View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4307-Insertion-33 (Length: 171)

Name: NF4307-Insertion-33
Description: NF4307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4307-Insertion-33
NF4307-Insertion-33
[»] chr1 (83 HSPs)
chr1 (5-171)||(6262671-6262837)
chr1 (38-171)||(10199379-10199513)
chr1 (34-153)||(45205029-45205149)
chr1 (36-146)||(12477283-12477394)
chr1 (37-169)||(15581218-15581351)
chr1 (36-158)||(11211081-11211204)
chr1 (36-171)||(10439649-10439785)
chr1 (101-169)||(15579511-15579579)
chr1 (52-167)||(44422678-44422794)
chr1 (111-169)||(38867804-38867862)
chr1 (115-168)||(38170664-38170717)
chr1 (107-159)||(4699598-4699650)
chr1 (111-163)||(11639395-11639447)
chr1 (6-76)||(15488886-15488957)
chr1 (110-165)||(29929598-29929653)
chr1 (36-85)||(15565890-15565939)
chr1 (110-163)||(17420241-17420294)
chr1 (107-164)||(38266438-38266495)
chr1 (115-168)||(45327623-45327676)
chr1 (110-162)||(17628637-17628689)
chr1 (111-171)||(25479620-25479680)
chr1 (107-171)||(30257718-30257782)
chr1 (121-169)||(48282173-48282221)
chr1 (37-77)||(48830142-48830182)
chr1 (130-169)||(4033990-4034029)
chr1 (111-169)||(11941301-11941360)
chr1 (110-169)||(12564472-12564531)
chr1 (110-161)||(24968397-24968448)
chr1 (110-161)||(25432249-25432300)
chr1 (111-146)||(27140517-27140552)
chr1 (111-146)||(27963366-27963401)
chr1 (111-146)||(28689448-28689483)
chr1 (107-150)||(34278685-34278728)
chr1 (111-162)||(43722308-43722359)
chr1 (6-77)||(45107555-45107626)
chr1 (111-169)||(47498811-47498870)
chr1 (99-169)||(6976952-6977021)
chr1 (111-169)||(11584528-11584586)
chr1 (36-78)||(15360857-15360899)
chr1 (111-145)||(16981933-16981967)
chr1 (111-169)||(26461914-26461972)
chr1 (116-166)||(27145586-27145636)
chr1 (110-148)||(30371186-30371224)
chr1 (107-169)||(32515414-32515476)
chr1 (115-169)||(38001639-38001693)
chr1 (121-159)||(42336664-42336702)
chr1 (112-169)||(4549888-4549945)
chr1 (112-169)||(17269290-17269347)
chr1 (125-158)||(29045896-29045929)
chr1 (126-171)||(30418153-30418198)
chr1 (110-159)||(31118081-31118130)
chr1 (37-78)||(40833900-40833941)
chr1 (36-77)||(44936656-44936697)
chr1 (110-171)||(47261547-47261608)
chr1 (116-169)||(49692025-49692078)
chr1 (111-147)||(3224462-3224498)
chr1 (36-72)||(5082804-5082840)
chr1 (111-171)||(6659719-6659779)
chr1 (128-164)||(17631080-17631116)
chr1 (121-169)||(19389951-19389999)
chr1 (110-170)||(24502800-24502860)
chr1 (43-146)||(27887114-27887218)
chr1 (135-171)||(28467496-28467532)
chr1 (37-77)||(32958616-32958656)
chr1 (111-171)||(34290275-34290335)
chr1 (99-159)||(35925717-35925777)
chr1 (111-159)||(38578567-38578615)
chr1 (109-153)||(47917273-47917317)
chr1 (111-146)||(2773607-2773642)
chr1 (110-153)||(3597270-3597313)
chr1 (110-145)||(4549268-4549303)
chr1 (111-146)||(4622132-4622167)
chr1 (110-169)||(4768802-4768861)
chr1 (111-146)||(5886990-5887025)
chr1 (60-146)||(9507231-9507318)
chr1 (113-148)||(15064829-15064864)
chr1 (38-85)||(15361678-15361725)
chr1 (111-158)||(24460391-24460438)
chr1 (116-163)||(27145965-27146012)
chr1 (110-145)||(28935873-28935908)
chr1 (111-158)||(29635386-29635433)
chr1 (111-166)||(39270401-39270456)
chr1 (36-75)||(41516148-41516187)
[»] chr8 (60 HSPs)
chr8 (41-171)||(28769310-28769441)
chr8 (107-165)||(14949901-14949959)
chr8 (99-168)||(25869240-25869309)
chr8 (20-159)||(4558744-4558885)
chr8 (110-169)||(6950360-6950419)
chr8 (107-169)||(9572905-9572967)
chr8 (6-156)||(11188141-11188293)
chr8 (110-169)||(4055589-4055648)
chr8 (7-152)||(12361125-12361272)
chr8 (110-169)||(30191114-30191173)
chr8 (35-152)||(31705046-31705165)
chr8 (111-169)||(32840958-32841017)
chr8 (20-85)||(1470914-1470980)
chr8 (111-165)||(8066747-8066801)
chr8 (111-169)||(9540969-9541027)
chr8 (111-169)||(30389138-30389196)
chr8 (111-164)||(11569435-11569488)
chr8 (111-159)||(3161606-3161654)
chr8 (97-153)||(30277234-30277290)
chr8 (114-150)||(38421306-38421342)
chr8 (122-169)||(7918419-7918466)
chr8 (110-169)||(30918151-30918209)
chr8 (111-169)||(33808342-33808401)
chr8 (36-161)||(2699269-2699395)
chr8 (121-159)||(10358627-10358665)
chr8 (110-148)||(13000418-13000456)
chr8 (34-72)||(31315524-31315562)
chr8 (31-85)||(45071160-45071214)
chr8 (112-153)||(2594986-2595027)
chr8 (110-171)||(8255430-8255491)
chr8 (36-148)||(12224893-12225006)
chr8 (110-171)||(26479823-26479884)
chr8 (110-159)||(27119912-27119961)
chr8 (34-169)||(28784766-28784904)
chr8 (42-161)||(29973050-29973171)
chr8 (110-171)||(30259152-30259213)
chr8 (128-169)||(30987964-30988005)
chr8 (107-140)||(42015552-42015585)
chr8 (128-169)||(43709318-43709359)
chr8 (128-165)||(45071430-45071467)
chr8 (111-159)||(779044-779092)
chr8 (107-159)||(3254260-3254312)
chr8 (20-71)||(6875332-6875386)
chr8 (121-169)||(8629505-8629553)
chr8 (111-171)||(9700040-9700100)
chr8 (49-85)||(10075609-10075645)
chr8 (111-171)||(11376742-11376802)
chr8 (20-146)||(11795038-11795166)
chr8 (111-163)||(24258105-24258157)
chr8 (128-164)||(29168643-29168679)
chr8 (34-169)||(39551182-39551318)
chr8 (129-169)||(40071806-40071846)
chr8 (107-169)||(2093314-2093377)
chr8 (38-85)||(2482830-2482877)
chr8 (36-71)||(2605982-2606017)
chr8 (38-85)||(6509361-6509408)
chr8 (36-79)||(26820162-26820205)
chr8 (110-169)||(29169909-29169968)
chr8 (41-80)||(31142575-31142614)
chr8 (111-158)||(41620275-41620322)
[»] chr6 (70 HSPs)
chr6 (36-169)||(281821-281955)
chr6 (111-163)||(9027617-9027669)
chr6 (107-169)||(30863281-30863343)
chr6 (36-164)||(2027384-2027513)
chr6 (110-171)||(20377891-20377952)
chr6 (111-171)||(10616512-10616572)
chr6 (110-168)||(1669772-1669830)
chr6 (5-78)||(2514633-2514707)
chr6 (110-163)||(7931705-7931758)
chr6 (107-163)||(733156-733212)
chr6 (110-169)||(32577959-32578018)
chr6 (110-169)||(33498657-33498716)
chr6 (110-169)||(34939551-34939610)
chr6 (40-169)||(4006681-4006811)
chr6 (111-169)||(34404698-34404756)
chr6 (99-165)||(34939771-34939837)
chr6 (128-169)||(27857414-27857455)
chr6 (128-169)||(31338032-31338073)
chr6 (128-169)||(32917253-32917294)
chr6 (111-164)||(33832251-33832304)
chr6 (110-170)||(5566149-5566209)
chr6 (121-169)||(5731618-5731666)
chr6 (21-80)||(10154168-10154228)
chr6 (19-77)||(1402941-1403000)
chr6 (110-169)||(2460124-2460183)
chr6 (110-161)||(3217171-3217222)
chr6 (108-171)||(4080952-4081015)
chr6 (128-171)||(6310221-6310264)
chr6 (110-169)||(7945857-7945916)
chr6 (34-164)||(8420175-8420306)
chr6 (128-171)||(20368151-20368194)
chr6 (109-164)||(22743518-22743573)
chr6 (81-144)||(27909636-27909699)
chr6 (110-153)||(28467861-28467904)
chr6 (132-171)||(34404600-34404639)
chr6 (110-153)||(34735829-34735872)
chr6 (109-163)||(738659-738713)
chr6 (111-169)||(821838-821896)
chr6 (36-74)||(4420608-4420646)
chr6 (110-148)||(6536985-6537023)
chr6 (111-169)||(28641722-28641780)
chr6 (13-78)||(31420897-31420963)
chr6 (98-171)||(781407-781480)
chr6 (100-165)||(1015430-1015494)
chr6 (36-77)||(7785808-7785849)
chr6 (128-165)||(9041437-9041474)
chr6 (110-159)||(30523975-30524024)
chr6 (121-162)||(30865802-30865843)
chr6 (107-168)||(31958558-31958619)
chr6 (121-162)||(33500460-33500501)
chr6 (111-159)||(1575934-1575982)
chr6 (110-146)||(2167154-2167190)
chr6 (110-146)||(2178787-2178823)
chr6 (20-162)||(4246356-4246500)
chr6 (110-146)||(7785740-7785776)
chr6 (111-171)||(8035119-8035179)
chr6 (121-169)||(8348275-8348323)
chr6 (34-78)||(27595632-27595676)
chr6 (65-165)||(30523652-30523752)
chr6 (111-163)||(31420984-31421036)
chr6 (110-158)||(33887868-33887916)
chr6 (133-164)||(725633-725664)
chr6 (107-146)||(821460-821499)
chr6 (105-164)||(1810283-1810342)
chr6 (41-76)||(1904783-1904818)
chr6 (41-76)||(1909016-1909051)
chr6 (20-78)||(10452425-10452484)
chr6 (66-169)||(10616686-10616789)
chr6 (121-164)||(30865532-30865575)
chr6 (110-169)||(32171356-32171415)
[»] chr3 (57 HSPs)
chr3 (25-169)||(21574443-21574587)
chr3 (8-171)||(40122724-40122888)
chr3 (110-169)||(37273172-37273231)
chr3 (97-171)||(36646353-36646427)
chr3 (34-157)||(1816544-1816668)
chr3 (100-163)||(27290880-27290943)
chr3 (111-169)||(40880921-40880979)
chr3 (61-169)||(43115044-43115153)
chr3 (107-171)||(1810012-1810076)
chr3 (111-163)||(3015822-3015874)
chr3 (100-148)||(36200124-36200172)
chr3 (111-159)||(41724251-41724299)
chr3 (122-169)||(14598526-14598573)
chr3 (13-145)||(38462220-38462354)
chr3 (111-169)||(51130789-51130847)
chr3 (110-171)||(2081054-2081115)
chr3 (112-169)||(24624250-24624307)
chr3 (97-146)||(30923894-30923943)
chr3 (110-158)||(1823896-1823944)
chr3 (121-169)||(24281096-24281144)
chr3 (113-169)||(42817195-42817251)
chr3 (110-162)||(48048962-48049014)
chr3 (111-146)||(12923321-12923356)
chr3 (38-164)||(23785220-23785347)
chr3 (20-78)||(43116493-43116552)
chr3 (111-146)||(54180776-54180811)
chr3 (121-171)||(1217771-1217821)
chr3 (113-163)||(11039318-11039368)
chr3 (110-160)||(22214641-22214691)
chr3 (36-78)||(31337466-31337508)
chr3 (121-163)||(37155050-37155092)
chr3 (121-163)||(37200405-37200447)
chr3 (36-85)||(23952164-23952213)
chr3 (128-169)||(25182960-25183001)
chr3 (96-161)||(31010426-31010491)
chr3 (97-146)||(31403172-31403221)
chr3 (36-77)||(34760904-34760945)
chr3 (98-171)||(53848034-53848107)
chr3 (20-75)||(1395617-1395673)
chr3 (37-85)||(2201092-2201140)
chr3 (97-169)||(31403043-31403115)
chr3 (121-169)||(34707469-34707517)
chr3 (50-78)||(35246656-35246684)
chr3 (110-146)||(37825160-37825196)
chr3 (111-171)||(39602181-39602241)
chr3 (110-158)||(42745076-42745124)
chr3 (111-159)||(47249469-47249517)
chr3 (34-78)||(48397607-48397651)
chr3 (20-75)||(49586984-49587040)
chr3 (36-67)||(659899-659930)
chr3 (20-82)||(8007756-8007819)
chr3 (121-164)||(23314497-23314540)
chr3 (111-146)||(24785244-24785279)
chr3 (39-78)||(28779322-28779361)
chr3 (121-156)||(30750049-30750084)
chr3 (110-165)||(39971335-39971390)
chr3 (110-145)||(45432936-45432971)
[»] chr5 (67 HSPs)
chr5 (36-169)||(28586739-28586873)
chr5 (36-169)||(16889698-16889832)
chr5 (36-164)||(14295469-14295598)
chr5 (121-168)||(29363057-29363104)
chr5 (34-171)||(10272402-10272540)
chr5 (36-169)||(32172616-32172750)
chr5 (110-171)||(6109521-6109582)
chr5 (126-171)||(10152388-10152433)
chr5 (44-164)||(18704015-18704135)
chr5 (111-168)||(30269707-30269764)
chr5 (34-169)||(37526172-37526308)
chr5 (110-165)||(35963279-35963334)
chr5 (110-161)||(37794679-37794730)
chr5 (110-169)||(38728440-38728499)
chr5 (99-169)||(499704-499774)
chr5 (121-171)||(2092516-2092566)
chr5 (111-169)||(17258856-17258914)
chr5 (36-78)||(35135727-35135769)
chr5 (109-171)||(35960450-35960512)
chr5 (121-162)||(5531083-5531124)
chr5 (111-164)||(13604827-13604880)
chr5 (34-83)||(24084859-24084908)
chr5 (19-75)||(32969185-32969242)
chr5 (112-169)||(37063050-37063107)
chr5 (128-169)||(38047852-38047893)
chr5 (115-163)||(18700427-18700475)
chr5 (41-85)||(33234329-33234373)
chr5 (111-171)||(41957422-41957482)
chr5 (110-165)||(985651-985706)
chr5 (113-160)||(2569677-2569724)
chr5 (110-169)||(4619745-4619804)
chr5 (111-169)||(7808544-7808603)
chr5 (110-169)||(10907416-10907475)
chr5 (128-171)||(11296970-11297013)
chr5 (122-169)||(14980559-14980606)
chr5 (120-171)||(23160717-23160768)
chr5 (38-85)||(32059647-32059694)
chr5 (110-169)||(37611188-37611247)
chr5 (110-169)||(37787918-37787977)
chr5 (111-165)||(1019443-1019497)
chr5 (111-165)||(11700355-11700409)
chr5 (111-169)||(12459974-12460032)
chr5 (99-161)||(29590610-29590672)
chr5 (121-171)||(34205290-34205340)
chr5 (122-163)||(11457148-11457189)
chr5 (114-171)||(12242681-12242738)
chr5 (110-163)||(13194839-13194892)
chr5 (111-148)||(32194073-32194110)
chr5 (34-169)||(37690609-37690746)
chr5 (36-77)||(39750106-39750147)
chr5 (128-165)||(40499703-40499740)
chr5 (38-78)||(583838-583878)
chr5 (110-146)||(1899192-1899228)
chr5 (111-171)||(8089975-8090035)
chr5 (110-146)||(18543193-18543229)
chr5 (34-78)||(34205200-34205244)
chr5 (121-169)||(38766518-38766566)
chr5 (129-164)||(11406251-11406286)
chr5 (111-170)||(11707094-11707153)
chr5 (110-169)||(16457586-16457645)
chr5 (107-146)||(17369435-17369474)
chr5 (138-169)||(19113092-19113123)
chr5 (110-165)||(30217120-30217174)
chr5 (36-71)||(37063146-37063181)
chr5 (110-165)||(38338362-38338416)
chr5 (18-80)||(39941785-39941848)
chr5 (128-171)||(42646947-42646990)
[»] chr2 (64 HSPs)
chr2 (43-148)||(33525961-33526067)
chr2 (110-164)||(43065428-43065482)
chr2 (38-144)||(7103480-7103588)
chr2 (36-171)||(1742003-1742139)
chr2 (110-161)||(10285898-10285949)
chr2 (111-169)||(15120222-15120280)
chr2 (111-169)||(44606083-44606141)
chr2 (36-85)||(10143135-10143184)
chr2 (107-171)||(29430793-29430857)
chr2 (39-146)||(44458334-44458442)
chr2 (111-162)||(30538153-30538204)
chr2 (97-164)||(35557103-35557170)
chr2 (111-169)||(1494419-1494477)
chr2 (6-159)||(6993707-6993861)
chr2 (121-163)||(9878661-9878703)
chr2 (111-169)||(11063527-11063585)
chr2 (36-169)||(28933787-28933920)
chr2 (36-148)||(1939326-1939439)
chr2 (127-168)||(9556294-9556335)
chr2 (36-85)||(13866852-13866901)
chr2 (37-78)||(31740024-31740065)
chr2 (36-148)||(33942113-33942226)
chr2 (110-163)||(41809224-41809277)
chr2 (113-169)||(787373-787429)
chr2 (107-171)||(14316116-14316180)
chr2 (49-169)||(42131594-42131714)
chr2 (135-171)||(43808621-43808657)
chr2 (41-80)||(1160807-1160846)
chr2 (110-169)||(1830083-1830142)
chr2 (20-74)||(17952770-17952825)
chr2 (97-152)||(25796190-25796245)
chr2 (110-169)||(28677632-28677691)
chr2 (101-164)||(35538669-35538732)
chr2 (113-171)||(3673850-3673907)
chr2 (107-169)||(14299604-14299666)
chr2 (111-169)||(18525210-18525268)
chr2 (111-169)||(32364704-32364762)
chr2 (107-169)||(32821844-32821906)
chr2 (111-169)||(33256779-33256837)
chr2 (111-165)||(35378993-35379047)
chr2 (35-77)||(36863691-36863733)
chr2 (36-78)||(39929830-39929872)
chr2 (111-169)||(43635074-43635132)
chr2 (36-85)||(3102656-3102705)
chr2 (128-169)||(4550803-4550844)
chr2 (110-155)||(14451037-14451082)
chr2 (36-77)||(32757534-32757575)
chr2 (36-85)||(35539686-35539735)
chr2 (110-163)||(43456686-43456739)
chr2 (116-165)||(44269010-44269059)
chr2 (110-158)||(1160655-1160703)
chr2 (114-170)||(9530701-9530756)
chr2 (121-161)||(12215856-12215896)
chr2 (122-162)||(29936043-29936083)
chr2 (110-146)||(41144248-41144284)
chr2 (112-148)||(43910993-43911029)
chr2 (96-159)||(1647260-1647323)
chr2 (111-169)||(5759548-5759606)
chr2 (111-169)||(16451157-16451216)
chr2 (99-146)||(27237889-27237936)
chr2 (20-70)||(32694158-32694209)
chr2 (110-161)||(34652017-34652068)
chr2 (36-75)||(37292415-37292454)
chr2 (110-169)||(39621989-39622048)
[»] chr7 (68 HSPs)
chr7 (111-164)||(46082075-46082128)
chr7 (111-163)||(21247965-21248017)
chr7 (110-169)||(33894665-33894724)
chr7 (110-171)||(3500938-3500999)
chr7 (20-161)||(27626104-27626248)
chr7 (110-163)||(29287265-29287318)
chr7 (109-158)||(39568308-39568357)
chr7 (128-168)||(28340394-28340434)
chr7 (111-159)||(44808197-44808245)
chr7 (110-165)||(28844528-28844583)
chr7 (110-169)||(48157093-48157152)
chr7 (110-164)||(33645939-33645993)
chr7 (99-165)||(44615081-44615147)
chr7 (110-163)||(6263343-6263395)
chr7 (36-161)||(12234870-12234994)
chr7 (36-85)||(31002724-31002773)
chr7 (6-78)||(49060472-49060545)
chr7 (98-169)||(753180-753252)
chr7 (34-78)||(31338469-31338513)
chr7 (38-85)||(3468579-3468626)
chr7 (110-169)||(36598329-36598388)
chr7 (110-165)||(45078316-45078371)
chr7 (10-84)||(2048100-2048174)
chr7 (98-164)||(4001735-4001801)
chr7 (36-86)||(27493941-27493991)
chr7 (36-86)||(27500599-27500649)
chr7 (36-86)||(27515391-27515441)
chr7 (100-166)||(27517833-27517898)
chr7 (137-171)||(31149705-31149739)
chr7 (137-171)||(31167997-31168031)
chr7 (111-168)||(34035956-34036014)
chr7 (115-169)||(36537951-36538005)
chr7 (39-85)||(47004053-47004099)
chr7 (111-153)||(47134746-47134788)
chr7 (98-159)||(941566-941627)
chr7 (36-73)||(18749880-18749917)
chr7 (110-155)||(20888381-20888426)
chr7 (111-164)||(30496744-30496797)
chr7 (116-169)||(32329113-32329166)
chr7 (110-163)||(39360061-39360114)
chr7 (111-148)||(39539775-39539812)
chr7 (110-163)||(39551527-39551580)
chr7 (112-164)||(6857317-6857369)
chr7 (110-158)||(9423578-9423626)
chr7 (111-159)||(15740394-15740442)
chr7 (110-142)||(24363601-24363633)
chr7 (111-159)||(25670569-25670617)
chr7 (36-80)||(40689049-40689093)
chr7 (110-171)||(44151447-44151512)
chr7 (129-169)||(44989902-44989942)
chr7 (110-165)||(4966194-4966249)
chr7 (121-148)||(8341877-8341904)
chr7 (122-157)||(9872922-9872957)
chr7 (112-159)||(11048067-11048114)
chr7 (113-164)||(19719047-19719098)
chr7 (110-165)||(20553141-20553196)
chr7 (110-169)||(22387869-22387928)
chr7 (110-153)||(25797013-25797056)
chr7 (100-143)||(27496406-27496449)
chr7 (100-143)||(27503064-27503107)
chr7 (4-133)||(28165021-28165152)
chr7 (106-145)||(33871283-33871322)
chr7 (110-169)||(34754783-34754842)
chr7 (107-146)||(35267397-35267436)
chr7 (110-169)||(39334231-39334290)
chr7 (110-145)||(39345509-39345544)
chr7 (112-163)||(39566186-39566237)
chr7 (36-71)||(46531496-46531531)
[»] scaffold0024 (1 HSPs)
scaffold0024 (110-169)||(27614-27673)
[»] chr4 (58 HSPs)
chr4 (110-169)||(6428056-6428115)
chr4 (38-143)||(7694009-7694115)
chr4 (50-160)||(10173500-10173609)
chr4 (36-145)||(54325034-54325144)
chr4 (108-169)||(4684078-4684139)
chr4 (110-171)||(21952986-21953047)
chr4 (125-161)||(14986958-14986994)
chr4 (34-86)||(30581734-30581786)
chr4 (34-133)||(31038876-31038976)
chr4 (111-171)||(33534140-33534200)
chr4 (110-165)||(3176081-3176136)
chr4 (111-169)||(2996612-2996670)
chr4 (107-169)||(23819124-23819186)
chr4 (115-169)||(25583635-25583689)
chr4 (36-78)||(27623598-27623640)
chr4 (111-169)||(46415765-46415823)
chr4 (126-163)||(8147922-8147959)
chr4 (61-146)||(19304915-19305000)
chr4 (97-146)||(29467620-29467669)
chr4 (110-162)||(1965979-1966031)
chr4 (113-169)||(2841667-2841723)
chr4 (129-169)||(27725271-27725311)
chr4 (110-150)||(55547036-55547076)
chr4 (110-165)||(1137750-1137805)
chr4 (36-146)||(24929456-24929567)
chr4 (110-169)||(27123325-27123384)
chr4 (111-158)||(32071907-32071954)
chr4 (107-150)||(46201383-46201426)
chr4 (110-169)||(50800003-50800062)
chr4 (36-78)||(4071845-4071887)
chr4 (111-169)||(6978935-6978993)
chr4 (6-85)||(40709439-40709518)
chr4 (111-169)||(42461290-42461348)
chr4 (27-85)||(44319903-44319961)
chr4 (36-78)||(46013365-46013407)
chr4 (111-169)||(53155299-53155357)
chr4 (128-169)||(19429485-19429526)
chr4 (111-164)||(27721756-27721809)
chr4 (110-159)||(30631994-30632043)
chr4 (100-169)||(37575909-37575978)
chr4 (36-77)||(43372035-43372076)
chr4 (39-159)||(46110169-46110290)
chr4 (111-159)||(4691887-4691935)
chr4 (129-169)||(6987714-6987754)
chr4 (128-164)||(21683507-21683543)
chr4 (43-79)||(21953243-21953279)
chr4 (36-76)||(23676680-23676720)
chr4 (121-165)||(27970107-27970151)
chr4 (36-72)||(32724082-32724118)
chr4 (20-76)||(39931371-39931427)
chr4 (40-164)||(42321858-42321982)
chr4 (111-171)||(53315365-53315425)
chr4 (128-171)||(7730656-7730699)
chr4 (110-145)||(8469374-8469409)
chr4 (36-75)||(20936070-20936109)
chr4 (125-168)||(21953321-21953364)
chr4 (109-152)||(22684511-22684554)
chr4 (110-169)||(52754637-52754696)
[»] scaffold0311 (1 HSPs)
scaffold0311 (110-161)||(10598-10649)
[»] scaffold0147 (1 HSPs)
scaffold0147 (114-164)||(12682-12732)
[»] scaffold0072 (1 HSPs)
scaffold0072 (107-159)||(4994-5046)
[»] scaffold0012 (1 HSPs)
scaffold0012 (122-158)||(38642-38678)
[»] scaffold0153 (2 HSPs)
scaffold0153 (41-80)||(6561-6600)
scaffold0153 (41-80)||(13581-13620)
[»] scaffold0044 (1 HSPs)
scaffold0044 (121-159)||(51935-51973)
[»] scaffold0590 (1 HSPs)
scaffold0590 (6-77)||(1140-1212)
[»] scaffold0275 (1 HSPs)
scaffold0275 (6-77)||(2763-2835)
[»] scaffold0254 (1 HSPs)
scaffold0254 (110-146)||(3511-3547)
[»] scaffold0005 (1 HSPs)
scaffold0005 (122-161)||(295871-295910)


Alignment Details
Target: chr1 (Bit Score: 163; Significance: 2e-87; HSPs: 83)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 163; E-Value: 2e-87
Query Start/End: Original strand, 5 - 171
Target Start/End: Original strand, 6262671 - 6262837
Alignment:
Q  5 gtaagtacttatttttaagctgtttctatataaaagataaaatcaagtcaaactatttttatataagctataagcttttttatcagctgtaatagagagt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6262671 gtaagtacttatttttaagctgtttctatataaaagataaaatcaagtcaaactatttttatataagctataagcttttttatcagctgtaatagagagt 6262770  T
Q  105 tcatagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6262771 tcatagaaataagcttaaaacaacttatggacatatcataagttattttcataagctctcccaaata 6262837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 7e-23
Query Start/End: Original strand, 38 - 171
Target Start/End: Complemental strand, 10199513 - 10199379
Alignment:
Q  38 aagataaaatcaagtcaaactatttttatataagctataagctttttt-atcagctgtaatagagagttcatagaaataagcttaaaacaacttatggac 136  Q
    |||||||||| |||||||||||||||  ||||| | |||||||||||| || |||| |  ||||||| | ||  ||||||||| ||||||||||||| ||    
T  10199513 aagataaaataaagtcaaactattttcgtataatcgataagcttttttcataagctattttagagagcttatgaaaataagctgaaaacaacttatgaac 10199414  T
Q  137 atgtcataagttattttcataagctctcccaaata 171  Q
    |||||||||| ||||||||| || |||||||||||    
T  10199413 atgtcataagctattttcatgagttctcccaaata 10199379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 34 - 153
Target Start/End: Original strand, 45205029 - 45205149
Alignment:
Q  34 ataaaagataaaatcaagtcaaactatttttatataagctataagctttttt-atcagctgtaatagagagttcatagaaataagcttaaaacaacttat 132  Q
    |||||||||||||| ||||||||||||||  |||||||||| ||| | |||| || |||| | ||  ||||||||| |||||||||| |||||||||||     
T  45205029 ataaaagataaaataaagtcaaactatttccatataagctagaagttgttttcataagctatcatgtagagttcatggaaataagctgaaaacaacttag 45205128  T
Q  133 ggacatgtcataagttatttt 153  Q
    |||||| ||||||||| ||||    
T  45205129 ggacatatcataagttgtttt 45205149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 36 - 146
Target Start/End: Complemental strand, 12477394 - 12477283
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataagctttttta-tcagctgtaatagagagttcatagaaataagcttaaaacaacttatgg 134  Q
    |||||||||||| |||||||||| |||| || |||| |||| ||||||||| | |||| | || ||||||  || |||||||||| ||||||||||||||    
T  12477394 aaaagataaaataaagtcaaactgttttcatgtaagatatatgcttttttaataagctatcatggagagtgtatggaaataagctgaaaacaacttatgg 12477295  T
Q  135 acatgtcataag 146  Q
    ||||||||||||    
T  12477294 acatgtcataag 12477283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 15581218 - 15581351
Alignment:
Q  37 aaagataaaatcaagtcaaactatttttatataagctataagctttttt-atcagctgtaatagagagttcatagaaataagcttaaaacaacttatgga 135  Q
    ||||||||||| |||| ||  |||||||||||||||||||||||||||| || || | |  ||||| | | ||||||||| ||| |||||| ||||| ||    
T  15581218 aaagataaaataaagttaatatatttttatataagctataagctttttttataaggtatgctagagggcttatagaaataggctgaaaacagcttataga 15581317  T
Q  136 catgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||||||| ||| ||| |||||| |||||    
T  15581318 catgtcataagttgtttccattagctcttccaaa 15581351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 36 - 158
Target Start/End: Original strand, 11211081 - 11211204
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataagctttttt-atcagctgtaatagagagttcatagaaataagcttaaaacaacttatgg 134  Q
    |||||||||||| |||| ||| | |||| ||||||| || || || |||| || |||||| || ||||||| || |||||||| | ||||||||||||||    
T  11211081 aaaagataaaataaagttaaatttttttcatataagataaaaactattttcataagctgttatggagagtttatggaaataagttaaaaacaacttatgg 11211180  T
Q  135 acatgtcataagttattttcataa 158  Q
    |||||  |||||||||||||||||    
T  11211181 acatgctataagttattttcataa 11211204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 10439649 - 10439785
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataagctttttt-atcagctgtaatagagagttcatagaaataagcttaaaacaacttatgg 134  Q
    |||||||||||| |||||||| |||||| ||||||||||| |||| | || |  | || |  | ||||||| || |||||||||| ||| ||  ||||||    
T  10439649 aaaagataaaatgaagtcaaattattttcatataagctatcagctatattcaaaaactatcctggagagtttatggaaataagctgaaagcagattatgg 10439748  T
Q  135 acatgtcataagttattttcataagctctcccaaata 171  Q
    ||||||||||  || ||||||||||||||||||||||    
T  10439749 acatgtcatagtttgttttcataagctctcccaaata 10439785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 15579511 - 15579579
Alignment:
Q  101 gagttcatagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||| || |||||||||| | |||||||||||||||||||||||||| ||| || |||||||||||||    
T  15579511 gagtttatggaaataagctgagaacaacttatggacatgtcataagttgtttccacaagctctcccaaa 15579579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 167
Target Start/End: Original strand, 44422678 - 44422794
Alignment:
Q  52 tcaaactatttttatataagctataagct-tttttatcagctgtaatagagagttcatagaaataagcttaaaacaacttatggacatgtcataagttat 150  Q
    ||||||| |||| |||||||||||||||| ||||||| |||| |  | ||||| | ||  |||||||||  |  || ||||||||||||||||||| |||    
T  44422678 tcaaactgttttcatataagctataagctatttttataagctatcctggagagcttatgaaaataagctgtagtcagcttatggacatgtcataagctat 44422777  T
Q  151 tttcataagctctccca 167  Q
    |||||||||||||||||    
T  44422778 tttcataagctctccca 44422794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 38867862 - 38867804
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||| ||||||||| |||||||| ||||||||||||| ||||||||||| ||||    
T  38867862 aaataagctaaaaacaactgatggacatatcataagttatttccataagctctctcaaa 38867804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 38170717 - 38170664
Alignment:
Q  115 aagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaa 168  Q
    ||||| ||||||||||||| |||||||||||| | |||||||||||||||||||    
T  38170717 aagctgaaaacaacttatgaacatgtcataagctgttttcataagctctcccaa 38170664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 4699650 - 4699598
Alignment:
Q  107 atagaaataagcttaaaacaacttatggacatgtcataagttattttcataag 159  Q
    ||||||||||||| |||||| |||||| |||||||||||||| ||||||||||    
T  4699650 atagaaataagctaaaaacagcttatgaacatgtcataagttgttttcataag 4699598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 11639447 - 11639395
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctct 163  Q
    ||||||||| |||||| ||||||||||||||||||| | ||||||||||||||    
T  11639447 aaataagctaaaaacagcttatggacatgtcataagctgttttcataagctct 11639395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 15488886 - 15488957
Alignment:
Q  6 taagtacttatttttaagctgtttctat-ataaaagataaaatcaagtcaaactatttttatataagctata 76  Q
    |||| |||||| | |||| ||||||||| ||||||||||| || ||||||||||||||||||||||| ||||    
T  15488886 taaggacttatgtataagttgtttctatgataaaagataacataaagtcaaactatttttatataagatata 15488957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 29929653 - 29929598
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcc 165  Q
    |||||| ||| ||||||||||||| ||||||||| |||| ||||||||||||||||    
T  29929653 gaaatatgctgaaaacaacttatgcacatgtcatgagttgttttcataagctctcc 29929598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 15565939 - 15565890
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataagctttttt 85  Q
    |||||||||||| |||||||||||||||| ||||| ||||||||| ||||    
T  15565939 aaaagataaaataaagtcaaactatttttgtataaactataagctgtttt 15565890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 17420241 - 17420294
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctct 163  Q
    |||||||| | ||||||| |||||||||||| ||||||| ||||||||||||||    
T  17420241 gaaataagttgaaaacaatttatggacatgtaataagttgttttcataagctct 17420294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 164
Target Start/End: Complemental strand, 38266495 - 38266438
Alignment:
Q  107 atagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctc 164  Q
    ||||||||||| | ||||||| ||||| ||||||| |||||||||||||||| |||||    
T  38266495 atagaaataagttgaaaacaaattatgaacatgtcgtaagttattttcataaactctc 38266438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 45327623 - 45327676
Alignment:
Q  115 aagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaa 168  Q
    ||||| ||||||| |||||||||||||||||||| ||| ||||||||| |||||    
T  45327623 aagctgaaaacaatttatggacatgtcataagttgtttccataagctcccccaa 45327676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 17628637 - 17628689
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctc 162  Q
    |||||| ||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  17628637 gaaatatgctgaaaacagcttatggacatgtcataagttgtttccataagctc 17628689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 25479620 - 25479680
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    ||||||||| ||||||||| ||| |||||||||||  ||||||||||||||| | ||||||    
T  25479620 aaataagctgaaaacaactaatgaacatgtcataatctattttcataagctcacacaaata 25479680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 107 - 171
Target Start/End: Original strand, 30257718 - 30257782
Alignment:
Q  107 atagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    ||||||||||||| |||||| |||||| |||||||||||   ||||| ||||||||||| |||||    
T  30257718 atagaaataagctgaaaacagcttatgaacatgtcataaaagatttttataagctctcctaaata 30257782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 121 - 169
Target Start/End: Original strand, 48282173 - 48282221
Alignment:
Q  121 aaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||| ||||||||||||||||  ||||||||||||||||| ||||    
T  48282173 aaaacaacgtatggacatgtcataacctattttcataagctctctcaaa 48282221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 48830182 - 48830142
Alignment:
Q  37 aaagataaaatcaagtcaaactatttttatataagctataa 77  Q
    ||||||||||| ||||||||||||||| |||||||||||||    
T  48830182 aaagataaaataaagtcaaactattttcatataagctataa 48830142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 130 - 169
Target Start/End: Complemental strand, 4034029 - 4033990
Alignment:
Q  130 tatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||| |||||||||||||||||||||||||| ||||    
T  4034029 tatggacaagtcataagttattttcataagctctctcaaa 4033990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 11941301 - 11941360
Alignment:
Q  111 aaataagcttaaaacaacttatggaca-tgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||| |||||| |||||| ||| ||| ||||| ||||||||||||||||||||||    
T  11941301 aaataagctgaaaacagcttatgaacaatgttataagctattttcataagctctcccaaa 11941360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 12564531 - 12564472
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||| |||||||||||| ||| ||||||||| ||| | | ||||||||||||||    
T  12564531 gaaataagctgaaaacaacttattgacttgtcataagctatatacgtaagctctcccaaa 12564472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 161
Target Start/End: Complemental strand, 24968448 - 24968397
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagct 161  Q
    ||||||||||  ||||| ||||||||||||||||||||| |||| |||||||    
T  24968448 gaaataagctagaaacagcttatggacatgtcataagttgtttttataagct 24968397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 161
Target Start/End: Original strand, 25432249 - 25432300
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagct 161  Q
    ||||||||||  ||||| ||||||||||||||||||||| |||| |||||||    
T  25432249 gaaataagctagaaacagcttatggacatgtcataagttgtttttataagct 25432300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 146
Target Start/End: Original strand, 27140517 - 27140552
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataag 146  Q
    ||||||||| ||||||||||||||||||||||||||    
T  27140517 aaataagctgaaaacaacttatggacatgtcataag 27140552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 146
Target Start/End: Complemental strand, 27963401 - 27963366
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataag 146  Q
    ||||||||| ||||||||||||||||||||||||||    
T  27963401 aaataagctaaaaacaacttatggacatgtcataag 27963366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 146
Target Start/End: Complemental strand, 28689483 - 28689448
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataag 146  Q
    ||||||||| ||||||||||||||||||||||||||    
T  28689483 aaataagctgaaaacaacttatggacatgtcataag 28689448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 150
Target Start/End: Complemental strand, 34278728 - 34278685
Alignment:
Q  107 atagaaataagcttaaaacaacttatggacatgtcataagttat 150  Q
    ||||||||||||| |||||||| |||| ||||||||||||||||    
T  34278728 atagaaataagctgaaaacaacctatgaacatgtcataagttat 34278685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 43722359 - 43722308
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctc 162  Q
    ||||||||| |||||||| || | |||||||||||||| |||||||||||||    
T  43722359 aaataagctgaaaacaacataagaacatgtcataagtttttttcataagctc 43722308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 45107555 - 45107626
Alignment:
Q  6 taagtacttatttttaagctgtttctatataaaagataaaatcaagtcaaactatttttatataagctataa 77  Q
    ||||| ||||| | |||||| ||||||||  ||| ||||||| ||||||||||||||| ||||||| |||||    
T  45107555 taagtgcttatctataagctatttctataagaaaaataaaataaagtcaaactattttcatataagttataa 45107626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 47498870 - 47498811
Alignment:
Q  111 aaataagcttaaaacaacttatggaca-tgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||| ||||||||||||| ||| | ||||||| |||||||||||| |||||||||    
T  47498870 aaataagctaaaaacaacttatgaacaatatcataagctattttcataagttctcccaaa 47498811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 6976952 - 6977021
Alignment:
Q  99 gagagttcatagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||| || |||||||| |||||||| |||||| |||||||||||||| ||| ||| ||||||| ||||    
T  6976952 gagagtttatggaaataag-ttaaaacagcttatgaacatgtcataagttgtttccattagctctcgcaaa 6977021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 11584528 - 11584586
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||| ||||||| ||  ||||| ||||||||||| ||||||||||||||||| |||||    
T  11584528 aaatatgcttaaagcagtttatgaacatgtcataaattattttcataagctcttccaaa 11584586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 15360857 - 15360899
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataag 78  Q
    |||||||||||| |||||||||| |||| ||||||||||||||    
T  15360857 aaaagataaaataaagtcaaactgttttcatataagctataag 15360899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 145
Target Start/End: Complemental strand, 16981967 - 16981933
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataa 145  Q
    ||||||||| |||||||||||||||||||||||||    
T  16981967 aaataagctaaaaacaacttatggacatgtcataa 16981933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 26461972 - 26461914
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||| ||||||||  ||||||||| |||| ||| |||||||||||||| |||||    
T  26461972 aaataagctgaaaacaacccatggacatgccatatgttgttttcataagctctgccaaa 26461914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 27145586 - 27145636
Alignment:
Q  116 agcttaaaacaacttatggacatgtcataagttattttcataagctctccc 166  Q
    |||| |||| ||||||||||||||||||||| | ||| |||||||||||||    
T  27145586 agctgaaaataacttatggacatgtcataagctttttccataagctctccc 27145636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 148
Target Start/End: Original strand, 30371186 - 30371224
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagtt 148  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  30371186 gaaataagctgaaaacaacttatggacatgtcattagtt 30371224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 32515476 - 32515414
Alignment:
Q  107 atagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||| ||||| | |||||||||||| ||||||||||| | | ||| ||||||||||||||||    
T  32515476 atagatataagttgaaaacaacttattgacatgtcatacgctgtttccataagctctcccaaa 32515414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 169
Target Start/End: Original strand, 38001639 - 38001693
Alignment:
Q  115 aagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||| ||||||||||||| ||| |||||||| | |||||||||| |||||||||    
T  38001639 aagctgaaaacaacttatgaacaggtcataagctgttttcataagttctcccaaa 38001693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 159
Target Start/End: Original strand, 42336664 - 42336702
Alignment:
Q  121 aaaacaacttatggacatgtcataagttattttcataag 159  Q
    |||||||||| ||||||||||||||||| ||||||||||    
T  42336664 aaaacaacttttggacatgtcataagttgttttcataag 42336702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 4549888 - 4549945
Alignment:
Q  112 aataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||| ||||||||||||| |||||||||||  | |||||| ||| |||||||||    
T  4549888 aataagctgaaaacaacttatgaacatgtcataatctgttttcagaagttctcccaaa 4549945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 17269290 - 17269347
Alignment:
Q  112 aataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||| | ||||||||| ||| |||||||||||| ||||||||||||| || |||||    
T  17269290 aataagttaaaaacaactcatgaacatgtcataaggtattttcataagcactaccaaa 17269347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 125 - 158
Target Start/End: Complemental strand, 29045929 - 29045896
Alignment:
Q  125 caacttatggacatgtcataagttattttcataa 158  Q
    |||||||||||||||||||||||| |||||||||    
T  29045929 caacttatggacatgtcataagttgttttcataa 29045896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 30418198 - 30418153
Alignment:
Q  126 aacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    ||||||||||||||||||||||| ||| |||||| ||| |||||||    
T  30418198 aacttatggacatgtcataagttgtttccataaggtctaccaaata 30418153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 31118081 - 31118130
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataag 159  Q
    |||||||||| ||||||||| ||| |||||||||||| | ||||||||||    
T  31118081 gaaataagctgaaaacaactgatgaacatgtcataagatgttttcataag 31118130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 40833941 - 40833900
Alignment:
Q  37 aaagataaaatcaagtcaaactatttttatataagctataag 78  Q
    ||||||||||| || ||||||| |||||||||||||||||||    
T  40833941 aaagataaaataaaatcaaactgtttttatataagctataag 40833900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 44936697 - 44936656
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataa 77  Q
    ||||||||| || ||||||||||||||| |||||||||||||    
T  44936697 aaaagataagataaagtcaaactattttcatataagctataa 44936656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 47261547 - 47261608
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    |||||||||| ||||| ||| ||| ||||||||||||||  ||  |||||||||||||||||    
T  47261547 gaaataagctgaaaaccactaatgaacatgtcataagttgcttctataagctctcccaaata 47261608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 49692078 - 49692025
Alignment:
Q  116 agcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||| |||||||  ||||||||||||||||| |||||||||||| |||| ||||    
T  49692078 agctgaaaacaaactatggacatgtcataagctattttcataagttctctcaaa 49692025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 147
Target Start/End: Original strand, 3224462 - 3224498
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagt 147  Q
    ||||||||| | |||||||||||||||||||||||||    
T  3224462 aaataagctgagaacaacttatggacatgtcataagt 3224498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 5082804 - 5082840
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagc 72  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  5082804 aaaagattaaatcaagttaaactatttttatataagc 5082840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 6659719 - 6659779
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    |||| |||| ||||||||||||||||||| || | ||| || ||||||||| |||||||||    
T  6659719 aaatgagctgaaaacaacttatggacatgccaaatgttgttatcataagctatcccaaata 6659779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 17631116 - 17631080
Alignment:
Q  128 cttatggacatgtcataagttattttcataagctctc 164  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  17631116 cttatggacatgtcataagttgtttccataagctctc 17631080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 169
Target Start/End: Original strand, 19389951 - 19389999
Alignment:
Q  121 aaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||||||| |||| ||||||||| |||||||| | |||||||||    
T  19389951 aaaacaacttatgaacatatcataagtttttttcatacgttctcccaaa 19389999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 170
Target Start/End: Complemental strand, 24502860 - 24502800
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaat 170  Q
    |||||||||| ||||||| |||| ||||||||||||||| |||   ||||||||| |||||    
T  24502860 gaaataagctgaaaacaaattattgacatgtcataagttgtttctgtaagctctctcaaat 24502800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 146
Target Start/End: Complemental strand, 27887218 - 27887114
Alignment:
Q  43 aaaatcaagtcaaactatttttatataagctataagctttttt-atcagctgtaatagagagttcatagaaataagcttaaaacaacttatggacatgtc 141  Q
    ||||| ||||||||| ||||  |||||||||||||| | |||| || | || | || |||||   ||| ||||||||| ||||||| |||||||||||||    
T  27887218 aaaataaagtcaaacaatttccatataagctataagttgttttcataaactatcatggagagcatataaaaataagctaaaaacaatttatggacatgtc 27887119  T
Q  142 ataag 146  Q
    |||||    
T  27887118 ataag 27887114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 171
Target Start/End: Original strand, 28467496 - 28467532
Alignment:
Q  135 acatgtcataagttattttcataagctctcccaaata 171  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  28467496 acatgtcataagttatttccataatctctcccaaata 28467532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 32958616 - 32958656
Alignment:
Q  37 aaagataaaatcaagtcaaactatttttatataagctataa 77  Q
    ||||||||||| ||||||||||||||| | |||||||||||    
T  32958616 aaagataaaattaagtcaaactattttcagataagctataa 32958656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 34290275 - 34290335
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    ||||||||| ||||||||||||| | |||||||||| | |||| ||||  |||||||||||    
T  34290275 aaataagctgaaaacaacttatgaatatgtcataagcttttttaataaattctcccaaata 34290335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 35925717 - 35925777
Alignment:
Q  99 gagagttcatagaaataagcttaaaacaacttatggacatgtcataagttattttcataag 159  Q
    ||||||| || |||||||| | |||||| |||||| |||||||||||| | ||||||||||    
T  35925717 gagagtttatggaaataagttgaaaacagcttatgaacatgtcataagctgttttcataag 35925777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 38578567 - 38578615
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataag 159  Q
    ||||||||| ||||||||||||| | |||| ||||||| ||||||||||    
T  38578567 aaataagctcaaaacaacttatgaatatgttataagttgttttcataag 38578615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 153
Target Start/End: Original strand, 47917273 - 47917317
Alignment:
Q  109 agaaataagcttaaaacaacttatggacatgtcataagttatttt 153  Q
    ||||||||| | ||||||||||||| |||||||||||||| ||||    
T  47917273 agaaataagttgaaaacaacttatgaacatgtcataagttttttt 47917317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 111 - 146
Target Start/End: Complemental strand, 2773642 - 2773607
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataag 146  Q
    ||||||||||||||||| ||||||||||| ||||||    
T  2773642 aaataagcttaaaacaaattatggacatgccataag 2773607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 153
Target Start/End: Complemental strand, 3597313 - 3597270
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttatttt 153  Q
    |||||||||| |||| | ||||||| ||||||||||||||||||    
T  3597313 gaaataagctgaaaatagcttatggccatgtcataagttatttt 3597270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 145
Target Start/End: Original strand, 4549268 - 4549303
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataa 145  Q
    |||||||||| |||||||||||| ||||||||||||    
T  4549268 gaaataagctgaaaacaacttatagacatgtcataa 4549303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 111 - 146
Target Start/End: Original strand, 4622132 - 4622167
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataag 146  Q
    ||||||||| |||||| |||||||||||||||||||    
T  4622132 aaataagctaaaaacagcttatggacatgtcataag 4622167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 4768861 - 4768802
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||| ||||||| ||||||||||||| |||| | ||||| |||| | |||||||    
T  4768861 gaaataagctgaaaacaagttatggacatgtcgtaagctgttttcgtaagttttcccaaa 4768802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 111 - 146
Target Start/End: Complemental strand, 5887025 - 5886990
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataag 146  Q
    ||||||||| ||||||||||||| ||||||||||||    
T  5887025 aaataagctgaaaacaacttatgaacatgtcataag 5886990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 60 - 146
Target Start/End: Original strand, 9507231 - 9507318
Alignment:
Q  60 tttttatataagctataagctttttta-tcagctgtaatagagagttcatagaaataagcttaaaacaacttatggacatgtcataag 146  Q
    ||||| |||||| |||||||||||||| |||||| || | |||| || || ||||||||||||||| | |||| |  |||||||||||    
T  9507231 tttttgtataagatataagcttttttattcagctatattggagattttatggaaataagcttaaaatagcttacgagcatgtcataag 9507318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 113 - 148
Target Start/End: Complemental strand, 15064864 - 15064829
Alignment:
Q  113 ataagcttaaaacaacttatggacatgtcataagtt 148  Q
    ||||||| |||||||||||||||||| |||||||||    
T  15064864 ataagctgaaaacaacttatggacatatcataagtt 15064829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 38 - 85
Target Start/End: Original strand, 15361678 - 15361725
Alignment:
Q  38 aagataaaatcaagtcaaactatttttatataagctataagctttttt 85  Q
    |||||||| | |||||||| |||||| |||||||||||||||| ||||    
T  15361678 aagataaagtaaagtcaaattattttcatataagctataagctgtttt 15361725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 24460438 - 24460391
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataa 158  Q
    |||||||||  ||||| |||||| |||||||||||| |||||||||||    
T  24460438 aaataagctggaaacagcttatgaacatgtcataagctattttcataa 24460391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 163
Target Start/End: Original strand, 27145965 - 27146012
Alignment:
Q  116 agcttaaaacaacttatggacatgtcataagttattttcataagctct 163  Q
    |||| |||| ||||||||||||||||||||| | ||| ||||||||||    
T  27145965 agctgaaaataacttatggacatgtcataagctgtttccataagctct 27146012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 145
Target Start/End: Complemental strand, 28935908 - 28935873
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataa 145  Q
    |||||||||| |||| ||||||||||||||||||||    
T  28935908 gaaataagctaaaaaaaacttatggacatgtcataa 28935873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 29635386 - 29635433
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataa 158  Q
    ||||||||| ||||||||||||  ||||||||||| || |||||||||    
T  29635386 aaataagctgaaaacaacttataaacatgtcataacttgttttcataa 29635433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 111 - 166
Target Start/End: Complemental strand, 39270456 - 39270401
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctccc 166  Q
    ||||||| | |||||| |||||||||||| || ||| | |||||||||||||||||    
T  39270456 aaataagttgaaaacagcttatggacatgccaaaagctgttttcataagctctccc 39270401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 36 - 75
Target Start/End: Complemental strand, 41516187 - 41516148
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctat 75  Q
    |||||||||||  ||||||||||||||| |||||||||||    
T  41516187 aaaagataaaagaaagtcaaactattttcatataagctat 41516148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 4e-21; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 4e-21
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 28769441 - 28769310
Alignment:
Q  41 ataaaatcaagtcaaactatttttatataagctataagctttttt-atcagctgtaatagagagttcatagaaataagcttaaaacaacttatggacatg 139  Q
    ||||||| |||||||||||||||  ||||||||||||||| |||| || |||| |  | ||||||| || |||||||||| ||||||||||||||||||     
T  28769441 ataaaattaagtcaaactattttcttataagctataagctgttttcataagctattttggagagtttatggaaataagctgaaaacaacttatggacata 28769342  T
Q  140 tcataagttattttcataagctctcccaaata 171  Q
    ||||| | ||||| || |||||||| ||||||    
T  28769341 tcatatgctatttacacaagctctctcaaata 28769310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 107 - 165
Target Start/End: Original strand, 14949901 - 14949959
Alignment:
Q  107 atagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcc 165  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  14949901 atagaaataagctgaaaacagcttatggacatgtcataagttattttcataagctctcc 14949959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 25869309 - 25869240
Alignment:
Q  99 gagagttcatagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaa 168  Q
    ||||||| || |||||||||| |||||||||||||||||||||||||||||||| ||||  |||||||||    
T  25869309 gagagtttatggaaataagctgaaaacaacttatggacatgtcataagttatttccatagactctcccaa 25869240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 20 - 159
Target Start/End: Original strand, 4558744 - 4558885
Alignment:
Q  20 taagctgtttctata-taaaagataaaatcaagtcaaactatttttatataagctataagct-tttttatcagctgtaatagagagttcatagaaataag 117  Q
    |||||| |||||||| ||||||||||||| |||| ||| |||||| ||||| |||||||||| |||  || |||| |  ||||||| | || |||||||     
T  4558744 taagctatttctataataaaagataaaataaagttaaattattttcatatatgctataagctgtttccataagctatcctagagagcttatggaaataaa 4558843  T
Q  118 cttaaaacaacttatggacatgtcataagttattttcataag 159  Q
    || |||||||||||| ||||  ||||||||||||| ||||||    
T  4558844 ctaaaaacaacttatagacacatcataagttatttccataag 4558885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 6950360 - 6950419
