View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4312_high_16 (Length: 246)

Name: NF4312_high_16
Description: NF4312
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4312_high_16
NF4312_high_16
[»] scaffold0561 (1 HSPs)
scaffold0561 (26-235)||(4268-4477)
[»] chr7 (16 HSPs)
chr7 (26-235)||(9641505-9641714)
chr7 (35-235)||(28388898-28389098)
chr7 (26-117)||(18081119-18081210)
chr7 (26-168)||(39293242-39293381)
chr7 (26-150)||(44306772-44306895)
chr7 (26-77)||(14276491-14276542)
chr7 (26-94)||(44306683-44306750)
chr7 (85-211)||(12182713-12182839)
chr7 (35-94)||(7285875-7285934)
chr7 (35-94)||(14276410-14276469)
chr7 (104-172)||(14278074-14278142)
chr7 (26-93)||(12246596-12246662)
chr7 (26-128)||(14252829-14252935)
chr7 (26-90)||(39293153-39293216)
chr7 (26-77)||(3136108-3136158)
chr7 (41-82)||(48623796-48623837)
[»] chr4 (24 HSPs)
chr4 (26-235)||(13595531-13595740)
chr4 (26-211)||(7966103-7966287)
chr4 (26-235)||(13448543-13448751)
chr4 (26-168)||(41918285-41918426)
chr4 (26-93)||(14570015-14570081)
chr4 (26-93)||(40902219-40902285)
chr4 (85-184)||(9650738-9650837)
chr4 (35-94)||(19699018-19699077)
chr4 (35-94)||(19709603-19709662)
chr4 (26-93)||(41918196-41918262)
chr4 (26-92)||(12346698-12346763)
chr4 (104-168)||(40902312-40902376)
chr4 (38-94)||(55378184-55378240)
chr4 (167-211)||(5407631-5407675)
chr4 (26-74)||(12336025-12336072)
chr4 (154-210)||(15852940-15852996)
chr4 (26-82)||(55378261-55378316)
chr4 (35-94)||(13448462-13448521)
chr4 (35-74)||(19699107-19699146)
chr4 (35-74)||(19709692-19709731)
chr4 (35-94)||(40902138-40902197)
chr4 (39-94)||(41918119-41918174)
chr4 (26-76)||(22737280-22737329)
chr4 (154-232)||(23271705-23271783)
[»] chr8 (20 HSPs)
chr8 (26-235)||(20708251-20708460)
chr8 (26-234)||(16000620-16000828)
chr8 (35-235)||(18262925-18263125)
chr8 (26-168)||(17500548-17500689)
chr8 (26-131)||(45468768-45468872)
chr8 (138-235)||(45476004-45476101)
chr8 (26-150)||(20177533-20177656)
chr8 (26-150)||(20222260-20222383)
chr8 (147-235)||(21233655-21233743)
chr8 (26-94)||(20177444-20177511)
chr8 (26-94)||(20222171-20222238)
chr8 (35-235)||(18617518-18617721)
chr8 (35-94)||(18610957-18611016)
chr8 (35-94)||(41508506-41508565)
chr8 (35-94)||(17500711-17500770)
chr8 (35-83)||(18617762-18617810)
chr8 (26-74)||(41508587-41508634)
chr8 (35-90)||(18262836-18262891)
chr8 (35-74)||(18610888-18610927)
chr8 (48-94)||(45468702-45468748)
[»] chr6 (18 HSPs)
chr6 (26-235)||(19670942-19671150)
chr6 (35-235)||(31469050-31469250)
chr6 (26-168)||(17084852-17084993)
chr6 (26-168)||(22594993-22595134)
chr6 (26-128)||(940658-940759)
chr6 (26-232)||(14151035-14151240)
chr6 (85-211)||(26523656-26523782)
chr6 (100-177)||(6093039-6093115)
chr6 (26-94)||(17084674-17084741)
chr6 (85-216)||(14671329-14671460)
chr6 (35-94)||(19628027-19628086)
chr6 (36-94)||(22594913-22594971)
chr6 (35-90)||(35010722-35010777)
chr6 (35-95)||(31468961-31469021)
chr6 (26-74)||(35010803-35010850)
chr6 (35-94)||(17084771-17084830)
chr6 (35-90)||(19671176-19671231)
chr6 (154-232)||(29664772-29664850)
[»] chr5 (11 HSPs)
chr5 (26-235)||(23235910-23236119)
chr5 (26-168)||(16836878-16837020)
chr5 (26-168)||(11764922-11765064)
chr5 (35-89)||(14343368-14343422)
chr5 (35-94)||(34938148-34938207)
chr5 (26-128)||(34938020-34938126)
chr5 (26-74)||(2030547-2030594)
chr5 (41-89)||(14343281-14343329)
chr5 (26-74)||(17908407-17908454)
chr5 (26-74)||(23985782-23985829)
chr5 (35-89)||(16836791-16836845)
[»] chr2 (17 HSPs)
chr2 (26-235)||(16294247-16294455)
chr2 (26-168)||(22331196-22331337)
chr2 (35-94)||(22255101-22255160)
chr2 (35-94)||(22331359-22331418)
chr2 (35-94)||(42179816-42179875)
chr2 (26-94)||(22331448-22331515)
chr2 (35-94)||(7513461-7513520)
chr2 (26-77)||(32464606-32464656)
chr2 (26-128)||(42179897-42180001)
chr2 (38-94)||(16294169-16294225)
chr2 (26-74)||(28032503-28032550)
chr2 (35-74)||(7513550-7513589)
chr2 (35-74)||(22255032-22255071)
chr2 (154-211)||(23823138-23823195)
chr2 (154-211)||(23825082-23825139)
chr2 (154-211)||(23832217-23832274)
chr2 (26-74)||(17203276-17203323)
[»] chr3 (13 HSPs)
chr3 (35-235)||(11636967-11637167)
chr3 (26-94)||(31413722-31413789)
chr3 (38-93)||(8603295-8603350)
chr3 (35-93)||(54039992-54040050)
chr3 (35-93)||(54049279-54049337)
chr3 (100-168)||(31413853-31413921)
chr3 (26-82)||(51962625-51962680)
chr3 (154-215)||(48420155-48420216)
chr3 (26-74)||(12903262-12903309)
chr3 (26-72)||(31413811-31413856)
chr3 (26-74)||(18738519-18738566)
chr3 (26-74)||(54040073-54040120)
chr3 (26-74)||(54049360-54049407)
[»] scaffold0148 (1 HSPs)
scaffold0148 (26-235)||(36359-36564)
[»] scaffold0165 (3 HSPs)
scaffold0165 (26-235)||(20580-20788)
scaffold0165 (26-235)||(28564-28772)
scaffold0165 (35-94)||(28794-28853)
[»] scaffold0009 (1 HSPs)
scaffold0009 (26-222)||(98488-98683)
[»] scaffold0133 (1 HSPs)
scaffold0133 (26-234)||(3212-3419)
[»] scaffold0700 (2 HSPs)
scaffold0700 (26-211)||(1071-1255)
scaffold0700 (38-94)||(1277-1333)
[»] scaffold0020 (2 HSPs)
scaffold0020 (38-211)||(104432-104604)
scaffold0020 (35-92)||(104639-104696)
[»] chr1 (3 HSPs)
chr1 (26-211)||(18164658-18164842)
chr1 (154-211)||(36357957-36358014)
chr1 (154-211)||(13378381-13378437)
[»] scaffold1068 (2 HSPs)
scaffold1068 (26-211)||(1731-1915)
scaffold1068 (36-94)||(1937-1995)
[»] scaffold0090 (2 HSPs)
scaffold0090 (26-168)||(36292-36432)
scaffold0090 (36-89)||(36208-36261)
[»] scaffold0409 (4 HSPs)
scaffold0409 (26-125)||(2641-2739)
scaffold0409 (26-125)||(10896-10994)
scaffold0409 (48-94)||(2573-2619)
scaffold0409 (48-94)||(10828-10874)
[»] scaffold0503 (1 HSPs)
scaffold0503 (26-124)||(10179-10276)
[»] scaffold0258 (1 HSPs)
scaffold0258 (85-211)||(8748-8874)
[»] scaffold0005 (1 HSPs)
scaffold0005 (26-93)||(247295-247361)
[»] scaffold0396 (1 HSPs)
scaffold0396 (92-168)||(101-177)
[»] scaffold0158 (2 HSPs)
scaffold0158 (35-94)||(23565-23624)
scaffold0158 (26-74)||(23496-23543)
[»] scaffold0335 (1 HSPs)
scaffold0335 (35-94)||(9459-9518)
[»] scaffold0686 (1 HSPs)
scaffold0686 (26-80)||(7429-7482)
[»] scaffold0138 (4 HSPs)
scaffold0138 (26-74)||(27949-27996)
scaffold0138 (26-74)||(39945-39992)
scaffold0138 (48-94)||(28018-28064)
scaffold0138 (48-94)||(40014-40060)
[»] scaffold0016 (1 HSPs)
scaffold0016 (26-82)||(167632-167687)
[»] scaffold0001 (2 HSPs)
scaffold0001 (26-74)||(165856-165903)
scaffold0001 (154-211)||(165999-166055)
[»] scaffold0132 (1 HSPs)
scaffold0132 (26-73)||(12528-12574)
[»] scaffold1486 (1 HSPs)
scaffold1486 (154-184)||(1540-1570)
[»] scaffold0892 (1 HSPs)
scaffold0892 (41-82)||(2513-2554)
[»] scaffold0066 (2 HSPs)
scaffold0066 (154-211)||(52838-52895)
scaffold0066 (154-186)||(44667-44699)
[»] scaffold0023 (1 HSPs)
scaffold0023 (154-211)||(58058-58115)
[»] scaffold0017 (1 HSPs)
scaffold0017 (41-82)||(42480-42521)
[»] scaffold0013 (1 HSPs)
scaffold0013 (104-168)||(10939-11003)


