||||| ||||| |||    
T  8886976 ttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcgtcacaaattttcct 8886877  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  8886876 cgctaattttgctttttctagtagtg 8886851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 109 - 232
Target Start/End: Complemental strand, 17772093 - 17771969
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| | || |||||||| |||||||||||||||||||||    
T  17772093 ttagtgagggaaaacataaaatctctctctaattccgtcactaaattttgcgatcaaggaatttttgaggaatttcattttttccgtcactaatttccct 17771994  T
Q  208 cactaattttgctttttctagtagt 232  Q
    | || ||||| ||||||||||||||    
T  17771993 cgctgatttttctttttctagtagt 17771969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 23408994 - 23409120
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca--tttttccgtcactaatttccc 206  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||| || |||||||  ||||||||||||||||||  |    
T  23408994 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcatttttttccgtcactaatttttc 23409093  T
Q  207 tcactaattttgctttttctagtagtg 233  Q
    || ||||||||||||||||||||||||    
T  23409094 tcgctaattttgctttttctagtagtg 23409120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 25397913 - 25397786
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |  ||||| || ||||||||||| |||||||||    
T  25397913 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgacgaattttatgttttccgtcacaaatttccct 25397814  T
Q  208 cactaattttgctttttctagtagtgtt 235  Q
    | |||||||||||||| |||||||||||    
T  25397813 ccctaattttgcttttcctagtagtgtt 25397786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 28265597 - 28265474
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcac 210  Q
    |||| |||| || |||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||| ||||||||||||||||| |||| |    
T  28265597 gtgagggaagacgtaaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaattttcctcgc 28265498  T
Q  211 taattttgctttttctagtagtgt 234  Q
    ||||||| ||||||||||||||||    
T  28265497 taattttactttttctagtagtgt 28265474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 127 - 233
Target Start/End: Original strand, 36196426 - 36196533
Alignment:
Q  127 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaattttgctttttc 225  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||| || ||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  36196426 aaatccctctctaattccgtcactaaattttgcgaccatggattttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttc 36196525  T
Q  226 tagtagtg 233  Q
    ||||||||    
T  36196526 tagtagtg 36196533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 36832015 - 36831890
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||  |||||||||||||||||||| ||||||||||||| ||||||||||||| | || |||||||| |||| |||| |||||||||||    
T  36832015 ttagtgagggaaaatgtaaaatccctctctaattccatcactaaattttgtgaccaaggaatttatgaggaatttcatttttttcgtccctaatttccct 36831916  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    ||||||||||||||||||||||||||    
T  36831915 cactaattttgctttttctagtagtg 36831890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 17986743 - 17986869
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||| | ||||||||||||||||||||||||||||| ||||||||||| |  ||||||| ||||||||||||||||||| ||    
T  17986743 ttagtgagggaaaacatgaaattcttctctaattccgtcactaaattttgcgacgaaggaatttgtgaagaatttcattttttccgtcactaatttctct 17986842  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    |||||||||| |||||||||| |||||    
T  17986843 cactaattttactttttctagcagtgt 17986869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 23423881 - 23423755
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| || |||| |||||| |||||||||    
T  23423881 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaattttatgtttttcgtcacaaatttccct 23423782  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||||||| | ||||||||||    
T  23423781 ccctaattttgcttatcctagtagtgt 23423755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 4125313 - 4125188
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||  | ||||| |||||||||||||||||||||||||||||||| | ||||||| || |||||||| |||||||||||||||||||||    
T  4125313 ttagtgagggaaaatgtgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccct 4125214  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | |||||||| |||||||||||||||    
T  4125213 cgctaattttactttttctagtagtg 4125188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 23975652 - 23975765
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | |||||||||||||||||||||||||||||||||||||| | ||||||| || ||||||| ||||||||||||||||||||||| |    
T  23975652 gtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgc 23975751  T
Q  211 taattttgcttttt 224  Q
    ||||||||||||||    
T  23975752 taattttgcttttt 23975765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 25652708 - 25652583
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||  ||||||||||||||||||||||||| |||||||||||| ||||||||||| || |||||||| ||||| |||||| ||||||||    
T  25652708 ttagtgagggaaaatgtaaaatccctctctaattccgtcacaaaattttgcgactaaggaatttgtgaggaatttcattttttctgtcactgatttccct 25652609  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | |||||||||||||||||| |||||    
T  25652608 cgctaattttgctttttctaatagtg 25652583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 109 - 236
Target Start/End: Complemental strand, 13620252 - 13620124
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||||||||||||||| ||||| |||||||||||||||  ||||||| ||| |||| | ||||||||||||||||||||||    
T  13620252 ttagtgagggaaaacatgaaatccctctctaattctgtcacaaaattttgcgaccaacaaatttgtgagagattttattttttccgtcactaatttccct 13620153  T
Q  208 cactaattttgctttttctagtagtgtta 236  Q
    | || ||||| ||||||||||||||||||    
T  13620152 ccctgatttttctttttctagtagtgtta 13620124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 127 - 233
Target Start/End: Original strand, 15061005 - 15061112
Alignment:
Q  127 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaattttgctttttc 225  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||| || ||||||| |||||| |||||||||||||||| ||||||||||||||||    
T  15061005 aaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttcggtcactaatttccctcgctaattttgctttttc 15061104  T
Q  226 tagtagtg 233  Q
    | ||||||    
T  15061105 tggtagtg 15061112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 117 - 234
Target Start/End: Complemental strand, 17036529 - 17036411
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcattt-ttccgtcactaatttccctcactaatt 215  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||||||||||||| || ||||| |||| ||||||||||||| || ||| ||||||    
T  17036529 ggaaaacgcaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgaggaattttatttcttccgtcactaatctcgctccctaatt 17036430  T
Q  216 ttgctttttctagtagtgt 234  Q
    |||| ||||||||||||||    
T  17036429 ttgcattttctagtagtgt 17036411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 133 - 234
Target Start/End: Complemental strand, 7003831 - 7003729
Alignment:
Q  133 ctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaattt-catttttccgtcactaatttccctcactaattttgctttttctagtag 231  Q
    ||||||||||||||||||||||||||||| || ||||||||| || ||||| | ||||||||||||||||||||||| ||||||||| ||||||||||||    
T  7003831 ctctctaattccgtcactaaattttgcgatcatggaatttgtgaggaattttcttttttccgtcactaatttccctcgctaattttgttttttctagtag 7003732  T
Q  232 tgt 234  Q
    |||    
T  7003731 tgt 7003729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 25673353 - 25673227
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttttccgtcactaatttccctc 208  Q
    |||||||  |||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||| ||  |||  |||||||||||||||||| ||||    
T  25673353 ttagtgacagaaaacatgaaatccctctctaattccgtcactgaattttgcgaccaaagaatttgtaggagttttattttttccgtcactaattttcctc 25673254  T
Q  209 actaattttgctttttctagtagtgtt 235  Q
     ||||||||  |||| |||||||||||    
T  25673253 cctaatttttattttcctagtagtgtt 25673227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 36597465 - 36597340
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| |||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||| || ||||| || ||||||||||  |||||  ||    
T  36597465 ttagtgagggaaaacataaaattcctctctaattctgtcactaaattttacgaccaaggaatttgtgaggaattttatgttttccgtcataaatttttct 36597366  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | | ||||||||||||||||||||||    
T  36597365 cccaaattttgctttttctagtagtg 36597340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 117 - 233
Target Start/End: Complemental strand, 27428129 - 27428012
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatt 215  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||| |||||| | || ||||| | ||||| ||||||||||||||||| ||||||    
T  27428129 ggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttattagcaattttatttttttcgtcactaatttccctccctaatt 27428030  T
Q  216 ttgctttttctagtagtg 233  Q
    || |||||  ||||||||    
T  27428029 tttcttttattagtagtg 27428012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 112 - 233
Target Start/End: Complemental strand, 13974200 - 13974078
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttttc-cgtcactaatttccctcac 210  Q
    |||| ||||||| | |||||||||||| |||||||||||||||||  |||||| | ||||||| |  ||||||||||||  |||| |||||||||||| |    
T  13974200 gtgagggaaaacgtgaaatccctctctgattccgtcactaaatttcacgaccatgaaatttgtgaagaatttcatttttttcgtcgctaatttccctcgc 13974101  T
Q  211 taattttgctttttctagtagtg 233  Q
    |||||||||||||||||||||||    
T  13974100 taattttgctttttctagtagtg 13974078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 117 - 234
Target Start/End: Original strand, 20959530 - 20959648
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatt 215  Q
    ||||||| | ||||| ||||||||||||||||||||||||| |||| ||||||||||| || ||||| | ||||||||||| | |||| |||| ||||||    
T  20959530 ggaaaacgtgaaatctctctctaattccgtcactaaattttacgactaaggaatttgtgaggaattttattttttccgtcagtgattttcctccctaatt 20959629  T
Q  216 ttgctttttctagtagtgt 234  Q
    || ||||||||||||||||    
T  20959630 ttactttttctagtagtgt 20959648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 112 - 233
Target Start/End: Complemental strand, 36716322 - 36716200
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcattttt-ccgtcactaatttccctcac 210  Q
    |||| ||||||| | |||||| ||||||||||| ||| |||||||| ||||||  |||||||| || |||||||||||| || ||||||||||||||| |    
T  36716322 gtgagggaaaacgtgaaatccttctctaattccttcattaaattttacgaccatagaatttgtgaggaatttcattttttccatcactaatttccctcgc 36716223  T
Q  211 taattttgctttttctagtagtg 233  Q
    |||||||| ||||||||||||||    
T  36716222 taattttgttttttctagtagtg 36716200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 20188066 - 20187941
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    |||||||  |||||| || |||| ||||||||||| |||| |||||||||||| |||||||||||| || ||||| | |||||||||||||||||||| |    
T  20188066 ttagtgagagaaaacgtagaatcactctctaattctgtcattaaattttgcgatcaaggaatttgtgaggaattttattttttccgtcactaatttcctt 20187967  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | |||||||||||||| ||| |||||    
T  20187966 cgctaattttgcttttgctaatagtg 20187941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 17079427 - 17079514
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaattt 203  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||  |||| | |||||||||| |||||||    
T  17079427 ggaaaacatcaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtaagggattttattttttccgtccctaattt 17079514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 23974701 - 23974574
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||| |||  ||||||||||||||| ||||| |||||||| |||| ||||||||||| ||| |||| | |||||||||||||||||| |||    
T  23974701 ttagtgagggaaagcattcaatccctctctaatttcgtcattaaattttacgacaaaggaatttgtgagagattttattttttccgtcactaattttcct 23974602  T
Q  208 cactaattttgctttttctagtagtgtt 235  Q
      |||||||| ||||| |||||||||||    
T  23974601 tcctaatttttcttttcctagtagtgtt 23974574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 117 - 234
Target Start/End: Complemental strand, 10420369 - 10420251
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatt 215  Q
    ||||||||| ||||||||||||||||  |||||||||||||||||||||  || |||| ||  |||| | ||||||||||||||||||||||| ||||||    
T  10420369 ggaaaacatgaaatccctctctaattttgtcactaaattttgcgaccaacaaaattgtgagggattttattttttccgtcactaatttccctctctaatt 10420270  T
Q  216 ttgctttttctagtagtgt 234  Q
    ||| ||| | |||||||||    
T  10420269 ttgatttctttagtagtgt 10420251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 119 - 232
Target Start/End: Complemental strand, 33735088 - 33734974
Alignment:
Q  119 aaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatttt 217  Q
    ||||||| ||| |||||| ||||||||||||||||||||||||||||||||||| | ||  |||| | ||||||| ||| |||||| |||| ||||||||    
T  33735088 aaaacatgaaacccctctttaattccgtcactaaattttgcgaccaaggaatttatgagggattttattttttccctcattaattttcctccctaatttt 33734989  T
Q  218 gctttttctagtagt 232  Q
    |||||| ||||||||    
T  33734988 gcttttcctagtagt 33734974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 35778155 - 35778277
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||| ||| |||| || | |||||||||||||||| |||||||| ||| |||| | ||||||| ||||||||||||||    
T  35778155 ttagtgagggaaaacatgaaatccctatctcattctgtgattaaattttgcgaccaatgaatttgtgagagattttattttttccatcactaatttccct 35778254  T
Q  208 cactaattttgctttttctagta 230  Q
    | | |||||| ||||||||||||    
T  35778255 cccaaattttactttttctagta 35778277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 117 - 233
Target Start/End: Complemental strand, 11927903 - 11927786
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatt 215  Q
    ||||||| | |||||||||||||||||||||||||||||||||||| ||| ||||||| ||  |||| | ||||||| || |||||||  ||| ||||||    
T  11927903 ggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacgaagtaatttgtgagggattttattttttccatctctaatttatctccctaatt 11927804  T
Q  216 ttgctttttctagtagtg 233  Q
    |||||||||||| |||||    
T  11927803 ttgctttttctaatagtg 11927786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 109 - 205
Target Start/End: Complemental strand, 33816883 - 33816786
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttcc 205  Q
    ||||||| ||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||| || ||||| || ||||| ||||| |||||||    
T  33816883 ttagtgagggaaaacatgaaattcctttctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcacaaatttcc 33816786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 133 - 223
Target Start/End: Complemental strand, 32726827 - 32726736
Alignment:
Q  133 ctctctaattccgtcactaaattttgcgaccaaggaatttgt-aagaaatttcatttttccgtcactaatttccctcactaattttgctttt 223  Q
    |||||||||||||||||||||||||||||||||||||||||| |||   |||   |||||| ||||||||||| ||| ||||||||||||||    
T  32726827 ctctctaattccgtcactaaattttgcgaccaaggaatttgtcaagggttttatattttccatcactaatttcgctccctaattttgctttt 32726736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 109 - 223
Target Start/End: Complemental strand, 3080821 - 3080706
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||||||||| |||| | ||||||| ||||| ||| || |||||||| ||| |||| | ||||||| |||| |||||||||    
T  3080821 ttagtgagggaaaacatgaaatccctctcaaatttcatcactaagttttgtgactaaagaatttgtgagagattttattttttccatcacgaatttccct 3080722  T
Q  208 cactaattttgctttt 223  Q
      ||||||||||||||    
T  3080721 acctaattttgctttt 3080706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 31853203 - 31853158
Alignment:
Q  119 aaaacataaaatccctctctaattccgtcactaaattttgcgacca 164  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||    
T  31853203 aaaacatgaaatctctctctaattccgtcactaaattttgcgacca 31853158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 16472287 - 16472176
Alignment:
Q  128 aatccctctctaattccgtcactaaa-ttttgcgaccaaggaatttgt-aagaaatttcatttttccgtcactaatttccctcactaattttgctttttc 225  Q
    |||| ||||||||||| ||||||||| |||||||||||| |||||| | ||| | |||  ||||| || ||||||||||| || | ||||||||||||||    
T  16472287 aatcgctctctaattctgtcactaaacttttgcgaccaacgaatttttgaaggattttatttttttcgacactaatttcc-tcccaaattttgctttttc 16472189  T
Q  226 tagtagtgttatt 238  Q
    ||||||| |||||    
T  16472188 tagtagtattatt 16472176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 29727939 - 29727895
