View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4310-Insertion-18 (Length: 38)
Name: NF4310-Insertion-18
Description: NF4310
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4310-Insertion-18 |
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| [»] chr7 (1 HSPs) |
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| [»] scaffold0126 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 38; Significance: 0.0000000000001; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 36799027 - 36798990
Alignment:
| Q |
1 |
ccaacttcaagttctgaacatgaaggacctaaaacacc |
38 |
Q |
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| T |
36799027 |
ccaacttcaagttctgaacatgaaggacctaaaacacc |
36798990 |
T |
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Target: scaffold0126 (Bit Score: 33; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0126
Description:
Target: scaffold0126; HSP #1
Raw Score: 33; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 26091 - 26055
Alignment:
| Q |
2 |
caacttcaagttctgaacatgaaggacctaaaacacc |
38 |
Q |
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|||||||||||||||||||||||||||| |||||||| |
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| T |
26091 |
caacttcaagttctgaacatgaaggaccaaaaacacc |
26055 |
T |
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