Alignment Details
Target: scaffold0561 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 26 - 235
Target Start/End: Original strand, 4268 - 4477
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcat 125  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||  | ||| ||||||||||||||||||||||| |||||||||| ||||||    
T  4268 catatgcatttgttgttgagtcatatgttcatgcattcatgactgatggtggcgaattttatatccaattgaggtgattatgatgttctgttgacatcat 4367  T
Q  126 ggggtgacaacttagaagttggtgacgacggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtcataatcgtgaaaat 225  Q
    ||||||||  | |||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||    
T  4368 ggggtgacggcctagacgttggtgacaacggtaccgcatgcatttaggtgtggtgtctagggacataccatgttgtggcatgagtcctaattgtgaaaat 4467  T
Q  226 aattgatata 235  Q
    ||||||||||    
T  4468 aattgatata 4477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 146; Significance: 5e-77; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 26 - 235
Target Start/End: Complemental strand, 9641714 - 9641505
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcat 125  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||| ||| | ||| ||||||||||||||||||||||| |||| ||||||| ||||    
T  9641714 catatgcatttgttgttgagtcatatgttcaagcattcatgactgatgatgacgaattttatatccaattgaggtgattatgatgttatgttggcctcat 9641615  T
Q  126 ggggtgacaacttagaagttggtgacgacggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtcataatcgtgaaaat 225  Q
    ||||||||  | |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  9641614 ggggtgacggcctagacgttggtgatgacggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtcctaattgtgaaaat 9641515  T
Q  226 aattgatata 235  Q
    ||||||||||    
T  9641514 aattgatata 9641505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 35 - 235
Target Start/End: Complemental strand, 28389098 - 28388898
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcatggggtgaca 134  Q
    ||||||| |||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||     
T  28389098 ttgttgtcgagtcatatgttcatgcattcatgactgatggtgacggattttatatccaattgaggtgattatggtgttctgttggcatcatggggcgacg 28388999  T
Q  135 acttagaagttggtgacgacggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtcataatcgtgaaaataattgatat 234  Q
     | |||| ||||||||||||||||||||||||||||| |||||||||||| || |||| ||| || ||||||||||| |||| |||||||||||||||||    
T  28388998 gcctagacgttggtgacgacggtaccgcatgcatttatgtgtcgtgtctatgggcatatcatattatggcatgagtcctaattgtgaaaataattgatat 28388899  T
Q  235 a 235  Q
    |    
T  28388898 a 28388898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 18081119 - 18081210
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgtt 117  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||    
T  18081119 catatgcatttgttgttgagtcatatgttcatggattcatgactgatggtgacggattttatatccaattgaggtgattatgatgttctgtt 18081210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 26 - 168
Target Start/End: Original strand, 39293242 - 39293381
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcat 125  Q
    |||||||||| ||||| |||||||||||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||| ||||| |||| ||||||    
T  39293242 catatgcatt-gttgtcgagtcatatgttcatgcattcatgactgatggtgacagattttatatccaattgaggtgattatgatgttcagttgacatcat 39293340  T
Q  126 ggggtgacaacttagaagttggtgacgacggtaccgcatgcat 168  Q
    ||||||||  | |||| ||||||||  | ||||||||||||||    
T  39293341 ggggtgacggcctagacgttggtga--atggtaccgcatgcat 39293381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 44306772 - 44306895
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcat 125  Q
    |||||||||| ||||| |||||||||||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||| ||||| |||| ||||||    
T  44306772 catatgcatt-gttgtcgagtcatatgttcatgcattcatgactgatggtgacagattttatatccaattgaggtgattatgatgttcagttgacatcat 44306870  T
Q  126 ggggtgacaacttagaagttggtga 150  Q
    ||| |||| || |||| ||||||||    
T  44306871 gggatgacgacctagacgttggtga 44306895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 14276491 - 14276542
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtga 77  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14276491 catatgcatttgttgttgagtcatatgttcatgcattcatgactgatggtga 14276542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 44306683 - 44306750
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    |||||||||| ||||||||| ||||||||||||||| ||||||||||||||||| ||| ||||||||||    
T  44306683 catatgcatt-gttgttgagacatatgtttatgcatacatgactgatggtgatgaattttatatccaat 44306750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 12182839 - 12182713
Alignment:
Q  85 tatatccaattgaggtgattatggtgttctgttggcatcatggggtgacaacttagaagttggtgacgacggtaccgcatgcatttaggtgtcgtgtcta 184  Q
    |||||| | |||||||||||||| |||  |||||||||||||||||||| || |||| |||| ||  || |||||| ||||||| |||| ||||||||||    
T  12182839 tatatctagttgaggtgattatgatgtgttgttggcatcatggggtgacgacctagacgttgttggtgatggtaccacatgcatgtaggagtcgtgtcta 12182740  T
Q  185 gggacataccatgttgtggcatgagtc 211  Q
    ||  |||   | |||||||||||||||    
T  12182739 ggagcattgtacgttgtggcatgagtc 12182713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 7285875 - 7285934
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    |||||||||||  |||||||||||||| ||||||||||||||| ||||| ||||||||||    
T  7285875 ttgttgttgagatatatgtttatgcatacatgactgatggtgacggattgtatatccaat 7285934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 14276410 - 14276469
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    |||||||||||  |||||||||||||| ||||||||||||||| ||||| ||||||||||    
T  14276410 ttgttgttgagatatatgtttatgcatacatgactgatggtgacggattttatatccaat 14276469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 14278074 - 14278142
Alignment:
Q  104 tatggtgttctgttggcatcatggggtgacaacttagaagttggtgacgacggtaccgcatgcatttag 172  Q
    |||| |||||||||||||||||||||||||  | || | |||||||| ||||||||| |||||||||||    
T  14278074 tatgatgttctgttggcatcatggggtgacggcctaaacgttggtgaagacggtaccacatgcatttag 14278142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 93
Target Start/End: Complemental strand, 12246662 - 12246596
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaa 93  Q
    |||||||||| |||||||||||||||||| |||||| ||||| |||||||||  |||| |||||||||    
T  12246662 catatgcatt-gttgttgagtcatatgttcatgcatacatgaatgatggtgacagattttatatccaa 12246596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 128
Target Start/End: Original strand, 14252829 - 14252935
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatgga-----ttctatatccaattgaggtgattatggtgttctgttggc 120  Q
    |||||||||| |||||||||||||||||| |||||| |||||||||||| || |||     || ||||||||| ||  | ||||||| |||||||| |||    
T  14252829 catatgcatt-gttgttgagtcatatgttcatgcatacatgactgatggagacggatatttttatatatccaaatggtgagattatgatgttctgtcggc 14252927  T
Q  121 atcatggg 128  Q
    ||||||||    
T  14252928 atcatggg 14252935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 39293153 - 39293216
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatc 90  Q
    |||||||||| ||||||||| ||||||||||||||| || |||||||| ||| ||||| ||||||    
T  39293153 catatgcatt-gttgttgagacatatgtttatgcatacacgactgatgatgacggattttatatc 39293216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 3136158 - 3136108
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtga 77  Q
    |||||||||| |||||||||||||||||| || || ||||||||||||||||    
T  3136158 catatgcatt-gttgttgagtcatatgttcatacaatcatgactgatggtga 3136108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 48623796 - 48623837
Alignment:
Q  41 ttgagtcatatgtttatgcattcatgactgatggtgatggat 82  Q
    |||||||||||||| |||||| |||||||||||| |||||||    
T  48623796 ttgagtcatatgttcatgcatacatgactgatggagatggat 48623837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 146; Significance: 5e-77; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 26 - 235
Target Start/End: Original strand, 13595531 - 13595740
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcat 125  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||| ||| | ||| ||||||||||||||||||||||| |||| ||||||| ||||    
T  13595531 catatgcatttgttgttgagtcatatgttcaagcattcatgactgatgatgacgaattttatatccaattgaggtgattatgatgttatgttggcctcat 13595630  T
Q  126 ggggtgacaacttagaagttggtgacgacggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtcataatcgtgaaaat 225  Q
    ||||||||  | |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  13595631 ggggtgacggcctagacgttggtgatgacggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtcctaattgtgaaaat 13595730  T
Q  226 aattgatata 235  Q
    ||||||||||    
T  13595731 aattgatata 13595740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 26 - 211
Target Start/End: Original strand, 7966103 - 7966287
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcat 125  Q
    |||||||||| ||||| |||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||    
T  7966103 catatgcatt-gttgtcgagtcatatgttcatgcattcatgactgatggtgacggattttatatccaattgaggtgattatgatgttctgttggcatcat 7966201  T
Q  126 ggggtgacaacttagaagttggtgacgacggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtc 211  Q
    ||||||||  | |||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||| |||| || ||||||    
T  7966202 ggggtgacggcctagacgttggtgacgacggtaccgcatgcatttatgtgtcgtgtttagggacatatcatattgttgcgtgagtc 7966287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 26 - 235
Target Start/End: Original strand, 13448543 - 13448751
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcat 125  Q
    |||||||||| ||||| |||||||||||| |||||||||||||||| |||||  |||| ||||| ||||||||||||||||| |||||||||||||||||    
T  13448543 catatgcatt-gttgtcgagtcatatgttcatgcattcatgactgacggtgacagattttatattcaattgaggtgattatgatgttctgttggcatcat 13448641  T
Q  126 ggggtgacaacttagaagttggtgacgacggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtcataatcgtgaaaat 225  Q
    ||||||||  | |||| ||||||||||||||||||||||||||||| | ||| |||||||||||||| ||| |||||||||||||| || | ||||||||    
T  13448642 ggggtgacggcctagacgttggtgacgacggtaccgcatgcatttatgcgtcatgtctagggacatatcatattgtggcatgagtcctagttgtgaaaat 13448741  T
Q  226 aattgatata 235  Q
    ||| ||||||    
T  13448742 aatggatata 13448751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 26 - 168
Target Start/End: Original strand, 41918285 - 41918426
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcat 125  Q
    |||||||||| ||||| |||||||||||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||| ||||| |||||||||||    
T  41918285 catatgcatt-gttgtcgagtcatatgttcatgcattcatgactgatggtgacagattttatatccaattgaggtgattatgatgttcagttggcatcat 41918383  T
Q  126 ggggtgacaacttagaagttggtgacgacggtaccgcatgcat 168  Q
    ||||||||  | |||| |||||||| |||| ||||||||||||    
T  41918384 ggggtgacggcctagacgttggtgatgacgataccgcatgcat 41918426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 93
Target Start/End: Complemental strand, 14570081 - 14570015
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaa 93  Q
    |||||||||| |||||||||||||||||| |||||| ||||||||||||||| ||||| |||||||||    
T  14570081 catatgcatt-gttgttgagtcatatgttcatgcatacatgactgatggtgacggattttatatccaa 14570015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 40902219 - 40902285
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaa 93  Q
    |||||||||| ||||| |||||||||||| |||||||||||||||||||||| ||||| |||||||||    
T  40902219 catatgcatt-gttgtcgagtcatatgttcatgcattcatgactgatggtgacggattttatatccaa 40902285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 184
Target Start/End: Complemental strand, 9650837 - 9650738
Alignment:
Q  85 tatatccaattgaggtgattatggtgttctgttggcatcatggggtgacaacttagaagttggtgacgacggtaccgcatgcatttaggtgtcgtgtcta 184  Q
    |||||||| |||| ||||||||| |||  ||||||||||||||||||||| | |||| |||| ||  |||||||||||||| || || | ||||||||||    
T  9650837 tatatccagttgatgtgattatgatgtgttgttggcatcatggggtgacagcctagacgttgttggtgacggtaccgcatgtatgtatgagtcgtgtcta 9650738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 19699018 - 19699077
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    |||||||||||  |||||||||||||| ||||||||||||||| ||||| ||||||||||    
T  19699018 ttgttgttgagatatatgtttatgcatacatgactgatggtgacggattttatatccaat 19699077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 19709603 - 19709662
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    |||||||||||  |||||||||||||| ||||||||||||||| ||||| ||||||||||    
T  19709603 ttgttgttgagatatatgtttatgcatacatgactgatggtgacggattttatatccaat 19709662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 41918196 - 41918262
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaa 93  Q
    |||||||||| |||||||||  |||||||||||||| ||||||||||||||| ||||| |||||||||    
T  41918196 catatgcatt-gttgttgagatatatgtttatgcatacatgactgatggtgacggattttatatccaa 41918262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 12346698 - 12346763
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatcca 92  Q
    |||||||||| |||||||||||||||||| ||||||||||||  |||||||| ||||| ||||||||    
T  12346698 catatgcatt-gttgttgagtcatatgttcatgcattcatgatcgatggtgacggattttatatcca 12346763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 40902312 - 40902376
Alignment:
Q  104 tatggtgttctgttggcatcatggggtgacaacttagaagttggtgacgacggtaccgcatgcat 168  Q
    |||| ||||| ||||||||||||||| |||  | |||| ||||||||||||||||||||||||||    
T  40902312 tatgatgttcagttggcatcatggggcgacggcctagacgttggtgacgacggtaccgcatgcat 40902376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 55378184 - 55378240
Alignment:
Q  38 ttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    ||||||||  |||||||||||||| ||||||||||||||| ||||| ||||||||||    
T  55378184 ttgttgaggtatatgtttatgcatacatgactgatggtgacggattgtatatccaat 55378240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 5407675 - 5407631
Alignment:
Q  167 atttaggtgtcgtgtctagggacataccatgttgtggcatgagtc 211  Q
    ||||| ||||| |||||||||||||||||| ||||||||||||||    
T  5407675 atttatgtgtcatgtctagggacataccatattgtggcatgagtc 5407631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 12336025 - 12336072
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatgg 74  Q
    |||||||||| |||||||| ||||||||| |||||||||||||||||||    
T  12336025 catatgcatt-gttgttgattcatatgttcatgcattcatgactgatgg 12336072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 15852940 - 15852996
Alignment:
Q  154 cggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagt 210  Q
    ||||||| |||||||||| ||||| |||||||||||||| ||| |||| ||||||||    
T  15852940 cggtaccacatgcatttatgtgtcatgtctagggacataacattttgttgcatgagt 15852996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 55378261 - 55378316
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggat 82  Q
    |||||||||| |||||||||||||| ||| |||||| ||||||||||||||| ||||    
T  55378261 catatgcatt-gttgttgagtcatacgttcatgcatacatgactgatggtgacggat 55378316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 13448462 - 13448521
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    |||||| ||||  |||||||||| ||| ||||||||||||||| ||||| ||||||||||    
T  13448462 ttgttgatgagatatatgtttatacatacatgactgatggtgacggattttatatccaat 13448521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 74
Target Start/End: Original strand, 19699107 - 19699146
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatgg 74  Q
    |||||||||||||||||||| |||||| ||||||||||||    
T  19699107 ttgttgttgagtcatatgttcatgcatacatgactgatgg 19699146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 74
Target Start/End: Original strand, 19709692 - 19709731
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatgg 74  Q
    |||||||||||||||||||| |||||| ||||||||||||    
T  19709692 ttgttgttgagtcatatgttcatgcatacatgactgatgg 19709731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 40902138 - 40902197
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    |||||||||||  |||||||||| ||| ||||||||||||| | ||||| ||||||||||    
T  40902138 ttgttgttgagatatatgtttatacatacatgactgatggttacggattttatatccaat 40902197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 41918119 - 41918174
Alignment:
Q  39 tgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    |||||||  |||||||||||||| ||||| ||||||||| ||||| ||||||||||    
T  41918119 tgttgagatatatgtttatgcatacatgattgatggtgacggattttatatccaat 41918174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 22737329 - 22737280
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtg 76  Q
    |||||||||| |||||||||||||||||| |||||| |||| |||||||||    
T  22737329 catatgcatt-gttgttgagtcatatgttcatgcatacatgcctgatggtg 22737280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 23271705 - 23271783
Alignment:
Q  154 cggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtcataatcgtgaaaataattgat 232  Q
    ||||||||||||||| ||||||| |||||||||  |||| ||||  ||| |||||||| || | |||||| ||||||||    
T  23271705 cggtaccgcatgcatataggtgttgtgtctaggatcatatcatgaggtgacatgagtcctagttgtgaaattaattgat 23271783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 142; Significance: 1e-74; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 26 - 235
Target Start/End: Complemental strand, 20708460 - 20708251
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcat 125  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||||||    
T  20708460 catatgcatttgttgttgagtcatgtgttcatgcattcatgactgatggtgacaaattttatatccaattgaggtgattatggtgttctgttggcatcat 20708361  T
Q  126 ggggtgacaacttagaagttggtgacgacggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtcataatcgtgaaaat 225  Q
    ||||||||  | |||| |||||||||||| ||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||  |||| ||||||||    
T  20708360 ggggtgacggcctagacgttggtgacgacagtaccgcatgcatttaggtatcgtgtctaggaacatatcatgttgtggcatgagttctaattgtgaaaat 20708261  T
Q  226 aattgatata 235  Q
    ||||||||||    
T  20708260 aattgatata 20708251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 26 - 234
Target Start/End: Complemental strand, 16000828 - 16000620
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcat 125  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||| || ||||| |||||||||||    
T  16000828 catatgcatttgttgttgagtcatatgttcatgcattcatgactgatggtgacggattttatatccaattgaggtgattgtgatgttcagttggcatcat 16000729  T
Q  126 ggggtgacaacttagaagttggtgacgacggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtcataatcgtgaaaat 225  Q
    ||||||||  | ||||  ||| ||| | |||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||| |||| ||||||||    
T  16000728 ggggtgacggcctagacattgttgatgtcggtacggcatgcatttaggtgtcgtgtctaggaacataccacgttgtggcatgagtcctaattgtgaaaat 16000629  T
Q  226 aattgatat 234  Q
    | |||||||    
T  16000628 atttgatat 16000620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 35 - 235
Target Start/End: Original strand, 18262925 - 18263125
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcatggggtgaca 134  Q
    ||||||| |||||||||||| ||||||||||||||||||||||   ||| |||||||||||||||||||||||||| ||||||||||||||||||||||     
T  18262925 ttgttgtcgagtcatatgttcatgcattcatgactgatggtgacatattttatatccaattgaggtgattatggtgctctgttggcatcatggggtgacg 18263024  T
Q  135 acttagaagttggtgacgacggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtcataatcgtgaaaataattgatat 234  Q
     | |||| |||||||||||||||||||||| |||||| |||||||||||||||||||| ||| |||||||||||||| |||| ||||||||  |||||||    
T  18263025 gcctagacgttggtgacgacggtaccgcatacatttatgtgtcgtgtctagggacatatcatattgtggcatgagtcttaattgtgaaaatggttgatat 18263124  T
Q  235 a 235  Q
    |    
T  18263125 a 18263125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 26 - 168
Target Start/End: Complemental strand, 17500689 - 17500548
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcat 125  Q
    |||||||||| ||||| |||||||||||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||| ||||| |||||||||||    
T  17500689 catatgcatt-gttgtcgagtcatatgttcatgcattcatgactgatggtgacagattttatatccaattgaggtgattatgatgttcagttggcatcat 17500591  T
Q  126 ggggtgacaacttagaagttggtgacgacggtaccgcatgcat 168  Q
    ||||||||  | |||| |||||||| |||||||||||||||||    
T  17500590 ggggtgacggcctagacgttggtgatgacggtaccgcatgcat 17500548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 45468768 - 45468872
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcat 125  Q
    |||||||||| ||||| |||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  45468768 catatgcatt-gttgtcgagtcatatgttcatgcattcatgactgatggtgacggattttatatccaattgaggtgattatggtgttctgttggcatcat 45468866  T
Q  126 ggggtg 131  Q
    ||||||    
T  45468867 ggggtg 45468872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 45476004 - 45476101
Alignment:
Q  138 tagaagttggtgacgacggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtcataatcgtgaaaataattgatata 235  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||| |||| ||| |||||||||||||| |||| ||||||||||||||||||    
T  45476004 tagacgttggtgacgacggtaccgcatgcatttatgtgtcgtgtctaggggcatatcatattgtggcatgagtcctaattgtgaaaataattgatata 45476101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 20177533 - 20177656
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcat 125  Q
    |||||||||| ||||| |||||||||||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||| ||||| |||| ||||||    
T  20177533 catatgcatt-gttgtcgagtcatatgttcatgcattcatgactgatggtgacagattttatatccaattgaggtgattatgatgttcagttgacatcat 20177631  T
Q  126 ggggtgacaacttagaagttggtga 150  Q
    ||| |||| || |||| ||||||||    
T  20177632 gggatgacgacctagacgttggtga 20177656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 20222260 - 20222383
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcat 125  Q
    |||||||||| ||||| |||||||||||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||| ||||| |||| ||||||    
T  20222260 catatgcatt-gttgtcgagtcatatgttcatgcattcatgactgatggtgacagattttatatccaattgaggtgattatgatgttcagttgacatcat 20222358  T
Q  126 ggggtgacaacttagaagttggtga 150  Q
    ||| |||| || |||| ||||||||    
T  20222359 gggatgacgacctagacgttggtga 20222383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 147 - 235
Target Start/End: Original strand, 21233655 - 21233743
Alignment:
Q  147 gtgacgacggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtcataatcgtgaaaataattgatata 235  Q
    ||||||||||||||||||||||||| ||||| ||||||||| |||| ||| |||||||||||||| ||||  |||||||||||||||||    
T  21233655 gtgacgacggtaccgcatgcatttatgtgtcatgtctaggggcatatcatattgtggcatgagtcctaattttgaaaataattgatata 21233743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 20177444 - 20177511
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    |||||||||| ||||||||| ||||||||||||||| ||||||||||||||||| ||| ||||||||||    
T  20177444 catatgcatt-gttgttgagacatatgtttatgcatacatgactgatggtgatgaattttatatccaat 20177511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 20222171 - 20222238
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    |||||||||| ||||||||| ||||||||||||||| ||||||||||||||||| ||| ||||||||||    
T  20222171 catatgcatt-gttgttgagacatatgtttatgcatacatgactgatggtgatgaattttatatccaat 20222238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 235
Target Start/End: Complemental strand, 18617721 - 18617518
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggat-----tctatatccaattgaggtgattatggtgttctgttggcatcatgggg 129  Q