Alignment:
Q  189 ttccgtcactaatttccctcactaattttgctttttctagtagtg 233  Q
    |||||||||||||||||||| |||||||| |||||||||||||||    
T  29727939 ttccgtcactaatttccctcgctaattttactttttctagtagtg 29727895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 16464723 - 16464768
Alignment:
Q  188 tttccgtcactaatttccctcactaattttgctttttctagtagtg 233  Q
    ||||||||||||||||||||| |||||||||| ||| |||||||||    
T  16464723 tttccgtcactaatttccctccctaattttgcctttcctagtagtg 16464768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 234
Target Start/End: Complemental strand, 19891025 - 19890985
Alignment:
Q  194 tcactaatttccctcactaattttgctttttctagtagtgt 234  Q
    ||||||||||||||| |||||||||||||||||| ||||||    
T  19891025 tcactaatttccctcgctaattttgctttttctaatagtgt 19890985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 109 - 172
Target Start/End: Original strand, 9024227 - 9024291
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaa-ttccgtcactaaattttgcgaccaaggaattt 172  Q
    ||||||| ||| ||||| ||||| |||||||| ||  || |||||||||||||||||||||||||    
T  9024227 ttagtgagggataacatgaaatctctctctaaattatgttactaaattttgcgaccaaggaattt 9024291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 9354 - 9228
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||    
T  9354 ttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 9255  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    |||||||||||||||||||||||||||    
T  9254 cactaattttgctttttctagtagtgt 9228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 99; Significance: 1e-48; HSPs: 77)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 15364583 - 15364457
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||    
T  15364583 ttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 15364484  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    |||||||||||||||||||||||||||    
T  15364483 cactaattttgctttttctagtagtgt 15364457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 28364925 - 28365051
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||| ||||||||||||||||||||||    
T  28364925 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 28365024  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||||||||||||||||||||    
T  28365025 cgctaattttgctttttctagtagtgt 28365051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 9892977 - 9893102
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  9892977 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 9893076  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  9893077 cgctaattttgctttttctagtagtg 9893102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 21990299 - 21990174
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttttccgtcactaatttccctc 208  Q
    ||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||| || |||||||||||||||||| |||||||||||    
T  21990299 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaatttttgcgaccaagaaatttgtgaggaatttcatttttccgtcattaatttccctc 21990200  T
Q  209 actaattttgctttttctagtagtgt 234  Q
     |||||||||||||||||||||||||    
T  21990199 gctaattttgctttttctagtagtgt 21990174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 24661134 - 24661008
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||    
T  24661134 ttagtgagggaaaacatgaaatctctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 24661035  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||||||||||||||||||||    
T  24661034 cgctaattttgctttttctagtagtgt 24661008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 25398016 - 25398138
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  25398016 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 25398115  T
Q  208 cactaattttgctttttctagta 230  Q
    | |||||||| ||||||||||||    
T  25398116 cgctaatttttctttttctagta 25398138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 495752 - 495627
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||    
T  495752 ttagtgagggaaaacgtaaaatcactctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 495653  T
Q  208 cactaattttgctttttctagtagtg 233  Q
      ||||||||||||||||||||||||    
T  495652 tgctaattttgctttttctagtagtg 495627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 6598478 - 6598603
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| ||||||||||||||||||||||    
T  6598478 ttagtgagggaaaacttgaaatccctctctaattccgtcactaaattttgcgaccaagtaatttgtgaggaatttcattttttccgtcactaatttccct 6598577  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  6598578 cgctaattttgctttttctagtagtg 6598603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 26224442 - 26224567
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||| || ||||||| ||||||||||||||||||||||    
T  26224442 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccct 26224541  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  26224542 cgctaattttgctttttctagtagtg 26224567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 11049876 - 11049750
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||    
T  11049876 ttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 11049777  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
      ||||||||| |||||||||||||||    
T  11049776 tgctaattttgttttttctagtagtgt 11049750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 12200708 - 12200833
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| |||||| || |||||||||||||||||| |||||||||||| |||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  12200708 ttagtgagggaaaatatgaaatccctctctaattccctcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 12200807  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    ||||||||||||||||||||| ||||    
T  12200808 cactaattttgctttttctagcagtg 12200833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 12951722 - 12951847
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| || ||||||||||| |||||||||    
T  12951722 ttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgagaaattttatgttttccgtcacaaatttccct 12951821  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | |||||||||||||| |||||||||    
T  12951822 ctctaattttgcttttcctagtagtg 12951847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 15448399 - 15448524
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||||||| ||||||||||||  ||||||||||| || ||||||| ||||||||||||||||||||||    
T  15448399 ttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgattaaggaatttgtgaggaatttcattttttccgtcactaatttccct 15448498  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  15448499 cgctaattttgctttttctagtagtg 15448524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 117 - 233
Target Start/End: Complemental strand, 18033642 - 18033526
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttttccgtcactaatttccctcactaattt 216  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||| || |||||||||| |||||||||| |||||||    
T  18033642 ggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttaatgtttccgtcacaaatttccctccctaattt 18033543  T
Q  217 tgctttttctagtagtg 233  Q
    ||||||| |||||||||    
T  18033542 tgcttttcctagtagtg 18033526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 15961532 - 15961406
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||| ||||||||||||||| |||||||||||||| |||| |||||||||| |||||||| |||||||||||||||||||||    
T  15961532 ttagtgagggaaaacgtaaaattcctctctaattccgttactaaattttgcgatcaagaaatttgtaaggaatttcattttttccgtcactaatttccct 15961433  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    |  ||||||||||||||||||||||||    
T  15961432 cgttaattttgctttttctagtagtgt 15961406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 22083852 - 22083978
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||| || ||||||||||| |||||||||    
T  22083852 ttagtgagggaaaacatgaaatccctctctaattccgtcacaaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccct 22083951  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||||||||| ||||||||||    
T  22083952 ccctaattttgcttttcctagtagtgt 22083978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 2992629 - 2992754
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||| | ||||||| ||||||||||||||    
T  2992629 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttattttttccatcactaatttccct 2992728  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | |||||| ||||||| |||||||||    
T  2992729 cgctaattatgcttttcctagtagtg 2992754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 6605621 - 6605496
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||| ||||||||||||||||||| |||||||||| ||| ||||||| || |||||||| |||||||||||||||||||||    
T  6605621 ttagtgagggaaaacatgaaatctctctctaattccgtcactatattttgcgactaagaaatttgtgaggaatttcattttttccgtcactaatttccct 6605522  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  6605521 cgctaattttgctttttctagtagtg 6605496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 112 - 236
Target Start/End: Complemental strand, 22579471 - 22579346
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||| || |||||||| |||||||||||||||||||||| |    
T  22579471 gtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatagaatttgtgaggaatttcattttttccgtcactaatttccctcgc 22579372  T
Q  211 taattttgctttttctagtagtgtta 236  Q
    ||||||||||||||||| ||||||||    
T  22579371 taattttgctttttctaatagtgtta 22579346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 26939601 - 26939726
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| |||||  |||||||||||||||    
T  26939601 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttttgtcactaatttccct 26939700  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    || ||||||| |||||||||||||||    
T  26939701 cagtaattttactttttctagtagtg 26939726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 109 - 232
Target Start/End: Complemental strand, 27796959 - 27796835
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||| | |||||||||| | |||||| ||| ||||| ||||||||||||||||    
T  27796959 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaatcaaggaatttatgagaaatatcatttttttcgtcactaatttccct 27796860  T
Q  208 cactaattttgctttttctagtagt 232  Q
    | |||||||||||||||||||||||    
T  27796859 cgctaattttgctttttctagtagt 27796835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 118 - 236
Target Start/End: Complemental strand, 1939358 - 1939239
Alignment:
Q  118 gaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcactaattt 216  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||  ||||||| || |||||||| ||||| |||||||||||||||| |||||||    
T  1939358 gaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaaaaatttgtgaggaatttcattttttcggtcactaatttccctcgctaattt 1939259  T
Q  217 tgctttttctagtagtgtta 236  Q
    ||||||||||||||||||||    
T  1939258 tgctttttctagtagtgtta 1939239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 119 - 233
Target Start/End: Original strand, 2669333 - 2669448
Alignment:
Q  119 aaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatttt 217  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||| |||||||||||||||||  |||||||    
T  2669333 aaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcgtcactaatttccctcgttaatttt 2669432  T
Q  218 gctttttctagtagtg 233  Q
    ||||||||||||||||    
T  2669433 gctttttctagtagtg 2669448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 11077663 - 11077785
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| || ||||| || ||||||||||| |||||||||    
T  11077663 ttagtgagggaaaacatgaaatccctctctaataccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccct 11077762  T
Q  208 cactaattttgctttttctagta 230  Q
    | |||||||| ||||||||||||    
T  11077763 ccctaatttttctttttctagta 11077785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 33250833 - 33250707
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||    
T  33250833 ttagtgagggaaaacatgaaattcctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 33250734  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    |  ||||||||  ||||||||||||||    
T  33250733 cgttaattttgtcttttctagtagtgt 33250707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 118 - 234
Target Start/End: Original strand, 6978300 - 6978417
Alignment:
Q  118 gaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaattt 216  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||| ||||||||||||| |||||||    
T  6978300 gaaaacatgaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtaactaatttccctcgctaattt 6978399  T
Q  217 tgctttttctagtagtgt 234  Q
    ||||||| ||| ||||||    
T  6978400 tgcttttcctaatagtgt 6978417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 117 - 232
Target Start/End: Original strand, 5360431 - 5360547
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatt 215  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||  ||||||| || ||||| | ||||||||||||||||||||||| ||||||    
T  5360431 ggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaaaaatttgtgaggaattttattttttccgtcactaatttccctcgctaatt 5360530  T
Q  216 ttgctttttctagtagt 232  Q
    |||||||||||||||||    
T  5360531 ttgctttttctagtagt 5360547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 109 - 227
Target Start/End: Complemental strand, 5192314 - 5192195
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||| || |||||||| |||||| |||||||||| |||    
T  5192314 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttccttcactaattttcct 5192215  T
Q  208 cactaattttgctttttcta 227  Q
    | ||||||||||||||||||    
T  5192214 cgctaattttgctttttcta 5192195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 117 - 234
Target Start/End: Original strand, 18492391 - 18492509
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatt 215  Q
    ||||||| | ||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||| | || ||||||    
T  18492391 ggaaaacgtgaaatcccactctaattccgtcactaaattttgcgaccatggaatttgtgagaaatttcattttttccgtcactaatttgcatcgctaatt 18492490  T
Q  216 ttgctttttctagtagtgt 234  Q
    ||||||||||||| |||||    
T  18492491 ttgctttttctagcagtgt 18492509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 112 - 233
Target Start/End: Original strand, 20182162 - 20182284
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | ||||||||||||||||||||||||||||||||||| || | ||||||| || ||||||| ||||||||||||||||||||||| |    
T  20182162 gtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgc 20182261  T
Q  211 taattttgctttttctagtagtg 233  Q
    ||||||| |||||||||||||||    
T  20182262 taattttactttttctagtagtg 20182284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 112 - 233
Target Start/End: Complemental strand, 22153829 - 22153707
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | ||||||||||||||||||||||||||||||||||| || | ||||||| || |||||||| |||||||||||||||||||||| |    
T  22153829 gtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgc 22153730  T
Q  211 taattttgctttttctagtagtg 233  Q
    ||||||| |||||||||||||||    
T  22153729 taattttactttttctagtagtg 22153707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 30834085 - 30833960
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcattttt-ccgtcactaatttccct 207  Q
    ||||||| ||| ||| ||||||||||||||||||| |||| ||||||||||||||||  |||| || || |||||||||||| |||||||||||||||||    
T  30834085 ttagtgagggagaacgtaaaatccctctctaattctgtcattaaattttgcgaccaaaaaattagtgaggaatttcattttttccgtcactaatttccct 30833986  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  30833985 cgctaattttgctttttctagtagtg 30833960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 112 - 230
Target Start/End: Original strand, 21140956 - 21141075
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | |||||||||||||||||||||||||||||||||||||| | ||||||  || ||||||| |||||||||||||||||||||||      
T  21140956 gtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgggaggaatttcattttttccgtcactaatttccctcgt 21141055  T
Q  211 taattttgctttttctagta 230  Q
    ||||||||||||||||||||    
T  21141056 taattttgctttttctagta 21141075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 12160971 - 12160846
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||| ||| |||  ||||||| || ||||||| ||||| ||||||||||||||||    
