View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4313_low_9 (Length: 239)

Name: NF4313_low_9
Description: NF4313
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4313_low_9
NF4313_low_9
[»] chr8 (22 HSPs)
chr8 (93-239)||(34188687-34188833)
chr8 (24-79)||(18203245-18203300)
chr8 (24-79)||(39169016-39169071)
chr8 (25-79)||(24422537-24422591)
chr8 (24-83)||(34908675-34908735)
chr8 (24-79)||(6878512-6878567)
chr8 (24-79)||(12000480-12000535)
chr8 (25-80)||(14433376-14433431)
chr8 (24-79)||(19715227-19715282)
chr8 (24-79)||(28074488-28074543)
chr8 (24-79)||(29938290-29938345)
chr8 (24-79)||(35544219-35544274)
chr8 (24-79)||(38896685-38896740)
chr8 (25-79)||(5830942-5830996)
chr8 (25-79)||(22578205-22578259)
chr8 (25-79)||(31873647-31873701)
chr8 (25-79)||(35631027-35631081)
chr8 (24-78)||(40483728-40483782)
chr8 (24-65)||(4135701-4135742)
chr8 (24-81)||(42946646-42946703)
chr8 (24-79)||(22453541-22453597)
chr8 (24-64)||(30851989-30852029)
[»] chr4 (30 HSPs)
chr4 (24-79)||(35877069-35877124)
chr4 (24-82)||(25367470-25367528)
chr4 (24-79)||(42629808-42629863)
chr4 (25-82)||(22842902-22842959)
chr4 (24-84)||(45250065-45250125)
chr4 (24-79)||(10555322-10555377)
chr4 (24-79)||(22019090-22019145)
chr4 (24-79)||(25771204-25771259)
chr4 (24-79)||(30088824-30088879)
chr4 (28-79)||(31486854-31486905)
chr4 (24-79)||(31648560-31648615)
chr4 (24-79)||(32860845-32860900)
chr4 (24-79)||(34016767-34016822)
chr4 (24-79)||(42179675-42179730)
chr4 (24-79)||(42507762-42507817)
chr4 (24-79)||(48380573-48380628)
chr4 (24-79)||(51817170-51817225)
chr4 (24-79)||(56038642-56038697)
chr4 (25-79)||(4294156-4294210)
chr4 (25-79)||(13880451-13880505)
chr4 (24-82)||(23511321-23511379)
chr4 (25-79)||(23621638-23621692)
chr4 (25-75)||(33244996-33245046)
chr4 (25-79)||(34447632-34447686)
chr4 (25-79)||(47869268-47869322)
chr4 (25-79)||(49235986-49236040)
chr4 (24-81)||(7258135-7258192)
chr4 (29-66)||(33924943-33924980)
chr4 (24-80)||(11248974-11249030)
chr4 (24-79)||(47477199-47477255)
[»] chr6 (11 HSPs)
chr6 (24-82)||(11615349-11615407)
chr6 (24-81)||(1352469-1352526)
chr6 (25-89)||(9961305-9961369)
chr6 (24-79)||(3787092-3787147)
chr6 (24-79)||(6835712-6835767)
chr6 (24-79)||(11172885-11172940)
chr6 (24-79)||(26409047-26409102)
chr6 (25-79)||(29017027-29017081)
chr6 (24-82)||(32142372-32142430)
chr6 (27-79)||(15497841-15497893)
chr6 (25-81)||(34283341-34283397)
[»] chr5 (16 HSPs)
chr5 (24-79)||(28377638-28377692)
chr5 (25-83)||(4456389-4456447)
chr5 (24-80)||(5378192-5378248)
chr5 (24-79)||(12360787-12360842)
chr5 (24-79)||(29816204-29816259)
chr5 (24-79)||(34163122-34163177)
chr5 (24-79)||(34382048-34382103)
chr5 (24-79)||(35869929-35869984)
chr5 (25-79)||(6334951-6335005)
chr5 (25-79)||(7363325-7363379)
chr5 (24-82)||(18094707-18094765)
chr5 (25-79)||(20495437-20495491)
chr5 (25-79)||(27366461-27366515)
chr5 (25-79)||(29619445-29619499)
chr5 (25-82)||(10370544-10370601)
chr5 (47-79)||(41954493-41954525)
[»] chr3 (25 HSPs)
chr3 (24-79)||(23781905-23781959)
chr3 (25-79)||(51167339-51167393)
chr3 (24-79)||(240700-240755)
chr3 (24-79)||(390755-390810)
chr3 (25-76)||(2510253-2510304)
chr3 (24-79)||(3671607-3671662)
chr3 (24-79)||(21216893-21216948)
chr3 (24-79)||(25904135-25904190)
chr3 (24-79)||(28226971-28227026)
chr3 (24-79)||(31786795-31786850)
chr3 (24-79)||(32100308-32100363)
chr3 (25-80)||(34663429-34663484)
chr3 (24-79)||(44048098-44048153)
chr3 (25-79)||(38783669-38783723)
chr3 (25-79)||(41751101-41751155)
chr3 (24-93)||(42662685-42662752)
chr3 (25-79)||(43599570-43599624)
chr3 (25-79)||(45824113-45824167)
chr3 (25-79)||(48333710-48333764)
chr3 (24-82)||(52040476-52040534)
chr3 (25-83)||(52870665-52870723)
chr3 (24-73)||(9783249-9783298)
chr3 (25-82)||(54747935-54747992)
chr3 (24-80)||(24978828-24978884)
chr3 (25-65)||(52804912-52804952)
[»] chr7 (22 HSPs)
chr7 (25-79)||(37798049-37798102)
chr7 (24-81)||(4513586-4513643)
chr7 (24-79)||(1643732-1643787)
chr7 (24-79)||(5680428-5680483)
chr7 (24-79)||(5705480-5705535)
chr7 (25-80)||(13439316-13439371)
chr7 (24-79)||(24685654-24685709)
chr7 (24-79)||(38074501-38074556)
chr7 (24-79)||(44480986-44481041)
chr7 (24-79)||(45780876-45780931)
chr7 (24-79)||(46373229-46373284)
chr7 (24-79)||(47578906-47578960)
chr7 (25-79)||(22918173-22918227)
chr7 (25-79)||(23059070-23059124)
chr7 (25-79)||(27116640-27116694)
chr7 (25-79)||(28703543-28703597)
chr7 (25-79)||(32467807-32467861)
chr7 (25-79)||(40537008-40537062)
chr7 (25-79)||(42121901-42121955)
chr7 (25-82)||(44894801-44894858)
chr7 (25-81)||(28586933-28586989)
chr7 (24-83)||(34275681-34275741)
[»] chr2 (19 HSPs)
chr2 (24-86)||(19002898-19002960)
chr2 (25-79)||(30780056-30780110)
chr2 (25-82)||(35669683-35669740)
chr2 (24-80)||(1221265-1221321)
chr2 (24-80)||(14943490-14943546)
chr2 (24-80)||(26850049-26850105)
chr2 (24-80)||(36068103-36068159)
chr2 (24-79)||(14527749-14527804)
chr2 (24-79)||(18450156-18450211)
chr2 (24-79)||(39927717-39927772)
chr2 (24-79)||(40171764-40171819)
chr2 (24-79)||(40833468-40833523)
chr2 (24-86)||(4646619-4646681)
chr2 (25-79)||(14309132-14309186)
chr2 (25-79)||(22060979-22061033)
chr2 (25-82)||(28206635-28206692)
chr2 (24-84)||(6579695-6579755)
chr2 (24-64)||(6596481-6596521)
chr2 (25-85)||(28786951-28787011)
[»] chr1 (18 HSPs)
chr1 (24-82)||(39282529-39282587)
chr1 (24-88)||(38816839-38816903)
chr1 (24-79)||(3552786-3552841)
chr1 (24-79)||(4750426-4750481)
chr1 (24-79)||(8712104-8712159)
chr1 (24-79)||(16705294-16705349)
chr1 (24-79)||(24583829-24583884)
chr1 (24-79)||(24589498-24589553)
chr1 (24-79)||(31045569-31045624)
chr1 (25-79)||(4226239-4226293)
chr1 (25-79)||(6920957-6921011)
chr1 (25-79)||(18127334-18127388)
chr1 (25-79)||(31925294-31925348)
chr1 (25-79)||(33488129-33488183)
chr1 (25-79)||(38238866-38238920)
chr1 (26-83)||(8012643-8012700)
chr1 (25-82)||(44789265-44789322)
chr1 (27-79)||(49251794-49251846)
[»] scaffold0160 (1 HSPs)
scaffold0160 (24-79)||(25987-26042)
[»] scaffold0172 (1 HSPs)
scaffold0172 (25-79)||(18420-18474)
[»] scaffold0037 (1 HSPs)
scaffold0037 (25-79)||(98862-98916)
[»] scaffold0001 (1 HSPs)
scaffold0001 (24-74)||(524296-524346)
[»] scaffold0427 (1 HSPs)
scaffold0427 (24-64)||(5246-5286)