    |||||||||||||||||||| |||||| |||||||||||| || | ||     | ||||||||| ||  | ||||||| |||||||  |||||||||||     
T  18617721 ttgttgttgagtcatatgttcatgcatacatgactgatggagacgaatatttttatatatccaaatggtgagattatgatgttctgccggcatcatgggc 18617622  T
Q  130 tgacaacttagaagttggtgacgacggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtcataatcgtgaaaataatt 229  Q
     ||| || || |  |||||||   |||||||||||||||||||  || |||||||||  |||| |||||||||||||||||| || | |||||| || ||    
T  18617621 -gacgacctaaatattggtgagatcggtaccgcatgcatttaga-gttgtgtctaggatcatatcatgttgtggcatgagtcctagttgtgaaattactt 18617524  T
Q  230 gatata 235  Q
    ||||||    
T  18617523 gatata 18617518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 18611016 - 18610957
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    |||||||||||  |||||||||||||| ||||||||||||||| ||||| ||||||||||    
T  18611016 ttgttgttgagatatatgtttatgcatacatgactgatggtgacggattttatatccaat 18610957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 41508506 - 41508565
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    |||||||||||  |||||||||||||| ||||||||||||||| ||||| ||||||||||    
T  41508506 ttgttgttgagatatatgtttatgcatacatgactgatggtgacggattttatatccaat 41508565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 17500770 - 17500711
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    |||||||||||  |||||||||| ||| ||||||||||||||| ||||| ||||||||||    
T  17500770 ttgttgttgagatatatgtttatacatacatgactgatggtgacggattttatatccaat 17500711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 18617810 - 18617762
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggatt 83  Q
    |||||||||||  |||||||||||||| ||||||||||||||| |||||    
T  18617810 ttgttgttgagatatatgtttatgcatacatgactgatggtgacggatt 18617762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 41508587 - 41508634
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatgg 74  Q
    |||||||||| |||||||||||||||||| |||||| ||||||||||||    
T  41508587 catatgcatt-gttgttgagtcatatgttcatgcatacatgactgatgg 41508634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 18262836 - 18262891
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatc 90  Q
    |||||||||||  |||||||||| ||| ||||||||||||||| ||||| ||||||    
T  18262836 ttgttgttgagatatatgtttatacatgcatgactgatggtgacggattttatatc 18262891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 74
Target Start/End: Complemental strand, 18610927 - 18610888
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatgg 74  Q
    |||||||||||||||||||| |||||| ||||||||||||    
T  18610927 ttgttgttgagtcatatgttcatgcatacatgactgatgg 18610888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 45468702 - 45468748
Alignment:
Q  48 atatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    |||||||||| ||| ||||||||||||||| ||||| ||||||||||    
T  45468702 atatgtttatacatacatgactgatggtgacggattttatatccaat 45468748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 142; Significance: 1e-74; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 26 - 235
Target Start/End: Complemental strand, 19671150 - 19670942
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcat 125  Q
    |||||||||| ||||| |||| ||||||| ||||||||||||||| | |||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  19671150 catatgcatt-gttgtcgagttatatgttcatgcattcatgactgttcgtgacggattttatatccaattgaggtgattatggtgttctgttggcatcat 19671052  T
Q  126 ggggtgacaacttagaagttggtgacgacggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtcataatcgtgaaaat 225  Q
    |||||||| || |||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||| |||| ||||||||    
T  19671051 ggggtgacgacctagacgttggtgacgacggtaccgcatgcatttatgtgtcgtgtctagggacatatcatattgtggcatgagtcctaattgtgaaaat 19670952  T
Q  226 aattgatata 235  Q
    ||||||||||    
T  19670951 aattgatata 19670942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 35 - 235
Target Start/End: Original strand, 31469050 - 31469250
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcatggggtgaca 134  Q
    ||||||| |||||||||||| |||||||||||| |||||||||  |||| | |||| |||||||||||||||||||||||||||||||||| |||||||     
T  31469050 ttgttgtcgagtcatatgttcatgcattcatgattgatggtgacagattttttatctaattgaggtgattatggtgttctgttggcatcatagggtgacg 31469149  T
Q  135 acttagaagttggtgacgacggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtcataatcgtgaaaataattgatat 234  Q
     | |||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||| |||| ||| |||||||||||||    
T  31469150 gcctagacgttggtgacgacggtaccgcatgcatttatgtgtcgtgtctagggacatatcatattgtggcatgagtcctaattgtggaaataattgatat 31469249  T
Q  235 a 235  Q
    |    
T  31469250 a 31469250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 26 - 168
Target Start/End: Original strand, 17084852 - 17084993
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcat 125  Q
    |||||||||| ||||| |||||||||||| ||||||||||||||||||||||  |||| ||| ||||||||||||||||||| ||||||||||| |||||    
T  17084852 catatgcatt-gttgtcgagtcatatgttcatgcattcatgactgatggtgacagattttatttccaattgaggtgattatgatgttctgttggaatcat 17084950  T
Q  126 ggggtgacaacttagaagttggtgacgacggtaccgcatgcat 168  Q
    ||||||||  | ||||  |||||||||||||||||||||||||    
T  17084951 ggggtgacggcctagacattggtgacgacggtaccgcatgcat 17084993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 26 - 168
Target Start/End: Original strand, 22594993 - 22595134
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcat 125  Q
    |||||||||| ||||| |||||||||||| |||||||||||||||| |||||  || | ||||||||||||||||||||||| ||||| ||||| |||||    
T  22594993 catatgcatt-gttgtcgagtcatatgttcatgcattcatgactgaaggtgacagaatttatatccaattgaggtgattatgatgttcagttggaatcat 22595091  T
Q  126 ggggtgacaacttagaagttggtgacgacggtaccgcatgcat 168  Q
    |||||||| || |||| |||||||| |||||||||||||||||    
T  22595092 ggggtgacgacctagacgttggtgaagacggtaccgcatgcat 22595134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 26 - 128
Target Start/End: Original strand, 940658 - 940759
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcat 125  Q
    |||||||||| ||||| |||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||    
T  940658 catatgcatt-gttgtcgagtcatatgttcatgcattcatgactgatggtgacagattctatatccaattgaggtgattatgatgttctgttggcatcat 940756  T
Q  126 ggg 128  Q
    |||    
T  940757 ggg 940759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 26 - 232
Target Start/End: Complemental strand, 14151240 - 14151035
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattct-atatccaattgaggtgattatggtgttctgttggcatca 124  Q
    |||||||||| |||||||||||||||||| |||||| |||||||  ||| || ||||| | |||||||| ||  | |||| || |||| ||| |||||||    
T  14151240 catatgcatt-gttgttgagtcatatgttcatgcatacatgactagtggagacggatttttatatccaaatggtgggattttgatgttttgtcggcatca 14151142  T
Q  125 tggggtgacaacttagaagttggtgacgacggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtcataatcgtgaaaa 224  Q
    ||||  ||| || || |  |||||||   ||||||||||||||| |||||||||||||||||  |||| |||||||||||||||||  || | |||||||    
T  14151141 tgggc-gacgacctaaatattggtgagaccggtaccgcatgcatataggtgtcgtgtctaggatcatatcatgttgtggcatgagtgctagttgtgaaaa 14151043  T
Q  225 taattgat 232  Q
    || |||||    
T  14151042 tatttgat 14151035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 85 - 211
Target Start/End: Original strand, 26523656 - 26523782
Alignment:
Q  85 tatatccaattgaggtgattatggtgttctgttggcatcatggggtgacaacttagaagttggtgacgacggtaccgcatgcatttaggtgtcgtgtcta 184  Q
    ||||||||||||||||| ||||| |||  |||||||||||||| |||||    |||| |||| ||  ||||||||||||||||| || | ||||||||||    
T  26523656 tatatccaattgaggtgtttatgatgtgttgttggcatcatggagtgacggtctagacgttgttggtgacggtaccgcatgcatgtaagagtcgtgtcta 26523755  T
Q  185 gggacataccatgttgtggcatgagtc 211  Q
    || |||||  |||||||||||||||||    
T  26523756 ggaacatagtatgttgtggcatgagtc 26523782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 100 - 177
Target Start/End: Complemental strand, 6093115 - 6093039
Alignment:
Q  100 tgattatggtgttctgttggcatcatggggtgacaacttagaagttggtgacgacggtaccgcatgcatttaggtgtc 177  Q
    |||||||| |||||| ||||||||||||||||||  | |||| ||||||||||||||||||||||||||||| |||||    
T  6093115 tgattatgatgttct-ttggcatcatggggtgacggcctagacgttggtgacgacggtaccgcatgcatttatgtgtc 6093039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 17084674 - 17084741
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    |||||||||| ||||||||| ||||||||||||||| |||||||||||||||  |||| ||||||||||    
T  17084674 catatgcatt-gttgttgagacatatgtttatgcatacatgactgatggtgacagattttatatccaat 17084741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 216
Target Start/End: Complemental strand, 14671460 - 14671329
Alignment:
Q  85 tatatccaattgaggtgattatggtgttctgttggcatcatggggtgacaacttagaagttggtgacgacggtaccgcatgcatttaggtgtcgtgtcta 184  Q
    |||||||| ||||||| || ||| |||| |||||| |||||||||||||  | |||| |||| ||  | |||||| |||||||| ||||||||||| |||    
T  14671460 tatatccagttgaggtcataatgatgttgtgttggtatcatggggtgacggcctagacgttgttggtgtcggtactgcatgcatataggtgtcgtgccta 14671361  T
Q  185 gggacataccatgttgtggcatgagtcataat 216  Q
    ||  |||| |||||| || |||||||| ||||    
T  14671360 ggtgcataacatgttttgacatgagtcctaat 14671329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 19628086 - 19628027
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    |||||||||||  |||||||||||||| ||||||||||||||| ||||| ||||||||||    
T  19628086 ttgttgttgagatatatgtttatgcatacatgactgatggtgacggattttatatccaat 19628027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 22594913 - 22594971
Alignment:
Q  36 tgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    |||||||||| || |||||||||||| ||||||||||||||| ||||| ||||||||||    
T  22594913 tgttgttgagacaaatgtttatgcatacatgactgatggtgacggattttatatccaat 22594971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 35010722 - 35010777
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatc 90  Q
    |||||||||||  |||||||||||||| ||||||||||||||| ||||| ||||||    
T  35010722 ttgttgttgagatatatgtttatgcatacatgactgatggtgacggattttatatc 35010777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 31468961 - 31469021
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaatt 95  Q
    |||||||||||  |||||||||| ||| ||||||||||||||| | ||| |||||||||||    
T  31468961 ttgttgttgagatatatgtttatacatacatgactgatggtgacgaattttatatccaatt 31469021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 35010803 - 35010850
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatgg 74  Q
    |||||||||| |||||||||||||||||| |||||| ||||||||||||    
T  35010803 catatgcatt-gttgttgagtcatatgttcatgcatacatgactgatgg 35010850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 17084771 - 17084830
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    |||||||||||  |||||||||||||| ||||| |||| |||| ||||| ||||||||||    
T  17084771 ttgttgttgagatatatgtttatgcatacatgaatgattgtgacggattttatatccaat 17084830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 19671231 - 19671176
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatc 90  Q
    |||||||||||  |||||||||| ||| ||||||||||||||| ||||| ||||||    
T  19671231 ttgttgttgagatatatgtttatacatacatgactgatggtgacggattttatatc 19671176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 29664850 - 29664772
Alignment:
Q  154 cggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtcataatcgtgaaaataattgat 232  Q
    ||||||||||||||| |||||||||||||||||  |||| ||||  ||| |||||||| || | |||||| || |||||    
T  29664850 cggtaccgcatgcatataggtgtcgtgtctaggatcatatcatgaggtgacatgagtcctagttgtgaaattacttgat 29664772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 142; Significance: 1e-74; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 26 - 235