T  12160971 ttagtgagggaaaacataaaatccctctctaatttcgtcactaaatttt-cgatcaaaaaatttgtgaggaatttcattttttacgtcactaatttccct 12160873  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||| ||||||||||||||||    
T  12160872 cgctaattttactttttctagtagtgt 12160846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 12499230 - 12499356
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||  ||||||| || ||||||| |||||||||||||| |||||||    
T  12499230 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactttccct 12499329  T
Q  208 cactaattttg-ctttttctagtagtg 233  Q
    | |||||||||  ||||||||||||||    
T  12499330 cgctaattttgtttttttctagtagtg 12499356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 12506559 - 12506685
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||  ||||||| || ||||||| |||||||||||||| |||||||    
T  12506559 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactttccct 12506658  T
Q  208 cactaattttg-ctttttctagtagtg 233  Q
    | |||||||||  ||||||||||||||    
T  12506659 cgctaattttgtttttttctagtagtg 12506685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 12509671 - 12509545
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||  ||||||| || |||||||| ||||||||||||| |||||||    
T  12509671 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactttccct 12509572  T
Q  208 cactaattttg-ctttttctagtagtg 233  Q
    | |||||||||  ||||||||||||||    
T  12509571 cgctaattttgtttttttctagtagtg 12509545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 14872133 - 14872255
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||| || ||||| || ||||||||||| |||||||||    
T  14872133 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttggaaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccct 14872232  T
Q  208 cactaattttgctttttctagta 230  Q
    | |||||||| ||||| ||||||    
T  14872233 ctctaatttttcttttcctagta 14872255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 127 - 233
Target Start/End: Original strand, 15509188 - 15509295
Alignment:
Q  127 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaattttgctttttc 225  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||||| || ||||||| ||||||||||||||||||||||| |||||||| |||||||    
T  15509188 aaatccctctctaattccgtcactaaattttccgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatttttctttttc 15509287  T
Q  226 tagtagtg 233  Q
    | ||||||    
T  15509288 tggtagtg 15509295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 112 - 233
Target Start/End: Complemental strand, 16250924 - 16250802
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcattttt-ccgtcactaatttccctcac 210  Q
    |||| ||||||| | ||||| ||||||||||| ||||||||||||||||| || | ||||||| || |||||||||||| ||||||||||||||||||      
T  16250924 gtgagggaaaacgtgaaatctctctctaattctgtcactaaattttgcgatcatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgt 16250825  T
Q  211 taattttgctttttctagtagtg 233  Q
    |||||||||||||||||||||||    
T  16250824 taattttgctttttctagtagtg 16250802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 125 - 234
Target Start/End: Original strand, 28668130 - 28668240
Alignment:
Q  125 taaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaattttgctttt 223  Q
    |||||||||| ||||||||||||| |||||||||||| |||||||||||| || ||||| | ||||||||||||| ||||||||| |||||||| |||||    
T  28668130 taaaatccctttctaattccgtcattaaattttgcgatcaaggaatttgtgaggaattttattttttccgtcactgatttccctcgctaattttactttt 28668229  T
Q  224 tctagtagtgt 234  Q
    |||||||||||    
T  28668230 tctagtagtgt 28668240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 9885257 - 9885382
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttt-tccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||| |||||  ||||||||||||||| |||||  ||||||| ||| |||| ||||| ||||||||||||||||||    
T  9885257 ttagtgagggaaaacatgaaatccctctttaattttgtcactaaattttgcaaccaacaaatttgtgagagattttattttttccgtcactaatttccct 9885356  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | || |||||||||||||||||||||    
T  9885357 ccctgattttgctttttctagtagtg 9885382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 14886575 - 14886700
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||| |||| ||| ||  |||| | |||||| ||||||||||| |||    
T  14886575 ttagtgagggaaaacatcaaatccctctctaattccgtcactaaattttacgaccaaagaatatgtgagggattttattttttctgtcactaattttcct 14886674  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||| ||||||    
T  14886675 ccctaattttgctttttctggtagtg 14886700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 125 - 233
Target Start/End: Original strand, 17919566 - 17919675
Alignment:
Q  125 taaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaattttgctttt 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |  ||||||| ||||||||||| | ||||| ||| ||||||||| ||||    
T  17919566 taaaatccctctctaattccgtcactaaattttgcgaccaaggaatttatgatgaatttcattttttccgtcattgatttctctcgctaattttgttttt 17919665  T
Q  224 tctagtagtg 233  Q
    ||||||||||    
T  17919666 tctagtagtg 17919675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 18048802 - 18048927
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| | ||||||| ||||||||| |||||||  |||||||||||||||||||| |||||||| |||||||| | |||||||||||||||||| |||    
T  18048802 ttagtgaggaaaaacatgaaatccctccctaattctctcactaaattttgcgaccaacgaatttgtgagaaattttattttttccgtcactaattttcct 18048901  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||| |||| |||||||||    
T  18048902 ctctaattttgtttttcctagtagtg 18048927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 133 - 232
Target Start/End: Original strand, 10458802 - 10458902
Alignment:
Q  133 ctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttt-tccgtcactaatttccctcactaattttgctttttctagtag 231  Q
    |||| ||||||| |||||||||||||| |||||||||||||| || || |||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  10458802 ctctttaattccatcactaaattttgcaaccaaggaatttgtgaggaaattcattttttccgtcactaatttccctcactaattttactttttctagtag 10458901  T
Q  232 t 232  Q
    |    
T  10458902 t 10458902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 11530239 - 11530365
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||| |||||||||||||||||||||||| |||  ||| ||||| | |||||||| || ||||||||||| |||||||||    
T  11530239 ttagtgagggaaaacatgaaatccatctctaattccgtcactaaattttacgattaagaaatttatgagaaattttatgttttccgtcacaaatttccct 11530338  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||||||||| ||| ||||||    
T  11530339 ccctaattttgcttttcctaatagtgt 11530365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 117 - 215
Target Start/End: Original strand, 12845025 - 12845124
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatt 215  Q
    ||||||| | ||||| ||||||||||||||||||||||||||||||||| |||||||| || ||||| | ||||||||||||||||||||||| ||||||    
T  12845025 ggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgagcaattttattttttccgtcactaatttccctccctaatt 12845124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 127 - 233
Target Start/End: Original strand, 14772693 - 14772800
Alignment:
Q  127 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcactaattttgctttttc 225  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||| || ||||| || |||| |||||| |||||| ||| ||||||||||||||||    
T  14772693 aaatctctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaattttatgtttttcgtcacaaatttctctccctaattttgctttttc 14772792  T
Q  226 tagtagtg 233  Q
    || |||||    
T  14772793 taatagtg 14772800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 11350196 - 11350315
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttttccgtcactaatttccctc 208  Q
    ||||||| ||||||||||||||| ||||||||||| |||||||||||||||||  |||||||||||  ||  |||   ||||||||||| ||||||||||    
T  11350196 ttagtgagggaaaacataaaatcgctctctaattctgtcactaaattttgcgattaaggaatttgt--gatttttttgttttccgtcacaaatttccctc 11350293  T
Q  209 actaattttgctttttctagta 230  Q
     |||||||||||||| ||||||    
T  11350294 cctaattttgcttttcctagta 11350315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 133 - 233
Target Start/End: Complemental strand, 12351687 - 12351586
Alignment:
Q  133 ctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaattttgctttttctagtag 231  Q
    |||||||||||||||| ||||||||||||| ||||||||||| || ||||| | |||||||||||||||||||||||  ||||| | |||||||||||||    
T  12351687 ctctctaattccgtcattaaattttgcgactaaggaatttgtgaggaattttattttttccgtcactaatttccctccttaattatactttttctagtag 12351588  T
Q  232 tg 233  Q
    ||    
T  12351587 tg 12351586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 127 - 233
Target Start/End: Complemental strand, 21691603 - 21691495
Alignment:
Q  127 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaa-tttccctcactaattttgcttttt 224  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||| |||||||| | ||||| | ||||||| |||||||| |||||||| ||||||    
T  21691603 aaatccctctctaatttcgtcactaaattttgcgaccaaagaatttgtgagaaattttatttttttcatcactaattttccctctctaattttacttttt 21691504  T
Q  225 ctagtagtg 233  Q
     ||||||||    
T  21691503 ttagtagtg 21691495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 112 - 203
Target Start/End: Original strand, 27705439 - 27705531
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaattt 203  Q
    |||| ||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||| ||||||||| ||||||||    
T  27705439 gtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtaactaattt 27705531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 109 - 227
Target Start/End: Complemental strand, 20692936 - 20692817
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgt-aagaaatttcatttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||  || || | ||||| |||  |||||||||||||||||| |||    
T  20692936 ttagtgagggaaaacgtaaaatccctctctaatttcgtcactaaattttgcgaccaaaaaacttataaagaattttattttttccgtcactaattttcct 20692837  T
Q  208 cactaattttgctttttcta 227  Q
    |  |||||||| ||||||||    
T  20692836 cgttaattttgttttttcta 20692817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 109 - 190
Target Start/End: Original strand, 13145016 - 13145097
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcattttt 190  Q
    ||||||| ||||||| | ||||| |||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  13145016 ttagtgagggaaaacgtgaaatctctctttaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttt 13145097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 134 - 229
Target Start/End: Complemental strand, 12157476 - 12157380
Alignment:
Q  134 tctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcattttt-ccgtcactaatttccctcactaattttgctttttctagt 229  Q
    ||||||||||||||||||||||||  |||||| || ||||||||  |||| |||||| ||||||||||||||||||  |||||||||||||||||||    
T  12157476 tctctaattccgtcactaaattttatgaccaaagattttgtaagggattttattttttccgtcactaatttccctccttaattttgctttttctagt 12157380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 109 - 188
Target Start/End: Complemental strand, 19175902 - 19175823
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcattt 188  Q
    ||||||| ||||||  |||||| ||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||    
T  19175902 ttagtgagggaaaatgtaaaattcctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattt 19175823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 6065451 - 6065577
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||  |||| |||||||||||  |||| |||||||||||| ||| |||||||| ||| |||| | ||||||||||| |||||| |||    
T  6065451 ttagtgagggaaaacaagaaattcctctctaattttgtcattaaattttgcgatcaaagaatttgtgagagattttattttttccgtcattaattttcct 6065550  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||||||||| ||| ||||||    
T  6065551 ccctaattttgcttttcctaatagtgt 6065577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 121 - 234
Target Start/End: Original strand, 16118172 - 16118286
Alignment:
Q  121 aacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaattttgc 219  Q
    ||||| ||||| |||||||||| ||||| |||||||||||| | |||||||||||||| |||| | |||||||||||||||||||| || |||||||| |    
T  16118172 aacatgaaatctctctctaatttcgtcattaaattttgcgatcgaggaatttgtaagagattttagtttttccgtcactaatttccgtccctaattttac 16118271  T
Q  220 tttttctagtagtgt 234  Q
     ||| ||| ||||||    
T  16118272 ctttcctaatagtgt 16118286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 112 - 217
Target Start/End: Original strand, 23281803 - 23281908
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | ||||||||||||||||||||||||||||||||||||||   ||||||| || ||||| | ||||||| ||||||||||||||| |    
T  23281803 gtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccataaaatttgtgaggaattttattttttccatcactaatttccctc-c 23281901  T
Q  211 taatttt 217  Q
    |||||||    
T  23281902 taatttt 23281908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 109 - 229
Target Start/End: Original strand, 1954895 - 1955015
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttt-tccgtcactaatttccct 207  Q
    ||||||||||||||||| |||||| ||| ||||||| |||| |||||||| ||||||| ||||||| |  ||||| ||||| ||||||||| ||||||||    
T  1954895 ttagtgaaggaaaacatgaaatcc-tctataattccatcacaaaattttgtgaccaagaaatttgtgacgaattttattttttccgtcactcatttccct 1954993  T
Q  208 cactaattttgctttttctagt 229  Q
      |||||||||||||| |||||    
T  1954994 tcctaattttgcttttcctagt 1955015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 151 - 234
Target Start/End: Original strand, 5250195 - 5250279
Alignment:
Q  151 aaattttgcgaccaaggaatttgtaagaaatttcatttt-tccgtcactaatttccctcactaattttgctttttctagtagtgt 234  Q
    |||||||||||||||| ||||| | || ||||||||||| ||||||||||||||||||| || ||||| ||||||||||||||||    
T  5250195 aaattttgcgaccaagaaatttatgaggaatttcattttttccgtcactaatttccctcgctgatttttctttttctagtagtgt 5250279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 9060115 - 9060231
Alignment:
Q  120 aaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaattttg 218  Q
    |||||| ||||  ||||||||||| |||||||||||||||||||||  ||||||| ||  |||| | ||||||||||||||||||| |||  ||||||||    
T  9060115 aaacatgaaatttctctctaattctgtcactaaattttgcgaccaaaaaatttgtgagggattttattttttccgtcactaatttcgctctttaattttg 9060214  T
Q  219 ctttttctagtagtgtt 235  Q
    ||||||||  |||||||    
T  9060215 ctttttcttatagtgtt 9060231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 343680 - 343593
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaattt 203  Q
    ||||||| ||||||||||||||||||| ||||||||| |||||||||||  ||||||| || |||||||| |||| ||||||||||||    
T  343680 ggaaaacgtaaaatccctctctaattctgtcactaaaatttgcgaccaaaaaatttgtgaggaatttcattttttacgtcactaattt 343593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 117 - 227
Target Start/End: Complemental strand, 12205302 - 12205191
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcactaatt 215  Q
    ||||||| | ||||||||| ||||||||||||||||||||| |||   | |||||||| |||||||| || |||||||||||||||||| ||  ||||||    
T  12205302 ggaaaacgtgaaatccctcactaattccgtcactaaattttacgatttaagaatttgtgagaaatttaatgttttccgtcactaatttctcttcctaatt 12205203  T
Q  216 ttgctttttcta 227  Q
    || |||||||||    
T  12205202 ttactttttcta 12205191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 109 - 223
Target Start/End: Complemental strand, 22055737 - 22055622
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| | ||||||| |||||||||||||||||| ||| | ||||||| |||||| |||||||| || ||||| | |||||| |||| ||||||||||    
T  22055737 ttagtgaggaaaaacatgaaatccctctctaattccctcattgaattttgtgaccaacgaatttgtgaggaattttattttttctgtcattaatttccct 22055638  T
Q  208 cactaattttgctttt 223  Q
    | ||||||||| ||||    
T  22055637 ctctaattttgttttt 22055622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 112 - 233
Target Start/End: Original strand, 14036637 - 14036751
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttttccgtcactaatttccctcact 211  Q
    |||| ||||||| | ||||||||||||||||| |||| |||||||||||| || ||||||||| || ||       |||| |||||||||||||||| ||    
T  14036637 gtgagggaaaacgtgaaatccctctctaattctgtcattaaattttgcgatcatggaatttgtgaggaa-------tttctgtcactaatttccctcgct 14036729  T
Q  212 aattttgctttttctagtagtg 233  Q
    |||||| |||||| ||||||||    
T  14036730 aattttcctttttttagtagtg 14036751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 109 - 203
Target Start/End: Original strand, 33547560 - 33547655
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaattt 203  Q
    ||||||| ||||||||| |||||||| |||||||  ||||||||||||||||||||| |||||||| ||  |||| | |||||||||| |||||||    