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||| |||||||||||| ||||||||||| ||| ||| ||||||||||||||||    
T  6950360 gaaataagctgaaaacaacttatcgacatgtcataggttgtttacataagctctcccaaa 6950419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 107 - 169
Target Start/End: Original strand, 9572905 - 9572967
Alignment:
Q  107 atagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||| ||||| | |||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  9572905 atagatataaggtaaaaacaacttatggacatgtcataagttattttcgtaagttctcacaaa 9572967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 6 - 156
Target Start/End: Complemental strand, 11188293 - 11188141
Alignment:
Q  6 taagtacttatttttaagctgtttctatat-aaaagataaaatcaagtcaaactatttttatataagctataagctttttt-atcagctgtaatagagag 103  Q
    ||||| ||||| | |||| ||||||||||  |||||||||||| ||  |||||||||||||||| || ||||| || |||| || |||| |  |||||||    
T  11188293 taagtgcttatgtataagttgtttctataacaaaagataaaataaaaccaaactatttttatattagttataaactattttgataagctatcctagagag 11188194  T
Q  104 ttcatagaaataagcttaaaacaacttatggacatgtcataagttattttcat 156  Q
    || || | ||||| || ||||||| |||| ||||||||||||| | |||||||    
T  11188193 tttatggtaataaactgaaaacaagttatagacatgtcataagctgttttcat 11188141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 4055648 - 4055589
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||| ||||||  ||||||||||||||||||||||||  |||| ||||||||||    
T  4055648 gaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaa 4055589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 152
Target Start/End: Original strand, 12361125 - 12361272
Alignment:
Q  7 aagtacttatttttaagctgtttctatata-aaagataaaatcaagtcaaactatttttatataagctataagct-tttttatcagctgtaatagagagt 104  Q
    |||||||||| | |||| | |||||||| | ||||||||||| |||||||| | |||| |||||||||||||||| |||| || || | |    |||||     
T  12361125 aagtacttatatataagttatttctataaataaagataaaatgaagtcaaattgttttcatataagctataagctgttttcataagttattcaggagagc 12361224  T
Q  105 tcatagaaataagcttaaaacaacttatggacatgtcataagttattt 152  Q
    | || |||||||| | |||||| ||||||||||||||||||| |||||    
T  12361225 taatggaaataagttgaaaacagcttatggacatgtcataagctattt 12361272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 30191173 - 30191114
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||| ||||||| || || |||||||||||||| ||| ||||||||||||||||    
T  30191173 gaaataagctgaaaacaagttttgaacatgtcataagttgtttccataagctctcccaaa 30191114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 152
Target Start/End: Original strand, 31705046 - 31705165
Alignment:
Q  35 taaaagataaaatcaagtcaaacta-tttttatataagctataagct-tttttatcagctgtaatagagagttcatagaaataagcttaaaacaacttat 132  Q
    ||||||||||||||| |||||| ||  ||| |||||||||||||||| |||| || ||||||  | ||||||| || |||||||||| |||||| |||||    
T  31705046 taaaagataaaatcatgtcaaattacgtttcatataagctataagctgttttcataagctgtccttgagagtttatggaaataagctgaaaacagcttat 31705145  T
Q  133 ggacatgtcataagttattt 152  Q
    | |||| || |||| |||||    
T  31705146 gcacatctcttaagctattt 31705165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 32841017 - 32840958
Alignment:
Q  111 aaataagcttaaaacaacttatggaca-tgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||| ||||||||||||| ||| ||||||||||| |||||||||| |||||||||    
T  32841017 aaataagctgaaaacaacttatgaacaatgtcataagttgttttcataagttctcccaaa 32840958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 1470980 - 1470914
Alignment:
Q  20 taagctgtttctata-taaaagataaaatcaagtcaaactatttttatataagctataagctttttt 85  Q
    |||||| |||||||| ||||||||||||| |||||||| || ||| |||||||||||||||| ||||    
T  1470980 taagctatttctataataaaagataaaataaagtcaaattactttcatataagctataagctgtttt 1470914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 8066801 - 8066747
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcc 165  Q
    ||||||||| |||| |||||||||||||||||| ||  |||||||||||||||||    
T  8066801 aaataagctgaaaaaaacttatggacatgtcatcagcgattttcataagctctcc 8066747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 9541027 - 9540969
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||| || |||| |||||||||||||||||| | ||| ||||||||||||||||    
T  9541027 aaataagctgaacacaaattatggacatgtcataagatgtttccataagctctcccaaa 9540969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 30389138 - 30389196
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||| ||||||||||||| ||||||||| || |||||||||| |||||| ||||    
T  30389138 aaataagctgaaaacaacttatgaacatgtcattagctattttcatatgctctctcaaa 30389196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 11569488 - 11569435
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctc 164  Q
    ||||||||| ||||||||||||| |||||||||||| | ||| |||||||||||    
T  11569488 aaataagctgaaaacaacttatgtacatgtcataagctgtttccataagctctc 11569435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 3161654 - 3161606
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataag 159  Q
    ||||||||| ||||||  ||||| |||||||||||||||||||||||||    
T  3161654 aaataagctgaaaacattttatgaacatgtcataagttattttcataag 3161606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 30277290 - 30277234
Alignment:
Q  97 tagagagttcatagaaataagcttaaaacaacttatggacatgtcataagttatttt 153  Q
    ||||||||| || |||||||||| |||||||||||||| |||||| |||| ||||||    
T  30277290 tagagagtttatggaaataagctgaaaacaacttatggccatgtcctaagctatttt 30277234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 114 - 150
Target Start/End: Original strand, 38421306 - 38421342
Alignment:
Q  114 taagcttaaaacaacttatggacatgtcataagttat 150  Q
    |||||| ||||||||||||||||||||||||||||||    
T  38421306 taagctgaaaacaacttatggacatgtcataagttat 38421342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 7918466 - 7918419
Alignment:
Q  122 aaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||| |||||| ||||||| |||||| ||||||||||||||||||||    
T  7918466 aaacagcttatgaacatgtcttaagttgttttcataagctctcccaaa 7918419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 30918151 - 30918209
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||| ||||||||||||| | |||||| ||||| ||||||||||||||| ||||    
T  30918151 gaaataagctgaaaacaacttatgaa-atgtcacaagttgttttcataagctctctcaaa 30918209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 33808342 - 33808401
Alignment:
Q  111 aaataagcttaaaacaacttatggaca-tgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||| ||||||||||||| ||| | ||||||| |||||||||||| |||||||||    
T  33808342 aaataagctaaaaacaacttatgaacaatatcataagctattttcataagttctcccaaa 33808401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 161
Target Start/End: Original strand, 2699269 - 2699395
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataagct-tttttatcagctgtaatagagagttcatagaaataagcttaaaacaacttatgg 134  Q
    |||| ||||||| |||| |||||||||| ||||||| ||| |||  ||||||| || ||| |||||||| | |||  ||||||||  |||||||| |||     
T  2699269 aaaatataaaataaagttaaactattttcatataagttattagccgtttttataagttgtcatagagagcttataataataagctggaaacaactcatga 2699368  T
Q  135 acatgtcataagttattttcataagct 161  Q
    | |||||||||||| |||  |||||||    
T  2699369 atatgtcataagttgtttctataagct 2699395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 159
Target Start/End: Original strand, 10358627 - 10358665
Alignment:
Q  121 aaaacaacttatggacatgtcataagttattttcataag 159  Q
    ||||| ||||||| |||||||||||||||||||||||||    
T  10358627 aaaacgacttatgaacatgtcataagttattttcataag 10358665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 148
Target Start/End: Complemental strand, 13000456 - 13000418
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagtt 148  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  13000456 gaaataagctgaaaacaacttgtggacatgtcataagtt 13000418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 31315562 - 31315524
Alignment:
Q  34 ataaaagataaaatcaagtcaaactatttttatataagc 72  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  31315562 ataaaagataaaataaagtcaaactatttttatgtaagc 31315524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 45071160 - 45071214
Alignment:
Q  31 tatataaaagataaaatcaagtcaaactatttttatataagctataagctttttt 85  Q
    |||| |||||| ||||| |||||||| | ||||||||||||||||||||| ||||    
T  45071160 tatacaaaagacaaaataaagtcaaattgtttttatataagctataagctgtttt 45071214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 112 - 153
Target Start/End: Complemental strand, 2595027 - 2594986
Alignment:
Q  112 aataagcttaaaacaacttatggacatgtcataagttatttt 153  Q
    |||||||| ||||||||||||| |||||||||||||| ||||    
T  2595027 aataagctgaaaacaacttatgaacatgtcataagttgtttt 2594986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 8255430 - 8255491
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    |||||||| | ||||||||||||| ||||||||| |||| ||| |||||| |||| ||||||    
T  8255430 gaaataaggtgaaaacaacttatgcacatgtcattagttgtttccataagttctctcaaata 8255491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 36 - 148
Target Start/End: Complemental strand, 12225006 - 12224893
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataagctttttt-atcagctgtaatagagagttcatagaaataagcttaaaacaacttatgg 134  Q
    |||||||||||| ||||||||||||||| ||||  | ||||||||  ||| || |||  |  |  |||| ||||| ||||||||| |||| |||| ||||    
T  12225006 aaaagataaaataaagtcaaactattttcatatggggtataagctactttcataagccatcctgaagagctcataaaaataagctgaaaaaaactgatgg 12224907  T
Q  135 acatgtcataagtt 148  Q
    ||||||||||||||    
T  12224906 acatgtcataagtt 12224893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 26479823 - 26479884
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    |||||| ||| |||| ||||||| |||||| |||||||| ||| ||||||||||| ||||||    
T  26479823 gaaatacgctgaaaaaaacttatagacatgacataagttgtttccataagctctcgcaaata 26479884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 27119961 - 27119912
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataag 159  Q
    |||||||||| |||||||||||| |||||||||| |||  ||||||||||    
T  27119961 gaaataagctgaaaacaacttatagacatgtcattagtggttttcataag 27119912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 169
Target Start/End: Complemental strand, 28784904 - 28784766
Alignment:
Q  34 ataaaagataaaatcaagtcaaactatttttatataagctataagctttttt-atcagctgtaatagagagttcatagaaataagcttaaaacaacttat 132  Q
    |||||||||||||| |||||||| | |||| |||| || | |||||| |||| || |||| |  ||||||| |  || ||||||||| |||| | |||||    
T  28784904 ataaaagataaaataaagtcaaattgttttgatatcagttgtaagctattttcataagctatcttagagagcttgtaaaaataagctgaaaa-agcttat 28784806  T
Q  133 ggacatgtcataa---gttattttcataagctctcccaaa 169  Q
    | |||||||||||   ||| ||||||||||||||||||||    
T  28784805 gaacatgtcataataagttgttttcataagctctcccaaa 28784766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 42 - 161
Target Start/End: Original strand, 29973050 - 29973171
Alignment:
Q  42 taaaatcaagtcaaactatttttatataagctataagct-tttttatcagctgtaatagagagttcatagaaataagcttaaaa-caacttatggacatg 139  Q
    |||||| ||||||||||||||| | |||||||||||| | |||| || |||| |  | ||||||| || ||||||| || |||| || ||| ||||||||    
T  29973050 taaaataaagtcaaactattttcacataagctataagttgttttcataagctatccttgagagtttatggaaataaactgaaaaccagcttttggacatg 29973149  T
Q  140 tcataagttattttcataagct 161  Q
    || |||||| |||||| |||||    
T  29973150 tcgtaagttgttttcacaagct 29973171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 30259152 - 30259213
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    ||||||| || |||||||||||| ||||| ||||||| | ||| ||||||||||| ||||||    
T  30259152 gaaataaactgaaaacaacttatagacatatcataagctgtttccataagctctctcaaata 30259213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 30988005 - 30987964
Alignment:
Q  128 cttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||||||||||||||| ||| ||||||||||| ||||    
T  30988005 cttatggacatgtcataagttgtttccataagctctctcaaa 30987964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 107 - 140
Target Start/End: Complemental strand, 42015585 - 42015552
Alignment:
Q  107 atagaaataagcttaaaacaacttatggacatgt 140  Q
    ||||||||||||| ||||||||||||||||||||    
T  42015585 atagaaataagctgaaaacaacttatggacatgt 42015552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 43709318 - 43709359
Alignment:
Q  128 cttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||    
T  43709318 cttatagacatgtcataagttatttccataagctcacccaaa 43709359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 128 - 165
Target Start/End: Original strand, 45071430 - 45071467
Alignment:
Q  128 cttatggacatgtcataagttattttcataagctctcc 165  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  45071430 cttatagacatgtcataagttgttttcataagctctcc 45071467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 779092 - 779044
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataag 159  Q
    ||||||| | ||||||||||||| |||||||||||||| ||||| ||||    
T  779092 aaataagatgaaaacaacttatgaacatgtcataagttgttttcgtaag 779044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 3254260 - 3254312
Alignment:
Q  107 atagaaataagcttaaaacaacttatggacatgtcataagttattttcataag 159  Q
    ||||||||||||| |||||| |||||| |||||||||||| | ||||| ||||    
T  3254260 atagaaataagctgaaaacagcttatgaacatgtcataagctgttttcttaag 3254312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 6875386 - 6875332
Alignment:
Q  20 taagctgtttctata---taaaagataaaatcaagtcaaactatttttatataag 71  Q
    |||||||||||||||   ||||||| ||||| ||||||||||||||| |||||||    
T  6875386 taagctgtttctataacataaaagacaaaataaagtcaaactattttcatataag 6875332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 169
Target Start/End: Original strand, 8629505 - 8629553
Alignment:
Q  121 aaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||||||  ||||||||||||| |||||||||| |||| ||||    
T  8629505 aaaacaacttatgatcatgtcataagttgttttcataagttctctcaaa 8629553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 9700040 - 9700100
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    ||||||| | |||||| |||||||||||||||||| ||  ||||| |||||||| ||||||    
T  9700040 aaataaggtgaaaacagcttatggacatgtcataaattgatttcacaagctctctcaaata 9700100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 10075645 - 10075609
Alignment:
Q  49 aagtcaaactatttttatataagctataagctttttt 85  Q
    ||||||||||||||||||||||| |||||||| ||||    
T  10075645 aagtcaaactatttttatataagttataagctatttt 10075609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 11376742 - 11376802
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    ||||||||| |||||||  |||  |||||||| ||| |||||||||||| |||||||||||    
T  11376742 aaataagctgaaaacaagatattaacatgtcacaagctattttcataagttctcccaaata 11376802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 146
Target Start/End: Original strand, 11795038 - 11795166
Alignment:
Q  20 taagctgtttctat-ataaaagataaaatcaagtcaaactatttttatataagctataagctttttt-atcagctgtaatagagagttcatagaaataag 117  Q
    |||||| ||||||| | |||| ||| ||| |||||| ||| |||| ||||||| ||||||||  ||| || |||| | || ||||| | || ||||||||    
T  11795038 taagctttttctatgacaaaacatacaataaagtcacactgttttcatataagttataagctgatttcataagctattatggagagcttatggaaataag 11795137  T
Q  118 cttaaaacaacttatggacatgtcataag 146  Q
    || ||||||  ||||||||||||||||||    
T  11795138 ctgaaaacaggttatggacatgtcataag 11795166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 24258105 - 24258157
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctct 163  Q
    |||||||||||||| ||| |||| ||||||||||| || |||||| |||||||    
T  24258105 aaataagcttaaaataacctatgtacatgtcataaattgttttcacaagctct 24258157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 29168679 - 29168643
Alignment:
Q  128 cttatggacatgtcataagttattttcataagctctc 164  Q
    ||||||||||||||||||| | |||||||||||||||    
T  29168679 cttatggacatgtcataagctgttttcataagctctc 29168643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 169
Target Start/End: Complemental strand, 39551318 - 39551182
Alignment:
Q  34 ataaaagataaaatcaagtcaaactatttttatataagctataagctttttt-atcagctgtaatagagagttcatagaaataagcttaaaacaacttat 132  Q
    |||||||||||||| |||  ||||| | || ||| |||||||||| | |||| || |||| |  | ||||| | ||| ||||||| | |||||| ||| |    
T  39551318 ataaaagataaaataaagctaaactgtcttcatacaagctataagttgttttcataagctttcctggagagcttataaaaataagttaaaaacagctttt 39551219  T
Q  133 ggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||||||||| ||| |||||  |||||||||    
T  39551218 ggacatgtcataagttgtttccataaattctcccaaa 39551182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 40071806 - 40071846
Alignment:
Q  129 ttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||| |||||||||||||| ||| ||||||||||||||||    
T  40071806 ttatgaacatgtcataagttgtttccataagctctcccaaa 40071846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 169
Target Start/End: Original strand, 2093314 - 2093377
Alignment:
Q  107 atagaaataagcttaaaa-caacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||||||| |||| ||||||||   ||  |||||| |||||||||||||||||||||||    
T  2093314 atagaaataagctaaaaaacaacttatctgcacatcataaattattttcataagctctcccaaa 2093377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 38 - 85
Target Start/End: Original strand, 2482830 - 2482877
Alignment:
Q  38 aagataaaatcaagtcaaactatttttatataagctataagctttttt 85  Q
    |||||||||| |||||||| | ||||| ||||||||||||||| ||||    
T  2482830 aagataaaataaagtcaaaatgtttttgtataagctataagctgtttt 2482877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 2605982 - 2606017
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataag 71  Q
    |||||||||||| |||||||||||||| ||||||||    
T  2605982 aaaagataaaattaagtcaaactatttctatataag 2606017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 38 - 85
Target Start/End: Complemental strand, 6509408 - 6509361
Alignment:
Q  38 aagataaaatcaagtcaaactatttttatataagctataagctttttt 85  Q
    |||||||||| |||||||| | | ||||||||||||||||||| ||||    
T  6509408 aagataaaataaagtcaaattgtatttatataagctataagctgtttt 6509361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 26820162 - 26820205
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataagc 79  Q
    |||||||||||| |||||||||||||||  ||||| ||||||||    
T  26820162 aaaagataaaataaagtcaaactattttgttataaactataagc 26820205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 29169968 - 29169909
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||| |||| |||| | |||||||| |||||||| | | ||||||||||||||||||||    
T  29169968 gaaatgagctaaaaatagcttatggatatgtcatatgctgttttcataagctctcccaaa 29169909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 31142614 - 31142575
Alignment:
Q  41 ataaaatcaagtcaaactatttttatataagctataagct 80  Q
    ||||||| ||||||||||||||| |||||| |||||||||    
T  31142614 ataaaatgaagtcaaactattttcatataaactataagct 31142575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 41620322 - 41620275
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataa 158  Q
    ||||||||  ||||||||||||||||||||||||| || ||| |||||    
T  41620322 aaataagcggaaaacaacttatggacatgtcataatttgtttccataa 41620275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 70)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 169
Target Start/End: Complemental strand, 281955 - 281821
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataagctttttt-atcagctgtaatagagagttcatagaaataagcttaaaacaacttatgg 134  Q
    |||||||||||| |||||||  | |||| |||||||||||||||| | || || |||| |  ||||||| |||| |||||||||| |||||||||||| |    
T  281955 aaaagataaaataaagtcaacttgttttcatataagctataagctgtgttcataagctatcctagagagctcatggaaataagctgaaaacaacttatag 281856  T
Q  135 acatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||||||||  || ||| ||||||||||||    
T  281855 acatgtcataagttgcttccattagctctcccaaa 281821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 6e-17
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 9027617 - 9027669
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctct 163  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  9027617 aaataagctgaaaacaacttatggacatgtcataagttatttccataagctct 9027669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 169
Target Start/End: Original strand, 30863281 - 30863343
Alignment:
Q  107 atagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||| |||||| ||||||||||||| |||||||||||||| |||||||||||||| |||||    
T  30863281 atagaagtaagctgaaaacaacttatgtacatgtcataagttgttttcataagctctaccaaa 30863343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 36 - 164
Target Start/End: Complemental strand, 2027513 - 2027384
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataagct-tttttatcagctgtaatagagagttcatagaaataagcttaaaacaacttatgg 134  Q
    |||||||||||| ||||||||||||||| |||||| ||||||||| || | || ||||   ||  |||||| | | ||||||||| |||||| |||||||    
T  2027513 aaaagataaaataaagtcaaactattttcatataacctataagctgttctcataagctagcatgtagagtttaaataaataagctgaaaacagcttatgg 2027414  T
Q  135 acatgtcataagttattttcataagctctc 164  Q
    | |||||||||| | ||||||||| |||||    
T  2027413 aaatgtcataagctgttttcataaactctc 2027384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 20377952 - 20377891
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    |||||||||  |||||||||||| ||||||||||||||| |||||||||||||||| |||||    
T  20377952 gaaataagccgaaaacaacttatagacatgtcataagttgttttcataagctctcctaaata 20377891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 10616572 - 10616512
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    ||||||||| || |||||||| |||||||||||||||| ||| ||||||||||||||||||    
T  10616572 aaataagctgaacacaacttacggacatgtcataagttgtttccataagctctcccaaata 10616512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 1669830 - 1669772
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaa 168  Q
    ||||| |||| |||||| ||||| ||||||||||||||| |||||||||||||||||||    
T  1669830 gaaatgagctgaaaacagcttatagacatgtcataagttgttttcataagctctcccaa 1669772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 2514633 - 2514707
Alignment:
Q  5 gtaagtacttatttttaagctgtttctata-taaaagataaaatcaagtcaaactatttttatataagctataag 78  Q
    |||||| ||||| | |||||| |||||||| ||||||||||||| ||||||||||| |||||||| |||||||||    
T  2514633 gtaagtgcttatgtataagctatttctataataaaagataaaataaagtcaaactaattttatatgagctataag 2514707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 7931758 - 7931705
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctct 163  Q
    |||||||||| ||||||||||| | |||||||||||||| ||||||||||||||    
T  7931758 gaaataagctgaaaacaacttaagaacatgtcataagttgttttcataagctct 7931705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 733212 - 733156
Alignment:
Q  107 atagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctct 163  Q
    ||||||||| ||| |||||||||| ||||||||||||||||||||| ||| ||||||    
T  733212 atagaaatatgctgaaaacaacttgtggacatgtcataagttatttccatcagctct 733156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 32578018 - 32577959
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||| |||||| || | |||||||||||||||| ||||||||||||||| ||||    
T  32578018 gaaataagctgaaaacagctcaaggacatgtcataagttgttttcataagctctctcaaa 32577959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 33498657 - 33498716
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||| |||| ||| ||| ||||||||||||||| |||||||||||||| |||||    
T  33498657 gaaataagctgaaaataacctatagacatgtcataagttgttttcataagctctaccaaa 33498716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 34939551 - 34939610
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||| ||||||||||| |||| ||||||||||| ||| ||||||||||| ||||    
T  34939551 gaaataagctgaaaacaacttacggacgtgtcataagttgtttccataagctctctcaaa 34939610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 40 - 169
Target Start/End: Original strand, 4006681 - 4006811
Alignment:
Q  40 gataaaatcaagtcaaactatttttatataagctataagctttttt-atcagctgtaatagagagttcatagaaataagcttaaaacaacttatggacat 138  Q
    |||||||| |||||||| | ||||||||||||||||||| | |||| || |||| |    ||||| | ||  ||||||||| |||| |||||||||||||    
T  4006681 gataaaataaagtcaaattgtttttatataagctataagttgttttcataagctatccctgagaggttatgaaaataagctgaaaataacttatggacat 4006780  T
Q  139 gtcataagttattttcataagctctcccaaa 169  Q
     || |||||| |||||| ||||||| |||||    
T  4006781 atcgtaagttgttttcacaagctcttccaaa 4006811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 34404756 - 34404698
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||| ||| |||||| |||||| |||||||||||| |||||||||||| |||||||||    
T  34404756 aaatatgctgaaaacagcttatgtacatgtcataagatattttcataagttctcccaaa 34404698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 99 - 165
Target Start/End: Original strand, 34939771 - 34939837
Alignment:
Q  99 gagagttcatagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcc 165  Q
    ||||||| || |||||||||| ||||||| |||||||||||||||||| | ||| | ||||||||||    