Target Start/End: Original strand, 23235910 - 23236119
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcat 125  Q
    |||||||||||||| ||||||||| |||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  23235910 catatgcatttgttattgagtcatctgttcatgcattcatgactgatggtgacggattttatatccaattgaggtgattatggtgttctgttggcatcat 23236009  T
Q  126 ggggtgacaacttagaagttggtgacgacggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtcataatcgtgaaaat 225  Q
    ||||||||  | |||| ||||||||| ||||||||||||||||||||||||  |||||||| || ||||||||||||||||||||  |||| ||||||||    
T  23236010 ggggtgacggcctagacgttggtgacaacggtaccgcatgcatttaggtgttatgtctaggaacttaccatgttgtggcatgagttctaattgtgaaaat 23236109  T
Q  226 aattgatata 235  Q
    ||||||||||    
T  23236110 aattgatata 23236119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 26 - 168
Target Start/End: Original strand, 16836878 - 16837020
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcat 125  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| |||||||||||    
T  16836878 catatgcattagttgttgagtcatatgttcatgcattcatgactgatggtgacggattttatatccaattgaggtgattatgatgttcagttggcatcat 16836977  T
Q  126 ggggtgacaacttagaagttggtgacgacggtaccgcatgcat 168  Q
    ||||||||  | |||| |||||||| |||||||| ||||||||    
T  16836978 ggggtgacggcctagacgttggtgatgacggtactgcatgcat 16837020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 26 - 168
Target Start/End: Original strand, 11764922 - 11765064
Alignment:
Q  26 catatgcatttgttgtt-gagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatca 124  Q
    |||||||||| |||||| ||| |||||||| ||||||||||||||||||||||   ||| |||||||| |||||||||||||| ||||| ||||||||||    
T  11764922 catatgcatt-gttgttagagacatatgttcatgcattcatgactgatggtgacatattttatatccagttgaggtgattatgatgttcagttggcatca 11765020  T
Q  125 tggggtgacaacttagaagttggtgacgacggtaccgcatgcat 168  Q
    |||||||||  | |||| |||| ||| | |||||||||||||||    
T  11765021 tggggtgacggcctagacgttgttgatgtcggtaccgcatgcat 11765064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 14343368 - 14343422
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatat 89  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||| |||||    
T  14343368 ttgttgttgagtcatatgttcatgcattcatgactgatggtgacggattttatat 14343422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 34938207 - 34938148
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    |||||||||||  |||||||||||||| ||||||||||||||| ||||| ||||||||||    
T  34938207 ttgttgttgagatatatgtttatgcatacatgactgatggtgacggattttatatccaat 34938148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 128
Target Start/End: Complemental strand, 34938126 - 34938020
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatgga-----ttctatatccaattgaggtgattatggtgttctgttggc 120  Q
    |||||||||| |||||||||||||||||| |||||| |||||||||||| || |||     || ||||||||| ||  | ||||||| |||||||| |||    
T  34938126 catatgcatt-gttgttgagtcatatgttcatgcatacatgactgatggagacggatatttttatatatccaaatggtgagattatgatgttctgtcggc 34938028  T
Q  121 atcatggg 128  Q
    ||||||||    
T  34938027 atcatggg 34938020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 2030594 - 2030547
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatgg 74  Q
    |||||||||| |||||||||||||||||| |||||| ||||||||||||    
T  2030594 catatgcatt-gttgttgagtcatatgttcatgcatacatgactgatgg 2030547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 14343281 - 14343329
Alignment:
Q  41 ttgagtcatatgtttatgcattcatgactgatggtgatggattctatat 89  Q
    ||||| ||||||||||||||| ||||||||||||||||| ||| |||||    
T  14343281 ttgagacatatgtttatgcatacatgactgatggtgatgaattttatat 14343329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 17908454 - 17908407
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatgg 74  Q
    |||||||||| |||||||||||||||||| |||||| ||||||||||||    
T  17908454 catatgcatt-gttgttgagtcatatgttcatgcatacatgactgatgg 17908407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 23985782 - 23985829
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatgg 74  Q
    |||||||||| |||||||||||||||||| |||||| ||||||||||||    
T  23985782 catatgcatt-gttgttgagtcatatgttcatgcatacatgactgatgg 23985829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 16836791 - 16836845
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatat 89  Q
    ||||||||| | ||||||| ||| ||| ||||||||||||||||||||| |||||    
T  16836791 ttgttgttgtgacatatgtgtatacatacatgactgatggtgatggattttatat 16836845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 3e-72; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 26 - 235
Target Start/End: Original strand, 16294247 - 16294455
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcat 125  Q
    |||||||||| ||||| |||||||||||| ||||||||||||||||||||||  |||  |||||||||||||||||||||||||||||||||||||||||    
T  16294247 catatgcatt-gttgtcgagtcatatgttcatgcattcatgactgatggtgacagatgttatatccaattgaggtgattatggtgttctgttggcatcat 16294345  T
Q  126 ggggtgacaacttagaagttggtgacgacggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtcataatcgtgaaaat 225  Q
    ||||||||  | |||| ||||||||||||||||||||||||||||| ||||||||||||||| |||| ||| |||||||||||||| |||| ||||||||    
T  16294346 ggggtgacggcctagacgttggtgacgacggtaccgcatgcatttatgtgtcgtgtctaggggcatatcatattgtggcatgagtcctaattgtgaaaat 16294445  T
Q  226 aattgatata 235  Q
    ||||||||||    
T  16294446 aattgatata 16294455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 26 - 168
Target Start/End: Complemental strand, 22331337 - 22331196
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcat 125  Q
    |||||||||| ||||| |||||||||||| |||||||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||| |||||||||||    
T  22331337 catatgcatt-gttgtcgagtcatatgttcatgcattcatgactgacggtgacggattttatatccaattgaggtgattatgatgttcagttggcatcat 22331239  T
Q  126 ggggtgacaacttagaagttggtgacgacggtaccgcatgcat 168  Q
    |||||||| || |||| |||||||| |||||||||||||||||    
T  22331238 ggggtgacgacctagacgttggtgatgacggtaccgcatgcat 22331196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 22255160 - 22255101
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    |||||||||||  |||||||||||||| ||||||||||||||| ||||| ||||||||||    
T  22255160 ttgttgttgagatatatgtttatgcatacatgactgatggtgacggattttatatccaat 22255101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 22331418 - 22331359
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    |||||||||||  |||||||||||||| ||||||||||||||| ||||| ||||||||||    
T  22331418 ttgttgttgagatatatgtttatgcatacatgactgatggtgacggattttatatccaat 22331359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 42179816 - 42179875
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    |||||||||||  |||||||||||||| ||||||||||||||| ||||| ||||||||||    
T  42179816 ttgttgttgagatatatgtttatgcatacatgactgatggtgacggattttatatccaat 42179875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 22331515 - 22331448
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    |||||||||| ||||||||| ||||||||||||||| |||||||||||||||   ||| ||||||||||    
T  22331515 catatgcatt-gttgttgagccatatgtttatgcatacatgactgatggtgacaaattttatatccaat 22331448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 7513461 - 7513520
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    |||||||||||  |||||||||||||| ||||||||||||||| | ||| ||||||||||    
T  7513461 ttgttgttgagaaatatgtttatgcatacatgactgatggtgacgaattttatatccaat 7513520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 32464656 - 32464606
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtga 77  Q
    |||||||||| |||||||||||||||||| |||||| |||||||||||||||    
T  32464656 catatgcatt-gttgttgagtcatatgttcatgcatacatgactgatggtga 32464606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 128
Target Start/End: Original strand, 42179897 - 42180001
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatgga---ttctatatccaattgaggtgattatggtgttctgttggcat 122  Q
    |||||||||| |||||||||||||||||| |||||| |||||||||||| ||  ||   || ||||||||| ||  | ||||||| |||||||| |||||    
T  42179897 catatgcatt-gttgttgagtcatatgttcatgcatacatgactgatggagacagatatttttatatccaaatggtgagattatgatgttctgtcggcat 42179995  T
Q  123 catggg 128  Q
    ||||||    
T  42179996 catggg 42180001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 16294169 - 16294225
Alignment:
Q  38 ttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    ||||||||  |||||||||| ||| ||||||||||||||| ||||| ||||||||||    
T  16294169 ttgttgagatatatgtttatacatacatgactgatggtgacggattttatatccaat 16294225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 28032503 - 28032550
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatgg 74  Q
    |||||||||| |||||||||||||||||| |||||| ||||||||||||    
T  28032503 catatgcatt-gttgttgagtcatatgttcatgcatacatgactgatgg 28032550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 74
Target Start/End: Original strand, 7513550 - 7513589
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatgg 74  Q
    |||||||||||||||||||| |||||| ||||||||||||    
T  7513550 ttgttgttgagtcatatgttcatgcatacatgactgatgg 7513589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 74
Target Start/End: Complemental strand, 22255071 - 22255032
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatgg 74  Q
    |||||||||||||||||||| |||||| ||||||||||||    
T  22255071 ttgttgttgagtcatatgttcatgcatacatgactgatgg 22255032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 23823138 - 23823195
Alignment:
Q  154 cggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtc 211  Q
    ||||||| |||||||||| ||||| |||||||||||||| ||| |||| ||| |||||    
T  23823138 cggtaccacatgcatttatgtgtcatgtctagggacataacattttgttgcacgagtc 23823195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 23825082 - 23825139
Alignment:
Q  154 cggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtc 211  Q
    ||||||| |||||||||| ||||| |||||||||||||| ||| |||| ||| |||||    
T  23825082 cggtaccacatgcatttatgtgtcatgtctagggacataacattttgttgcacgagtc 23825139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 23832217 - 23832274
Alignment:
Q  154 cggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtc 211  Q
    ||||||| |||||||||| ||||| |||||||||||||| ||| |||| ||| |||||    
T  23832217 cggtaccacatgcatttatgtgtcatgtctagggacataacattttgttgcacgagtc 23832274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 17203323 - 17203276
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatgg 74  Q
    |||||||||| |||||||||||||||||| |||||| ||||| ||||||    
T  17203323 catatgcatt-gttgttgagtcatatgttcatgcatacatgagtgatgg 17203276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 133; Significance: 3e-69; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 35 - 235
Target Start/End: Complemental strand, 11637167 - 11636967
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcatggggtgaca 134  Q
    ||||||| |||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||     
T  11637167 ttgttgtcgagtcatatgttcatgcattcatgactgatggtgacggattttatatccaattgaggtgattatggtgttatgttggcatcatggggtgacg 11637068  T
Q  135 acttagaagttggtgacgacggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtcataatcgtgaaaataattgatat 234  Q
     | |||| |||||||| |||||||| ||||||||||| ||||||||||||||| |||| ||| |||||||||||||| |||| |||||||||||||||||    
T  11637067 gcctagacgttggtgatgacggtactgcatgcatttatgtgtcgtgtctaggggcatatcatattgtggcatgagtcctaattgtgaaaataattgatat 11636968  T
Q  235 a 235  Q
    |    
T  11636967 a 11636967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 31413722 - 31413789
