View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4310_low_7 (Length: 310)
Name: NF4310_low_7
Description: NF4310
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4310_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 19 - 298
Target Start/End: Original strand, 30239911 - 30240186
Alignment:
| Q |
19 |
tacaggtagggtggtgatcataacccctatgagtgttttctactatgatatagaaggggacattattgatgaatataataatattatcacattcttcgat |
118 |
Q |
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| T |
30239911 |
tacaggtagggtggtgatcataacccctatgagtgttttctactatgatatagaaggggacattattgatgaatataataa---tatcacattcttcaat |
30240007 |
T |
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| Q |
119 |
ccactggcaatggcgatggatatagtaagttatattagaactttatcttccacttataatcattcagtggtagtgaatgnnnnnnnnnnnntgaaacacg |
218 |
Q |
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| T |
30240008 |
ccactggcaatggcgatggatatagtaagttatactagaactttatcttccactt-taatcattcagtggtagtgaatggaaaaataaaaatgaaacacg |
30240106 |
T |
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| Q |
219 |
tttttgcatccatttgtcacattgcatatttctttgcaaaaatagtagttaaaagtctctaggtagtaataaagtagtat |
298 |
Q |
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| T |
30240107 |
tttttgcatccatttgtcacattgcatatttctttgcaaaaatagtagttaaaagtctctaggtagtaataaagtagtat |
30240186 |
T |
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