T  34939771 gagagtttatggaaataagctgaaaacaatttatggacatgtcataagctgtttccgtaagctctcc 34939837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 27857414 - 27857455
Alignment:
Q  128 cttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||| |||||||||||| ||||||||||||||||||||    
T  27857414 cttatggagatgtcataagttgttttcataagctctcccaaa 27857455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 31338032 - 31338073
Alignment:
Q  128 cttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||||||||||||||| ||||||||||||||| ||||    
T  31338032 cttatggacatgtcataagttgttttcataagctctcacaaa 31338073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 32917253 - 32917294
Alignment:
Q  128 cttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||||||||||||||| ||| ||||||||||||||||    
T  32917253 cttatggacatgtcataagttgtttccataagctctcccaaa 32917294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 33832304 - 33832251
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctc 164  Q
    ||||||||| ||||||||||||  |||||||||||||| |||||||||| ||||    
T  33832304 aaataagctaaaaacaacttataaacatgtcataagttgttttcataagttctc 33832251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 110 - 170
Target Start/End: Complemental strand, 5566209 - 5566149
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaat 170  Q
    |||||||| | |||||||||||||||||||| ||||| | ||||||| ||||||| |||||    
T  5566209 gaaataagttgaaaacaacttatggacatgtaataagctgttttcattagctctcacaaat 5566149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 121 - 169
Target Start/End: Original strand, 5731618 - 5731666
Alignment:
Q  121 aaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||||| |||||| ||||||| |||||||||||||||| |||||    
T  5731618 aaaacaacttacggacatatcataagctattttcataagctctaccaaa 5731666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 10154168 - 10154228
Alignment:
Q  21 aagctgtttctatataaaa-gataaaatcaagtcaaactatttttatataagctataagct 80  Q
    |||||||||||||| |||| |||||||| |||||||||| |||| ||||||| ||||||||    
T  10154168 aagctgtttctatagaaaaagataaaataaagtcaaactgttttcatataagttataagct 10154228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 1402941 - 1403000
Alignment:
Q  19 ttaagctgtttctatat-aaaagataaaatcaagtcaaactatttttatataagctataa 77  Q
    ||||||| ||||||||  |||||||||||| |||| |||||||||| |||||||||||||    
T  1402941 ttaagctatttctataacaaaagataaaataaagttaaactattttcatataagctataa 1403000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 2460183 - 2460124
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||| | |||||||||||  ||||||||||||||| ||| ||||||||||| ||||    
T  2460183 gaaataagttgaaaacaacttaaagacatgtcataagttgtttccataagctctctcaaa 2460124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 161
Target Start/End: Complemental strand, 3217222 - 3217171
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagct 161  Q
    |||||||||| |||||||||||| ||| |||||| |||| ||||||||||||    
T  3217222 gaaataagctgaaaacaacttatcgacgtgtcatcagttgttttcataagct 3217171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 4080952 - 4081015
Alignment:
Q  108 tagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    |||||||||| | ||||||||||||| ||||| |||||||| |||||||||  |||| ||||||    
T  4080952 tagaaataagttgaaaacaacttatgaacatggcataagttgttttcataaaatctctcaaata 4081015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 6310264 - 6310221
Alignment:
Q  128 cttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    ||||| ||||||||||||||| |||||||||||||||| |||||    
T  6310264 cttatagacatgtcataagttgttttcataagctctccaaaata 6310221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 7945916 - 7945857
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||||||||||||| ||  ||||| |||||||| |||||||||  |||||||||    
T  7945916 gaaataagcttaaaacaactaataaacatgccataagttgttttcataatttctcccaaa 7945857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 164
Target Start/End: Complemental strand, 8420306 - 8420175
Alignment:
Q  34 ataaaagataaaatcaagtcaaactatttttatataagctataagctttttta-tcagctgtaatagagagttcatagaaataagcttaaaacaacttat 132  Q
    ||||| |||||||| |||||||||| | |||||||||  |||||||| || |  | |||| |||| ||||| | || |||||||| | |||| | ||| |    
T  8420306 ataaatgataaaataaagtcaaactgtgtttatataaaatataagctgttctcgtaagctataatggagagcttatggaaataagttgaaaatagcttgt 8420207  T
Q  133 ggacatgtcataagttattttcataagctctc 164  Q
    |||||||||||||| |||||  ||||||||||    
T  8420206 ggacatgtcataagctatttctataagctctc 8420175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 20368194 - 20368151
Alignment:
Q  128 cttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    |||||| |||||||||||||| |||||||||| |||||||||||    
T  20368194 cttatgaacatgtcataagttgttttcataagttctcccaaata 20368151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 109 - 164
Target Start/End: Original strand, 22743518 - 22743573
Alignment:
Q  109 agaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctc 164  Q
    ||||||||||| |||||| |||||| |||||| ||||||| ||||||| |||||||    
T  22743518 agaaataagctgaaaacagcttatgaacatgtaataagttgttttcatgagctctc 22743573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 81 - 144
Target Start/End: Complemental strand, 27909699 - 27909636
Alignment:
Q  81 tttttatcagctgtaatagagagttcatagaaataagcttaaaacaacttatggacatgtcata 144  Q
    ||||||| |||| || | ||||| | || |||||||||| ||||||||||||||||||||||||    
T  27909699 tttttataagctttactggagagcttatggaaataagctgaaaacaacttatggacatgtcata 27909636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 153
Target Start/End: Original strand, 28467861 - 28467904
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttatttt 153  Q
    ||||||||||  ||||| ||||||||||||||||||||||||||    
T  28467861 gaaataagctagaaacagcttatggacatgtcataagttatttt 28467904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 171
Target Start/End: Original strand, 34404600 - 34404639
Alignment:
Q  132 tggacatgtcataagttattttcataagctctcccaaata 171  Q
    ||||||||||||||||| ||| ||||||||||||||||||    
T  34404600 tggacatgtcataagttgtttccataagctctcccaaata 34404639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 153
Target Start/End: Complemental strand, 34735872 - 34735829
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttatttt 153  Q
    ||||||||||  ||||| ||||||||||||||||||||||||||    
T  34735872 gaaataagctagaaacagcttatggacatgtcataagttatttt 34735829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 163
Target Start/End: Complemental strand, 738713 - 738659
Alignment:
Q  109 agaaataagcttaaaacaacttatggacatgtcataagttattttcataagctct 163  Q
    ||||||||||| ||||||  ||||||||| |||||||||| ||||||||| ||||    
T  738713 agaaataagctaaaaacagtttatggacacgtcataagttgttttcataaactct 738659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 821838 - 821896
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||| |||||| |||||| |||||||||||  ||||  ||||||||||||||||    
T  821838 aaataagctgaaaacagcttatgaacatgtcataacctattcccataagctctcccaaa 821896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 4420608 - 4420646
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagcta 74  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  4420608 aaaagataaaataaagtcaaactatttttgtataagcta 4420646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 148
Target Start/End: Original strand, 6536985 - 6537023
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagtt 148  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  6536985 gaaataagctgaaaacaacttatgaacatgtcataagtt 6537023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 28641780 - 28641722
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||| |||||| |||||| |||||| ||||| | |||||||||||||| |||||    
T  28641780 aaataagctaaaaacagcttatgaacatgttataagctgttttcataagctctgccaaa 28641722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 31420897 - 31420963
Alignment:
Q  13 ttatttttaagctgtttctata-taaaagataaaatcaagtcaaactatttttatataagctataag 78  Q
    |||||| |||||| |||||||| |||| | |||||| || |||||||||||||||||||| ||||||    
T  31420897 ttatttataagctatttctataataaatggtaaaataaaatcaaactatttttatataagatataag 31420963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 781407 - 781480
Alignment:
Q  98 agagagttcatagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    |||||| | ||||||||| ||| ||||||  | | ||||||||||||| || |||||||||||||| |||||||    
T  781407 agagagcttatagaaatatgctgaaaacagttgacggacatgtcataatttgttttcataagctctgccaaata 781480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 1015430 - 1015494
Alignment:
Q  100 agagttcatagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcc 165  Q
    |||| ||||||||||||||| |||||| ||||||| ||||| ||| ||| |||| |||||||||||    
T  1015430 agagatcatagaaataagctgaaaacatcttatgg-catgttatatgttgttttgataagctctcc 1015494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 7785849 - 7785808
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataa 77  Q
    |||||||||||| |||||||||| |||| |||||||||||||    
T  7785849 aaaagataaaataaagtcaaactcttttcatataagctataa 7785808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 128 - 165
Target Start/End: Complemental strand, 9041474 - 9041437
Alignment:
Q  128 cttatggacatgtcataagttattttcataagctctcc 165  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  9041474 cttatggacatgtcataagctattttcgtaagctctcc 9041437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 30523975 - 30524024
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataag 159  Q
    |||||||||| ||| ||||| ||||||||||||||| || ||||||||||    
T  30523975 gaaataagctaaaagcaactaatggacatgtcataatttgttttcataag 30524024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 30865802 - 30865843
Alignment:
Q  121 aaaacaacttatggacatgtcataagttattttcataagctc 162  Q
    |||||||||||||||||||| ||||| | |||||||||||||    
T  30865802 aaaacaacttatggacatgtgataagctgttttcataagctc 30865843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 107 - 168
Target Start/End: Complemental strand, 31958619 - 31958558
Alignment:
Q  107 atagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaa 168  Q
    ||||||||||||| ||||||  ||| ||||||||||| | |  |||||||||||||||||||    
T  31958619 atagaaataagctaaaaacagattaaggacatgtcattaatggttttcataagctctcccaa 31958558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 121 - 162
Target Start/End: Complemental strand, 33500501 - 33500460
Alignment:
Q  121 aaaacaacttatggacatgtcataagttattttcataagctc 162  Q
    ||||||||||||| ||||||||||| || |||||||||||||    
T  33500501 aaaacaacttatgcacatgtcataaattgttttcataagctc 33500460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 1575934 - 1575982
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataag 159  Q
    ||||||| | |||||| |||||| |||||||||||||| ||||||||||    
T  1575934 aaataagttaaaaacagcttatgaacatgtcataagttgttttcataag 1575982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 146
Target Start/End: Complemental strand, 2167190 - 2167154
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataag 146  Q
    |||||||||| |||||||||||||||||| |||||||    
T  2167190 gaaataagctgaaaacaacttatggacatatcataag 2167154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 146
Target Start/End: Complemental strand, 2178823 - 2178787
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataag 146  Q
    |||||||||| |||||||||||||||||| |||||||    
T  2178823 gaaataagctgaaaacaacttatggacatatcataag 2178787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 162
Target Start/End: Original strand, 4246356 - 4246500
Alignment:
Q  20 taagctgtttctata-taaaagataaaatcaagtcaaactatttttatataagctataagctttttt-atcagctgtaatagagagttcatagaaataag 117  Q
    |||| |||||||||| ||||||||||| | ||||||   | |||| |||||| ||||||||| |||| || |||| | || |||||   ||| |||||||    
T  4246356 taagttgtttctataataaaagataaattgaagtcagtatgttttcatataatctataagctgttttcataagctattatggagagcatataaaaataag 4246455  T
Q  118 cttaaaacaacttatggacatgtcataagttattttcataagctc 162  Q
     | |||||| |||||||||||||||| |||| ||| || ||||||    
T  4246456 ttgaaaacagcttatggacatgtcatgagttgtttccaaaagctc 4246500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 146
Target Start/End: Complemental strand, 7785776 - 7785740
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataag 146  Q
    |||||||||| |||||||||||| |||||||||||||    
T  7785776 gaaataagctgaaaacaacttatagacatgtcataag 7785740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 8035179 - 8035119
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    ||||||| | ||||||| |||||  ||||||||||||| ||||| |||| |||||||||||    
T  8035179 aaataagttgaaaacaagttatgaccatgtcataagttgttttcttaagttctcccaaata 8035119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 169
Target Start/End: Original strand, 8348275 - 8348323
Alignment:
Q  121 aaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||||||| ||||| ||||||| ||||| ||||||||| ||||    
T  8348275 aaaacaacttatggtcatgttataagttgttttcgtaagctctctcaaa 8348323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 27595676 - 27595632
Alignment:
Q  34 ataaaagataaaatcaagtcaaactatttttatataagctataag 78  Q
    |||||||||||||| |||||||| |||||| ||||||||| ||||    
T  27595676 ataaaagataaaataaagtcaaattattttcatataagctgtaag 27595632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 165
Target Start/End: Original strand, 30523652 - 30523752
Alignment:
Q  65 atataagctataagcttttttatcagctgtaatagagagttcatagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctc 164  Q
    |||||||||||||| ||||| || |||| |  | ||||| | |||||||| || | |||||| |||||| ||||| |||||||| ||| |||||| ||||    
T  30523652 atataagctataagttttttcataagctatccttgagaggttatagaaattagttgaaaacagcttatgaacatggcataagttgtttccataagatctc 30523751  T
Q  165 c 165  Q
    |    
T  30523752 c 30523752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 31420984 - 31421036
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctct 163  Q
    ||||||||| ||||||||||||| | |||  ||||||| ||||||||||||||    
T  31420984 aaataagctgaaaacaacttatgaatatgcgataagttgttttcataagctct 31421036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 33887868 - 33887916
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataa 158  Q
    |||||||| | |||||||||| || |||||||||||| |||||||||||    
T  33887868 gaaataagttgaaaacaacttgtgaacatgtcataagctattttcataa 33887916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 133 - 164
Target Start/End: Complemental strand, 725664 - 725633
Alignment:
Q  133 ggacatgtcataagttattttcataagctctc 164  Q
    |||||||||||||||| |||||||||||||||    
T  725664 ggacatgtcataagttgttttcataagctctc 725633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 146
Target Start/End: Original strand, 821460 - 821499
Alignment:
Q  107 atagaaataagcttaaaacaacttatggacatgtcataag 146  Q
    ||||||||||||| ||||| ||||||| ||||||||||||    
T  821460 atagaaataagctgaaaacgacttatgaacatgtcataag 821499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 105 - 164
Target Start/End: Complemental strand, 1810342 - 1810283
Alignment:
Q  105 tcatagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctc 164  Q
    |||| |||||||||| ||| || |||||||||||| ||| |||| |||| ||||||||||    
T  1810342 tcatggaaataagctgaaagcagcttatggacatgccattagttgttttaataagctctc 1810283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 76
Target Start/End: Original strand, 1904783 - 1904818
Alignment:
Q  41 ataaaatcaagtcaaactatttttatataagctata 76  Q
    ||||||| |||||||| |||||||||||||||||||    
T  1904783 ataaaataaagtcaaattatttttatataagctata 1904818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 76
Target Start/End: Original strand, 1909016 - 1909051
Alignment:
Q  41 ataaaatcaagtcaaactatttttatataagctata 76  Q
    ||||||| |||||||| |||||||||||||||||||    
T  1909016 ataaaataaagtcaaattatttttatataagctata 1909051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 10452484 - 10452425
Alignment:
Q  20 taagctgtttctatat-aaaagataaaatcaagtcaaactatttttatataagctataag 78  Q
    |||||| ||||||||  |||| ||||||| || |||||||||||| ||||||||||||||    
T  10452484 taagctatttctataacaaaatataaaataaaatcaaactattttcatataagctataag 10452425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 10616789 - 10616686
Alignment:
Q  66 tataagctataagcttttttatcagctgtaatagagagttcatagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcc 165  Q
    ||||||||||||||| |||| | || | |  |||||  || ||| |||||| || |||||| |||||| |||||||||||| | |||| ||||| |||||    
T  10616789 tataagctataagctgttttttaagttatcttagaggatttataaaaataaactgaaaacagcttatgaacatgtcataaggtgttttgataagttctcc 10616690  T
Q  166 caaa 169  Q
    ||||    
T  10616689 caaa 10616686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 121 - 164
Target Start/End: Original strand, 30865532 - 30865575
Alignment:
Q  121 aaaacaacttatggacatgtcataagttattttcataagctctc 164  Q
    |||||||||| ||  ||||||||||||||||| |||||||||||    
T  30865532 aaaacaacttttgatcatgtcataagttatttccataagctctc 30865575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 32171415 - 32171356
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||| |||| | ||| ||||| ||||||||| | ||||||||||||||| ||||    
T  32171415 gaaataagctgaaaatagcttctggacttgtcataagctgttttcataagctctctcaaa 32171356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 3e-19; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 25 - 169
Target Start/End: Original strand, 21574443 - 21574587
Alignment:
Q  25 tgtttctatataaaagataaaatcaagtcaaactatttttatataagctataagcttttttatcagctgtaatagagagttcatagaaataagcttaaaa 124  Q
    ||||| |||| | |||||||||| |||| ||| | |||  |||||||||||||  |||||||| ||||   || ||||| | || |||||||||| |||     
T  21574443 tgtttttatacacaagataaaataaagttaaattgtttacatataagctataactttttttataagctaacatggagagcttatggaaataagctaaaag 21574542  T
Q  125 caacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    || |||||| |||||||||||||| ||||||||||||||||||||    
T  21574543 cagcttatgaacatgtcataagttgttttcataagctctcccaaa 21574587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 40122888 - 40122724
Alignment:
Q  8 agtacttatttttaagctgtttctatat-aaaagataaaatcaagtcaaactatttttatataagctataagct-tttttatcagctgtaatagagagtt 105  Q
    ||||||||| | |||||| |||| |||  |||||||||||| |||||||||| |||| ||| |||||||||| | ||||||| |||| |  || | ||||    
T  40122888 agtacttatgtataagctatttcaataacaaaagataaaataaagtcaaactgttttcata-aagctataagttgtttttataagctatcctaaaaagtt 40122790  T
Q  106 catagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
     || |||||||||| |||||||||||| || |||||||||  |||||||||||||| | |||||||    
T  40122789 aatggaaataagctaaaaacaacttatagagatgtcataaactattttcataagctattccaaata 40122724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 37273172 - 37273231
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||| | |||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  37273172 gaaataagttgaaaacaacttatggacatgtcataagttgtttccataagctctcccaaa 37273231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 36646427 - 36646353
Alignment:
Q  97 tagagagttcatagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    ||||||||| ||||||||||| | |||||| |||||||||||| |||||||  ||| ||||||||||||||||||    
T  36646427 tagagagtttatagaaataagatgaaaacagcttatggacatgccataagtggtttccataagctctcccaaata 36646353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 1816544 - 1816668
Alignment:
Q  34 ataaaagataaaatcaagtcaaactatttttatataagctataagct-tttttatcagctgtaatagagagttcatagaaataagcttaaaacaacttat 132  Q
    |||||||||||||| |||||||||| ||||| |||||| |||||| | |||| || |||| || | ||||| | ||  ||||||||| |||||| | |||    
T  1816544 ataaaagataaaataaagtcaaactgtttttgtataagatataagttgttttcataagctatactggagagcttatcaaaataagctgaaaacagcctat 1816643  T
Q  133 ggacatgtcataagttattttcata 157  Q
    | | |||||||||||||||||||||    
T  1816644 gaaaatgtcataagttattttcata 1816668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 27290943 - 27290880
Alignment:
Q  100 agagttcatagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctct 163  Q
    ||||||||| |||||||||| |||||| ||||||| ||||||||||| | ||||||||||||||    
T  27290943 agagttcatggaaataagctgaaaacagcttatgggcatgtcataagctgttttcataagctct 27290880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 40880979 - 40880921
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||| ||||||||||||| || ||||||||||||| ||||||||||||||| ||||    
T  40880979 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaa 40880921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 61 - 169
Target Start/End: Original strand, 43115044 - 43115153
Alignment:
Q  61 ttttatataagctataagctttttt-atcagctgtaatagagagttcatagaaataagcttaaaacaacttatggacatgtcataagttattttcataag 159  Q
    |||||||||||||||||| | |||| || | || | || ||||| | || |||||||||| ||||||| |||||||||||||||||||| ||| |||||     
T  43115044 ttttatataagctataagttgttttcatgaactatcattgagagcttatggaaataagctgaaaacaagttatggacatgtcataagttgtttccataaa 43115143  T
Q  160 ctctcccaaa 169  Q
    |||| |||||    
T  43115144 ctcttccaaa 43115153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 107 - 171
Target Start/End: Original strand, 1810012 - 1810076
Alignment:
Q  107 atagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    ||||||||||||  ||||||||| |||||||||||||||||| ||| | ||||||||| ||||||    
T  1810012 atagaaataagcagaaaacaactcatggacatgtcataagttgtttccgtaagctctctcaaata 1810076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 3015874 - 3015822
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctct 163  Q
    ||||||| | |||||| ||||||||||||||||||||| ||||||||||||||    
T  3015874 aaataagatgaaaacatcttatggacatgtcataagttgttttcataagctct 3015822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 36200124 - 36200172
Alignment:
Q  100 agagttcatagaaataagcttaaaacaacttatggacatgtcataagtt 148  Q
    |||| |||| |||||||||| ||||||||||||||||||||||||||||    
T  36200124 agagctcatggaaataagctgaaaacaacttatggacatgtcataagtt 36200172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 41724251 - 41724299
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataag 159  Q
    ||||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  41724251 aaataagctgaaaacaacttatggacatgtcataagttgtttccataag 41724299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 14598573 - 14598526
Alignment:
Q  122 aaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||||||||||||||||||||||||| ||||| ||| ||||||    
T  14598573 aaacaacttatggacatgtcataagttatttccataaactcccccaaa 14598526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 38462220 - 38462354
Alignment:
Q  13 ttatttttaagctgtttctatat-aaaagataaaatcaagtcaaactatttttatataagctataagct-tttttatcagctgtaatagagagttcatag 110  Q
    |||||| |||||| ||||||||  |||||||||||| |||||||||| |||| ||||| ||||||| || |||| || |||| |   ||| || | || |    
T  38462220 ttatttataagctatttctataccaaaagataaaataaagtcaaactgttttcatatatgctataaactgttttcataagctatccaagatagcttatgg 38462319  T
Q  111 aaataagcttaaaacaacttatggacatgtcataa 145  Q
    ||||||||| |||||||||||||| || |||||||    
T  38462320 aaataagctgaaaacaacttatggtcaagtcataa 38462354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 51130789 - 51130847
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||| ||| ||||||||||||||||||||  |  ||||||||||||||||||||    
T  51130789 aaataagctgaaagcaacttatggacatgtcatacatggttttcataagctctcccaaa 51130847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 2081115 - 2081054
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    |||||||||| ||||||||||| |||  |||||| || ||||| ||||||||||||||||||    
T  2081115 gaaataagctgaaaacaacttaaggatgtgtcattagctatttccataagctctcccaaata 2081054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 24624250 - 24624307
Alignment:
Q  112 aataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||| ||||||  |||||||||||||||||| | |||||||||||||| |||||    
T  24624250 aataagctgaaaacagtttatggacatgtcataagctgttttcataagctcttccaaa 24624307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 146
Target Start/End: Complemental strand, 30923943 - 30923894
Alignment:
Q  97 tagagagttcatagaaataagcttaaaacaacttatggacatgtcataag 146  Q
    ||||||||| ||||||||||||| |||||| ||||| |||||||||||||    
T  30923943 tagagagtttatagaaataagctgaaaacagcttatagacatgtcataag 30923894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 1823944 - 1823896
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataa 158  Q
    |||||||||| |||||||||||||||||| |||| ||||||||| ||||    
T  1823944 gaaataagctaaaaacaacttatggacatatcattagttatttttataa 1823896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 121 - 169
Target Start/End: Original strand, 24281096 - 24281144
Alignment:
Q  121 aaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||||||||| || ||||||||| ||||||||||||||| ||||    