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    |||||||||| ||||||||| ||||||||||||||| ||||||||||||||| ||||| ||||||||||    
T  31413722 catatgcatt-gttgttgagacatatgtttatgcatacatgactgatggtgacggattttatatccaat 31413789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 8603350 - 8603295
Alignment:
Q  38 ttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaa 93  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||    
T  8603350 ttgttgagacatatgtttatgcattcatgactgatggtgacggattttatatccaa 8603295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 93
Target Start/End: Original strand, 54039992 - 54040050
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaa 93  Q
    |||||||||||  |||||||||||||| ||||||||||||||| ||||| |||||||||    
T  54039992 ttgttgttgagatatatgtttatgcatacatgactgatggtgacggattttatatccaa 54040050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 93
Target Start/End: Original strand, 54049279 - 54049337
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaa 93  Q
    |||||||||||  |||||||||||||| ||||||||||||||| ||||| |||||||||    
T  54049279 ttgttgttgagatatatgtttatgcatacatgactgatggtgacggattttatatccaa 54049337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 168
Target Start/End: Original strand, 31413853 - 31413921
Alignment:
Q  100 tgattatggtgttctgttggcatcatggggtgacaacttagaagttggtgacgacggtaccgcatgcat 168  Q
    |||||||| ||||| |||||||||||||||||| | | ||||  ||||||| |||||||||||||||||    
T  31413853 tgattatgatgttcagttggcatcatggggtgatagcctagacattggtgatgacggtaccgcatgcat 31413921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 51962625 - 51962680
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggat 82  Q
    |||||||||| |||||||||||||||||| |||||| |||||||||||| |||||||    
T  51962625 catatgcatt-gttgttgagtcatatgttcatgcatacatgactgatggagatggat 51962680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 48420216 - 48420155
Alignment:
Q  154 cggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtcataa 215  Q
    ||||||| |||||||||| ||||| ||| |||||||||| ||| |||| |||||||||||||    
T  48420216 cggtaccacatgcatttatgtgtcatgtttagggacataacattttgttgcatgagtcataa 48420155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 12903262 - 12903309
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatgg 74  Q
    |||||||||| |||||||||||||||||| |||||| ||||||||||||    
T  12903262 catatgcatt-gttgttgagtcatatgttcatgcatacatgactgatgg 12903309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 31413811 - 31413856
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgat 72  Q
    |||||||||| ||||| |||||||||||| |||||||||||||||||    
T  31413811 catatgcatt-gttgtcgagtcatatgttcatgcattcatgactgat 31413856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 18738566 - 18738519
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatgg 74  Q
    |||||||||| ||| |||||||||||||| |||||| ||||||||||||    
T  18738566 catatgcatt-gttattgagtcatatgttcatgcatacatgactgatgg 18738519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 54040073 - 54040120
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatgg 74  Q
    |||||||||| |||||||||||||||||| || ||| ||||||||||||    
T  54040073 catatgcatt-gttgttgagtcatatgttcatacatacatgactgatgg 54040120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 54049360 - 54049407
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatgg 74  Q
    |||||||||| |||||||||||||||||| || ||| ||||||||||||    
T  54049360 catatgcatt-gttgttgagtcatatgttcatacatacatgactgatgg 54049407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 26 - 235
Target Start/End: Complemental strand, 36564 - 36359
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcat 125  Q
    |||||||||| ||||| |||||||||||| ||||||||||||||||||||||  |||| |||||| ||||||||||||||||||||||||||||||||||    
T  36564 catatgcatt-gttgtcgagtcatatgttcatgcattcatgactgatggtgacagattttatatctaattgaggtgattatggtgttctgttggcatcat 36466  T
Q  126 ggggtgacaacttagaagttggtgacgacggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtcataatcgtgaaaat 225  Q
    ||||||||  | ||| ||||||||||||||||||||| |||||||  |||||||||||||||||||| ||| |||||||||||||||||||  |||||||    
T  36465 ggggtgacggcctag-agttggtgacgacggtaccgcgtgcattt--gtgtcgtgtctagggacatatcatattgtggcatgagtcataattttgaaaat 36369  T
Q  226 aattgatata 235  Q
    ||||||||||    
T  36368 aattgatata 36359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 126; Significance: 4e-65; HSPs: 3)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 26 - 235
Target Start/End: Complemental strand, 20788 - 20580
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcat 125  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||| ||||||||||||    
T  20788 catatgcatt-gttgttgagtcatatgttcatgcattcatgactgatggtgacagattttatatccaattgaggtgattatgatgttttgttggcatcat 20690  T
Q  126 ggggtgacaacttagaagttggtgacgacggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtcataatcgtgaaaat 225  Q
    ||||||||    |||| |||| |||||||||||||||||||||||| ||||||||| ||||| |||| ||| |||||||||||||| |||| ||||||||    
T  20689 ggggtgacgggctagacgttgttgacgacggtaccgcatgcatttatgtgtcgtgtataggggcatatcatattgtggcatgagtcctaattgtgaaaat 20590  T
Q  226 aattgatata 235  Q
    ||||||||||    
T  20589 aattgatata 20580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 26 - 235
Target Start/End: Complemental strand, 28772 - 28564
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcat 125  Q
    |||||||||| ||||| |||||||||||| ||||||||||||||||||||||  |||  ||||||||||| |||||||||||||||||||||||||||||    
T  28772 catatgcatt-gttgtcgagtcatatgttcatgcattcatgactgatggtgacagatattatatccaattaaggtgattatggtgttctgttggcatcat 28674  T
Q  126 ggggtgacaacttagaagttggtgacgacggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtcataatcgtgaaaat 225  Q
     |||||||  | |||| |||||||||||||||||| |||||||||| ||||||||||||||| |||| ||| |||||||||||||| |||| ||||||||    
T  28673 cgggtgacggcctagacgttggtgacgacggtaccacatgcatttatgtgtcgtgtctagggccatatcatattgtggcatgagtcctaattgtgaaaat 28574  T
Q  226 aattgatata 235  Q
    | ||||||||    
T  28573 agttgatata 28564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 28853 - 28794
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    |||||||||||  |||||||||| ||| ||||||||||||||| |||||  |||||||||    
T  28853 ttgttgttgagatatatgtttatacatacatgactgatggtgacggatttgatatccaat 28794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 26 - 222
Target Start/End: Original strand, 98488 - 98683
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcat 125  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  98488 catatgcatttgttgttgagtcatatgttcacgcattcatgactgatggtgatggattttatatccaattgaggtgattatgatgttctgttggcatcat 98587  T
Q  126 ggggtgacaacttagaagttggtgacgacggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtcataatcgtgaa 222  Q
     |||||||  | |||| |||||||| | ||||||| ||||||||||||||||||||||| | ||||||||||||||||||||| || |||| |||||    
T  98588 -gggtgacggcctagacgttggtgatgtcggtaccacatgcatttaggtgtcgtgtctaagaacataccatgttgtggcatgactcctaattgtgaa 98683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 26 - 234
Target Start/End: Original strand, 3212 - 3419
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcat 125  Q
    |||||||||| ||||| |||||||||||| |||||||||||  ||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||    
T  3212 catatgcatt-gttgtagagtcatatgttcatgcattcatgtttgatggtgacgaattttatatccaattgaggtgattatggtgttctgttggcatcat 3310  T
Q  126 ggggtgacaacttagaagttggtgacgacggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtcataatcgtgaaaat 225  Q
    |||| |||  | |||| |||||||| |||||||||||||| ||||| ||||||||||||||| |||| ||| |||| ||||||||| |||| ||||||||    
T  3311 ggggcgacggcctagacgttggtgatgacggtaccgcatgaatttatgtgtcgtgtctaggggcatatcatattgtagcatgagtcctaattgtgaaaat 3410  T
Q  226 aattgatat 234  Q
    |||||||||    
T  3411 aattgatat 3419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700 (Bit Score: 114; Significance: 6e-58; HSPs: 2)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 26 - 211
Target Start/End: Complemental strand, 1255 - 1071
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcat 125  Q
    |||||||||| ||||| || ||||||||| |||||||||||||||||||||| ||||| ||||||||||| ||||||||||| |||||||||||||||||    
T  1255 catatgcatt-gttgtcgactcatatgttcatgcattcatgactgatggtgacggattttatatccaatttaggtgattatgatgttctgttggcatcat 1157  T
Q  126 ggggtgacaacttagaagttggtgacgacggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtc 211  Q
    |||||||| || |||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||| | || |||||||||    
T  1156 ggggtgacgacctagacgttggtgacgacggtaccgcatgcatttatgtgtcgtgtttagggacatatcatatcgttgcatgagtc 1071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 1333 - 1277
Alignment:
Q  38 ttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    ||||||||  ||||||||||  || |||||||||||||||| |||| ||||||||||    
T  1333 ttgttgagatatatgtttatagatacatgactgatggtgatagattttatatccaat 1277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 114; Significance: 6e-58; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 38 - 211
Target Start/End: Complemental strand, 104604 - 104432
Alignment:
Q  38 ttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcatggggtgacaact 137  Q
    |||| |||||||||||| ||||||||||||||||||||||   ||| ||||||||||||| ||||||||||||||||||||||||||| ||||||| ||     
T  104604 ttgtcgagtcatatgttcatgcattcatgactgatggtgacatattttatatccaattgaagtgattatggtgttctgttggcatcat-gggtgacgacc 104506  T
Q  138 tagaagttggtgacgacggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtc 211  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||    
T  104505 tagacgttggtgacgacggtaccgcatgcatttatgtgtcgtgtctagggacatatcatattgtggcatgagtc 104432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 104696 - 104639
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatcca 92  Q
    |||||||||||  |||||||||| ||| ||||||||||||||| ||||| ||||||||    
T  104696 ttgttgttgagatatatgtttatacatacatgactgatggtgaaggattttatatcca 104639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 6e-58; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 26 - 211
Target Start/End: Complemental strand, 18164842 - 18164658
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcat 125  Q
    |||||||||| ||||| |||||||||||| ||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||    
T  18164842 catatgcatt-gttgtcgagtcatatgttcatgcattcatgactgatggtgacagattttatatccaattgaggtgattatggtgttctgttggcatcat 18164744  T
Q  126 ggggtgacaacttagaagttggtgacgacggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtc 211  Q
    |||||||| || ||||  |||| ||||||| ||||||||||||||| |||| ||||| ||||||||| ||| ||||||||||||||    
T  18164743 ggggtgacgacctagacattggcgacgacgctaccgcatgcatttatgtgttgtgtcgagggacatatcatattgtggcatgagtc 18164658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 36357957 - 36358014
Alignment:
Q  154 cggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtc 211  Q
    ||||||| |||||||||| ||||| |||||||||||||| ||| |||| |||||||||    
T  36357957 cggtaccacatgcatttatgtgtcatgtctagggacataacattttgttgcatgagtc 36358014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 13378381 - 13378437
Alignment:
Q  154 cggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtc 211  Q
    ||||||| |||||||||||||||| ||| |||||||||| ||| |||| |||||||||    
T  13378381 cggtaccacatgcatttaggtgtcatgtttagggacatatcat-ttgttgcatgagtc 13378437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1068 (Bit Score: 82; Significance: 8e-39; HSPs: 2)
Name: scaffold1068
Description:

Target: scaffold1068; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 26 - 211
Target Start/End: Complemental strand, 1915 - 1731
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcat 125  Q
    |||||||||| |||||  ||||||||||| ||||||||||||||||||||||   ||| |||||||||||| |||||||||| | || ||||||||||||    
T  1915 catatgcatt-gttgtcaagtcatatgttcatgcattcatgactgatggtgacatattttatatccaattgcggtgattatgatattttgttggcatcat 1817  T
Q  126 ggggtgacaacttagaagttggtgacgacggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtc 211  Q
    ||||||||  | |||| ||||||||||| |||||| |||||||||| || || ||| |||||||||| ||| |||| |||||||||    
T  1816 ggggtgacggcctagacgttggtgacgatggtaccacatgcatttatgtctcatgtttagggacatatcatattgttgcatgagtc 1731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1068; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 1995 - 1937
Alignment:
Q  36 tgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    ||||||||||  |||||||||| ||| ||||||||||||||| ||||| ||||||||||    
T  1995 tgttgttgagatatatgtttatacatacatgactgatggtgacggattttatatccaat 1937  T

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Target: scaffold0090 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 26 - 168
Target Start/End: Original strand, 36292 - 36432
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcat 125  Q
    |||||||||||||| |||| ||||||||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||| | ||| |||||||||||    
T  36292 catatgcatttgttattgaatcatatgttcatgcattcatgactgatggtgacagattttatatccaattgaggtgattatgatattcagttggcatcat 36391  T
Q  126 ggggtgacaacttagaagttggtgacgacggtaccgcatgcat 168  Q
    ||||||||  | |||| ||||||||  | ||||||||||||||    
T  36392 ggggtgacggcctagacgttggtga--atggtaccgcatgcat 36432  T