T  33547560 ttagtgagggaaaacatgaaatccctatctaattttgtcactaaattttgcgaccaaagaatttgtgagggattttattttttccgtccctaattt 33547655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 117 - 235
Target Start/End: Complemental strand, 10929614 - 10929494
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgt-aagaaatttca-tttttccgtcactaatttccctcactaat 214  Q
    ||||||||| ||||| |||| | ||||||||| ||||||||||||| ||||||||||| | |  |||| | |||||||||||||||||| | || |||||    
T  10929614 ggaaaacatgaaatctctctttgattccgtcattaaattttgcgacaaaggaatttgtgaggggatttaattttttccgtcactaattttcttccctaat 10929515  T
Q  215 tttgctttttctagtagtgtt 235  Q
    |||| |||| | |||||||||    
T  10929514 tttgattttccaagtagtgtt 10929494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 117 - 234
Target Start/End: Complemental strand, 12680301 - 12680185
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatt 215  Q
    ||||||| | |||| ||||||||||||||||| |||||||| ||| ||| ||||| || || ||||| | |||||||||||||||||| ||||  |||||    
T  12680301 ggaaaacgtgaaattcctctctaattccgtcattaaattttacgatcaaagaattcgtgagcaattttattttttccgtcactaattt-cctccttaatt 12680203  T
Q  216 ttgctttttctagtagtgt 234  Q
    || |||||| |||||||||    
T  12680202 tttcttttt-tagtagtgt 12680185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 134 - 191
Target Start/End: Complemental strand, 3673233 - 3673176
Alignment:
Q  134 tctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttttc 191  Q
    |||||||||||||||||||||||| |||||||  ||||||| || |||||||||||||    
T  3673233 tctctaattccgtcactaaattttacgaccaaaaaatttgtgaggaatttcatttttc 3673176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 234
Target Start/End: Complemental strand, 8844252 - 8844167
Alignment:
Q  151 aaattttgcgaccaaggaatttgta-agaaatttcattttt-ccgtcactaatttccctcactaattttgctttttctagtagtgt 234  Q
    |||||||||||||||  |||||||  ||| |||| |||||| |||||||||||||||||| || ||||| ||||||||||||||||    
T  8844252 aaattttgcgaccaataaatttgttgagagattttattttttccgtcactaatttccctccctgatttttctttttctagtagtgt 8844167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 152 - 233
Target Start/End: Complemental strand, 9878596 - 9878515
Alignment:
Q  152 aattttgcgaccaaggaatttgtaagaaatttcatttttccgtcactaatttccctcactaattttgctttttctagtagtg 233  Q
    |||||| ||||||| |||||||| ||  |||| |||||||| ||||||| |||||||  ||||||||||||||||| |||||    
T  9878596 aattttacgaccaaagaatttgttagggattttatttttccatcactaaattccctccataattttgctttttctattagtg 9878515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 11431745 - 11431638
Alignment:
Q  129 atccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca---tttttccgtcactaatttccctcactaattttgctttttc 225  Q
    |||||||| |||||||||||||||||||||| |  || |||||||| ||| |||| |   ||||||||||||||||||  ||| |||||||| |||||      
T  11431745 atccctctttaattccgtcactaaattttgc-aataaagaatttgtgagagattttattttttttccgtcactaatttttctccctaattttacttttct 11431647  T
Q  226 tagtagtgt 234  Q
    |||||||||    
T  11431646 tagtagtgt 11431638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 234
Target Start/End: Original strand, 33191180 - 33191220
Alignment:
Q  194 tcactaatttccctcactaattttgctttttctagtagtgt 234  Q
    ||||||||||||||| |||||||||||||||||| ||||||    
T  33191180 tcactaatttccctcgctaattttgctttttctaatagtgt 33191220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 13251426 - 13251379
Alignment:
Q  186 tttttccgtcactaatttccctcactaattttgctttttctagtagtg 233  Q
    ||||| ||||||||||||| ||| |||||||||||||||||| |||||    
T  13251426 ttttttcgtcactaatttctctctctaattttgctttttctattagtg 13251379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 190
Target Start/End: Original strand, 5270424 - 5270488
Alignment:
Q  127 aaatccctctctaattccgtcactaaattttgcga-ccaaggaatttgtaagaaatttcattttt 190  Q
    |||| |||||||||||||||||||||||||| ||| | ||  ||||||| |||||||| ||||||    
T  5270424 aaattcctctctaattccgtcactaaattttacgatcaaaaaaatttgtgagaaattttattttt 5270488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 1e-48; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 43408636 - 43408510
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||| |||||||||||||||||||||    
T  43408636 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccct 43408537  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    |||||||||||||||||||||||||||    
T  43408536 cactaattttgctttttctagtagtgt 43408510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 44476500 - 44476375
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |  |||||||| |||||||||||||||||||||    
T  44476500 ttagtgaaggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaagaatttcattttttccgtcactaatttccct 44476401  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  44476400 cgctaattttgctttttctagtagtg 44476375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 23858082 - 23857958
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttttccgtcactaatttccctc 208  Q
    ||||||| ||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||    
T  23858082 ttagtgagggaaaacgtaaaatcattctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttcccgtcactaatttccctc 23857983  T
Q  209 actaattttgctttttctagtagtg 233  Q
     ||||||||||||||||||||||||    
T  23857982 gctaattttgctttttctagtagtg 23857958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 112 - 232
Target Start/End: Complemental strand, 28319701 - 28319580
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||| ||||||||||||||||||||||||    
T  28319701 gtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaatttccctcac 28319602  T
Q  211 taattttgctttttctagtagt 232  Q
    ||||||||||||||||||||||    
T  28319601 taattttgctttttctagtagt 28319580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 41637628 - 41637753
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||| || ||||||||||| |||||||||    
T  41637628 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccct 41637727  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  41637728 ccctaattttgctttttctagtagtg 41637753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 117 - 234
Target Start/End: Original strand, 32008970 - 32009089
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca--tttttccgtcactaatttccctcactaat 214  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||  |||||||||||||||||| |||| |||||    
T  32008970 ggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttccgtcactaattttcctcgctaat 32009069  T
Q  215 tttgctttttctagtagtgt 234  Q
    ||||||||||||||||||||    
T  32009070 tttgctttttctagtagtgt 32009089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 117 - 235
Target Start/End: Complemental strand, 28841459 - 28841340
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcactaatt 215  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||| ||||||||||||| ||||||    
T  28841459 ggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgttactaatttccctcgctaatt 28841360  T
Q  216 ttgctttttctagtagtgtt 235  Q
    |||||||| |||||||||||    
T  28841359 ttgcttttcctagtagtgtt 28841340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 13788180 - 13788054
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||| |||||||||||| ||||||||    
T  13788180 ttagtgagggaaaatgtaaaatccctctctaatttcgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactgatttccct 13788081  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||||||||||||||||||||    
T  13788080 cgctaattttgctttttctagtagtgt 13788054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 12779610 - 12779735
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||| ||||||||||| |||||||||||||||||||||| |||||||| || ||||||| ||||||||||||||||||||||    
T  12779610 ttagtgagggaaaacgtaaaattcctctctaatttcgtcactaaattttgcgaccaatgaatttgtgaggaatttcattttttccgtcactaatttccct 12779709  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  12779710 cgctaattttgctttttctagtagtg 12779735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 18551378 - 18551253
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| || |||||||| ||||||||||||||||| |||    
T  18551378 ttagtgagggaaaacataaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtcactaattttcct 18551279  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||| ||||||||    
T  18551278 cgctaattttgctttttttagtagtg 18551253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 37552237 - 37552362
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||  |||||||||||||||||||||||| |||||||||||||||| |||||||| || ||||||| ||||||||||||||||||||||    
T  37552237 ttagtgagggaaaatgtaaaatccctctctaattccgtcattaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 37552336  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  37552337 cgctaattttgctttttctagtagtg 37552362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 41736182 - 41736307
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||  |||||||||||||||||| |||||||||||||||||| |||||||||||| || ||||||| ||||||||||||||||||||||    
T  41736182 ttagtgagggaaaatgtaaaatccctctctaatttcgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccgtcactaatttccct 41736281  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  41736282 cgctaattttgctttttctagtagtg 41736307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 44722942 - 44723069
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    |||||||  ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||| ||| ||||||||||    
T  44722942 ttagtgagagaaaatatgaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtaaggaatttcattttttccatcattaatttccct 44723041  T
Q  208 cactaattttgctttttctagtagtgtt 235  Q
    | ||||||||||||||||||||||||||    
T  44723042 cgctaattttgctttttctagtagtgtt 44723069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 112 - 233
Target Start/End: Complemental strand, 22140486 - 22140364
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcac 210  Q
    ||||| |||||| | |||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||| ||||||||||||||||||||||      
T  22140486 gtgaaagaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaatttccctcgt 22140387  T
Q  211 taattttgctttttctagtagtg 233  Q
    |||||||||||||||||||||||    
T  22140386 taattttgctttttctagtagtg 22140364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 109 - 239
Target Start/End: Original strand, 7093578 - 7093709
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| ||||||||||||||||||  |||||||||||||||||||||  ||||||| || ||||||| ||||||||||||||||||||||    
T  7093578 ttagtgagggaaaacgtaaaatccctctctaattttgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactaatttccct 7093677  T
Q  208 cactaattttgctttttctagtagtgttattc 239  Q
    | |||||||||||||| ||||||||| |||||    
T  7093678 cgctaattttgcttttactagtagtggtattc 7093709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 32300464 - 32300579
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||| ||||||||||||||||||||||| |    
T  32300464 gtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaatttccctcgc 32300563  T
Q  211 taattttgctttttct 226  Q
    ||||||||||||||||    
T  32300564 taattttgctttttct 32300579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 14757246 - 14757120
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||| || |||||||| |||||||||| |||||| | |    
T  14757246 ttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcattaattttctt 14757147  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||||||||||||||||||||    
T  14757146 cgctaattttgctttttctagtagtgt 14757120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 112 - 233
Target Start/End: Complemental strand, 21293833 - 21293711
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | ||||| ||||||||||||||||||||||||| |||||| ||||||||| ||||||||||| |||||||||||||||||||||| |    
T  21293833 gtgagggaaaacgtgaaatctctctctaattccgtcactaaattttacgaccatggaatttgtgagaaatttcattttttccgtcactaatttccctcgc 21293734  T
Q  211 taattttgctttttctagtagtg 233  Q
    |||||||| ||||||||||||||    
T  21293733 taattttgttttttctagtagtg 21293711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 13613218 - 13613093
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||| |||| |||||||||||| |||    
T  13613218 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcatttttttcgtcactaattttcct 13613119  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | |||||||| ||||||| |||||||    
T  13613118 cgctaatttttctttttccagtagtg 13613093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 29749528 - 29749403
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||| || ||||| || ||||||||||| |||||||||    
T  29749528 ttagtgagggaaaacatgaaatccctccctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttatgttttccgtcacaaatttccct 29749429  T
Q  208 cactaattttgctttttctagtagtg 233  Q
      ||||||||||||||||||||||||    
T  29749428 tcctaattttgctttttctagtagtg 29749403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 30783348 - 30783473
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| || ||||| || ||||||||||| |||||||||    
T  30783348 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaatgaatttgtgaggaattttatgttttccgtcacaaatttccct 30783447  T
Q  208 cactaattttgctttttctagtagtg 233  Q
      |||||||||||||| |||||||||    
T  30783448 tcctaattttgcttttcctagtagtg 30783473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 127 - 233
Target Start/End: Complemental strand, 20065181 - 20065074
Alignment:
Q  127 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcattttt-ccgtcactaatttccctcactaattttgctttttc 225  Q
    ||||||||||||||||| |||||||||||||||||||| | ||||||| || |||||||||||| |||||||||||||||||| ||||||||||||||||    
T  20065181 aaatccctctctaattcagtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttc 20065082  T
Q  226 tagtagtg 233  Q
    ||||||||    
T  20065081 tagtagtg 20065074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 26687816 - 26687690
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca--tttttccgtcactaatttccc 206  Q
    ||||||| ||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||| |||||||| |  ||||||||||| |||||||||    
T  26687816 ttagtgacggaaaacatgaaatccatctctaattccgtcactaaattttgcaaccaaggaatttgtgagaaattttatttttttccgtcattaatttccc 26687717  T
Q  207 tcactaattttgctttttctagtagtg 233  Q
    ||  |||||||||||| ||||||||||    
T  26687716 tccttaattttgctttatctagtagtg 26687690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 112 - 233
Target Start/End: Complemental strand, 15636857 - 15636735
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | |||||||||||||||| ||||||||||||||||||||| | ||||||| || |||||||| |||||||||||||||||||||| |    
T  15636857 gtgagggaaaacgtgaaatccctctctaatttcgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgc 15636758  T
Q  211 taattttgctttttctagtagtg 233  Q
    |||||||||||||||| ||||||    
T  15636757 taattttgctttttctggtagtg 15636735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 1141549 - 1141664
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | ||||||||||||||||| |||||||||||||||||||| | ||||||| || ||||||| ||||||||||||||||||||||| |    
T  1141549 gtgagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgc 1141648  T
Q  211 taattttgctttttct 226  Q
    ||||||||||||||||    
T  1141649 taattttgctttttct 1141664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 139 - 233
Target Start/End: Complemental strand, 27040003 - 27039908
Alignment:
Q  139 aattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcattttt-ccgtcactaatttccctcactaattttgctttttctagtagtg 233  Q
    |||||||||||||||||||||||||||| ||||||| || |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  27040003 aattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctagtagtg 27039908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 27327626 - 27327753
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||| ||||||||||||||||||||||| | ||||||||||| || ||||| || ||||||||||| ||||||| |    
T  27327626 ttagtgagggaaaacatgaaatccctctttaattccgtcactaaattttgcgtctaaggaatttgtgaggaattttatgttttccgtcacaaatttccat 27327725  T
Q  208 cactaattttgctttttctagtagtgtt 235  Q
    | |||||||||||||| |||||||||||    
T  27327726 ccctaattttgcttttcctagtagtgtt 27327753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 26243446 - 26243320
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcattttt-ccgtcactaatttccct 207  Q