T  24281096 aaaacaacttatggagatatcataagttgttttcataagctctctcaaa 24281144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 113 - 169
Target Start/End: Complemental strand, 42817251 - 42817195
Alignment:
Q  113 ataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||| |||||||||||||||||||||||| | | ||| ||||||||||| ||||    
T  42817251 ataagctgaaaacaacttatggacatgtcatatgctgtttccataagctctctcaaa 42817195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 48049014 - 48048962
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctc 162  Q
    |||||||||| |||||| |||||||||||||||| ||||  ||||||||||||    
T  48049014 gaaataagctgaaaacagcttatggacatgtcatgagttggtttcataagctc 48048962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 146
Target Start/End: Complemental strand, 12923356 - 12923321
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataag 146  Q
    ||||||||| ||||||||||||||||||||||||||    
T  12923356 aaataagctgaaaacaacttatggacatgtcataag 12923321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 164
Target Start/End: Original strand, 23785220 - 23785347
Alignment:
Q  38 aagataaaatcaagtcaaactatttttatataagctataagct-tttttatcagctgtaatagagagttcatagaaataagcttaaaacaacttatggac 136  Q
    |||||||||| |||||||||| | || ||||||||||||| || |||| |  |||| | || ||||| | || |||| ||||| ||||||||||||||||    
T  23785220 aagataaaataaagtcaaactgtattcatataagctataaactgttttcacaagctctcatggagagcttatggaaacaagctgaaaacaacttatggac 23785319  T
Q  137 atgtcataagttattttcataagctctc 164  Q
    | | |||||| | ||| |||| ||||||    
T  23785320 acgccataagctgtttccatatgctctc 23785347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 43116552 - 43116493
Alignment:
Q  20 taagctgtttctatat-aaaagataaaatcaagtcaaactatttttatataagctataag 78  Q
    |||||| ||||||||  ||||||||||||||| |||||| ||||| ||||||||||||||    
T  43116552 taagctatttctataacaaaagataaaatcaaatcaaacaattttcatataagctataag 43116493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 146
Target Start/End: Complemental strand, 54180811 - 54180776
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataag 146  Q
    ||||||||| ||||||||||||||||||||||||||    
T  54180811 aaataagctaaaaacaacttatggacatgtcataag 54180776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 1217821 - 1217771
Alignment:
Q  121 aaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    |||||||||||||||||||||||||| | ||| | |||||||| |||||||    
T  1217821 aaaacaacttatggacatgtcataagctgtttccgtaagctcttccaaata 1217771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 163
Target Start/End: Complemental strand, 11039368 - 11039318
Alignment:
Q  113 ataagcttaaaacaacttatggacatgtcataagttattttcataagctct 163  Q
    ||||||| |||||||||||||||||||||||||  | ||| ||||||||||    
T  11039368 ataagctgaaaacaacttatggacatgtcataatatgtttccataagctct 11039318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 22214691 - 22214641
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagc 160  Q
    |||||||||| |||||| ||||||||||||||| | ||| |||||||||||    
T  22214691 gaaataagctgaaaacagcttatggacatgtcaaatgtttttttcataagc 22214641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 31337508 - 31337466
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataag 78  Q
    |||||||||||| |||||||||| |||||||||||| ||||||    
T  31337508 aaaagataaaataaagtcaaactgtttttatataagttataag 31337466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 163
Target Start/End: Original strand, 37155050 - 37155092
Alignment:
Q  121 aaaacaacttatggacatgtcataagttattttcataagctct 163  Q
    |||||||||||||||||||| ||||||||||| ||||| ||||    
T  37155050 aaaacaacttatggacatgtaataagttatttccataaactct 37155092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 163
Target Start/End: Original strand, 37200405 - 37200447
Alignment:
Q  121 aaaacaacttatggacatgtcataagttattttcataagctct 163  Q
    |||||||||||||||||||| ||||||||||| ||||| ||||    
T  37200405 aaaacaacttatggacatgtaataagttatttccataaactct 37200447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 23952213 - 23952164
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataagctttttt 85  Q
    |||||||||||| |||||||| ||||||| |||||||| |||||| ||||    
T  23952213 aaaagataaaattaagtcaaagtatttttgtataagctgtaagctgtttt 23952164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 25183001 - 25182960
Alignment:
Q  128 cttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||| |||||||||||| ||||||||||||||| ||||    
T  25183001 cttatggatatgtcataagttgttttcataagctctctcaaa 25182960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 31010426 - 31010491
Alignment:
Q  96 atagagagttcatagaaataagcttaaaacaacttatggacatgtcataagttattttcataagct 161  Q
    |||||||| | || ||| |||||| |||||| ||||||||||||||||||||| |||  |||||||    
T  31010426 atagagagcttatggaattaagctgaaaacagcttatggacatgtcataagttgtttctataagct 31010491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 97 - 146
Target Start/End: Original strand, 31403172 - 31403221
Alignment:
Q  97 tagagagttcatagaaataagcttaaaacaacttatggacatgtcataag 146  Q
    |||||||||||| | |||||||| |||||| |||||||||||| ||||||    
T  31403172 tagagagttcatggtaataagctgaaaacagcttatggacatgacataag 31403221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 34760904 - 34760945
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataa 77  Q
    |||||||||||| |||| ||||||| ||||||||||||||||    
T  34760904 aaaagataaaataaagttaaactatgtttatataagctataa 34760945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 53848107 - 53848034
Alignment:
Q  98 agagagttcatagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    |||||| | ||||||||||||  |||||| ||||||||||||||| |||| ||||  | |||||||| ||||||    
T  53848107 agagagcttatagaaataagccgaaaacagcttatggacatgtcacaagtcatttcaaaaagctctctcaaata 53848034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 1395617 - 1395673
Alignment:
Q  20 taagctgtttctatat-aaaagataaaatcaagtcaaactatttttatataagctat 75  Q
    |||||| ||||||||  |||||||||||| |||||||| |||||| |||||||||||    
T  1395617 taagctatttctataacaaaagataaaataaagtcaaattattttcatataagctat 1395673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 2201092 - 2201140
Alignment:
Q  37 aaagataaaatcaagtcaaactatttttatataagctataagctttttt 85  Q
    ||||||||||  |||||||||| |||| |||||||||||||||| ||||    
T  2201092 aaagataaaacaaagtcaaactgttttcatataagctataagctgtttt 2201140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 169
Target Start/End: Original strand, 31403043 - 31403115
Alignment:
Q  97 tagagagttcatagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||| ||  || ||||||||||| | ||||| ||||||| ||||||| ||| ||||||||||| ||||    
T  31403043 tagagagtttatctaactaagcttaaaataccttatagacatgtaataagttgtttccataagctctctcaaa 31403115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 169
Target Start/End: Complemental strand, 34707517 - 34707469
Alignment:
Q  121 aaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||||||||||||||| ||||| |||||| ||| |||| ||||    
T  34707517 aaaacaacttatggacatgtcacaagttgttttcaaaagttctctcaaa 34707469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 78
Target Start/End: Complemental strand, 35246684 - 35246656
Alignment:
Q  50 agtcaaactatttttatataagctataag 78  Q
    |||||||||||||||||||||||||||||    
T  35246684 agtcaaactatttttatataagctataag 35246656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 146
Target Start/End: Original strand, 37825160 - 37825196
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataag 146  Q
    ||||||| || ||||||||||||||||||||||||||    
T  37825160 gaaataacctgaaaacaacttatggacatgtcataag 37825196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 39602241 - 39602181
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    ||||||| | ||||||| ||||| |||||||||||| | | |||||||||||| |||||||    
T  39602241 aaataagttgaaaacaatttatgaacatgtcataagctgtcttcataagctcttccaaata 39602181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 42745076 - 42745124
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataa 158  Q
    |||||||| | ||||||||||||| |||||||||||||| ||| |||||    
T  42745076 gaaataagatgaaaacaacttatgaacatgtcataagttgtttacataa 42745124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 47249517 - 47249469
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataag 159  Q
    ||||||||  ||||||||||||| |||||||||||||  ||||||||||    
T  47249517 aaataagccaaaaacaacttatgaacatgtcataagtggttttcataag 47249469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 48397607 - 48397651
Alignment:
Q  34 ataaaagataaaatcaagtcaaactatttttatataagctataag 78  Q
    |||||||||||||| |||||||| | ||||||| |||||||||||    
T  48397607 ataaaagataaaataaagtcaaattgtttttatttaagctataag 48397651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 49587040 - 49586984
Alignment:
Q  20 taagctgtttctatat-aaaagataaaatcaagtcaaactatttttatataagctat 75  Q
    |||||| ||||||||  |||||||||||| |||||||||| |||| |||||||||||    
T  49587040 taagctatttctataacaaaagataaaataaagtcaaactgttttcatataagctat 49586984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 36 - 67
Target Start/End: Complemental strand, 659930 - 659899
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttata 67  Q
    |||||||||||| |||||||||||||||||||    
T  659930 aaaagataaaataaagtcaaactatttttata 659899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 8007819 - 8007756
Alignment:
Q  20 taagctgtttctatat-aaaagataaaatcaagtcaaactatttttatataagctataagcttt 82  Q
    |||||||||||||||  |||||||||| | |||||||||| || | ||||||||||||| ||||    
T  8007819 taagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataatcttt 8007756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 121 - 164
Target Start/End: Original strand, 23314497 - 23314540
Alignment:
Q  121 aaaacaacttatggacatgtcataagttattttcataagctctc 164  Q
    |||| |||||||| |||||||||||| |||||||| ||||||||    
T  23314497 aaaataacttatgaacatgtcataagctattttcaaaagctctc 23314540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 111 - 146
Target Start/End: Original strand, 24785244 - 24785279
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataag 146  Q
    ||||||||| ||||||||||||| ||||||||||||    
T  24785244 aaataagctaaaaacaacttatgaacatgtcataag 24785279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 39 - 78
Target Start/End: Original strand, 28779322 - 28779361
Alignment:
Q  39 agataaaatcaagtcaaactatttttatataagctataag 78  Q
    |||| |||| ||||||||||||||| ||||||||||||||    
T  28779322 agatgaaataaagtcaaactattttcatataagctataag 28779361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 121 - 156
Target Start/End: Original strand, 30750049 - 30750084
Alignment:
Q  121 aaaacaacttatggacatgtcataagttattttcat 156  Q
    |||||| ||||||||||||||||||||| |||||||    
T  30750049 aaaacagcttatggacatgtcataagttgttttcat 30750084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 39971335 - 39971390
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcc 165  Q
    |||||||||| ||||||   |||||||||  |||||||||||||||||| ||||||    
T  39971335 gaaataagctgaaaacatgatatggacattccataagttattttcataaactctcc 39971390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 145
Target Start/End: Complemental strand, 45432971 - 45432936
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataa 145  Q
    |||||||||| ||||||||||||| |||||||||||    
T  45432971 gaaataagctgaaaacaacttatgaacatgtcataa 45432936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 4e-18; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 36 - 169
Target Start/End: Complemental strand, 28586873 - 28586739
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataagcttttttatc-agctgtaatagagagttcatagaaataagcttaaaacaacttatgg 134  Q
    |||||||||||| |||||||||| |||| ||||||  |||||||| ||||  | |||| |  ||||||| | || |||||||||| |||||| |||| ||    
T  28586873 aaaagataaaataaagtcaaactgttttcatataaattataagctgttttgacgagctatcctagagagcttatcgaaataagctgaaaacagcttacgg 28586774  T
Q  135 acatgtcataagttattttcataagctctcccaaa 169  Q
    | |||||||||| ||||| ||||||||||||||||    
T  28586773 atatgtcataagctatttccataagctctcccaaa 28586739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 169
Target Start/End: Original strand, 16889698 - 16889832
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataagct-tttttatcagctgtaatagagagttcatagaaataagcttaaaacaacttatgg 134  Q
    |||||||||| | |||||||||| |||||||| |||||||||||| |||| || |||| |  ||||||||| || ||||||| || |||||||||||| |    
T  16889698 aaaagataaacttaagtcaaactgtttttatagaagctataagctgttttcataagctatgctagagagtttatggaaataatctgaaaacaacttatag 16889797  T
Q  135 acatgtcataagttattttcataagctctcccaaa 169  Q
    ||||   ||||| | ||||||||| |||| |||||    
T  16889798 acatagtataagctgttttcataatctcttccaaa 16889832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 36 - 164
Target Start/End: Original strand, 14295469 - 14295598
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataagct-tttttatcagctgtaatagagagttcatagaaataagcttaaaacaacttatgg 134  Q
    |||||||||||| |||||||||| |||| |||||||||||||||| ||||  | |||| |  | ||||| |  ||||| |||||| |||||| ||||| |    
T  14295469 aaaagataaaataaagtcaaactgttttcatataagctataagctgttttcgtaagctatcctggagagcttttagaagtaagctgaaaacagcttatcg 14295568  T
Q  135 acatgtcataagttattttcataagctctc 164  Q
    |||| ||||||| | |||||||||||||||    
T  14295569 acatatcataagctgttttcataagctctc 14295598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 121 - 168
Target Start/End: Original strand, 29363057 - 29363104
Alignment:
Q  121 aaaacaacttatggacatgtcataagttattttcataagctctcccaa 168  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||    
T  29363057 aaaacaacttatgggcatgtcataagttgttttcataagctctcccaa 29363104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 171
Target Start/End: Complemental strand, 10272540 - 10272402
Alignment:
Q  34 ataaaagataaaatcaagtcaaactatttttatataagctataagctttttt-atcagctgtaatagagagttcatagaaataagcttaaaacaacttat 132  Q
    |||||||||||||| |||||||| | ||||  ||||||||||||| | |||| || |||  |  | ||||||| ||  ||||||||| |||||||||||     
T  10272540 ataaaagataaaattaagtcaaattgttttcgtataagctataagttgttttcataagccatcttggagagtttatgaaaataagctgaaaacaacttac 10272441  T
Q  133 ggacatgtcataagttattttcataagctctcccaaata 171  Q
     ||||||||||||||| |||  |||||| ||||||||||    
T  10272440 agacatgtcataagttgtttctataagcactcccaaata 10272402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 169
Target Start/End: Original strand, 32172616 - 32172750
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataagctttttt-atcagctgtaatagagagttcatagaaataagcttaaaacaacttatgg 134  Q
    |||||||||||| |||||||  | |||  |||||||||||||||| |||| || |||| | ||  |||  | || |||||||||| ||||   |||||||    
T  32172616 aaaagataaaatgaagtcaagttgtttacatataagctataagctgttttcataagctatcatgaagaactaatggaaataagctgaaaatggcttatgg 32172715  T
Q  135 acatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||||||| ||| ||||||||||||||||    
T  32172716 acatgtcataagttgtttccataagctctcccaaa 32172750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 6109521 - 6109582
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    |||||||||| |||||||||||||||||| |||||| || ||| |||||||||||| |||||    
T  6109521 gaaataagctgaaaacaacttatggacatatcataatttttttccataagctctccaaaata 6109582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 126 - 171
Target Start/End: Original strand, 10152388 - 10152433
Alignment:
Q  126 aacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||    
T  10152388 aacttatggacatgtcataagttgttttcataagctctccaaaata 10152433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 44 - 164
Target Start/End: Complemental strand, 18704135 - 18704015
Alignment:
Q  44 aaatcaagtcaaactatttttatataagctataagctttttt-atcagctgtaatagagagttcatagaaataagcttaaaacaacttatggacatgtca 142  Q
    |||| ||||||| |||||||||||||||||||||| | |||| || |||| | | | |||  | || |||||||||| |||||||||||| ||||||| |    
T  18704135 aaataaagtcaagctatttttatataagctataagttgttttcataagctattacaaagatcttatggaaataagctgaaaacaacttatagacatgtta 18704036  T
Q  143 taagttattttcataagctctc 164  Q
    ||||||  ||||||||||||||    
T  18704035 taagtt-gtttcataagctctc 18704015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 30269764 - 30269707
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaa 168  Q
    ||||||||| |||||||||||||| ||||| ||||||| |||| ||||||||||||||    
T  30269764 aaataagctaaaaacaacttatgggcatgttataagttgttttaataagctctcccaa 30269707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 34 - 169
Target Start/End: Complemental strand, 37526308 - 37526172
Alignment:
Q  34 ataaaagataaaatcaagtcaaactatttttatataagctataagctttttt-atcagctgtaatagagagttcatagaaataagcttaaaacaacttat 132  Q
    ||||||||||||||||| |||||   |||| |||||||||||||| | |||| || || |||  | ||||| | || |||||||||| |||||| |||||    
T  37526308 ataaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataagttgttctggagagcttatggaaataagctgaaaacagcttat 37526209  T
Q  133 ggacatgtcataagttattttcataagctctcccaaa 169  Q
      |||||||||| ||| | ||||||||||||| ||||    
T  37526208 taacatgtcataggttgtattcataagctctctcaaa 37526172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 35963279 - 35963334
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcc 165  Q
    |||||||||| |||||||||||||||||||||||| | ||||| |||||| |||||    
T  35963279 gaaataagctgaaaacaacttatggacatgtcatacgctatttccataagttctcc 35963334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 161
Target Start/End: Complemental strand, 37794730 - 37794679
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagct 161  Q
    |||||||||| |||||| |||||| |||||||||||||| ||||||||||||    
T  37794730 gaaataagctcaaaacagcttatgaacatgtcataagttgttttcataagct 37794679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 38728440 - 38728499
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||| |||||| |||| |  ||||||||||| ||||||||||||||||||||||    
T  38728440 gaaataagctgaaaacagcttaggagcatgtcataagctattttcataagctctcccaaa 38728499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 499774 - 499704
Alignment:
Q  99 gagagttcatagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||| || |||||||||| |||||||||| |  |||||||||||| | |||||||||| |||||||||    
T  499774 gagagtttatggaaataagctgaaaacaacttgttaacatgtcataagctgttttcataagttctcccaaa 499704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 2092566 - 2092516
Alignment:
Q  121 aaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    ||||||||||||||||||| |||||||| |||  |||||||||||||||||    
T  2092566 aaaacaacttatggacatgccataagttgtttcaataagctctcccaaata 2092516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 17258914 - 17258856
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||| |||||| |||||| |||||||||||| |||||||||| | |||||||||    
T  17258914 aaataagctgaaaacagcttatgaacatgtcataagctattttcataggttctcccaaa 17258856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 35135769 - 35135727
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataag 78  Q
    |||||||||||| ||||||||||||||| ||||||||||||||    
T  35135769 aaaagataaaataaagtcaaactattttcatataagctataag 35135727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 35960450 - 35960512
Alignment:
Q  109 agaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    ||||||||||| |||||| |||||||||||||| ||||||  || ||||||||||| ||||||    
T  35960450 agaaataagctaaaaacatcttatggacatgtcgtaagttgcttccataagctctctcaaata 35960512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 5531083 - 5531124
Alignment:
Q  121 aaaacaacttatggacatgtcataagttattttcataagctc 162  Q
    |||||||||||||||||| ||||||||| |||||||||||||    
T  5531083 aaaacaacttatggacatatcataagttgttttcataagctc 5531124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 13604880 - 13604827
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctc 164  Q
    ||||||| | |||||||| ||||||||||||||||| | |||||||||||||||    
T  13604880 aaataagttgaaaacaacgtatggacatgtcataagctgttttcataagctctc 13604827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 24084859 - 24084908
Alignment:
Q  34 ataaaagataaaatcaagtcaaactatttttatataagctataagctttt 83  Q
    ||||| ||||||||||||||||||||||||||| ||| ||| ||||||||    
T  24084859 ataaacgataaaatcaagtcaaactatttttatgtaacctaaaagctttt 24084908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 32969242 - 32969185
Alignment:
Q  19 ttaagctgtttctatat-aaaagataaaatcaagtcaaactatttttatataagctat 75  Q
    ||||| ||||||||||  |||||||||||| |||||||| ||||||||||||||||||    
T  32969242 ttaagttgtttctataacaaaagataaaataaagtcaaattatttttatataagctat 32969185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 37063107 - 37063050
Alignment:
Q  112 aataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||| |||||||||||||||| ||| |||||||| | |||| |||||||||||||||    
T  37063107 aataaacttaaaacaacttatgtacaggtcataaggttttttgataagctctcccaaa 37063050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 38047893 - 38047852
Alignment:
Q  128 cttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||||||||||||||| ||| ||||||||||||||||    
T  38047893 cttatggacatgtcataagttgtttccataagctctcccaaa 38047852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 18700427 - 18700475
Alignment:
Q  115 aagcttaaaacaacttatggacatgtcataagttattttcataagctct 163  Q
    ||||| |||||||||||| ||||||||||||||| ||| ||||||||||    
T  18700427 aagctgaaaacaacttatagacatgtcataagttgtttccataagctct 18700475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 33234329 - 33234373
Alignment:
Q  41 ataaaatcaagtcaaactatttttatataagctataagctttttt 85  Q
    ||||||| |||||||||| ||||||||||||||||||||| ||||    
T  33234329 ataaaatgaagtcaaactgtttttatataagctataagctatttt 33234373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 41957482 - 41957422
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    ||||||| | |||||||||||||||||||||||||| | ||| | |||||||| |||||||    
T  41957482 aaataagatgaaaacaacttatggacatgtcataagctgtttccgtaagctcttccaaata 41957422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 985651 - 985706
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcc 165  Q
    |||||||||| |||||  ||| ||||||||||||||||||||| ||||| ||||||    
T  985651 gaaataagctgaaaaccgcttgtggacatgtcataagttatttgcataatctctcc 985706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 113 - 160
Target Start/End: Complemental strand, 2569724 - 2569677
Alignment:
Q  113 ataagcttaaaacaacttatggacatgtcataagttattttcataagc 160  Q
    |||| ||||||||| ||||||||||||||||||| ||||| |||||||    
T  2569724 ataaacttaaaacagcttatggacatgtcataagctatttccataagc 2569677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 4619745 - 4619804
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||| | ||| || |||||| ||||||||| |||| ||||||||||||||||||||    
T  4619745 gaaataaggtgaaaccagcttatgaacatgtcattagttgttttcataagctctcccaaa 4619804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 7808544 - 7808603
Alignment:
Q  111 aaataagcttaaaacaacttatggaca-tgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||| |||||| |||||| ||| ||| ||||| ||||||||||||||||||||||    
T  7808544 aaataagctgaaaacagcttatgaacaatgttataagctattttcataagctctcccaaa 7808603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 10907416 - 10907475
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||  |||||| ||||| |||||| |||||||| |||||||||||||| |||||    
T  10907416 gaaataagccgaaaacagcttattgacatgacataagttgttttcataagctcttccaaa 10907475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 11297013 - 11296970
Alignment:
Q  128 cttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    |||||||||| |||||||||| |||||||||||||| |||||||    
T  11297013 cttatggacaggtcataagttgttttcataagctcttccaaata 11296970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 14980559 - 14980606
Alignment:
Q  122 aaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||||| ||||||||||||| ||||| |||||||||| ||||    
T  14980559 aaacaacttatgtacatgtcataagtcatttttataagctctctcaaa 14980606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 23160717 - 23160768
Alignment:
Q  120 taaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    |||||||||  |||||||||||||||||| |||||| ||| |||||||||||    
T  23160717 taaaacaacccatggacatgtcataagttgttttcaaaagatctcccaaata 23160768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 85
Target Start/End: Complemental strand, 32059694 - 32059647
Alignment:
Q  38 aagataaaatcaagtcaaactatttttatataagctataagctttttt 85  Q
    |||||||||| |||||||||| |||| |||||||||||||||| ||||    
T  32059694 aagataaaataaagtcaaactgttttcatataagctataagctgtttt 32059647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 37611247 - 37611188
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||| || |||||| |||||| |||||||| ||||| ||||||||||||||| ||||    
T  37611247 gaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaa 37611188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 37787977 - 37787918
