View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4312-Insertion-9 (Length: 230)
Name: NF4312-Insertion-9
Description: NF4312
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4312-Insertion-9 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 6232816 - 6233041
Alignment:
| Q |
1 |
cggagttcctctcggttgccacttttcaccttgttctacacctatctctttcgcaaggccgaaatctgaaatcttaatgtttccgttctcgaatacgaga |
100 |
Q |
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| T |
6232816 |
cggagttcctctcggttgccacttttcaccttgttctacacctgtctctttcgcaagcccgaaatctgaaatcttaatgtttccgttctcgaatacgaga |
6232915 |
T |
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| Q |
101 |
atgttgggcaacttcaaatcacaatgaacaaacccttttttgtgaatatacttgagtccttcaactaccgacctcgtataattaacggcggacgaggtta |
200 |
Q |
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| T |
6232916 |
atgttgggcaacttcaaatcacaatgaacaaacccttttttgtgaatatacttgagtccttcaactaccgacctcgta----taacggcggacgaggtta |
6233011 |
T |
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| Q |
201 |
tccgggagcttaccaccatgtttctcgagt |
230 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
6233012 |
tccgggagcttaccaccatgtttctcgagt |
6233041 |
T |
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