Alignment Details
Target: chr8 (Bit Score: 139; Significance: 7e-73; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 93 - 239
Target Start/End: Complemental strand, 34188833 - 34188687
Alignment:
Q  93 taagatatttagtaacacactaacaccactttgacattcttttcctccgctccctttaattctttattaactttggataggaaacaacatgcattacatc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34188833 taagatatttagtaacacactaacaccactttgacattcttttcctctgctctctttaattctttattaactttggataggaaacaacatgcattacatc 34188734  T
Q  193 ctaaccggaatttatattaccccaagagtatattgtagagaaatcaa 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  34188733 ctaaccggaatttatattaccccaagagtatattgtagagaaatcaa 34188687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 18203245 - 18203300
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||| |||||||||||||||||||||||||| |||||||  |||||||||||    
T  18203245 caatttggaacaaattatttttgtaaagtgacatacaatttgggacggagggagta 18203300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 39169016 - 39169071
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||| |||||||||||    
T  39169016 caatttgggacaaatattttttctaaagtgacatacaatttggaacggagggagta 39169071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 24422537 - 24422591
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||  ||||| ||||||||||||||||||||  |||||||||||    
T  24422537 aatttgggacaaatattttttctaaagtgacatataatttgggacggagggagta 24422591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 34908735 - 34908675
Alignment:
Q  24 caatttgggacaaat-tatttttgtaaagtgacatataatttggatcggagggagtagtat 83  Q
    ||||||||||||||| | ||||| |||||||||||| |||||||  |||||||||||||||    
T  34908735 caatttgggacaaatatttttttttaaagtgacatacaatttgggacggagggagtagtat 34908675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 6878567 - 6878512
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  6878567 caatttgggacaaatgttttttctaaagtgacatacaatttgggacggagggagta 6878512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 12000535 - 12000480
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  12000535 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 12000480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 14433376 - 14433431
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtag 80  Q
    ||||||||||||||  ||||| |||||||||||| |||||||  ||||||||||||    
T  14433376 aatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagtag 14433431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 19715282 - 19715227
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  19715282 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 19715227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 28074488 - 28074543
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  28074488 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 28074543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 29938345 - 29938290
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  29938345 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 29938290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 35544219 - 35544274
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  35544219 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 35544274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 38896685 - 38896740
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  38896685 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 38896740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 5830996 - 5830942
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  5830996 aatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 5830942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 22578259 - 22578205
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  22578259 aatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 22578205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 31873647 - 31873701
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  31873647 aatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 31873701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 35631081 - 35631027
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  35631081 aatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 35631027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 40483782 - 40483728
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagt 78  Q
    ||||||| |||||||  ||||| |||||||||||| |||||||| ||||||||||    
T  40483782 caatttgagacaaatattttttctaaagtgacatacaatttggaacggagggagt 40483728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 4135742 - 4135701
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttg 65  Q
    |||||| ||||||||||||||| |||||||||||| ||||||    
T  4135742 caatttaggacaaattatttttctaaagtgacatacaatttg 4135701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 42946646 - 42946703
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtagt 81  Q
    |||||| ||||||||  ||||| |||||||||||| |||||||  |||||||||||||    
T  42946646 caatttaggacaaatattttttctaaagtgacatacaatttgggacggagggagtagt 42946703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 22453541 - 22453597
Alignment:
Q  24 caatttgggacaaat-tatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||| |||| | ||||| |||||||||||| |||||||| |||||||||||    
T  22453541 caatttgggataaatatttttttttaaagtgacatacaatttggaacggagggagta 22453597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 30852029 - 30851989
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataattt 64  Q
    ||||||||||||||| |||||| |||||||||||| |||||    
T  30852029 caatttgggacaaataatttttttaaagtgacatacaattt 30851989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 35877069 - 35877124
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||||||||| |||||||||||| |||||||  |||||||||||    
T  35877069 caatttgggacaaattatttttctaaagtgacatacaatttgggacggagggagta 35877124  T