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||| || |||||| |||||| |||||||| ||||| ||||||||||||||| ||||    
T  37787977 gaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaa 37787918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 1019497 - 1019443
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcc 165  Q
    ||||||| | |||||||||||||| |||| |||||| |||||| |||||||||||    
T  1019497 aaataagatgaaaacaacttatggccatggcataagctatttttataagctctcc 1019443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 11700409 - 11700355
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcc 165  Q
    |||||| || |||||| ||||||||||||||||||||| ||| ||||| ||||||    
T  11700409 aaataatctgaaaacagcttatggacatgtcataagttgtttccataaactctcc 11700355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 12460032 - 12459974
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||  |||||||| |||| |||||||||||||| |||||||| | |||||||||    
T  12460032 aaataagccaaaaacaacatatgaacatgtcataagttgttttcataggttctcccaaa 12459974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 29590672 - 29590610
Alignment:
Q  99 gagagttcatagaaataagcttaaaacaacttatggacatgtcataagttattttcataagct 161  Q
    ||||||| || |||||||| | ||||||||||||||||| |||||||||| | | ||||||||    
T  29590672 gagagtttatggaaataagttgaaaacaacttatggacaagtcataagttttgtccataagct 29590610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 34205290 - 34205340
Alignment:
Q  121 aaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    ||||||||||||| ||||| |||||||| ||| |||||||||||| |||||    
T  34205290 aaaacaacttatgaacatgacataagttgtttccataagctctccaaaata 34205340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 122 - 163
Target Start/End: Original strand, 11457148 - 11457189
Alignment:
Q  122 aaacaacttatggacatgtcataagttattttcataagctct 163  Q
    ||||| ||||||||||||||||||||| ||| ||||||||||    
T  11457148 aaacagcttatggacatgtcataagttgtttccataagctct 11457189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 12242738 - 12242681
Alignment:
Q  114 taagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    |||||| ||||||||| |||  ||||||||||||| ||| ||||||||||| ||||||    
T  12242738 taagctgaaaacaactaatgttcatgtcataagttttttccataagctctctcaaata 12242681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 13194839 - 13194892
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctct 163  Q
    |||||||||| |||||||| ||||||||||| ||||| | |||||| |||||||    
T  13194839 gaaataagctaaaaacaacatatggacatgttataagcttttttcacaagctct 13194892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 111 - 148
Target Start/End: Complemental strand, 32194110 - 32194073
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagtt 148  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  32194110 aaataagctgaaaacaacttatggaaatgtcataagtt 32194073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 169
Target Start/End: Complemental strand, 37690746 - 37690609
Alignment:
Q  34 ataaaagataaaatcaagtcaaactatttttatataagctataagctttttt-atca-gctgtaatagagagttcatagaaataagcttaaaacaactta 131  Q
    ||||||||||||||||| |||||   |||| |||||||||||||| | |||| || | | | | || ||||| | || |||||||||| |||||| ||||    
T  37690746 ataaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataaagttattatggagagcttatggaaataagctgaaaacagctta 37690647  T
Q  132 tggacatgtcataagttattttcataagctctcccaaa 169  Q
    |  |||||||||| ||| | ||||||||||||| ||||    
T  37690646 ttaacatgtcataggttgtattcataagctctctcaaa 37690609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 39750106 - 39750147
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataa 77  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  39750106 aaaagataaaataaagtcaaactattttcatataagttataa 39750147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 128 - 165
Target Start/End: Complemental strand, 40499740 - 40499703
Alignment:
Q  128 cttatggacatgtcataagttattttcataagctctcc 165  Q
    ||||||||||||||||||||| ||| ||||||||||||    
T  40499740 cttatggacatgtcataagttgtttccataagctctcc 40499703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 583878 - 583838
Alignment:
Q  38 aagataaaatcaagtcaaactatttttatataagctataag 78  Q
    |||||||||| |||||||||| |||| ||||||||||||||    
T  583878 aagataaaataaagtcaaactgttttcatataagctataag 583838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 146
Target Start/End: Original strand, 1899192 - 1899228
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataag 146  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  1899192 gaaataagctgaaaacaacttatgcacatgtcataag 1899228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 8089975 - 8090035
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    ||||||||| |||||| |||| | | || ||||||||| ||||||||||||||| ||||||    
T  8089975 aaataagctgaaaacagcttaggaatatatcataagttgttttcataagctctctcaaata 8090035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 146
Target Start/End: Complemental strand, 18543229 - 18543193
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataag 146  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  18543229 gaaataagctgaaaacaactcatggacatgtcataag 18543193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 34205200 - 34205244
Alignment:
Q  34 ataaaagataaaatcaagtcaaactatttttatataagctataag 78  Q
    ||||| |||||| | |||||||| |||||||||||||||||||||    
T  34205200 ataaaggataaagtaaagtcaaattatttttatataagctataag 34205244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 169
Target Start/End: Complemental strand, 38766566 - 38766518
Alignment:
Q  121 aaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||||||||| ||||||||||| ||| |||||| ||| |||||    
T  38766566 aaaacaacttatggacgtgtcataagttgtttccataagttcttccaaa 38766518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 129 - 164
Target Start/End: Original strand, 11406251 - 11406286
Alignment:
Q  129 ttatggacatgtcataagttattttcataagctctc 164  Q
    ||||| |||| |||||||||||||||||||||||||    
T  11406251 ttatgaacatatcataagttattttcataagctctc 11406286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 111 - 170
Target Start/End: Original strand, 11707094 - 11707153
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaat 170  Q
    ||||||||| ||||||||||||  |||||||||||  |||||| ||||| |||| |||||    
T  11707094 aaataagctgaaaacaacttataaacatgtcataatctattttgataagttctctcaaat 11707153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 16457645 - 16457586
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||| ||||||||||||| |||||||| || || ||| |||| ||||| |||||    
T  16457645 gaaataagctgaaaacaacttatgaacatgtcacaatttgtttccatatgctcttccaaa 16457586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 146
Target Start/End: Complemental strand, 17369474 - 17369435
Alignment:
Q  107 atagaaataagcttaaaacaacttatggacatgtcataag 146  Q
    |||||||||| || |||||||||||| |||||||||||||    
T  17369474 atagaaataatctgaaaacaacttatagacatgtcataag 17369435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 138 - 169
Target Start/End: Complemental strand, 19113123 - 19113092
Alignment:
Q  138 tgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||||||||||| ||||||||||||||    
T  19113123 tgtcataagttattttcgtaagctctcccaaa 19113092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 30217120 - 30217174
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcc 165  Q
    ||||||| | |||||||||||||||||||| |||||| || || ||||||||||||    
T  30217120 gaaataaacctaaaacaacttatggacatg-cataagataattccataagctctcc 30217174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 37063181 - 37063146
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataag 71  Q
    |||||||||||| ||||||||||||||| |||||||    
T  37063181 aaaagataaaataaagtcaaactattttcatataag 37063146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 38338362 - 38338416
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcc 165  Q
    |||||||||| ||| |||||||||||||||||||||| | ||| | ||||||||||    
T  38338362 gaaataagct-aaaccaacttatggacatgtcataagctgtttccgtaagctctcc 38338416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 39941785 - 39941848
Alignment:
Q  18 tttaagctgtttctatat-aaaagataaaatcaagtcaaactatttttatataagctataagct 80  Q
    |||||||||||||||||  ||||  |||||| ||||||||||||||| |  |||||||||||||    
T  39941785 tttaagctgtttctataagaaaatttaaaataaagtcaaactattttcaattaagctataagct 39941848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 42646947 - 42646990
Alignment:
Q  128 cttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    |||||| |||||||||||| |||||||||||| ||| |||||||    
T  42646947 cttatgaacatgtcataagctattttcataagttcttccaaata 42646990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 148
Target Start/End: Complemental strand, 33526067 - 33525961
Alignment:
Q  43 aaaatcaagtcaaactatttttatataagctataagctttttt-atcagctgtaatagagagttcatagaaataagcttaaaacaacttatggacatgtc 141  Q
    ||||| ||||||||||||||| ||||| |  |||||||||||| || |||| || ||||  ||| ||||||||||||| ||| ||||||||||||||||     
T  33526067 aaaataaagtcaaactattttcatatatgtaataagcttttttcataagctatactagaaggtttatagaaataagctgaaaccaacttatggacatgtt 33525968  T
Q  142 ataagtt 148  Q
    |||||||    
T  33525967 ataagtt 33525961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 43065482 - 43065428
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctc 164  Q
    |||||||||| ||||||| |||||||||||||||||||| |||||||||||||||    
T  43065482 gaaataagctgaaaacaatttatggacatgtcataagttgttttcataagctctc 43065428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 38 - 144
Target Start/End: Complemental strand, 7103588 - 7103480
Alignment:
Q  38 aagataaaatcaagtcaaactatttttatataagctataagctttttt--atcagctgtaatagagagttcatagaaataagcttaaaacaacttatgga 135  Q
    |||||||||| |||||||||| |||| |||||||||||||||| ||||  || |||| |  |||||||||  |  ||||||||| |||||||||||||||    
T  7103588 aagataaaataaagtcaaactgttttaatataagctataagctgtttttcataagctatcttagagagtttgtgaaaataagctaaaaacaacttatgga 7103489  T
Q  136 catgtcata 144  Q
     ||||||||    
T  7103488 tatgtcata 7103480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 1742139 - 1742003
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataagctttttt-atcagctgtaatagagagttcatagaaataagcttaaaacaacttatgg 134  Q
    |||| ||||||| |||||||||| ||| |||||||| |||||||| |||| || | || | ||  |||||| || |||||||| | || | | ||||||     
T  1742139 aaaatataaaatgaagtcaaactctttatatataagatataagctgttttcataatctatcatgaagagtttatggaaataagttgaagatagcttatgc 1742040  T
Q  135 acatgtcataagttattttcataagctctcccaaata 171  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  1742039 acatgtcataagttgtttccataagctctcccaaata 1742003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 110 - 161
Target Start/End: Original strand, 10285898 - 10285949
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagct 161  Q
    |||||||| | |||||| ||||||||||||||||||||||||||||||||||    
T  10285898 gaaataagttgaaaacagcttatggacatgtcataagttattttcataagct 10285949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 15120222 - 15120280
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||||||||| || ||| |||||||||||||| ||| ||||||||||||||||    
T  15120222 aaataagcttaaaacagctaatgaacatgtcataagttgtttccataagctctcccaaa 15120280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 44606141 - 44606083
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||| |||| |||||||||||||||||||||||||||| |||||||||| ||| |||||    
T  44606141 aaatcagctgaaaacaacttatggacatgtcataagttgttttcataagttcttccaaa 44606083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 10143135 - 10143184
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataagctttttt 85  Q
    |||||||||||| |||||||||| ||||||||||||||||||| ||||||    
T  10143135 aaaagataaaattaagtcaaactgtttttatataagctataagttttttt 10143184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 107 - 171
Target Start/End: Original strand, 29430793 - 29430857
Alignment:
Q  107 atagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    ||||| ||||||||||| || || |||||||||||||||| |||||||||||| ||| |||||||    
T  29430793 atagagataagcttaaagcagctaatggacatgtcataagctattttcataagttcttccaaata 29430857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 39 - 146
Target Start/End: Complemental strand, 44458442 - 44458334
Alignment:
Q  39 agataaaatcaagtcaaactatttttatataagctataagcttttt-tatcagctgtaatagagagttcatagaaataagcttaaaacaacttatggaca 137  Q
    ||||||| | ||||||| ||||||| || ||  ||||||||| ||| ||| |||| | || ||||||| ||| ||||||||| ||||||||||||||| |    
T  44458442 agataaactaaagtcaagctattttcatgtatactataagctgtttgtataagctatcatggagagtttatataaataagctaaaaacaacttatggata 44458343  T
Q  138 tgtcataag 146  Q
    |||||||||    
T  44458342 tgtcataag 44458334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 30538204 - 30538153
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctc 162  Q
    ||||||||| |||||||||||||||||||||||||||| |||  ||||||||    
T  30538204 aaataagctgaaaacaacttatggacatgtcataagttgtttctataagctc 30538153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 97 - 164
Target Start/End: Complemental strand, 35557170 - 35557103
Alignment:
Q  97 tagagagttcatagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctc 164  Q
    ||||||||| ||| ||||||||  |||||| |||||| |||||||||||| |||||||| ||||||||    
T  35557170 tagagagtttatataaataagcagaaaacagcttatgaacatgtcataagctattttcacaagctctc 35557103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 1494477 - 1494419
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||| ||||||  |||||||||||||||||| | ||||||||||||||| ||||    
T  1494477 aaataagctaaaaacagtttatggacatgtcataagctgttttcataagctctctcaaa 1494419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 6 - 159
Target Start/End: Complemental strand, 6993861 - 6993707
Alignment:
Q  6 taagtacttatttttaagctgtttctatataaaagataaaatcaagtcaaactatttttatataagctataagct-tttttatcagctgtaatagagagt 104  Q
    ||||||||||| ||||| || |||||| | |||||||||||| | |||||| ||| || |||||||||||| | | |||| || |||| |  | |||||     
T  6993861 taagtacttatgtttaacctatttctacacaaaagataaaataaggtcaaattatattcatataagctataggttgttttcataagctatgcttgagagc 6993762  T
Q  105 tcatagaaataagcttaaaacaacttatggacatgtcataagttattttcataag 159  Q
    | ||  ||||||||| ||||  ||||||||||||| |||||| ||||| ||||||    
T  6993761 ttatgaaaataagctaaaaatgacttatggacatgccataagctatttacataag 6993707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 121 - 163
Target Start/End: Complemental strand, 9878703 - 9878661
Alignment:
Q  121 aaaacaacttatggacatgtcataagttattttcataagctct 163  Q
    |||||||||||||||||||||||||||| ||| ||||||||||    
T  9878703 aaaacaacttatggacatgtcataagttgtttccataagctct 9878661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 11063527 - 11063585
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||| |||||||||||||||||||||||||  | ||| |||||||||| |||||    
T  11063527 aaataagctaaaaacaacttatggacatgtcataatatgtttccataagctcttccaaa 11063585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 36 - 169
Target Start/End: Original strand, 28933787 - 28933920
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataagctttttt-atcagctgtaatagagagttcatagaaataagcttaaaacaacttatgg 134  Q
    ||||||||||||||| ||||| |||||| || |||| |||||  | |||| || |||| |  ||||||| | ||||||||||| | |||||| || |||     
T  28933787 aaaagataaaatcaaatcaaattattttcatttaagttataaattgttttcataagctatcctagagagctgatagaaataagttgaaaacagct-atga 28933885  T
Q  135 acatgtcataagttattttcataagctctcccaaa 169  Q
    ||||| |||||||| |||||||||||||| |||||    
T  28933886 acatgccataagttgttttcataagctcttccaaa 28933920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 148
Target Start/End: Complemental strand, 1939439 - 1939326
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatata-agctataagcttttttatcagctgtaatagagagttcatagaaataagcttaaaacaacttatgg 134  Q
    |||||||||||| |||| |||||||||| ||||  ||||||||   |||| || |||| || | ||||| | || |||||||| | |||||| |||||||    
T  1939439 aaaagataaaataaagtgaaactattttcatattgagctataactgttttcataagctatactggagagcttatggaaataagttgaaaacagcttatgg 1939340  T
Q  135 acatgtcataagtt 148  Q
    ||||||||||||||    
T  1939339 acatgtcataagtt 1939326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 9556294 - 9556335
Alignment:
Q  127 acttatggacatgtcataagttattttcataagctctcccaa 168  Q
    ||||||||||||||||| |||| |||||||||||||||||||    
T  9556294 acttatggacatgtcattagttgttttcataagctctcccaa 9556335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 13866852 - 13866901
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataagctttttt 85  Q
    |||||||||||| |||||||||| ||||||||||| ||||||||| ||||    
T  13866852 aaaagataaaattaagtcaaactgtttttatataatctataagctctttt 13866901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 31740065 - 31740024
Alignment:
Q  37 aaagataaaatcaagtcaaactatttttatataagctataag 78  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  31740065 aaagataaaataaagtcaaactattttcatataagctataag 31740024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 148
Target Start/End: Original strand, 33942113 - 33942226
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataagct-tttttatcagctgtaatagagagttcatagaaataagcttaaaacaacttatgg 134  Q
    |||||||||||| |||||||||| |||| || ||||||||||| | |||| || |||  | |||||||| | ||  |||| |||| |||||| ||||||     
T  33942113 aaaagataaaataaagtcaaactgttttcatgtaagctataagttgttttcataagccatcatagagagctaatgaaaattagctgaaaacagcttatga 33942212  T
Q  135 acatgtcataagtt 148  Q
    ||||||||||||||    
T  33942213 acatgtcataagtt 33942226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 41809277 - 41809224
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctct 163  Q
    |||||||||| ||||||||||||| |||||||||||||| ||| || |||||||    
T  41809277 gaaataagctaaaaacaacttatgaacatgtcataagttgtttccacaagctct 41809224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 113 - 169
Target Start/End: Original strand, 787373 - 787429
Alignment:
Q  113 ataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||| |||||| ||||||||||||||||||| | |||||||||| |||| ||||    
T  787373 ataagctgaaaacagcttatggacatgtcataagctgttttcataagttctcacaaa 787429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 107 - 171
Target Start/End: Complemental strand, 14316180 - 14316116
Alignment:
Q  107 atagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    ||||||||||||| |||||| |||||  | |||||||||||| ||| |||||||||||| |||||    
T  14316180 atagaaataagctgaaaacagcttatacatatgtcataagttgtttccataagctctccaaaata 14316116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 49 - 169
Target Start/End: Original strand, 42131594 - 42131714
Alignment:
Q  49 aagtcaaactatttttatataagctataagcttttttatcagctgtaatagagagttcatagaaataagcttaaaacaacttatggacatgtcataagtt 148  Q
    ||||||||||||| | ||||||| ||||||| |||| || |||| | || ||||  | |  |||||||||||||| || ||||||||||||| |||||||    
T  42131594 aagtcaaactattctcatataagatataagcattttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagtt 42131693  T
Q  149 attttcataagctctcccaaa 169  Q
     ||| ||| | |||| |||||    
T  42131694 gtttccatcatctcttccaaa 42131714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 135 - 171
Target Start/End: Original strand, 43808621 - 43808657
Alignment:
Q  135 acatgtcataagttattttcataagctctcccaaata 171  Q
    |||||||||||||||||||||||||||||| ||||||    
T  43808621 acatgtcataagttattttcataagctctctcaaata 43808657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 1160846 - 1160807
Alignment:
Q  41 ataaaatcaagtcaaactatttttatataagctataagct 80  Q
    ||||||| ||||||||||||||| ||||||||||||||||    
T  1160846 ataaaataaagtcaaactattttcatataagctataagct 1160807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 1830083 - 1830142
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||| |||||  | ||||||||||||||||| | ||| ||||||||||||||||    
T  1830083 gaaataagctgaaaactccctatggacatgtcataagatgtttccataagctctcccaaa 1830142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 17952825 - 17952770
Alignment:
Q  20 taagctgtttctatat-aaaagataaaatcaagtcaaactatttttatataagcta 74  Q
    |||||| ||||||||  |||||||||||| ||||||||||||||| ||||||||||    
T  17952825 taagctatttctataacaaaagataaaataaagtcaaactattttcatataagcta 17952770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 97 - 152
Target Start/End: Complemental strand, 25796245 - 25796190
Alignment:
Q  97 tagagagttcatagaaataagcttaaaacaacttatggacatgtcataagttattt 152  Q
    ||||||| | || |||||||||| ||||||||||||||| |||| |||||||||||    
T  25796245 tagagagcttattgaaataagctgaaaacaacttatggatatgtaataagttattt 25796190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 28677691 - 28677632
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||  ||||||||||||| | |||||||||| | |||||||||| |||||||||    
T  28677691 gaaataagccgaaaacaacttatgaaaatgtcataagctgttttcataagttctcccaaa 28677632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 164
Target Start/End: Complemental strand, 35538732 - 35538669
Alignment:
Q  101 gagttcatagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctc 164  Q
    ||||| ||| ||||||||  |||||| |||||| |||||||||||| |||||||| ||||||||    
T  35538732 gagtttatataaataagcggaaaacagcttatgaacatgtcataagctattttcacaagctctc 35538669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 171
Target Start/End: Original strand, 3673850 - 3673907
Alignment:
Q  113 ataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    ||||||| |||| |||||||| ||||||||||||||  |||||||||||||||| ||||    
T  3673850 ataagctcaaaa-aacttatgcacatgtcataagttgctttcataagctctccctaata 3673907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 14299666 - 14299604
Alignment:
Q  107 atagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||||||| |||||||  |||||| |||||||||||| ||| ||||| |||| |||||    
T  14299666 atagaaataagctgaaaacaatgtatggatatgtcataagttgtttccataaactcttccaaa 14299604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 18525268 - 18525210
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||| |||| |||||| | | |||||||||| ||||||||||||||||| ||||    
T  18525268 aaataagctgaaaataacttacgaatatgtcataagctattttcataagctctctcaaa 18525210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 32364762 - 32364704
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||| ||||||||| ||||||| |||||||| |  ||| |||||||||||||||    
T  32364762 aaataagctgaaaacaactcatggacacgtcataagctggttttataagctctcccaaa 32364704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 169
Target Start/End: Original strand, 32821844 - 32821906
Alignment:
Q  107 atagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||| || |||||| ||||||||||||||||||||| |||  |||| |||| |||||    
T  32821844 atagaaataaactgaaaacagcttatggacatgtcataagttgtttctataaactcttccaaa 32821906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 33256779 - 33256837
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||| | ||||  ||||| |||||||||||| | ||||||||||||||||||||    
T  33256779 aaataagctgagaacagtttatgaacatgtcataagctgttttcataagctctcccaaa 33256837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 35379047 - 35378993
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcc 165  Q
    ||||||||| ||||||||||||| ||| ||||| || | ||||||||||||||||    
T  35379047 aaataagctgaaaacaacttatgaacaagtcatcagctgttttcataagctctcc 35378993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 77
Target Start/End: Complemental strand, 36863733 - 36863691
Alignment:
Q  35 taaaagataaaatcaagtcaaactatttttatataagctataa 77  Q
    ||||||||||||| ||||||||| ||||||||||||| |||||    
T  36863733 taaaagataaaataaagtcaaacaatttttatataagttataa 36863691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 39929830 - 39929872
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataag 78  Q
    ||||||||||||||| ||||| | |||||||||||||||||||    
T  39929830 aaaagataaaatcaaatcaaattgtttttatataagctataag 39929872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 43635132 - 43635074
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||||||||| ||||  ||||||||||||||| |||  ||| |||||||||||    
T  43635132 aaataagcttaaaacagcttacagacatgtcataagttttttctatatgctctcccaaa 43635074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 3102656 - 3102705
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataagctttttt 85  Q
    |||| ||||||| |||||||||||||||||||||| |||| |||| ||||    
T  3102656 aaaatataaaataaagtcaaactatttttatataatctattagctgtttt 3102705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 4550803 - 4550844
Alignment:
Q  128 cttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||| |||||||||||||| ||| ||||||||||||||||    
T  4550803 cttatgaacatgtcataagttgtttccataagctctcccaaa 4550844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 110 - 155
