View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4312_high_15 (Length: 269)
Name: NF4312_high_15
Description: NF4312
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4312_high_15 |
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Alignment Details
Target: chr2 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 18 - 260
Target Start/End: Original strand, 32767822 - 32768064
Alignment:
| Q |
18 |
tccataatgcacatttagtagtatcagttttgtcaagtagtggttaatgcatggtcaagacccttcttttgaagtaaccttgacccacttattattttgg |
117 |
Q |
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| T |
32767822 |
tccataatgcacatttagtagtatcagttttgtcaagtagtggttaatgcatggtcaagacccttcttttgaagtaaccttgacccacttattattttgg |
32767921 |
T |
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| Q |
118 |
ttatcattcaactttggagttaggatcataggataggatatcttatgtccttcttctctctttctattgaattgagtaaactcttgatgaagatgcagga |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
32767922 |
ttatcattcaactttggagttaggatcataggataggatatgttatgtccttcttctctctttctattgaattgagtaaactcttcatgaagatgcagga |
32768021 |
T |
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| Q |
218 |
ccacaccatgtttaacctatattagtattcaatgcatattctt |
260 |
Q |
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| T |
32768022 |
ccacaccatgtttaacctatattagtattcaatgcattttctt |
32768064 |
T |
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