View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4309_low_9 (Length: 308)
Name: NF4309_low_9
Description: NF4309
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4309_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 26029438 - 26029137
Alignment:
| Q |
1 |
taatctaatagcaggaatgctatgtccactcaaaagatcaaatgactttgtctttggttcatgtggcttaactgtttgtgccatttttaataaattcaat |
100 |
Q |
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| T |
26029438 |
taatccaatagcaggaatgctatgtccactcaacagatcaaatgactttgtctttggttcatgtggcttaactgtttgtgccatttttaataaattcaat |
26029339 |
T |
|
| Q |
101 |
gctttctaagataatgttaatttgtttcttgtgaatcatatgatataattataaccaaagagtctttgtggaataagcggacatgtaggagttcattgag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26029338 |
gctttctaagataatgttaatttgtttcttgtgaatcatatgatataattataaccaaagagtctttgtggaataagcggacatgtaggagttcattgag |
26029239 |
T |
|
| Q |
201 |
taacaaaacatgatacctatttgcatgctagatagtagacacgttcctttctattttagtctacgtgttctctttctaactcctttcttctcttcatctc |
300 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
26029238 |
taagaaaacatgatacctatttgcatgctagatagtagacacgttcctttctattttagtctacgtgttctcttcctaactcctttcttctcttcatctc |
26029139 |
T |
|
| Q |
301 |
ac |
302 |
Q |
| |
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|| |
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| T |
26029138 |
ac |
26029137 |
T |
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