Target Start/End: Complemental strand, 14451082 - 14451037
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttca 155  Q
    |||||||||| |||||| ||||||| ||||||||||||| ||||||    
T  14451082 gaaataagctgaaaacagcttatggtcatgtcataagttgttttca 14451037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 32757575 - 32757534
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataa 77  Q
    ||||||||||||||| ||||| | ||||||||||||||||||    
T  32757575 aaaagataaaatcaaatcaaattctttttatataagctataa 32757534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 35539686 - 35539735
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataagctttttt 85  Q
    |||||||||||| || |||||||||||| ||||||| |||||||| ||||    
T  35539686 aaaagataaaataaaatcaaactattttcatataagttataagctatttt 35539735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 43456739 - 43456686
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctct 163  Q
    |||||||||| ||||||  ||||||||||||||| |||| |||||| |||||||    
T  43456739 gaaataagctgaaaacagtttatggacatgtcatgagttgttttcacaagctct 43456686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 44269010 - 44269059
Alignment:
Q  116 agcttaaaacaacttatggacatgtcataagttattttcataagctctcc 165  Q
    |||| ||||||| |||||||||||||||||||| ||||  ||||||||||    
T  44269010 agctgaaaacaatttatggacatgtcataagttgtttttgtaagctctcc 44269059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 1160703 - 1160655
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataa 158  Q
    ||||||| || |||||||||||||||||||||||| ||| ||| |||||    
T  1160703 gaaataaactaaaaacaacttatggacatgtcataggttgtttccataa 1160655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 170
Target Start/End: Complemental strand, 9530756 - 9530701
Alignment:
Q  114 taagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaat 170  Q
    |||||| |||| |||||||||||||||||| || ||||| |||||||||| ||||||    
T  9530756 taagctaaaaataacttatggacatgtcat-agctatttccataagctcttccaaat 9530701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 161
Target Start/End: Original strand, 12215856 - 12215896
Alignment:
Q  121 aaaacaacttatggacatgtcataagttattttcataagct 161  Q
    |||||| ||||||||||||||||||| ||||| ||||||||    
T  12215856 aaaacagcttatggacatgtcataagctatttccataagct 12215896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 29936043 - 29936083
Alignment:
Q  122 aaacaacttatggacatgtcataagttattttcataagctc 162  Q
    |||||||||||||||||||| |||||| ||| |||||||||    
T  29936043 aaacaacttatggacatgtcttaagttgtttccataagctc 29936083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 146
Target Start/End: Original strand, 41144248 - 41144284
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataag 146  Q
    |||||||||| |||||||||||| |||||||||||||    
T  41144248 gaaataagctaaaaacaacttattgacatgtcataag 41144284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 148
Target Start/End: Complemental strand, 43911029 - 43910993
Alignment:
Q  112 aataagcttaaaacaacttatggacatgtcataagtt 148  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  43911029 aataagctgaaaacaacttatgaacatgtcataagtt 43910993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 96 - 159
Target Start/End: Original strand, 1647260 - 1647323
Alignment:
Q  96 atagagagttcatagaaataagcttaaaacaacttatggacatgtcataagttattttcataag 159  Q
    |||||||| | || |||||||||| |||||| ||||||  ||||||||||| | ||||||||||    
T  1647260 atagagagcttatggaaataagctgaaaacagcttatgagcatgtcataagctgttttcataag 1647323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 5759606 - 5759548
Alignment:
Q  111 aaataagcttaaa-acaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||| ||| |||||||||||||||||| |||| | ||| ||||||||||||||||    
T  5759606 aaataagctgaaacacaacttatggacatgtc-taagctgtttccataagctctcccaaa 5759548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 16451157 - 16451216
Alignment:
Q  111 aaataagcttaaaacaacttatggaca-tgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||| |||||| || ||| ||| ||||||||||| |||||||||| |||||||||    
T  16451157 aaataagctgaaaacagctcatgaacaatgtcataagttgttttcataagttctcccaaa 16451216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 27237936 - 27237889
Alignment:
Q  99 gagagttcatagaaataagcttaaaacaacttatggacatgtcataag 146  Q
    ||||||| || |||||||||| |||||| |||||| ||||||||||||    
T  27237936 gagagtttatggaaataagctaaaaacagcttatgtacatgtcataag 27237889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 32694158 - 32694209
Alignment:
Q  20 taagctgtttctatat-aaaagataaaatcaagtcaaactatttttatataa 70  Q
    |||||| ||||||||| |||||||||||| || ||| |||||||||||||||    
T  32694158 taagctatttctatatcaaaagataaaataaaatcagactatttttatataa 32694209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 161
Target Start/End: Complemental strand, 34652068 - 34652017
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagct 161  Q
    |||||||| | |||||| ||||||||||||||||||||| |||  |||||||    
T  34652068 gaaataagttgaaaacagcttatggacatgtcataagttgtttctataagct 34652017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 36 - 75
Target Start/End: Complemental strand, 37292454 - 37292415
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctat 75  Q
    |||||||||||| |||| |||||||||| |||||||||||    
T  37292454 aaaagataaaataaagtaaaactattttcatataagctat 37292415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 39621989 - 39622048
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||| ||||||| ||||| |  ||||||||||| |||||||||| |||| ||||    
T  39621989 gaaataagctgaaaacaatttatgaatttgtcataagttgttttcataagttctctcaaa 39622048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000004; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 46082075 - 46082128
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctc 164  Q
    ||||||||| |||||||||||||| ||||||||||||| |||||||||||||||    
T  46082075 aaataagctgaaaacaacttatggtcatgtcataagttgttttcataagctctc 46082128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 21247965 - 21248017
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctct 163  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  21247965 aaataagcttaaaacaacttatgaacatgtcataagttatttccataaactct 21248017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 33894665 - 33894724
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||| |||||||||||||||||||||||| | | ||||||||||||||| ||||    
T  33894665 gaaataagctgaaaacaacttatggacatgtcatatgctgttttcataagctctcacaaa 33894724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 3500999 - 3500938
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    |||||||||| |||||| || ||| |||||||||||||||||| ||||||||||| ||||||    
T  3500999 gaaataagctgaaaacagctgatgtacatgtcataagttatttccataagctctcacaaata 3500938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 27626248 - 27626104
Alignment:
Q  20 taagctgtttctatat-aaaagataaaatcaagtcaaactatttttatataa--gctataagcttttttatcagctgtaatagagagttcatagaaataa 116  Q
    |||||| ||||||||| ||||| |||||| ||||||||||||| ||||||||  || ||||||| |||  | |||| | ||  |||| | || |||||||    
T  27626248 taagctatttctatatcaaaagctaaaataaagtcaaactattattatataaatgcaataagctgtttcctaagctatcatgaagagcttatggaaataa 27626149  T
Q  117 gcttaaaacaacttatggacatgtcataagttattttcataagct 161  Q
    | ||||||||  |||||||||||||||||| | ||| ||||||||    
T  27626148 gtttaaaacagtttatggacatgtcataagctgtttccataagct 27626104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 29287265 - 29287318
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctct 163  Q
    |||||||||  ||||||| |||||||||||||||||| ||||||||||||||||    
T  29287265 gaaataagccaaaaacaatttatggacatgtcataagctattttcataagctct 29287318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 39568357 - 39568308
Alignment:
Q  109 agaaataagcttaaaacaacttatggacatgtcataagttattttcataa 158  Q
    ||||||||||  |||||||||||||||||||||||||||||||| |||||    
T  39568357 agaaataagccgaaaacaacttatggacatgtcataagttatttccataa 39568308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 28340434 - 28340394
Alignment:
Q  128 cttatggacatgtcataagttattttcataagctctcccaa 168  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  28340434 cttatggacatgtcataagttgttttcataagctctcccaa 28340394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 44808197 - 44808245
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataag 159  Q
    ||||||||| ||||||  |||||||||||||||||||||||||||||||    
T  44808197 aaataagctgaaaacaggttatggacatgtcataagttattttcataag 44808245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 28844528 - 28844583
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcc 165  Q
    ||||||| || ||||||||| |||||||||||||||||| |||||| |||||||||    
T  28844528 gaaataaactgaaaacaactgatggacatgtcataagttgttttcagaagctctcc 28844583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 48157152 - 48157093
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||| |||||| |||||||||||| |||||||| |||  |||||||||||||||    
T  48157152 gaaataagctgaaaacagcttatggacatggcataagttgtttctataagctctcccaaa 48157093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 33645993 - 33645939
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctc 164  Q
    ||||||| || |||||||||||| ||||||||||||||| ||| |||||||||||    
T  33645993 gaaataacctaaaaacaacttatagacatgtcataagttgtttccataagctctc 33645939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 99 - 165
Target Start/End: Complemental strand, 44615147 - 44615081
Alignment:
Q  99 gagagttcatagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcc 165  Q
    ||||||| || |||||||  | |||||| ||| ||||||||||||||||| ||||||||||||||||    
T  44615147 gagagtttatggaaataacgtgaaaacagcttgtggacatgtcataagttgttttcataagctctcc 44615081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 6263395 - 6263343
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctct 163  Q
    |||||||||| |||||||||||||||||| ||||||||||||| | ||||||||    
T  6263395 gaaataagct-aaaacaacttatggacatctcataagttatttgcgtaagctct 6263343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 161
Target Start/End: Complemental strand, 12234994 - 12234870
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataagcttttttatcagctgtaatagagagttcatagaaataagcttaaaacaacttatgga 135  Q
    |||||||||||| | ||||| || ||||  |||||| |||||| ||||| || |||| |  ||||||| | || |||||||||| |||||| ||||| ||    
T  12234994 aaaagataaaataatgtcaatctgttttcgtataagttataagattttt-atgagctttcctagagagcttatggaaataagctgaaaacagcttataga 12234896  T
Q  136 catgtcataagttattttcataagct 161  Q
    ||||||||||||| |||  |||||||    
T  12234895 catgtcataagttgtttctataagct 12234870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 31002724 - 31002773
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataagctttttt 85  Q
    |||||||||||| |||||||| |||||| |||||||||||||||| ||||    
T  31002724 aaaagataaaataaagtcaaaatattttcatataagctataagctgtttt 31002773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 49060472 - 49060545
Alignment:
Q  6 taagtacttatttttaagctgtttctatat-aaaagataaaatcaagtcaaactatttttatataagctataag 78  Q
    |||||| |||| | |||||| ||||||||  |||| ||||||| |||||||| |||||||||||||||||||||    
T  49060472 taagtatttatgtataagctatttctataacaaaaaataaaataaagtcaaattatttttatataagctataag 49060545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 753252 - 753180
Alignment:
Q  98 agagagttcatagaaataagct-taaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||| |||||||||||||  |||||| ||||| || |||||||||| ||||| |||||||||| |||||    
T  753252 agagagtttatagaaataagctaaaaaacagcttatagatatgtcataagctatttccataagctctaccaaa 753180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 31338469 - 31338513
Alignment:
Q  34 ataaaagataaaatcaagtcaaactatttttatataagctataag 78  Q
    |||||||||||||| |||||||||| |||||||||||| ||||||    
T  31338469 ataaaagataaaataaagtcaaactgtttttatataagttataag 31338513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 85
Target Start/End: Original strand, 3468579 - 3468626
Alignment:
Q  38 aagataaaatcaagtcaaactatttttatataagctataagctttttt 85  Q
    |||||||||| |||||||||||||||  |||||| |||||||||||||    
T  3468579 aagataaaatgaagtcaaactattttcgtataagttataagctttttt 3468626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 36598388 - 36598329
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||| |||||| |||||| |||||||||||| | ||| ||||||||||| ||||    
T  36598388 gaaataagctgaaaacagcttatgaacatgtcataagatgtttccataagctctctcaaa 36598329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 45078316 - 45078371
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcc 165  Q
    |||||||| | |||||| |||||||||||||||||||||||||  ||||| |||||    
T  45078316 gaaataagttgaaaacagcttatggacatgtcataagttatttctataagttctcc 45078371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 2048174 - 2048100
Alignment:
Q  10 tacttatttttaagctgtttctatataaaagataaaatcaagtcaaactatttttatataagctataagcttttt 84  Q
    ||||||| | |||||| ||||| || |||||||||| | ||||||||||  ||| | ||||||||||||||||||    
T  2048174 tacttatgtataagctatttctttacaaaagataaattaaagtcaaactgatttcagataagctataagcttttt 2048100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 164
Target Start/End: Original strand, 4001735 - 4001801
Alignment:
Q  98 agagagttcatagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctc 164  Q
    |||||||| ||||||||| ||| |||||||||||| |||||| |||||| | ||| || ||||||||    
T  4001735 agagagtttatagaaatatgctgaaaacaacttattgacatgccataagctgtttccaaaagctctc 4001801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 86
Target Start/End: Complemental strand, 27493991 - 27493941
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataagctttttta 86  Q
    |||||||||||| ||||||||||| || |||| |||||||||| |||||||    
T  27493991 aaaagataaaattaagtcaaactacttatatacaagctataagttttttta 27493941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 86
Target Start/End: Complemental strand, 27500649 - 27500599
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataagctttttta 86  Q
    |||||||||||| ||||||||||| || |||| |||||||||| |||||||    
T  27500649 aaaagataaaattaagtcaaactacttatatacaagctataagttttttta 27500599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 86
Target Start/End: Complemental strand, 27515441 - 27515391
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataagctttttta 86  Q
    |||||||||||| ||||||||||| || |||| |||||||||| |||||||    
T  27515441 aaaagataaaattaagtcaaactacttatatacaagctataagttttttta 27515391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 166
Target Start/End: Complemental strand, 27517898 - 27517833
Alignment:
Q  100 agagttcatagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctccc 166  Q
    |||||| || |||||||||| |||||  ||||||||||||||||||||| ||| | |||||||||||    
T  27517898 agagtttatggaaataagctgaaaactgcttatggacatgtcataagtt-tttccttaagctctccc 27517833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 171
Target Start/End: Original strand, 31149705 - 31149739
Alignment:
Q  137 atgtcataagttattttcataagctctcccaaata 171  Q
    |||||||||||||||||||||||||||| ||||||    
T  31149705 atgtcataagttattttcataagctctctcaaata 31149739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 171
Target Start/End: Original strand, 31167997 - 31168031
Alignment:
Q  137 atgtcataagttattttcataagctctcccaaata 171  Q
    |||||||||||||||||||||||||||| ||||||    
T  31167997 atgtcataagttattttcataagctctctcaaata 31168031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 34035956 - 34036014
Alignment:
Q  111 aaataagcttaaaacaacttatggaca-tgtcataagttattttcataagctctcccaa 168  Q
    ||||||| | ||||||||||||| ||| |||||||||||||||||||||| ||| ||||    
T  34035956 aaataagttgaaaacaacttatgaacaatgtcataagttattttcataagttcttccaa 34036014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 169
Target Start/End: Original strand, 36537951 - 36538005
Alignment:
Q  115 aagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||| ||||||||||||| |||||||||||||| ||| |||||| |||| ||||    
T  36537951 aagctaaaaacaacttatgaacatgtcataagttgtttccataagttctctcaaa 36538005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 47004053 - 47004099
Alignment:
Q  39 agataaaatcaagtcaaactatttttatataagctataagctttttt 85  Q
    ||||||||| |||||||||||||||||||| | ||||||||| ||||    
T  47004053 agataaaataaagtcaaactatttttatatgaactataagctgtttt 47004099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 47134788 - 47134746
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttatttt 153  Q
    ||||||||| |||||||||||||||| ||||||||||| ||||    
T  47134788 aaataagctgaaaacaacttatggacgtgtcataagttgtttt 47134746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 941566 - 941627
Alignment:
Q  98 agagagttcatagaaataagcttaaaacaacttatggacatgtcataagttattttcataag 159  Q
    |||||| | ||||||||||  |||||||  ||||||||||||||||||||| ||| ||||||    
T  941566 agagagcttatagaaataaatttaaaactgcttatggacatgtcataagttgtttccataag 941627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 18749917 - 18749880
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagct 73  Q
    |||||||||| | |||||||||||||||||||||||||    
T  18749917 aaaagataaagtaaagtcaaactatttttatataagct 18749880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 110 - 155
Target Start/End: Complemental strand, 20888426 - 20888381
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttca 155  Q
    |||||||||| ||||||||||||| ||||| |||||||| ||||||    
T  20888426 gaaataagctgaaaacaacttatgaacatggcataagttgttttca 20888381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 30496744 - 30496797
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctc 164  Q
    ||||||||| ||||||||||| || |||| |||||| | |||||||||||||||    
T  30496744 aaataagctgaaaacaacttacgggcatgccataagctgttttcataagctctc 30496797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 32329113 - 32329166
Alignment:
Q  116 agcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||| ||||||||||| |||||||||||||| |  |||| ||||||||||||||    
T  32329113 agctgaaaacaacttagggacatgtcataagctgctttcttaagctctcccaaa 32329166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 39360061 - 39360114
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctct 163  Q
    |||||||||| ||| ||||||||||| |||||||||||| ||| ||||| ||||    
T  39360061 gaaataagctgaaagcaacttatggatatgtcataagttgtttccataaactct 39360114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 111 - 148
Target Start/End: Complemental strand, 39539812 - 39539775
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagtt 148  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  39539812 aaataagctgaaaacagcttatggacatgtcataagtt 39539775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 39551580 - 39551527
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctct 163  Q
    |||||||||| | |||| ||||||||||||||||||||| ||| ||||| ||||    
T  39551580 gaaataagctgacaacaccttatggacatgtcataagttgtttccataacctct 39551527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 6857369 - 6857317
Alignment:
Q  112 aataagcttaaaacaacttatggacatgtcataagttattttcataagctctc 164  Q
    |||||| | ||||||||||||||||||| |||||| | ||| |||||||||||    
T  6857369 aataagttgaaaacaacttatggacatggcataagctgtttccataagctctc 6857317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 9423626 - 9423578
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataa 158  Q
    |||||||||| ||||||||||||| ||||||||||| || ||| |||||    
T  9423626 gaaataagctgaaaacaacttatgaacatgtcataaattgtttccataa 9423578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 15740442 - 15740394
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataag 159  Q
    ||||||| | |||||| |||||| |||||||||||||| ||||||||||    
T  15740442 aaataagttaaaaacagcttatgaacatgtcataagttgttttcataag 15740394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 142
Target Start/End: Complemental strand, 24363633 - 24363601
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtca 142  Q
    |||||||||| ||||||||||||||||||||||    
T  24363633 gaaataagctgaaaacaacttatggacatgtca 24363601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 25670617 - 25670569
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataag 159  Q
    ||||||||| ||||||| ||||  |||||||||||||| ||||||||||    
T  25670617 aaataagctgaaaacaatttattaacatgtcataagttgttttcataag 25670569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 40689093 - 40689049
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataagct 80  Q
    |||||||||||| |||| ||| |||||| ||||||||||||||||    
T  40689093 aaaagataaaataaagttaaattattttcatataagctataagct 40689049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 44151512 - 44151447
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataag----ttattttcataagctctcccaaata 171  Q
    |||||||||| |||||| ||||||||||||||||||     || ||||||||||||||| ||||||    
T  44151512 gaaataagctgaaaacatcttatggacatgtcataaaaaaattgttttcataagctctctcaaata 44151447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 44989942 - 44989902
Alignment:
Q  129 ttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||||||||||| ||||| |||||||||| |||||    
T  44989942 ttatggacatgtcataagctatttccataagctctgccaaa 44989902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 4966194 - 4966249
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcc 165  Q
    ||||||| || |||||||||||||||||| ||||||||  |||  |||||||||||    
T  4966194 gaaataaactgaaaacaacttatggacatatcataagtggtttctataagctctcc 4966249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 121 - 148
Target Start/End: Original strand, 8341877 - 8341904
Alignment:
Q  121 aaaacaacttatggacatgtcataagtt 148  Q
    ||||||||||||||||||||||||||||    
T  8341877 aaaacaacttatggacatgtcataagtt 8341904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 122 - 157
Target Start/End: Original strand, 9872922 - 9872957
Alignment:
Q  122 aaacaacttatggacatgtcataagttattttcata 157  Q
    ||||||||||||||||||||||||||| ||| ||||    
T  9872922 aaacaacttatggacatgtcataagttgtttccata 9872957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 159
Target Start/End: Original strand, 11048067 - 11048114
Alignment:
Q  112 aataagcttaaaacaacttatggacatgtcataagttattttcataag 159  Q
    |||||||| |||||| |||||| |||||||||||||| |||| |||||    
T  11048067 aataagctgaaaacagcttatgaacatgtcataagttgttttgataag 11048114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 19719047 - 19719098
Alignment:
Q  113 ataagcttaaaacaacttatggacatgtcataagttattttcataagctctc 164  Q
    ||||||| ||||||  ||||| |||||||||||||| |||||||||| ||||    
T  19719047 ataagctgaaaacagtttatgaacatgtcataagttgttttcataagttctc 19719098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 20553141 - 20553196
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcc 165  Q
    ||||||| || ||||||||||||| ||||||| |||| | ||| ||||||||||||    
T  20553141 gaaataatctgaaaacaacttatgaacatgtcgtaagctgtttccataagctctcc 20553196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 22387928 - 22387869
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||| | ||||||  ||||  ||||| |||||||| ||||||||||||||||||||    
T  22387928 gaaataagttaaaaacagtttataaacatgccataagttgttttcataagctctcccaaa 22387869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 153
Target Start/End: Complemental strand, 25797056 - 25797013
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttatttt 153  Q
    |||||||||| |||||||||| | ||||||||||||| ||||||    
T  25797056 gaaataagctgaaaacaacttgtagacatgtcataagctatttt 25797013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 100 - 143
Target Start/End: Complemental strand, 27496449 - 27496406
Alignment:
Q  100 agagttcatagaaataagcttaaaacaacttatggacatgtcat 143  Q
    |||||| || |||||||||| |||||| ||||||||||||||||    
T  27496449 agagtttatggaaataagctgaaaacagcttatggacatgtcat 27496406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 100 - 143
Target Start/End: Complemental strand, 27503107 - 27503064
Alignment:
Q  100 agagttcatagaaataagcttaaaacaacttatggacatgtcat 143  Q
    |||||| || |||||||||| |||||| ||||||||||||||||    
T  27503107 agagtttatggaaataagctgaaaacagcttatggacatgtcat 27503064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 28165021 - 28165152
Alignment:
Q  4 agtaagtacttatttttaagctgtttctatat-aaaagataaaatcaagtcaaactatttttatataagctataagct-tttttatcagctgtaatagag 101  Q
    ||||||| ||||| | |||| | ||||||||  |||||||||||| |||||||| | |||| ||||||||||||| || | ||||| |||| | || |||    
T  28165021 agtaagtgcttatgtataagttctttctataacaaaagataaaatgaagtcaaattgttttaatataagctataaactgtctttataagctatcatggag 28165120  T
Q  102 agttcatagaaataagcttaaaacaacttatg 133  Q
    || | || |||||||| | |||||| ||||||    
T  28165121 agcttatggaaataagttgaaaacagcttatg 28165152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 145
Target Start/End: Original strand, 33871283 - 33871322
