View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4308-Insertion-4 (Length: 129)
Name: NF4308-Insertion-4
Description: NF4308
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4308-Insertion-4 |
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Alignment Details
Target: chr7 (Bit Score: 72; Significance: 4e-33; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 42823111 - 42823182
Alignment:
| Q |
37 |
cataactctcatattacaagagggtacatccgcacattttagtggaacactatgttttattttgaagaatga |
108 |
Q |
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| T |
42823111 |
cataactctcatattacaagagggtacatccgcacattttagtggaacactatgttttattttgaagaatga |
42823182 |
T |
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Target: chr4 (Bit Score: 68; Significance: 9e-31; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 68; E-Value: 9e-31
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 33072877 - 33072948
Alignment:
| Q |
37 |
cataactctcatattacaagagggtacatccgcacattttagtggaacactatgttttattttgaagaatga |
108 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
33072877 |
cataactctcatattacaagagggtacatccgcacattttagtggaacactatattttattttgaagaatga |
33072948 |
T |
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