    ||||||| | ||||| |||||| |||||||||||||||||||||||||| ||||||| |||||||| || ||||| |||||| ||| |||||||||||||    
T  26243446 ttagtgaggaaaaacgtaaaattcctctctaattccgtcactaaattttacgaccaatgaatttgtgaggaattttatttttaccgccactaatttccct 26243347  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    |  ||||||||||||||||||||||||    
T  26243346 cgttaattttgctttttctagtagtgt 26243320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 112 - 233
Target Start/End: Original strand, 32185845 - 32185967
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | ||||||||||||||||||||||||||||||| |||||| | ||||||  || ||||||| ||||||||||||||||||||||| |    
T  32185845 gtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatgaaatttgcgaggaatttcattttttccgtcactaatttccctcgc 32185944  T
Q  211 taattttgctttttctagtagtg 233  Q
    |||||||| ||||||||||||||    
T  32185945 taattttgttttttctagtagtg 32185967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 112 - 232
Target Start/End: Complemental strand, 23388500 - 23388379
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | |||||||||||||||||||||||||||||||||||||| | ||||||| |  |||||||| ||||||||||| |||||||||| |    
T  23388500 gtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaagaatttcattttttccgtcaccaatttccctcgc 23388401  T
Q  211 taattttgctttttctagtagt 232  Q
    |||||||| |||||||||||||    
T  23388400 taattttgttttttctagtagt 23388379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 117 - 233
Target Start/End: Original strand, 31266372 - 31266489
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcactaatt 215  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||| || |||||||| |  |||||||||| ||||||    
T  31266372 ggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtaaaaaatttccctccctaatt 31266471  T
Q  216 ttgctttttctagtagtg 233  Q
    || ||||| |||||||||    
T  31266472 ttacttttcctagtagtg 31266489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 37724117 - 37723992
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| | ||||||||| ||||| ||||||||||||||||||||||| |||||||| || |||||||| |||||||||||||||||||||    
T  37724117 ttagtgagggaaaacgtgaaatccctcgctaataccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 37724018  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | || ||||| |||||||||| ||||    
T  37724017 cgctgatttttctttttctagcagtg 37723992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 36550846 - 36550971
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttttccgtcactaatttccctc 208  Q
    ||||||| ||||||||| |||||||||| ||||||| ||||||||||||||||||||  || |||| ||  ||||  ||||||| |||||||||||||||    
T  36550846 ttagtgagggaaaacatgaaatccctctataattccatcactaaattttgcgaccaaataacttgtgagggatttattttttccatcactaatttccctc 36550945  T
Q  209 actaattttgctttttctagtagtgt 234  Q
     ||||||||| |||||||||||||||    
T  36550946 tctaattttgttttttctagtagtgt 36550971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 40018812 - 40018937
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||| |||||||||||  ||||| |||||||| ||||| ||||||||||||||||| | ||||||||||||||||||||||    
T  40018812 ttagtgagggaaaacatgaaatctctctctaattctctcactgaattttgcaaccaacgaatttgtaagaaattttattttttccgtcactaatttccct 40018911  T
Q  208 cactaattttgctttttctagtagtg 233  Q
       |||||||| ||||||||||||||    
T  40018912 ttttaattttgttttttctagtagtg 40018937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 112 - 235
Target Start/End: Original strand, 28262377 - 28262501
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | |||||||||||||||||||||||||||||||| ||||| | ||||||| || ||||||| ||||||| ||||||||||||||  |    
T  28262377 gtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatttgtgaggaatttcattttttccatcactaatttcccttgc 28262476  T
Q  211 taattttgctttttctagtagtgtt 235  Q
    ||||||| |||||||||||| ||||    
T  28262477 taattttactttttctagtaatgtt 28262501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 117 - 228
Target Start/End: Complemental strand, 38362388 - 38362276
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcattttt-ccgtcactaatttccctcactaatt 215  Q
    ||||||| |||||||| | |||||||| |||||| |||||| ||||||| |||||||| || |||||||||||| ||||||||||||||||| |||||||    
T  38362388 ggaaaacgtaaaatccttttctaattctgtcacttaattttacgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcccttactaatt 38362289  T
Q  216 ttgctttttctag 228  Q
    |||||||||||||    
T  38362288 ttgctttttctag 38362276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 112 - 233
Target Start/End: Original strand, 8430309 - 8430431
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttt-tccgtcactaatttccctcac 210  Q
    |||| ||||||| | ||||||||||||||||||||||||||||||| ||| ||   ||||||| || ||||| ||||| ||||||||||||||||| | |    
T  8430309 gtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgatcataaaatttgtgaggaattttattttttccgtcactaatttcccccgc 8430408  T
Q  211 taattttgctttttctagtagtg 233  Q
    |||||||| ||||||||||||||    
T  8430409 taattttgttttttctagtagtg 8430431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 18916517 - 18916411
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttttccgtcactaatttccctcactaattt 216  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||| |||  ||||||| ||  |||| |||||||||||| ||||||||||  |||||||    
T  18916517 ggaaaacatgaaatccctctctaattcagtcactaaattttgcgatcaaaaaatttgtgagggattttatttttccgtcagtaatttccctgcctaattt 18916418  T
Q  217 tgctttt 223  Q
    |||||||    
T  18916417 tgctttt 18916411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 2556130 - 2556234
Alignment:
Q  134 tctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaattttgctttttctagtagt 232  Q
    |||||||||||||||||||||||| | |||||| ||||||| |||||||| | ||||||| |||||||||| |||| |||||||| |||||| |||||||    
T  2556130 tctctaattccgtcactaaattttacaaccaagaaatttgtgagaaattttattttttccatcactaattttcctctctaattttactttttttagtagt 2556229  T
Q  233 gttat 237  Q
    |||||    
T  2556230 gttat 2556234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 109 - 172
Target Start/End: Original strand, 27523021 - 27523084
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 172  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27523021 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 27523084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 35697475 - 35697573
Alignment:
Q  119 aaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaattt 216  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||  ||||||| ||| |||| | ||||||||| ||||||||||||| |||||||    
T  35697475 aaaacatgaaattcctctctaattccgtcactaaattttgcgaccaaaaaatttgtgagagattttattttttccgttactaatttccctccctaattt 35697573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 8763644 - 8763757
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||||||||  || ||||||||||||  || |||| | ||||||||||||||| ||  ||    
T  8763644 ttagtgaaggaaaacatgaaatccatctctaattccgtcattaaattttatgatcaaggaatttgtgcgagattttattttttccgtcactaacttttct 8763743  T
Q  208 cactaattttgctt 221  Q
    | ||||||||||||    
T  8763744 ccctaattttgctt 8763757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 9004433 - 9004308
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcattt-ttccgtcactaatttccct 207  Q
    ||||||| ||||||  ||||||  |||||||||||| |||||||||||||  || ||||||||| | ||||||||||||| ||||||||||||| | |||    
T  9004433 ttagtgagggaaaatgtaaaatttctctctaattccatcactaaattttgtaactaaggaatttatgagaaatttcatttcttccgtcactaatattcct 9004334  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    |  |||||||  ||||||||||||||    
T  9004333 cgttaattttattttttctagtagtg 9004308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 109 - 223
Target Start/End: Complemental strand, 44366122 - 44366007
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| | ||||||| |||||||||||||||||| ||| | ||||||| |||||| |||||||| || ||||| | |||||| |||| ||||||||||    
T  44366122 ttagtgaggaaaaacatgaaatccctctctaattccctcattgaattttgtgaccaacgaatttgtgaggaattttattttttctgtcattaatttccct 44366023  T
Q  208 cactaattttgctttt 223  Q
    | ||||||||| ||||    
T  44366022 ctctaattttgttttt 44366007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 117 - 233
Target Start/End: Complemental strand, 37802495 - 37802379
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatt 215  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||||||  || |||  ||| |||| | |||||||||||  |||||| ||| ||||||    
T  37802495 ggaaaacgtaaaatcagtctctaattccgtcactaaattttgcgaccaa-aaaattgcgagagattttattttttccgtcatcaatttctctccctaatt 37802397  T
Q  216 ttgctttttctagtagtg 233  Q
    |||||||| |||||||||    
T  37802396 ttgcttttcctagtagtg 37802379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 109 - 236
Target Start/End: Original strand, 18609524 - 18609652
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttt-tccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||| ||||||||||| | | || ||||||||||| |||||||||||| ||  |||  ||||| |||||||||||||| |||    
T  18609524 ttagtgagggaaaacatgaaatacctctctaatttcatgacaaaattttgcgatcaaggaatttgtgagggattctattttctccgtcactaattttcct 18609623  T
Q  208 cactaattttgctttttctagtagtgtta 236  Q
    |  || |||| ||||| ||| ||||||||    
T  18609624 ccttatttttacttttcctaatagtgtta 18609652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 111 - 203
Target Start/End: Complemental strand, 31966647 - 31966555
Alignment:
Q  111 agtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttttccgtcactaattt 203  Q
    ||||| ||| ||||| ||||| ||||||||||  || ||||||||||||||||||||||||| || | | |||  ||||||||||||||||||    
T  31966647 agtgagggataacatgaaatctctctctaattatgttactaaattttgcgaccaaggaatttatagggattttattttttccgtcactaattt 31966555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 9590498 - 9590588
Alignment:
Q  127 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttt-tccgtcactaatttccctcactaattt 216  Q
    ||||| ||||||||||  || ||||||||||||||  ||| ||||| ||| | |||||||||| ||||||||||||||||||| |||||||    
T  9590498 aaatcgctctctaattttgttactaaattttgcgatgaagtaatttttaaaagatttcattttttccgtcactaatttccctccctaattt 9590588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 152 - 233
Target Start/End: Complemental strand, 16098999 - 16098917
Alignment:
Q  152 aattttgcgaccaaggaatttgtaagaaatttcatttttcc-gtcactaatttccctcactaattttgctttttctagtagtg 233  Q
    |||||||| ||||||||| |||| ||| |||| |||||| | || ||||||||||||| ||||||||| ||||||||||||||    
T  16098999 aattttgcaaccaaggaaattgtgagagatttaattttttctgttactaatttccctccctaattttgatttttctagtagtg 16098917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 22192232 - 22192314
Alignment:
Q  152 aattttgcgaccaaggaatttgtaagaaatttcatttt-tccgtcactaatttccctcactaattttgctttttctagtagtg 233  Q
    ||||||| ||||||  ||||||| ||| |||| ||||| ||||||||||||||| ||| || |||||||||||||||||||||    
T  22192232 aattttgtgaccaataaatttgtgagagattttattttttccgtcactaatttctctccctgattttgctttttctagtagtg 22192314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 29998684 - 29998633
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcg 160  Q
    |||| |||||||||| | |||||| |||||||||||||||||||||||||||    
T  29998684 ttagagaaggaaaacgtgaaatccttctctaattccgtcactaaattttgcg 29998633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 12860276 - 12860235
Alignment:
Q  186 tttttccgtcactaatttccctcactaattttgctttttcta 227  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  12860276 tttttccgtcactaattttcctccctaattttgctttttcta 12860235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 234
Target Start/End: Original strand, 36373934 - 36374034
Alignment:
Q  135 ctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaattttgctttttctagtagtg 233  Q
    ||||||||| ||||||||||||| ||| |||||||||||  ||  |||| | |||||||||| |||| ||  ||| ||||||||| |||| |||||||||    
T  36373934 ctctaattcagtcactaaattttacgatcaaggaatttgagagggattttattttttccgtcgctaaatttactccctaattttgtttttcctagtagtg 36374033  T
Q  234 t 234  Q
    |    
T  36374034 t 36374034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 2e-47; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 109 - 236
Target Start/End: Original strand, 19865258 - 19865386
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||    
T  19865258 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaattttcct 19865357  T
Q  208 cactaattttgctttttctagtagtgtta 236  Q
    | |||||||| ||||||||||||||||||    
T  19865358 cgctaattttactttttctagtagtgtta 19865386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 28229580 - 28229453
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||    
T  28229580 ttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 28229481  T
Q  208 cactaattttgctttttctagtagtgtt 235  Q
    | ||||||||||||||||||||||||||    
T  28229480 cgctaattttgctttttctagtagtgtt 28229453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 6459231 - 6459357
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  6459231 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 6459330  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | ||||||| |||||||||||||||||    
T  6459331 cgctaatttcgctttttctagtagtgt 6459357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 4340421 - 4340550
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  4340421 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 4340520  T
Q  208 cactaattttgctttttctagtagtgttat 237  Q
      |||||||||||||||||| |||||||||    
T  4340521 tgctaattttgctttttctaatagtgttat 4340550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 9110100 - 9109975
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||| |||||||||||||||||||||    
T  9110100 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccct 9110001  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  9110000 cgctaattttgctttttctagtagtg 9109975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 12720823 - 12720948
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||| | ||||||||||||||||||||||    
T  12720823 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttattttttccgtcactaatttccct 12720922  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  12720923 cgctaattttgctttttctagtagtg 12720948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 41752447 - 41752572
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||| | |||||||||||||||||||| |    
T  41752447 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaaaaattttattttttccgtcactaatttccgt 41752546  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    ||||||||||||||||||||||||||    
T  41752547 cactaattttgctttttctagtagtg 41752572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 45839306 - 45839431
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  45839306 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 45839405  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    |  |||||||||||||||||||||||    
T  45839406 cgttaattttgctttttctagtagtg 45839431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 50845455 - 50845329
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||| || ||||||||||| |||||||||    
T  50845455 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccct 50845356  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||||||||||||||||||||    
T  50845355 ccctaattttgctttttctagtagtgt 50845329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 109 - 236
Target Start/End: Original strand, 46790014 - 46790142
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||| ||||||||||||| |||||||||||||||| |||||||| || ||||||| ||||||||||||||||||||||    
T  46790014 ttagtgagggaaaacgtaaaatccctttctaattccgtcattaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 46790113  T
Q  208 cactaattttgctttttctagtagtgtta 236  Q
    | |||||||||||||||||||||||||||    
T  46790114 cgctaattttgctttttctagtagtgtta 46790142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 6412178 - 6412051
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||| || |||||||| |||||||| ||||||||||||    
T  6412178 ttagtgagggaaaacatgaaatccctctttaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgttactaatttccct 6412079  T
Q  208 cactaattttgctttttctagtagtgtt 235  Q
    | ||||||||||||||||||||||||||    
T  6412078 cgctaattttgctttttctagtagtgtt 6412051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 109 - 227