Alignment:
Q  106 catagaaataagcttaaaacaacttatggacatgtcataa 145  Q
    |||| ||||||||| ||||||||||||| |||||||||||    
T  33871283 catataaataagctcaaaacaacttatgaacatgtcataa 33871322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 34754842 - 34754783
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||| |||||||||||| | | ||||||||| | ||||| ||||||||| ||||    
T  34754842 gaaataagctgaaaacaacttataggcttgtcataagatgttttcttaagctctctcaaa 34754783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 146
Target Start/End: Original strand, 35267397 - 35267436
Alignment:
Q  107 atagaaataagcttaaaacaacttatggacatgtcataag 146  Q
    ||||||||||||| |||||||| |||| ||||||||||||    
T  35267397 atagaaataagctgaaaacaacctatgaacatgtcataag 35267436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 39334231 - 39334290
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||| ||  ||||||||||||||||||||| || ||| ||||| |||| |||||    
T  39334231 gaaataagctgaatgcaacttatggacatgtcataaattgtttccataaactctaccaaa 39334290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 145
Target Start/End: Original strand, 39345509 - 39345544
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataa 145  Q
    |||||||||| ||| |||||||||||||||||||||    
T  39345509 gaaataagctgaaagcaacttatggacatgtcataa 39345544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 163
Target Start/End: Complemental strand, 39566237 - 39566186
Alignment:
Q  112 aataagcttaaaacaacttatggacatgtcataagttattttcataagctct 163  Q
    |||||||| |||||||||||||||||||| ||||  | ||| ||||||||||    
T  39566237 aataagctgaaaacaacttatggacatgtgataaaatgtttccataagctct 39566186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 46531496 - 46531531
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataag 71  Q
    |||||||||||| |||||||||| ||||||||||||    
T  46531496 aaaagataaaataaagtcaaactgtttttatataag 46531531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 40; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 27614 - 27673
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||| |||||||||||| | ||||||||||| ||||| ||||||||||||||||    
T  27614 gaaataagctgaaaacaacttatagccatgtcataagctatttccataagctctcccaaa 27673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.00000000000006; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 6428056 - 6428115
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||| ||||||| |||||||||||||||||||||||| ||||||||| ||||| ||||    
T  6428056 gaaatatgcttaaatcaacttatggacatgtcataagttgttttcataatctctctcaaa 6428115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 143
Target Start/End: Complemental strand, 7694115 - 7694009
Alignment:
Q  38 aagataaaatcaagtcaaactatttttatataagctataagctttttt-atcagctgtaatagagagttcatagaaataagcttaaaacaacttatggac 136  Q
    ||||| |||| |||||||||| ||||| ||||||||||||||| |||| || || | |  | ||||||| || |||||||||| ||||||||||||| ||    
T  7694115 aagatgaaatgaagtcaaactgtttttgtataagctataagctgttttcataagttatcctggagagtttatggaaataagctgaaaacaacttatgaac 7694016  T
Q  137 atgtcat 143  Q
    |||||||    
T  7694015 atgtcat 7694009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 50 - 160
Target Start/End: Original strand, 10173500 - 10173609
Alignment:
Q  50 agtcaaactatttttatataagctataagcttttttatcagctgtaatagagagttcatagaaataagcttaaaacaacttatggacatgtcataagtta 149  Q
    |||||||||||||| |||||||||||| ||||||| || ||||||  || |||| | |||||||||| | ||||||| |||| | ||||||||| ||||     
T  10173500 agtcaaactattttcatataagctatatgctttttaataagctgtcctaaagagcttatagaaataaac-taaaacagcttacgaacatgtcatgagttg 10173598  T
Q  150 ttttcataagc 160  Q
    |||||| ||||    
T  10173599 ttttcacaagc 10173609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 145
Target Start/End: Complemental strand, 54325144 - 54325034
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataagct-tttttatcagctgtaatagagagttcatagaaataagcttaaaacaacttatgg 134  Q
    |||||||||||| |||||||||| |||| |||||||||||||||| |||| |  |||| | || ||||||| || || |||| || |||||| |||||||    
T  54325144 aaaagataaaataaagtcaaactgttttcatataagctataagctattttcaaaagctatcatggagagtttatggagataaactgaaaacagcttatgg 54325045  T
Q  135 acatgtcataa 145  Q
    |||| ||||||    
T  54325044 acatatcataa 54325034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 4684139 - 4684078
Alignment:
Q  108 tagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||||| |||||| |||| ||||||||| |||||||||||  ||||||||||||||    
T  4684139 tagaaataagctaaaaacagcttacggacatgtcttaagttattttactaagctctcccaaa 4684078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 21952986 - 21953047
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    ||||||| || ||||||  |||||||||||||||||||| ||| ||||||||||||||||||    
T  21952986 gaaataaactaaaaacaggttatggacatgtcataagttctttccataagctctcccaaata 21953047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 14986994 - 14986958
Alignment:
Q  125 caacttatggacatgtcataagttattttcataagct 161  Q
    |||||||||||||||||||||||||||||||||||||    
T  14986994 caacttatggacatgtcataagttattttcataagct 14986958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 30581786 - 30581734
Alignment:
Q  34 ataaaagataaaatcaagtcaaactatttttatataagctataagctttttta 86  Q
    |||||||||||||| |||||||||||||||  ||||||||||||||| |||||    
T  30581786 ataaaagataaaatgaagtcaaactattttcgtataagctataagctgtttta 30581734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 34 - 133
Target Start/End: Complemental strand, 31038976 - 31038876
Alignment:
Q  34 ataaaagataaaatcaagtcaaactatttttatataagctataagct-tttttatcagctgtaatagagagttcatagaaataagcttaaaacaacttat 132  Q
    |||| ||||||||| |||||||| | |||| ||||||| |||||||  ||||||| |||| |||||||||  | ||||||||||| | ||||||||||||    
T  31038976 ataatagataaaataaagtcaaattgttttcatataagttataagccatttttataagctctaatagagaacttatagaaataagttgaaaacaacttat 31038877  T
Q  133 g 133  Q
    |    
T  31038876 g 31038876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 33534200 - 33534140
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    ||||||||| ||||||||||||||| |||||| || || ||||||||||||||| ||||||    
T  33534200 aaataagctgaaaacaacttatggatatgtcacaatttgttttcataagctctctcaaata 33534140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 3176136 - 3176081
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcc 165  Q
    |||||||||| |||||||||||| |||||| |||||| | ||||||||||||||||    
T  3176136 gaaataagctgaaaacaacttatagacatgacataagatgttttcataagctctcc 3176081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 2996612 - 2996670
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||| | |||| | ||||||||||||||||||||| ||||||||||||||| ||||    
T  2996612 aaataagttgaaaaaagcttatggacatgtcataagttgttttcataagctctctcaaa 2996670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 169
Target Start/End: Original strand, 23819124 - 23819186
Alignment:
Q  107 atagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||||| | |||||||||||||||||||||||||| | ||||| ||| |||| |||||    
T  23819124 atagaaataagatgaaaacaacttatggacatgtcataagctgttttcttaaactcttccaaa 23819186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 115 - 169
Target Start/End: Original strand, 25583635 - 25583689
Alignment:
Q  115 aagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||| |||||||||| ||||||||||||||||| ||| ||||||| ||||||||    
T  25583635 aagctgaaaacaacttttggacatgtcataagttgtttgcataagcgctcccaaa 25583689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 27623598 - 27623640
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataag 78  Q
    |||||||||||| ||||||||||||||| ||||||||||||||    
T  27623598 aaaagataaaataaagtcaaactattttaatataagctataag 27623640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 46415823 - 46415765
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||| |||| |||||||||||||||||||||||| ||| ||| ||||| ||||||||||    
T  46415823 aaattagctgaaaacaacttatggacatgtcataggttgtttgcataaactctcccaaa 46415765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 163
Target Start/End: Original strand, 8147922 - 8147959
Alignment:
Q  126 aacttatggacatgtcataagttattttcataagctct 163  Q
    |||||||||||||||||||||||||||||||| |||||    
T  8147922 aacttatggacatgtcataagttattttcatatgctct 8147959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 146
Target Start/End: Original strand, 19304915 - 19305000
Alignment:
Q  61 ttttatataagctataagcttttttatcagctgtaatagagagttcatagaaataagcttaaaacaacttatggacatgtcataag 146  Q
    ||||| ||||||||||   |||||||| |||| |  | ||||||| || |||| ||||| ||||||||||||||||||||||||||    
T  19304915 ttttacataagctatacaattttttataagctattttggagagttaatggaaacaagctgaaaacaacttatggacatgtcataag 19305000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 146
Target Start/End: Complemental strand, 29467669 - 29467620
Alignment:
Q  97 tagagagttcatagaaataagcttaaaacaacttatggacatgtcataag 146  Q
    ||||||||| || |||||||||| |||||| |||||||||||||||||||    
T  29467669 tagagagtttatggaaataagctgaaaacagcttatggacatgtcataag 29467620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 1965979 - 1966031
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctc 162  Q
    |||||||| | |||||| |||||| |||||||||||||| |||||||||||||    
T  1965979 gaaataagttaaaaacagcttatgaacatgtcataagttgttttcataagctc 1966031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 113 - 169
Target Start/End: Original strand, 2841667 - 2841723
Alignment:
Q  113 ataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||| |||||||||||| |||||||||||||||  |||||||| ||||| ||||    
T  2841667 ataagctgaaaacaacttattgacatgtcataagttgctttcataaactctcgcaaa 2841723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 27725271 - 27725311
Alignment:
Q  129 ttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  27725271 ttatggacatgtcataagttatttccataagctctctcaaa 27725311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 55547076 - 55547036
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttat 150  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  55547076 gaaataagctaaaaacaacttatagacatgtcataagttat 55547036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 1137750 - 1137805
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcc 165  Q
    ||||||| || ||||||||||||| |||||||||||| | |||||||||| |||||    
T  1137750 gaaataaactgaaaacaacttatgaacatgtcataagatgttttcataagttctcc 1137805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 36 - 146
Target Start/End: Original strand, 24929456 - 24929567
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataagct-tttttatcagctgtaatagagagttcatagaaataagcttaaaacaacttatgg 134  Q
    |||||||||||| ||||| |||| |||| ||| |||||||||| | |||| || | || || ||||||| | || |||||||||| ||||||| |||||     
T  24929456 aaaagataaaataaagtctaactgttttcataaaagctataagttgttttcataaactctactagagagcttatggaaataagctgaaaacaatttatga 24929555  T
Q  135 acatgtcataag 146  Q
    ||||| ||||||    
T  24929556 acatgccataag 24929567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 27123384 - 27123325
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||| | |||||||||||  ||||||||||||||| ||| ||||||||||| ||||    
T  27123384 gaaataagttgaaaacaacttaaagacatgtcataagttgtttccataagctctctcaaa 27123325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 32071907 - 32071954
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataa 158  Q
    |||||||||||||||| ||||||||| ||||||||||| ||| |||||    
T  32071907 aaataagcttaaaacagcttatggacgtgtcataagttgtttccataa 32071954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 150
Target Start/End: Original strand, 46201383 - 46201426
Alignment:
Q  107 atagaaataagcttaaaacaacttatggacatgtcataagttat 150  Q
    ||||||||||||| |||||||| |||| ||||||||||||||||    
T  46201383 atagaaataagctgaaaacaacctatgaacatgtcataagttat 46201426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 50800062 - 50800003
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||| |||||| ||||| ||||||||||||||| ||| ||| || |||||||||    
T  50800062 gaaataagctgaaaacagcttatagacatgtcataagttgtttacattagttctcccaaa 50800003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 4071845 - 4071887
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataag 78  Q
    |||||||||||| |||||||| |||||| ||||||||||||||    
T  4071845 aaaagataaaataaagtcaaattattttcatataagctataag 4071887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 6978993 - 6978935
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||| |||||| ||||| |||||||||||||||||||  ||||| ||| |||||    
T  6978993 aaataagctgaaaacagcttatagacatgtcataagttatttcaataagttctgccaaa 6978935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 40709518 - 40709439
Alignment:
Q  6 taagtacttatttttaagctgtttctat-ataaaagataaaatcaagtcaaactattt-ttatataagctataagctttttt 85  Q
    ||||| ||||||| |||||||||||||| | ||||||||||||  ||||||||| ||| |||| ||||||||||||| ||||    
T  40709518 taagtgcttatttataagctgtttctataacaaaagataaaat--agtcaaactttttcttatgtaagctataagctgtttt 40709439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 42461290 - 42461348
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||| ||| ||||||||| ||| |||||| | |||||||||||| |||||||||    
T  42461290 aaataagctgaaatcaacttatgaacacgtcataggctattttcataagttctcccaaa 42461348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 44319903 - 44319961
Alignment:
Q  27 tttctatataaaagataaaatcaagtcaaactatttttatataagctataagctttttt 85  Q
    |||||||| |||||||||||| ||||| |||| |||| |||||||||| ||||| ||||    
T  44319903 tttctataaaaaagataaaataaagtcgaactgttttcatataagctacaagctatttt 44319961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 46013407 - 46013365
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataag 78  Q
    |||||||||||| |||||||||| |||||||||||| ||||||    
T  46013407 aaaagataaaataaagtcaaactgtttttatataagttataag 46013365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 53155299 - 53155357
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||| ||| ||| |||| ||||||||||||||| ||| ||||||||||| ||||    
T  53155299 aaataagctgaaagcaatttatagacatgtcataagttgtttgcataagctctcacaaa 53155357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 19429526 - 19429485
Alignment:
Q  128 cttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    ||||||||||||||||||||| | | ||||||||||||||||    
T  19429526 cttatggacatgtcataagttttctccataagctctcccaaa 19429485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 27721756 - 27721809
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctc 164  Q
    ||||||||| |||||| |||||||| |||||||||||  |||| ||||||||||    
T  27721756 aaataagctgaaaacagcttatggatatgtcataagtagtttttataagctctc 27721809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 30631994 - 30632043
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataag 159  Q
    ||||||||||||||||| |||||| ||||| |||||||| |||| |||||    
T  30631994 gaaataagcttaaaacagcttatgaacatgccataagttgtttttataag 30632043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 37575978 - 37575909
Alignment:
Q  100 agagttcatagaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||| || ||||| |||| |||||||||||||   |||| |||||||||||||||||| |||| ||||    
T  37575978 agagtttatggaaatgagctgaaaacaacttatgagtatgttataagttattttcataagttctctcaaa 37575909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 43372076 - 43372035
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctataa 77  Q
    ||||||||||||  ||||||||| ||||||||||||||||||    
T  43372076 aaaagataaaatacagtcaaactgtttttatataagctataa 43372035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 39 - 159
Target Start/End: Original strand, 46110169 - 46110290
Alignment:
Q  39 agataaaatcaagtcaaactatttttatataagctataagctttttt-atcagctgtaatagagagttcatagaaataagcttaaaacaacttatggaca 137  Q
    |||| |||| ||||||| | |||||||||   ||||||| || |||| || |||| | || ||||| | ||||||||||||| |||||||||||||   |    
T  46110169 agatgaaataaagtcaagccatttttatacttgctataaactgttttcataagctatgattgagagcttatagaaataagctgaaaacaacttatgagta 46110268  T
Q  138 tgtcataagttattttcataag 159  Q
    | ||||||||| ||||||||||    
T  46110269 tatcataagttgttttcataag 46110290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 4691887 - 4691935
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataag 159  Q
    ||||||||| |||||||| ||||| ||||||||||||| ||| ||||||    
T  4691887 aaataagctgaaaacaacatatgggcatgtcataagttgtttccataag 4691935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 6987754 - 6987714
Alignment:
Q  129 ttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||||||||||||| | | ||||||||||||||||    
T  6987754 ttatggacatgtcataagttgtatccataagctctcccaaa 6987714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 21683543 - 21683507
Alignment:
Q  128 cttatggacatgtcataagttattttcataagctctc 164  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  21683543 cttatggacttgtcataagttgttttcataagctctc 21683507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 21953243 - 21953279
Alignment:
Q  43 aaaatcaagtcaaactatttttatataagctataagc 79  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  21953243 aaaataaagtcaaactctttttatataagctataagc 21953279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 23676680 - 23676720
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctata 76  Q
    |||||||||||| ||||| |||||||||| |||||||||||    
T  23676680 aaaagataaaataaagtcgaactatttttttataagctata 23676720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 165
Target Start/End: Original strand, 27970107 - 27970151
Alignment:
Q  121 aaaacaacttatggacatgtcataagttattttcataagctctcc 165  Q
    |||||| ||||| ||||||||||||||| ||||||||| ||||||    
T  27970107 aaaacagcttatagacatgtcataagttgttttcataaactctcc 27970151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 32724082 - 32724118
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagc 72  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  32724082 aaaagataaaataaagtcaaactattttcatataagc 32724118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 39931427 - 39931371
Alignment:
Q  20 taagctgtttctatataaaagataaaatcaagtcaaactatttttatataagctata 76  Q
    ||||| ||||||||  |||||||||||| |||||||||  ||||||| |||||||||    
T  39931427 taagcagtttctattcaaaagataaaataaagtcaaacattttttatgtaagctata 39931371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 164
Target Start/End: Complemental strand, 42321982 - 42321858
Alignment:
Q  40 gataaaatcaagtcaaactatttttatataagctataagcttttttatcagctgtaatagagagttcatagaaataagcttaaaacaacttatggacatg 139  Q
    |||||||| |||||||| | |||| ||||||  |||||| | |||| | || | ||||  |||||| | |||| ||| || ||||||||||||| |||||    
T  42321982 gataaaataaagtcaaattgttttcatataaattataagttgttttctaagttataatgaagagtttaaagaactaaactgaaaacaacttatgaacatg 42321883  T
Q  140 tcataagttattttcataagctctc 164  Q
    | | |||||| || |||||||||||    
T  42321882 ttacaagttaattccataagctctc 42321858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 53315365 - 53315425
Alignment:
Q  111 aaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    ||||||| | |||| | ||||||||||||| ||| ||| ||||||||||||||| ||||||    
T  53315365 aaataagttaaaaatagcttatggacatgtgatatgttgttttcataagctctcacaaata 53315425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 7730656 - 7730699
Alignment:
Q  128 cttatggacatgtcataagttattttcataagctctcccaaata 171  Q
    ||||||||||||||||||||| ||| | |||||||||| |||||    
T  7730656 cttatggacatgtcataagttgtttccttaagctctccaaaata 7730699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 145
Target Start/End: Complemental strand, 8469409 - 8469374
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataa 145  Q
    |||||||||| ||||||||||||| |||||||||||    
T  8469409 gaaataagctgaaaacaacttatgaacatgtcataa 8469374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 36 - 75
Target Start/End: Complemental strand, 20936109 - 20936070
Alignment:
Q  36 aaaagataaaatcaagtcaaactatttttatataagctat 75  Q
    |||||||||||| ||||||||||||||| || ||||||||    
T  20936109 aaaagataaaataaagtcaaactattttcatgtaagctat 20936070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 125 - 168
Target Start/End: Original strand, 21953321 - 21953364
Alignment:
Q  125 caacttatggacatgtcataagttattttcataagctctcccaa 168  Q
    ||||||||||||||| |||| ||| ||| |||||||||||||||    
T  21953321 caacttatggacatgacatatgttttttccataagctctcccaa 21953364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 109 - 152
Target Start/End: Complemental strand, 22684554 - 22684511
Alignment:
Q  109 agaaataagcttaaaacaacttatggacatgtcataagttattt 152  Q
    ||||||||||| |||||| ||||||||||| ||||||| |||||    
T  22684554 agaaataagctgaaaacagcttatggacatatcataagctattt 22684511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 52754637 - 52754696
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagctctcccaaa 169  Q
    |||||||||| ||| || |||||||||| |||||||  | |||||||||||||| |||||    
T  52754637 gaaataagctgaaagcagcttatggacacgtcataaactgttttcataagctcttccaaa 52754696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 36; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 161
Target Start/End: Complemental strand, 10649 - 10598
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataagttattttcataagct 161  Q
    |||||||||| ||||||||||||||||||||||| |||| ||| ||||||||    
T  10649 gaaataagctgaaaacaacttatggacatgtcattagttgtttacataagct 10598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 35; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 12732 - 12682
Alignment:
Q  114 taagcttaaaacaacttatggacatgtcataagttattttcataagctctc 164  Q
    |||||| |||||||||||||||||||||||||||| ||| |||||| ||||    
T  12732 taagctgaaaacaacttatggacatgtcataagttgtttccataaggtctc 12682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 33; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 4994 - 5046
Alignment:
Q  107 atagaaataagcttaaaacaacttatggacatgtcataagttattttcataag 159  Q
    ||||||||||||| ||| || ||||||||||||||||||| | ||||||||||    
T  4994 atagaaataagctaaaatcagcttatggacatgtcataagctgttttcataag 5046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 33; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.0000000009
Query Start/End: Original strand, 122 - 158
Target Start/End: Original strand, 38642 - 38678
Alignment:
Q  122 aaacaacttatggacatgtcataagttattttcataa 158  Q
    ||||||||||||||||||||||||||||||| |||||    
T  38642 aaacaacttatggacatgtcataagttatttccataa 38678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 32; Significance: 0.000000004; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 6600 - 6561
Alignment:
Q  41 ataaaatcaagtcaaactatttttatataagctataagct 80  Q
    ||||||| ||||||||||||||| ||||||||||||||||    
T  6600 ataaaataaagtcaaactattttcatataagctataagct 6561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 13620 - 13581
Alignment:
Q  41 ataaaatcaagtcaaactatttttatataagctataagct 80  Q
    ||||||| ||||||||||||||| ||||||||||||||||    
T  13620 ataaaataaagtcaaactattttcatataagctataagct 13581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 31; Significance: 0.00000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 159
Target Start/End: Complemental strand, 51973 - 51935
Alignment:
Q  121 aaaacaacttatggacatgtcataagttattttcataag 159  Q
    ||||||||||||||||||||||||| |||||| ||||||    
T  51973 aaaacaacttatggacatgtcataaattatttccataag 51935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 1212 - 1140
Alignment:
Q  6 taagtacttatttttaagctgtttctatat-aaaagataaaatcaagtcaaactatttttatataagctataa 77  Q
    ||||| ||||| | |||||| ||||||||  |||||||||||| ||||||||||||| | |||||||| ||||    
T  1212 taagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaactattctcatataagccataa 1140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 2763 - 2835
Alignment:
Q  6 taagtacttatttttaagctgtttctatat-aaaagataaaatcaagtcaaactatttttatataagctataa 77  Q
    ||||| ||||| | |||||| ||||||||  |||||||||||| ||||||||||||| | |||||||| ||||    
T  2763 taagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaactattctcatataagccataa 2835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 146
Target Start/End: Original strand, 3511 - 3547
Alignment:
Q  110 gaaataagcttaaaacaacttatggacatgtcataag 146  Q
    |||||||||| |||||||||||||||||| |||||||    
T  3511 gaaataagctgaaaacaacttatggacatatcataag 3547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 28; Significance: 0.0000009; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 122 - 161
Target Start/End: Complemental strand, 295910 - 295871
Alignment:
Q  122 aaacaacttatggacatgtcataagttattttcataagct 161  Q
    ||||| |||||||||||||||||| || ||||||||||||    
T  295910 aaacagcttatggacatgtcataactttttttcataagct 295871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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