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Target: scaffold0090; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 36208 - 36261
Alignment:
Q  36 tgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatat 89  Q
    |||||||||| ||| ||||||| ||||||||||||||||||||||||| |||||    
T  36208 tgttgttgagacatttgtttatacattcatgactgatggtgatggattttatat 36261  T

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Target: scaffold0409 (Bit Score: 64; Significance: 4e-28; HSPs: 4)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 2641 - 2739
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcat 125  Q
    |||||||||| ||||| |||||||||||| ||||||||||||||||||||||   ||| ||||||||||||||||||||||| |||||||||||||||||    
T  2641 catatgcatt-gttgtcgagtcatatgttcatgcattcatgactgatggtgacaaattttatatccaattgaggtgattatgatgttctgttggcatcat 2739  T

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Target: scaffold0409; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 10896 - 10994
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatcat 125  Q
    |||||||||| ||||| |||||||||||| ||||||||||||||||||||||   ||| ||||||||||||||||||||||| |||||||||||||||||    
T  10896 catatgcatt-gttgtcgagtcatatgttcatgcattcatgactgatggtgacaaattttatatccaattgaggtgattatgatgttctgttggcatcat 10994  T

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Target: scaffold0409; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 2573 - 2619
Alignment:
Q  48 atatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    |||||||||||||| ||||||||||||||| ||||| ||||||||||    
T  2573 atatgtttatgcatacatgactgatggtgacggattttatatccaat 2619  T

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Target: scaffold0409; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 10828 - 10874
Alignment:
Q  48 atatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    |||||||||||||| ||||||||||||||| ||||| ||||||||||    
T  10828 atatgtttatgcatacatgactgatggtgacggattttatatccaat 10874  T

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Target: scaffold0503 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 10276 - 10179
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaattgaggtgattatggtgttctgttggcatca 124  Q
    |||||||||| ||||| |||||||||||  |||||||||||||||||||||| ||| | ||||||||||||||||||||||| |||| | |||||||||    
T  10276 catatgcatt-gttgtcgagtcatatgtccatgcattcatgactgatggtgacggactttatatccaattgaggtgattatgatgttttattggcatca 10179  T

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Target: scaffold0258 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 8874 - 8748
Alignment:
Q  85 tatatccaattgaggtgattatggtgttctgttggcatcatggggtgacaacttagaagttggtgacgacggtaccgcatgcatttaggtgtcgtgtcta 184  Q
    ||||| ||||||||||| ||||| |||  ||||||||||||| ||||||  | |||| |||| ||  ||| ||||| ||||||| |||| ||||||||||    
T  8874 tatattcaattgaggtgtttatgatgtgttgttggcatcatgaggtgacggcctagacgttgttggtgacagtaccacatgcatgtaggagtcgtgtcta 8775  T
Q  185 gggacataccatgttgtggcatgagtc 211  Q
    || ||||| ||||||||||||||||||    
T  8774 ggaacataacatgttgtggcatgagtc 8748  T

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Target: scaffold0005 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 247295 - 247361
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaa 93  Q
    |||||||||| |||||||||||||||||| |||||| ||||||||||||||| ||||| |||||||||    
T  247295 catatgcatt-gttgttgagtcatatgttcatgcatacatgactgatggtgacggattttatatccaa 247361  T

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Target: scaffold0396 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 168
Target Start/End: Original strand, 101 - 177
Alignment:
Q  92 aattgaggtgattatggtgttctgttggcatcatggggtgacaacttagaagttggtgacgacggtaccgcatgcat 168  Q
    |||||||||||||||| ||||| ||||||||||||||| ||   | ||||  |||||||||||||||||||||||||    
T  101 aattgaggtgattatgatgttcagttggcatcatggggcgatcgcctagacattggtgacgacggtaccgcatgcat 177  T

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Target: scaffold0158 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 23624 - 23565
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    |||||||||||  |||||||||||||| ||||||||||||||| ||||| ||||||||||    
T  23624 ttgttgttgagatatatgtttatgcatacatgactgatggtgacggattttatatccaat 23565  T

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Target: scaffold0158; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 23543 - 23496
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatgg 74  Q
    |||||||||| |||||||||||||||||| |||||| ||||||||||||    
T  23543 catatgcatt-gttgttgagtcatatgttcatgcatacatgactgatgg 23496  T

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Target: scaffold0335 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 9459 - 9518
Alignment:
Q  35 ttgttgttgagtcatatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    |||||||||||  ||||||||||||||  |||||||||||||| ||||| ||||||||||    
T  9459 ttgttgttgagatatatgtttatgcatagatgactgatggtgacggattttatatccaat 9518  T

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Target: scaffold0686 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 7429 - 7482
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatgg 80  Q
    |||||||||| |||||||||||||||||| |||||| |||||||||||| |||||    
T  7429 catatgcatt-gttgttgagtcatatgttcatgcatacatgactgatggagatgg 7482  T

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Target: scaffold0138 (Bit Score: 33; Significance: 0.000000001; HSPs: 4)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 27996 - 27949
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatgg 74  Q
    |||||||||| |||||||||||||||||| |||||| ||||||||||||    
T  27996 catatgcatt-gttgttgagtcatatgttcatgcatacatgactgatgg 27949  T

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Target: scaffold0138; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 39992 - 39945
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatgg 74  Q
    |||||||||| |||||||||||||||||| |||||| ||||||||||||    
T  39992 catatgcatt-gttgttgagtcatatgttcatgcatacatgactgatgg 39945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 28064 - 28018
Alignment:
Q  48 atatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    |||||||||||||| |||||||||||||||  |||| ||||||||||    
T  28064 atatgtttatgcatacatgactgatggtgacagattttatatccaat 28018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 40060 - 40014
Alignment:
Q  48 atatgtttatgcattcatgactgatggtgatggattctatatccaat 94  Q
    |||||||||||||| |||||||||||||||  |||| ||||||||||    
T  40060 atatgtttatgcatacatgactgatggtgacagattttatatccaat 40014  T

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Target: scaffold0016 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 167632 - 167687
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatggtgatggat 82  Q
    |||||||||| |||||||||||||||||| |||||| |||||||||||  |||||||    
T  167632 catatgcatt-gttgttgagtcatatgttcatgcatacatgactgatgaagatggat 167687  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 165856 - 165903
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatgg 74  Q
    |||||||||| |||||||||||||||||| |||||| ||||||||||||    
T  165856 catatgcatt-gttgttgagtcatatgttcatgcatacatgactgatgg 165903  T

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Target: scaffold0001; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 165999 - 166055
Alignment:
Q  154 cggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtc 211  Q
    ||||||||||||||| |||| || |||||||||  |||| ||||||||||||||||||    
T  165999 cggtaccgcatgcatatagg-gttgtgtctaggatcatatcatgttgtggcatgagtc 166055  T

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Target: scaffold0132 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 12574 - 12528
Alignment:
Q  26 catatgcatttgttgttgagtcatatgtttatgcattcatgactgatg 73  Q
    |||||||||| |||||||||||||||||| |||||| |||||||||||    
T  12574 catatgcatt-gttgttgagtcatatgttcatgcatacatgactgatg 12528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1486 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1486
Description:

Target: scaffold1486; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 184
Target Start/End: Complemental strand, 1570 - 1540
Alignment:
Q  154 cggtaccgcatgcatttaggtgtcgtgtcta 184  Q
    |||||||||||||||||||||||||||||||    
T  1570 cggtaccgcatgcatttaggtgtcgtgtcta 1540  T

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Target: scaffold0892 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 2554 - 2513
Alignment:
Q  41 ttgagtcatatgtttatgcattcatgactgatggtgatggat 82  Q
    |||||||||||||| |||||| |||||||||||| |||||||    
T  2554 ttgagtcatatgttcatgcatacatgactgatggagatggat 2513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 52895 - 52838
Alignment:
Q  154 cggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtc 211  Q
    ||||||||||||||| |||||||||||||||||  |||| ||||  ||| ||||||||    
T  52895 cggtaccgcatgcatataggtgtcgtgtctaggatcatatcatgaggtgacatgagtc 52838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 186
Target Start/End: Complemental strand, 44699 - 44667
Alignment:
Q  154 cggtaccgcatgcatttaggtgtcgtgtctagg 186  Q
    ||||||||||||||| |||||||||||||||||    
T  44699 cggtaccgcatgcatataggtgtcgtgtctagg 44667  T

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Target: scaffold0023 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 58058 - 58115
Alignment:
Q  154 cggtaccgcatgcatttaggtgtcgtgtctagggacataccatgttgtggcatgagtc 211  Q
    ||||||||||||||| |||||||||||||||||  |||| ||||  ||| ||||||||    
T  58058 cggtaccgcatgcatgtaggtgtcgtgtctaggatcatatcatgaggtgacatgagtc 58115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 42521 - 42480
Alignment:
Q  41 ttgagtcatatgtttatgcattcatgactgatggtgatggat 82  Q
    |||||||||||||| |||||| |||||||||||| |||||||    
T  42521 ttgagtcatatgttcatgcatacatgactgatggagatggat 42480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 10939 - 11003
Alignment:
Q  104 tatggtgttctgttggcatcatggggtgacaacttagaagttggtgacgacggtaccgcatgcat 168  Q
    |||| ||||| ||||||||||||||||||| || ||||  ||| ||  |||||||||||||||||    
T  10939 tatgatgttcagttggcatcatggggtgacgacctagacattgttggtgacggtaccgcatgcat 11003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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