Target Start/End: Complemental strand, 46786083 - 46785964
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||    
T  46786083 ttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgaccaaggaacttgtgagaaatttcattttttccgtcactaatttccct 46785984  T
Q  208 cactaattttgctttttcta 227  Q
    | ||||||||||||||||||    
T  46785983 cgctaattttgctttttcta 46785964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 41120862 - 41120736
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||| |||||| ||||||||||||||    
T  41120862 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccatcactaatttccct 41120763  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||||||||||||| ||||||    
T  41120762 cgctaattttgctttttctattagtgt 41120736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 8941119 - 8940994
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||| |||||||||||||||| ||||||||| ||| |||||||||||| ||||||||||| |||||||||||||||||||||    
T  8941119 ttagtgagggaaaacgtaaaattcctctctaattccgtcgctaaattttacgatcaaggaatttgtgagaaatttcattttttccgtcactaatttccct 8941020  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  8941019 cgctaattttgctttttctagtagtg 8940994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 117 - 234
Target Start/End: Complemental strand, 46339562 - 46339444
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcactaatt 215  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||||||||||| |||| ||||||    
T  46339562 ggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaatt 46339463  T
Q  216 ttgctttttctagtagtgt 234  Q
    |||||||||||||||||||    
T  46339462 ttgctttttctagtagtgt 46339444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 14760881 - 14761007
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||| || ||||| || ||||||||||| |||||||||    
T  14760881 ttagtgagggaaaacatgaaatccctcactaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccgtcacaaatttccct 14760980  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    |  ||||||||||||||||||||||||    
T  14760981 ctttaattttgctttttctagtagtgt 14761007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 112 - 233
Target Start/End: Complemental strand, 20408282 - 20408160
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | |||||||||||||||||||| ||||||||||||||||| ||||||||| || |||||||| ||||||||||||||||| |||| |    
T  20408282 gtgagggaaaacgtgaaatccctctctaattccgttactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaattttcctcgc 20408183  T
Q  211 taattttgctttttctagtagtg 233  Q
    |||||||||||||||||||||||    
T  20408182 taattttgctttttctagtagtg 20408160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 15243099 - 15243228
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| | |||||||| |||||||||||||||||||||||||| |||||||||||| || ||||||| ||||||||||||||||||| ||    
T  15243099 ttagtgagggaaaacgtgaaatccctatctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccgtcactaatttctct 15243198  T
Q  208 cactaattttgctttttctagtagtgttat 237  Q
    | || ||||| |||||||||||||||||||    
T  15243199 cgctgatttttctttttctagtagtgttat 15243228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 22603562 - 22603687
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| ||||||| ||||||||||||||||||||||||||||| ||| |||||||| || ||||||| ||||||| ||||||||||||||    
T  22603562 ttagtgagggaaaacgtaaaatcgctctctaattccgtcactaaattttgcgatcaaagaatttgtgaggaatttcattttttccatcactaatttccct 22603661  T
Q  208 cactaattttgctttttctagtagtg 233  Q
      ||||||||||||||||||||||||    
T  22603662 tgctaattttgctttttctagtagtg 22603687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 29549432 - 29549557
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||| ||||| ||  ||||||| |||||||| | ||||| ||||||||||||||||    
T  29549432 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaatttcgcgactaaaaaatttgtgagaaattttatttttttcgtcactaatttccct 29549531  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  29549532 cgctaattttgctttttctagtagtg 29549557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 9464120 - 9464235
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||| |||||||||||||||||||| ||||    
T  9464120 gtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaatttccgtcac 9464219  T
Q  211 taattttgctttttct 226  Q
    ||||||| ||||||||    
T  9464220 taattttactttttct 9464235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 127 - 232
Target Start/End: Complemental strand, 25788104 - 25787998
Alignment:
Q  127 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgt-aagaaatttcatttttccgtcactaatttccctcactaattttgctttttc 225  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| | ||| |||| |||||||||||||||||| |||| ||||||||||||||||    
T  25788104 aaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttcttttttccgtcactaattttcctcgctaattttgctttttc 25788005  T
Q  226 tagtagt 232  Q
    |||||||    
T  25788004 tagtagt 25787998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 112 - 233
Target Start/End: Complemental strand, 50092420 - 50092298
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcac 210  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||| || || | ||||||| || |||||||| |||||||||||||||||||||| |    
T  50092420 gtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgatcatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgc 50092321  T
Q  211 taattttgctttttctagtagtg 233  Q
    ||||||| |||||||||||||||    
T  50092320 taatttttctttttctagtagtg 50092298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 7830045 - 7830170
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||| || |||||| |||  |||||||||    
T  7830045 ttagtgagggaaaacatgaaatccctccctaatttcgtcactaaattttgcgaccaaggaatttgtgagaaattttatgttttccatcataaatttccct 7830144  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | |||||||||||||| |||||||||    
T  7830145 ccctaattttgcttttcctagtagtg 7830170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 9177114 - 9177239
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| | ||||| |||||||||||| ||||| ||||||||||||||||||||||| ||||||| || ||||||| ||||||||| ||||||||||||    
T  9177114 ttagtgaggaaaaacgtaaaatccctctttaatttcgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgttactaatttccct 9177213  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||| ||||||||||||||    
T  9177214 cgctaattttgttttttctagtagtg 9177239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 13102330 - 13102455
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |  ||||| || ||||||||||| |||||||||    
T  13102330 ttagtgagggaaaacataaaatctctttctaattccgtcactaaattttgcgaccaaggaatttgtgatgaattttatgttttccgtcacaaatttccct 13102429  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    |  ||||||||||||| |||||||||    
T  13102430 ccttaattttgcttttcctagtagtg 13102455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 112 - 235
Target Start/End: Original strand, 23457914 - 23458038
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | |||||||||||||||||||||||||||||||||||||| | ||||||| || ||||||| ||||||||||| |||||| |||| |    
T  23457914 gtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcaataattttcctcgc 23458013  T
Q  211 taattttgctttttctagtagtgtt 235  Q
    ||||||| |||||||||||||||||    
T  23458014 taattttactttttctagtagtgtt 23458038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 109 - 208
Target Start/End: Complemental strand, 41071960 - 41071860
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttt-tccgtcactaatttccct 207  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||| ||||||||||||||||||    
T  41071960 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttctccgtcactaatttccct 41071861  T
Q  208 c 208  Q
    |    
T  41071860 c 41071860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 17200135 - 17200008
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| | |||| ||||||| | ||| |||||||||||||||||||||||||||| |||||||| || |||||||| |||||||||||| ||||||||    
T  17200135 ttagtgaggaaaaatataaaattcttctttaattccgtcactaaattttgcgaccaatgaatttgtgaggaatttcattttttccgtcactgatttccct 17200036  T
Q  208 cactaattttgctttttctagtagtgtt 235  Q
    | ||||||||| ||||||||||||||||    
T  17200035 cgctaattttgttttttctagtagtgtt 17200008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 112 - 233
Target Start/End: Original strand, 12161831 - 12161953
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | |||||||||||||||||||||||||||||||||||||| | ||||||| || ||||||| ||||||||||| |||||| |||| |    
T  12161831 gtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcaataattttcctcgc 12161930  T
Q  211 taattttgctttttctagtagtg 233  Q
    ||||||| |||||||||||||||    
T  12161931 taattttactttttctagtagtg 12161953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 112 - 233
Target Start/End: Original strand, 22158819 - 22158941
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | |||||||||||||||||||||||||||||||||||||| | ||||||| || ||||||| |||||| |||||||||||||||| |    
T  22158819 gtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttctgtcactaatttccctcgc 22158918  T
Q  211 taattttgctttttctagtagtg 233  Q
    ||||||| |||||||| ||||||    
T  22158919 taattttactttttctggtagtg 22158941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 112 - 233
Target Start/End: Original strand, 52183695 - 52183817
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | |||||||||||||||||||||||||||||||||||||| | ||||||| || ||||| | ||||||||||| |||||||||||      
T  52183695 gtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaattttattttttccgtcattaatttccctcgt 52183794  T
Q  211 taattttgctttttctagtagtg 233  Q
    |||||||||||||||||||||||    
T  52183795 taattttgctttttctagtagtg 52183817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 117 - 233
Target Start/End: Original strand, 19081750 - 19081867
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatt 215  Q
    ||||||| | ||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||| | ||||||| ||||||||||||||| ||||||    
T  19081750 ggaaaacgtgaaatccctctctaattctgtcactaaattttacgaccaaggaatttgtgagaaattttattttttccatcactaatttccctctctaatt 19081849  T
Q  216 ttgctttttctagtagtg 233  Q
    || |||||| ||||||||    
T  19081850 ttactttttttagtagtg 19081867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 117 - 233
Target Start/End: Original strand, 19129638 - 19129755
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatt 215  Q
    ||||||| | ||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||| | ||||||| ||||||||||||||| ||||||    
T  19129638 ggaaaacgtgaaatccctctctaattctgtcactaaattttacgaccaaggaatttgtgagaaattttattttttccatcactaatttccctctctaatt 19129737  T
Q  216 ttgctttttctagtagtg 233  Q
    || |||||| ||||||||    
T  19129738 ttactttttttagtagtg 19129755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 117 - 237
Target Start/End: Complemental strand, 38531287 - 38531166
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatt 215  Q
    ||||||| | ||||| |||||||||||| ||||||||||||||||| ||||||||||| || ||||| | ||||||||||||| ||||||||| ||||||    
T  38531287 ggaaaacgtgaaatctctctctaattccatcactaaattttgcgactaaggaatttgtgaggaattttattttttccgtcacttatttccctccctaatt 38531188  T
Q  216 ttgctttttctagtagtgttat 237  Q
    || |||||||||||||||||||    
T  38531187 ttactttttctagtagtgttat 38531166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 110 - 233
Target Start/End: Original strand, 48522533 - 48522657
Alignment:
Q  110 tagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctc 208  Q
    |||||| ||||||||| |||| |||||  |||||||||||||||||||||||||||  ||||||| |||||||| | |||||| ||||||||||| ||||    
T  48522533 tagtgagggaaaacatgaaattcctcttaaattccgtcactaaattttgcgaccaaaaaatttgtgagaaattttattttttctgtcactaattttcctc 48522632  T
Q  209 actaattttgctttttctagtagtg 233  Q
     ||||||||||||||||||||||||    
T  48522633 gctaattttgctttttctagtagtg 48522657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 119 - 233
Target Start/End: Complemental strand, 9985442 - 9985327
Alignment:
Q  119 aaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatttt 217  Q
    ||||| |||||||||||||||||||||||| |||||||| ||||||| |||||||| || ||||| | ||||||||||||||||||||||  ||||||||    
T  9985442 aaaacgtaaaatccctctctaattccgtcaataaattttacgaccaaagaatttgtgaggaatttgattttttccgtcactaatttcccttgctaatttt 9985343  T
Q  218 gctttttctagtagtg 233  Q
    | ||||||||||||||    
T  9985342 gttttttctagtagtg 9985327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 117 - 234
Target Start/End: Complemental strand, 7181672 - 7181554
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaattt-catttttccgtcactaatttccctcactaatt 215  Q
    ||||||| | |||||||||||||||||||||||||||||||| ||||| | ||| ||| || ||||| | ||||||||||||||||||||||  ||||||    
T  7181672 ggaaaacgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatatgtgaggaattttcttttttccgtcactaatttcccttgctaatt 7181573  T
Q  216 ttgctttttctagtagtgt 234  Q
    |||||||||||||||||||    
T  7181572 ttgctttttctagtagtgt 7181554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 18895025 - 18894899
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||| |||| ||| ||  |||| | ||||| |||||||||||| |||    
T  18895025 ttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatatgtgaggtattttatttttttcgtcactaattttcct 18894926  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||||||||| ||||||||||    
T  18894925 cgctaattttgcttttcctagtagtgt 18894899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 134 - 235
Target Start/End: Complemental strand, 27253955 - 27253853
Alignment:
Q  134 tctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaattttgctttttctagtagt 232  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||||| |||||| |||| |||||||| ||||||||||||||    
T  27253955 tctctaattccgtcactaaattttgcgaccatggaatttgtgagaaattttattttttccgtcattaattttcctccctaatttttctttttctagtagt 27253856  T
Q  233 gtt 235  Q
    |||    
T  27253855 gtt 27253853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 112 - 232
Target Start/End: Complemental strand, 9259305 - 9259184
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaa-tttcatttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | ||||| |||||||||||||||||||||||||||||||| | ||||||| ||||| |||| |||||||||||||||||| ||||      
T  9259305 gtgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgagaaattttcttttttccgtcactaattttcctcgt 9259206  T
Q  211 taattttgctttttctagtagt 232  Q
    |||||||| |||||||||||||    
T  9259205 taattttgttttttctagtagt 9259184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 134 - 235
Target Start/End: Complemental strand, 20290420 - 20290319
Alignment:
Q  134 tctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttttccgtcactaatttccctcactaattttgctttttctagtagtg 233  Q
    |||||||||||||||||||||||| || ||| | ||||||| || |||||||||||||||||||||||||||||| |||||||| |||||||||| ||||    
T  20290420 tctctaattccgtcactaaattttacggccatgaaatttgtgaggaatttcatttttccgtcactaatttccctcgctaattttactttttctagcagtg 20290321  T
Q  234 tt 235  Q
    ||    
T  20290320 tt 20290319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 117 - 234
Target Start/End: Complemental strand, 12370058 - 12369950
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttttccgtcactaatttccctcactaattt 216  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||       |||   ||||||||||||||||||||||| |||||||    
T  12370058 ggaaaacataaaatccttctctaattccgtcactaaattttgcgaccaaagaattt------catt---tttttccgtcactaatttccctcgctaattt 12369968  T
Q  217 tgctttttctagtagtgt 234  Q
    ||||||||||||||||||    
T  12369967 tgctttttctagtagtgt 12369950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 133 - 235
Target Start/End: Original strand, 51973462 - 51973565
Alignment:
Q  133 ctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcattttt-ccgtcactaatttccctcactaattttgctttttctagtag 231  Q
    ||||||||||||||||||||||||||||||||  || ||| | || |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||    
T  51973462 ctctctaattccgtcactaaattttgcgaccatagattttatgaggaatttcattttttccgttactaatttccctcgctaattttgctttttctagtag 51973561  T
Q  232 tgtt 235  Q
    ||||    
T  51973562 tgtt 51973565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 118 - 223
Target Start/End: Complemental strand, 30928494 - 30928388
Alignment:
Q  118 gaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaattt 216  Q
    |||||||| ||||  |||||||||||  ||||||||||||||||||||||||||||| ||| |||| | ||||||||||||||||||||||| |||||||    
T  30928494 gaaaacatgaaatttctctctaattctctcactaaattttgcgaccaaggaatttgttagagattttattttttccgtcactaatttccctctctaattt 30928395  T
Q  217 tgctttt 223  Q
    |||||||    
T  30928394 tgctttt 30928388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 117 - 233
Target Start/End: Original strand, 12989874 - 12989991
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatt 215  Q
    ||||||| | ||||| ||| ||||||| ||||||||| |||||||||||||||||||| |||||||| | |||||||||||| |||||| ||| ||||||    
T  12989874 ggaaaacgtgaaatctctccctaattcagtcactaaactttgcgaccaaggaatttgtgagaaattttattttttccgtcaccaatttctctctctaatt 12989973  T
Q  216 ttgctttttctagtagtg 233  Q
    ||||||||| ||||||||    
T  12989974 ttgctttttttagtagtg 12989991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 117 - 229
Target Start/End: Complemental strand, 16913694 - 16913581
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatt 215  Q
    ||||||||| |||||||||||||||||||| | |||||||| |||| ||||||||||| || ||||| | ||||||||||||||||||||||  ||||||    
T  16913694 ggaaaacatgaaatccctctctaattccgttattaaattttacgactaaggaatttgtgaggaattttattttttccgtcactaatttcccttcctaatt 16913595  T
Q  216 ttgctttttctagt 229  Q
    |||||||| |||||    
T  16913594 ttgcttttcctagt 16913581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 118 - 226
Target Start/End: Complemental strand, 18890665 - 18890556
Alignment:
Q  118 gaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcactaattt 216  Q
    |||||| | |||||||||||||||||||| |||||||||||||||||   ||||||| || |||||||| |||||| ||||||||||||||| |||||||    
T  18890665 gaaaacgtgaaatccctctctaattccgttactaaattttgcgaccattaaatttgtgaggaatttcattttttccatcactaatttccctcgctaattt 18890566  T
Q  217 tgctttttct 226  Q
    ||||||||||    
T  18890565 tgctttttct 18890556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 109 - 200
Target Start/End: Original strand, 41359001 - 41359094
Alignment:
Q  109 ttagtgaaggaaaacataaaa-tccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaa 200  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| || ||||||| |||||||||||||||    
T  41359001 ttagtgagggaaaacataaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaa 41359094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 117 - 233
Target Start/End: Original strand, 20580931 - 20581049
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca--tttttccgtcactaatttccctcactaat 214  Q
    ||||||| | |||||||||||||||| ||| | ||||||||||||| ||||||||||| |||||||| |  ||||||| ||||||||||||||| |||||    
T  20580931 ggaaaacgtgaaatccctctctaatttcgtaattaaattttgcgactaaggaatttgtgagaaatttaatttttttccatcactaatttccctctctaat 20581030  T
Q  215 tttgctttttctagtagtg 233  Q
    ||| |||||| ||||||||    
T  20581031 tttactttttttagtagtg 20581049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 112 - 233
Target Start/End: Original strand, 17661067 - 17661189
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcac 210  Q
    |||| ||||||| | |||| ||||||||||||| ||||||||||||||||||| | ||||||| || ||||| | |||||||||||||||||||| ||      
T  17661067 gtgagggaaaacgtgaaattcctctctaattccatcactaaattttgcgaccatgaaatttgtgaggaattttattttttccgtcactaatttccgtcgt 17661166  T
Q  211 taattttgctttttctagtagtg 233  Q
    ||||||||||||||||| |||||    
T  17661167 taattttgctttttctaatagtg 17661189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 110 - 203
Target Start/End: Original strand, 32046891 - 32046985
Alignment:
Q  110 tagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaattt 203  Q
    |||||| ||||||| ||||||| ||||||||||||| |||||||||||||||||||| ||||||| || ||||||| ||||||||||||||||||    
T  32046891 tagtgagggaaaacgtaaaatctctctctaattccgacactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaattt 32046985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 41063211 - 41063337
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| | ||||||||||||| ||||||||||||||||||||||||||||| ||| |||| ||| ||  |||| | |||||||||||||||||| |||    
T  41063211 ttagtgaggaaaaacataaaatctctctctaattccgtcactaaattttgcgatcaaagaatatgtgagggattttattttttccgtcactaattttcct 41063310  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
       ||||||| ||||||||||||||||    
T  41063311 tcttaattttactttttctagtagtgt 41063337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 13308945 - 13308820
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| | ||||||| |||||||||||||||| | ||||||||||||||||||||  ||||||| || ||||| | |||||| | |||||||||||||    
T  13308945 ttagtgaggaaaaacatgaaatccctctctaatttcatcactaaattttgcgaccaataaatttgtgaggaattttattttttcggacactaatttccct 13308846  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||| |||| |||||||||    
T  13308845 ctctaattttgtttttcctagtagtg 13308820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 46865275 - 46865384
Alignment:
Q  127 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttt-tccgtcactaatttccctcactaattttgctttttc 225  Q
    |||||||||||||||||| | ||||||||||||| ||||| ||||||| ||  |||| ||||| ||||||||||||||||||| ||| |||| |||||||    
T  46865275 aaatccctctctaattccattactaaattttgcggccaagaaatttgtgagggattttattttttccgtcactaatttccctccctagtttttctttttc 46865374  T
Q  226 tagtagtgtt 235  Q
    ||||||||||    
T  46865375 tagtagtgtt 46865384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 117 - 235
Target Start/End: Original strand, 11917808 - 11917926
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatttttccgtcactaatttccctcactaattt 216  Q
    ||||||| | || ||||| ||||||||||||||||||||||||||||||  ||||||| ||| ||||  ||||| ||||||| ||||||||| |||||||    
T  11917808 ggaaaacgtgaactccctttctaattccgtcactaaattttgcgaccaaataatttgtgagatattttgttttttcgtcactgatttccctctctaattt 11917907  T
Q  217 tgctttttctagtagtgtt 235  Q
    | ||||| ||| |||||||    
T  11917908 ttcttttcctaatagtgtt 11917926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 117 - 233
Target Start/End: Complemental strand, 22789708 - 22789593
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcactaatt 215  Q
    ||||||| | ||||| || |||||||| |||||||||||||||||||| ||||||||| |||||||| || ||||||||||||||||| |||| ||||||    
T  22789708 ggaaaacgtgaaatctctatctaattcagtcactaaattttgcgaccatggaatttgtgagaaattttatgttttccgtcactaattttcctccctaatt 22789609  T
Q  216 ttgctttttctagtagtg 233  Q
    ||  ||||| ||||||||    
T  22789608 tt--tttttttagtagtg 22789593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 109 - 190
Target Start/End: Complemental strand, 12174891 - 12174810
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcattttt 190  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||| || ||||| ||||||    
T  12174891 ttagtgagggaaaacatgaaatccttctctaattccgtcactaaattttgcgacgaaggaatttgtgaggaattttattttt 12174810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 126 - 234
Target Start/End: Original strand, 13195614 - 13195723
Alignment:
Q  126 aaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgt-aagaaatttcatttttccgtcactaatttccctcactaattttgcttttt 224  Q
    |||||||||||||||||| |||||||||||||||| || ||||||| || | ||| ||| | |||||| |||||||| |||||| |||||||||| ||||    
T  13195614 aaaatccctctctaattctgtcactaaattttgcgtcccaggaattcgtgaggaattttaacttttccatcactaatctccctccctaattttgcatttt 13195713  T
Q  225 ctagtagtgt 234  Q
    ||||||||||    
T  13195714 ctagtagtgt 13195723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 127 - 233
Target Start/End: Complemental strand, 12806944 - 12806836
Alignment:
Q  127 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatt--tcatttttccgtcactaatttccctcactaattttgcttttt 224  Q
    |||||||||| |||||||||||||||||||| |||||||| ||||||| ||| |||  |  |||||| |||||||||||||||| ||||| ||||||||     
T  12806944 aaatccctctataattccgtcactaaattttacgaccaagaaatttgtgagagatttattttttttctgtcactaatttccctccctaatattgcttttc 12806845  T
Q  225 ctagtagtg 233  Q
    ||| |||||    
T  12806844 ctaatagtg 12806836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 13523078 - 13523013
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatt 182  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  13523078 ggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagaaatt 13523013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 109 - 232
Target Start/End: Complemental strand, 17734079 - 17733954
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaatttt-gcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccc 206  Q
    ||||||| ||||||||| ||||| ||| |||||||| ||| |||||||| ||||||||| ||||||| ||| |||| || |||||||||||||| ||  |    
T  17734079 ttagtgagggaaaacatgaaatctctcgctaattccatcattaaatttttgcgaccaagaaatttgtgagagattttatcttttccgtcactaaattttc 17733980  T
Q  207 tcactaattttgctttttctagtagt 232  Q
    || |||||||||||||| ||||||||    
T  17733979 tccctaattttgcttttcctagtagt 17733954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 39748947 - 39749072
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaaga-aatttcatttttccgtcactaatttccct 207  Q
    ||||||||||||||||| ||||||| ||| |||| |||||||||||||||||| |||  || |||  ||| | |||  ||||||||||||||||||| ||    
T  39748947 ttagtgaaggaaaacatgaaatccccctcaaatttcgtcactaaattttgcgatcaaacaaattgcgagagatttttttttttccgtcactaatttcgct 39749046  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    |  ||||||||||||| |||||||||    
T  39749047 ccttaattttgcttttcctagtagtg 39749072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 110 - 233
Target Start/End: Complemental strand, 45919028 - 45918904
Alignment:
Q  110 tagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat--ttttccgtcactaatttccct 207  Q
    |||||| ||| ||||| ||||||||||||||||| || |||||||||||| |||||||||||| | ||  |||||||  ||||||||||| | ||| |||    
T  45919028 tagtgagggataacatcaaatccctctctaattctgttactaaattttgcaaccaaggaatttatgagggatttcatttttttccgtcacaagttttcct 45918929  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | |||||||||| ||| |||| ||||    
T  45918928 c-ctaattttgcatttcctagcagtg 45918904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 18788001 - 18787912
Alignment:
Q  145 gtcactaaattttgcgaccaaggaatttgtaagaaatttcatttttccgtcactaatttccctcactaattttgctttttctagtagtgt 234  Q
    |||||||||||||||||||||  |||||   ||  |||| |||||| |||||||||||||| || |||||||||||||||| ||||||||    
T  18788001 gtcactaaattttgcgaccaaaaaatttaggagggattttattttttcgtcactaatttccatccctaattttgctttttcaagtagtgt 18787912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 117 - 228
Target Start/End: Original strand, 26825262 - 26825374
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgt-aagaaatttcatttttccgtcactaatttccctcactaatt 215  Q
    ||||||| | |||| |||||||||||||||||||||||||| ||| ||| |||||||| | | || ||  |||||||||||||||||| | ||  ||| |    
T  26825262 ggaaaacgtgaaattcctctctaattccgtcactaaattttacgatcaaagaatttgtgagggaagttattttttccgtcactaattttcttccataact 26825361  T
Q  216 ttgctttttctag 228  Q
    |||||||||||||    
T  26825362 ttgctttttctag 26825374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 229
Target Start/End: Complemental strand, 16258589 - 16258490
Alignment:
Q  131 ccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcatt-tttccgtcactaatttccctcactaattttgctttttctagt 229  Q
    |||||| |||||||||||||||||||||| |||||||||| ||| ||| |||| ||| |||||| |||||| || | ||  ||||||||||||| |||||    
T  16258589 ccctctataattccgtcactaaattttgcaaccaaggaatctgtgagatattttattctttccgccactaaattacatccttaattttgcttttcctagt 16258490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 235
Target Start/End: Complemental strand, 29093663 - 29093552
Alignment:
Q  125 taaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaattttgctttt 223  Q
    |||||| ||||||||||||| ||| ||||||||||||  |||||| |||| || ||||| | |||||| |||  || ||||||||  ||||||| |||||    
T  29093663 taaaattcctctctaattccatcattaaattttgcgattaaggaacttgtgaggaattttattttttcggtccttagtttccctccttaattttactttt 29093564  T
Q  224 tctagtagtgtt 235  Q
    ||||||||||||    
T  29093563 tctagtagtgtt 29093552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 219
Target Start/End: Original strand, 49881058 - 49881168
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||| ||||| ||||||||||||||| | || ||||||||||| ||||||||||||| | | | |||| | ||||||||||||||| || |||    
T  49881058 ttagtgagggataacatgaaatccctctctaatcctgttactaaattttgtgaccaaggaatttatgaaagattttattttttccgtcactaactttcct 49881157  T
Q  208 cactaattttgc 219  Q
    | ||||||||||    
T  49881158 c-ctaattttgc 49881168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 119 - 223
Target Start/End: Original strand, 6775911 - 6776015
Alignment:
Q  119 aaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatttt 217  Q
    ||||| |||||| |||||||||||||||  |||| |||||| ||||| |||||||| ||  |||| | ||||||| ||||| ||||||||| ||||||||    
T  6775911 aaaacttaaaattcctctctaattccgttgctaagttttgcaaccaaagaatttgtgagggattttattttttccatcact-atttccctctctaatttt 6776009  T
Q  218 gctttt 223  Q
    ||||||    
T  6776010 gctttt 6776015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 203
Target Start/End: Complemental strand, 9882162 - 9882070
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaattt 203  Q
    ||||||| | ||||||| |||| |||||||||||||||||||||||||||||   ||| ||||||| ||  |||| | ||||||||||||||||||    
T  9882162 ttagtgaggaaaaacattaaattcctctctaattccgtcactaaattttgcg---aagaaatttgtgagggattttattttttccgtcactaattt 9882070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 25687405 - 25687355
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgc 159  Q
    |||| |||||||||||| | |||||||||||||||| ||||||||||||||    
T  25687405 ttagagaaggaaaacattacatccctctctaattccttcactaaattttgc 25687355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 14486749 - 14486684
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaattt 183  Q
    ||||||| | ||||| |||||||||||||||||| |||||||||| ||| | |||||||||| ||||    
T  14486749 ggaaaacgtgaaatctctctctaattccgtcactgaattttgcgatcaaag-atttgtaagagattt 14486684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 25679967 - 25680011
Alignment:
Q  180 atttcatttttccgtcactaatttccctcactaattttgcttttt 224  Q
    ||||||||||||| |||||||||| | || |||||||||||||||    
T  25679967 atttcatttttccctcactaattttcgtctctaattttgcttttt 25680011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 109 - 157
Target Start/End: Original strand, 30673508 - 30673556
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaatttt 157  Q
    ||||||| ||||||||| |||||||||||||||||  | ||||||||||    
T  30673508 ttagtgagggaaaacatgaaatccctctctaattctattactaaatttt 30673556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 19617 - 19743
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  19617 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 19716  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
      |||||||||||||||||||||||||    
T  19717 tgctaattttgctttttctagtagtgt 19743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 26497 - 26623
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||| |||||||||||||||||||| |    
T  26497 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccgt 26596  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    |||||||||||||||||||||||||||    
T  26597 cactaattttgctttttctagtagtgt 26623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 95; Significance: 2e-46; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 3756 - 3882
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||| |||    
T  3756 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattttcct 3855  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||||||||||||||||||||    
T  3856 cgctaattttgctttttctagtagtgt 3882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 202788 - 202913
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  202788 ttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgagcaatttcattttttccgtcactaatttccct 202887  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | |||||||| |||||||||||||||    
T  202888 cgctaatttttctttttctagtagtg 202913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 233
Target Start/End: Complemental strand, 274733 - 274665
Alignment:
Q  166 ggaatttgtaagaaatttcattttt-ccgtcactaatttccctcactaattttgctttttctagtagtg 233  Q
