View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4309_low_6 (Length: 366)
Name: NF4309_low_6
Description: NF4309
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4309_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 1 - 348
Target Start/End: Original strand, 26029578 - 26029931
Alignment:
| Q |
1 |
aaatgaaaactttgaattttgtctctaggctggatatagacacattgacactgctgctcagtatggagttcaagaagaggtatatatatcatatgctttc |
100 |
Q |
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| T |
26029578 |
aaatgaaaattttgaattttgtctttaggctggatatagacatattgacactgctgctcagtatggagttcaagaagaggtatatatatcatatgctttc |
26029677 |
T |
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| Q |
101 |
tgtttcata-taagttttaatttgttgattctggatataaattaaaaaataaataaatctgaattaatacgttactacaagattatagtatat-----ta |
194 |
Q |
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| T |
26029678 |
tgtttcatattaagttttaatttgttgattctggatataaattaaaaaataaataaatctgaattaatacgttactacaagattatagtatattaaagta |
26029777 |
T |
|
| Q |
195 |
aagtgattagtttcatataaa-agatagatgatgaaccaacaatagaatgatccaaagtggtttaatacgttaatataagattatcgaacttctgaccac |
293 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
26029778 |
aagtgattagtttcatataaagagatagatgatgaaccaacaatagaatgatcc-aagtggtttaatacgttaatacaagattatcgaacttctgaccac |
26029876 |
T |
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| Q |
294 |
cacatgctaagagccctaggtctaagtggtaacggacttggccccttagcatgca |
348 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26029877 |
cacatgctaagagccctaggtctaagtggtaacggacttggccccttagcatgca |
26029931 |
T |
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