    ||||||||| |  |||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||    
T  274733 ggaatttgtgaagaatttcattttttccgtcactaatttccctcgctaattttgttttttctagtagtg 274665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 118 - 161
Target Start/End: Complemental strand, 276250 - 276207
Alignment:
Q  118 gaaaacataaaatccctctctaattccgtcactaaattttgcga 161  Q
    |||||| | |||||||||||||||||||||||||||||||||||    
T  276250 gaaaacgtgaaatccctctctaattccgtcactaaattttgcga 276207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 91; Significance: 6e-44; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 8235 - 8109
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||| ||||||||||    
T  8235 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgttaggaatttcattttttccgtcattaatttccct 8136  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | ||||||||||||||||||| |||||    
T  8135 cgctaattttgctttttctagaagtgt 8109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 21967 - 21841
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||| ||||||||||    
T  21967 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgttaggaatttcattttttccgtcattaatttccct 21868  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | ||||||||||||||||||| |||||    
T  21867 cgctaattttgctttttctagaagtgt 21841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 127 - 233
Target Start/End: Original strand, 84335 - 84442
Alignment:
Q  127 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaattttgctttttc 225  Q
    |||||||||||||||||||||||||||||||| ||||| | ||||||| || ||||||| ||||||||||||||||||||||  ||||||||||||||||    
T  84335 aaatccctctctaattccgtcactaaattttgtgaccatgaaatttgtgaggaatttcattttttccgtcactaatttcccttgctaattttgctttttc 84434  T
Q  226 tagtagtg 233  Q
    ||||||||    
T  84435 tagtagtg 84442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 6104 - 5979
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||    
T  6104 ttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 6005  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||| ||||||||||||||    
T  6004 cgctaattttgttttttctagtagtg 5979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 22225 - 22350
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||| ||||| ||||||||||||||||    
T  22225 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcatttttttcgtcactaatttccct 22324  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  22325 cgctaattttgctttttctagtagtg 22350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 109 - 229
Target Start/End: Complemental strand, 84799 - 84678
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||| ||||| |||||||||||||||    
T  84799 ttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttctgtcactaatttccct 84700  T
Q  208 cactaattttgctttttctagt 229  Q
    ||||||||||||||||||||||    
T  84699 cactaattttgctttttctagt 84678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 117 - 233
Target Start/End: Complemental strand, 121104 - 120987
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaatt 215  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| | ||||| | | ||||||||||||| ||||||    
T  121104 ggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgagaaattttatttttttcataactaatttccctctctaatt 121005  T
Q  216 ttgctttttctagtagtg 233  Q
    || |||||| ||||||||    
T  121004 ttactttttttagtagtg 120987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 89; Significance: 9e-43; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 109 - 232
Target Start/End: Original strand, 7519 - 7643
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||    
T  7519 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcatattttccgtcactaatttccct 7618  T
Q  208 cactaattttgctttttctagtagt 232  Q
    | |||||||||||||||||||||||    
T  7619 cgctaattttgctttttctagtagt 7643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 89; Significance: 9e-43; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 125 - 232
Target Start/End: Original strand, 182560 - 182668
Alignment:
Q  125 taaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaattttgctttt 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||| |||||    
T  182560 taaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatttccctcgctaattttactttt 182659  T
Q  224 tctagtagt 232  Q
    |||||||||    
T  182660 tctagtagt 182668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 219650 - 219775
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||||||||||||| ||||||||||||||  ||  ||||||| || ||||||| |||||||||||||||||||| |    
T  219650 ttagtgagggaaaacatgaaatccctctctaattccgttactaaattttgcgattaaaaaatttgtgaggaatttcattttttccgtcactaatttccgt 219749  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||||||||||||    
T  219750 cgctaattttgctttttctagtagtg 219775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 215781 - 215663
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcattttt-ccgtcactaatttccct 207  Q
    ||||||| ||||||| ||||||||||||||||||||||        |||||||||||||||||||| || |||||||||||| ||||| |||||||| ||    
T  215781 ttagtgagggaaaacgtaaaatccctctctaattccgta-------tttgcgaccaaggaatttgtgaggaatttcattttttccgtcgctaatttctct 215689  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | ||||||||||||||| ||||||||    
T  215688 cgctaattttgctttttttagtagtg 215663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 109 - 236
Target Start/End: Complemental strand, 1044 - 915
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca--tttttccgtcactaatttccc 206  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | || ||||| |  ||||||||||| |||||||||    
T  1044 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttatgaggaattttatttttttccgtcagtaatttccc 945  T
Q  207 tcactaattttgctttttctagtagtgtta 236  Q
    || |||||||||||||||||||||||||||    
T  944 tcgctaattttgctttttctagtagtgtta 915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 15115 - 14989
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| | || |||||||| ||||| |||||||||||||||    
T  15115 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcattttttcggtcactaatttccct 15016  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||||||||||||||||||||    
T  15015 cgctaattttgctttttctagtagtgt 14989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 10788 - 10662
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||| || |||||||| |||||||||||||||||||||    
T  10788 ttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttccct 10689  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | ||||||||||||||||||| |||||    
T  10688 cgctaattttgctttttctagcagtgt 10662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 58596 - 58721
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| | || ||||| || ||||||||||| |||||||||    
T  58596 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttttgaggaattttatgttttccgtcacaaatttccct 58695  T
Q  208 cactaattttgctttttctagtagtg 233  Q
    | |||||||||||||| |||||||||    
T  58696 ccctaattttgcttttcctagtagtg 58721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 173458 - 173584
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgta--agaaatttca-tttttccgtcactaatttcc 205  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||  |||||||||| |||||||||||||||||| |    
T  173458 ttagtgagggaaaacataaaatcactctctaattccgtcactaaattttgcgaccaaagaatttttatgagaaatttcattttttccgtcactaattt-c 173556  T
Q  206 ctcactaattttgctttttctagtagtg 233  Q
    ||| |||||||||||||||||| |||||    
T  173557 ctcgctaattttgctttttctaatagtg 173584  T

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Target: scaffold0058 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 74666 - 74540
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| | || ||||| || ||||||||||| |||||||||    
T  74666 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaattttatgttttccgtcacaaatttccct 74567  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
    | |||||||| ||||| ||||||||||    
T  74566 ccctaattttacttttcctagtagtgt 74540  T

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Target: scaffold0108 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 12685 - 12793
Alignment:
Q  128 aatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcactaattttgctttttct 226  Q
    |||||||||||||||||||||||||||||||||||||  |||||| | || ||||||| ||||||||||||||||||||||| ||||||||||||||||     
T  12685 aatccctctctaattccgtcactaaattttgcgaccatagaatttatgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttca 12784  T
Q  227 agtagtgtt 235  Q
    |||||||||    
T  12785 agtagtgtt 12793  T

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Target: scaffold0062 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 109 - 236
Target Start/End: Original strand, 43931 - 44059
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| |||||| | ||||||||||||| | |||||||||||||||| |||||||| || ||||||| ||||||| ||||||||||||||    
T  43931 ttagtgagggaaaacgtaaaattcttctctaattccgttattaaattttgcgaccaaagaatttgtgaggaatttcattttttccatcactaatttccct 44030  T
Q  208 cactaattttgctttttctagtagtgtta 236  Q
    | |||||||| ||||||||||||||||||    
T  44031 cgctaatttttctttttctagtagtgtta 44059  T

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Target: scaffold0002 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 439977 - 440103
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||  ||||||||||||||||||||||||||||||||||||| |||| ||||||| || ||||||| |||||||||||||||| | |||    
T  439977 ttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtcactaatattcct 440076  T
Q  208 cactaattttgctttttctagtagtgt 234  Q
      |||||||| ||||||||||||||||    
T  440077 tgctaattttactttttctagtagtgt 440103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 119 - 235
Target Start/End: Complemental strand, 74832 - 74715
Alignment:
Q  119 aaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcactaatttt 217  Q
    ||||||| ||||||||||||||||| ||||||||||||| ||||||  |||||||| ||||||||||| |||||||||||||||||||||  ||||||||    
T  74832 aaaacatgaaatccctctctaattctgtcactaaattttacgaccagagaatttgtgagaaatttcattttttccgtcactaatttcccttgctaatttt 74733  T
Q  218 gctttttctagtagtgtt 235  Q
    || |||||||||| ||||    
T  74732 gccttttctagtattgtt 74715  T

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Target: scaffold0087 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 112 - 233
Target Start/End: Complemental strand, 37909 - 37787
Alignment:
Q  112 gtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccctcac 210  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||||   ||||||| || ||||| | |||||||||||||||||||||   |    
T  37909 gtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccataaaatttgtgaggaattttattttttccgtcactaatttcccctgc 37810  T
Q  211 taattttgctttttctagtagtg 233  Q
    |||||||| ||||||||||||||    
T  37809 taattttgttttttctagtagtg 37787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 117 - 234
Target Start/End: Complemental strand, 39820 - 39702
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcattttt-ccgtcactaatttccctcactaatt 215  Q
    ||||||| | ||||| ||||||||||||||||||||||||||| |||| | ||||||  || |||||||||||| || ||||||||||||||| ||||||    
T  39820 ggaaaacgtgaaatctctctctaattccgtcactaaattttgcaaccatgaaatttgggaggaatttcattttttccatcactaatttccctcgctaatt 39721  T
Q  216 ttgctttttctagtagtgt 234  Q
    |||||||||||||||||||    
T  39720 ttgctttttctagtagtgt 39702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 117 - 233
Target Start/End: Original strand, 10180 - 10297
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcactaatt 215  Q
    ||||||||| |||||||||||||||||||||||||||||||||||  || |||||||| || ||||| || ||||||||||| |||||||||| ||||||    
T  10180 ggaaaacatgaaatccctctctaattccgtcactaaattttgcgattaaagaatttgtgaggaattttatgttttccgtcacaaatttccctccctaatt 10279  T
Q  216 ttgctttttctagtagtg 233  Q
    |||||||| |||| ||||    
T  10280 ttgcttttcctagcagtg 10297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 6809 - 6931
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||||| |||| ||||||||||||||||| |||||||||| || ||| ||||||  |  ||||||| ||||||||||| ||||||||||    
T  6809 ttagtgagggaaaacatgaaattcctctctaattccgtcattaaattttgcaacgaagaaatttgcgaagaatttcattttttccgtcaataatttccct 6908  T
Q  208 cactaattttgctttttctagta 230  Q
    | |||||||||||||||||||||    
T  6909 cgctaattttgctttttctagta 6931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 146 - 233
Target Start/End: Complemental strand, 17705 - 17617
Alignment:
Q  146 tcactaaattttgcgaccaaggaatttgtaagaaatttcattttt-ccgtcactaatttccctcactaattttgctttttctagtagtg 233  Q
    |||||||| |||||||||||||||||||| || |||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||    
T  17705 tcactaaagtttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgttttttctagtagtg 17617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0655 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 117 - 234
Target Start/End: Complemental strand, 3279 - 3161
Alignment:
Q  117 ggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcactaatt 215  Q
    ||||||| | ||||||||| ||||||| |||||||||||||||||||| | ||||||| || || || || |||||||||||||||||||||| ||||||    
T  3279 ggaaaacgtgaaatccctcactaattctgtcactaaattttgcgaccatgaaatttgtgaggaactttatcttttccgtcactaatttccctccctaatt 3180  T
Q  216 ttgctttttctagtagtgt 234  Q
    || ||||||||| ||||||    
T  3179 tttctttttctattagtgt 3161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 7470 - 7592
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaatttccct 207  Q
    ||||||| ||||||| | ||||||||||||||||| ||||||||| |||||||| ||||| ||||| |  ||||||| |||||||||||||||||| |||    
T  7470 ttagtgagggaaaacgtgaaatccctctctaattctgtcactaaactttgcgactaaggattttgtgaagaatttcattttttccgtcactaattttcct 7569  T
Q  208 cactaattttgctttttctagta 230  Q
    |  ||||||| ||||||||||||    
T  7570 cgttaattttactttttctagta 7592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 119 - 223
Target Start/End: Original strand, 10916 - 11021
Alignment:
Q  119 aaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttcat-ttttccgtcactaatttccctcactaatttt 217  Q
    ||||||| |||| |||||||||||| |||||||||||||| ||||||||||||||| || ||||| || |||| |||||| ||||||| || ||||||||    
T  10916 aaaacatgaaattcctctctaattctgtcactaaattttgtgaccaaggaatttgtgaggaattttatatttttcgtcacaaatttccttccctaatttt 11015  T
Q  218 gctttt 223  Q
    ||||||    
T  11016 gctttt 11021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 9881 - 9952
Alignment:
Q  166 ggaatttgtaagaaatttcattttt-ccgtcactaatttccctcactaattttgctttttctagtagtgtta 236  Q
    ||||||||| ||||||||||||||| || ||||||||||| ||| |||||||||||||||||||||||||||    
T  9881 ggaatttgtgagaaatttcattttttccttcactaatttcactcgctaattttgctttttctagtagtgtta 9952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 203
Target Start/End: Complemental strand, 1644 - 1549
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaattt 203  Q
    ||||||| ||| ||||| ||| ||||||||||||  || ||||||||||||||||||||||||| | ||  |||| | ||||||||||||||||||    
T  1644 ttagtgagggataacatgaaacccctctctaattatgttactaaattttgcgaccaaggaatttatgagggattttattttttccgtcactaattt 1549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 203
Target Start/End: Complemental strand, 19263 - 19168
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtaagaaatttca-tttttccgtcactaattt 203  Q
    ||||||| ||| ||||| ||||||||||||||||  ||  |||||||||||||||||| || || | ||| |||| | ||||||||||| ||||||    
T  19263 ttagtgagggataacatgaaatccctctctaattatgtttctaaattttgcgaccaagaaaattatgagagattttattttttccgtcattaattt 19168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 172
Target Start/End: Original strand, 36316 - 36379
Alignment:
Q  109 ttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 172  Q
    ||||||| ||| ||||| ||||| ||||||||||  || ||||||||||| |||||||||||||    
T  36316 ttagtgagggataacatgaaatctctctctaattatgttactaaattttgtgaccaaggaattt 36379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 166
Target Start/End: Original strand, 112360 - 112399
Alignment:
Q  127 aaatccctctctaattccgtcactaaattttgcgaccaag 166  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  112360 aaatccctctctaattccgtcattaaattttgcaaccaag 112399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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