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Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 25367470 - 25367528
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtagta 82  Q
    |||||||||||||||  ||||| |||||||||||| |||||||| ||||||||||||||    
T  25367470 caatttgggacaaatattttttctaaagtgacatacaatttggaacggagggagtagta 25367528  T

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Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 42629808 - 42629863
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| ||||||||||||||||||||  |||||||||||    
T  42629808 caatttgggacaaatattttttctaaagtgacatataatttgggacggagggagta 42629863  T

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Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 22842959 - 22842902
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtagta 82  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||  ||||||||||||||    
T  22842959 aatttgggacaaattttttttctaaagcgacatacaatttgggacggagggagtagta 22842902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 45250125 - 45250065
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtagtata 84  Q
    |||||||||||||||  ||||| |||| ||||||| |||||||  ||||||||||||||||    
T  45250125 caatttgggacaaatattttttctaaaatgacatacaatttgggacggagggagtagtata 45250065  T

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Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 10555322 - 10555377
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  10555322 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 10555377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 22019145 - 22019090
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  22019145 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 22019090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 25771204 - 25771259
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  25771204 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 25771259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 30088824 - 30088879
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  30088824 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 30088879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 31486905 - 31486854
Alignment:
Q  28 ttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||  ||||| |||||||||||| |||||||| |||||||||||    
T  31486905 ttgggacaaatactttttctaaagtgacatacaatttggaacggagggagta 31486854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 31648560 - 31648615
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  31648560 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 31648615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 32860845 - 32860900
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  32860845 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 32860900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 34016822 - 34016767
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  34016822 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 34016767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 42179675 - 42179730
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  42179675 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 42179730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 42507762 - 42507817
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  42507762 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 42507817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 48380628 - 48380573
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  48380628 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 48380573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 51817170 - 51817225
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  51817170 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 51817225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 56038642 - 56038697
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  56038642 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 56038697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 4294156 - 4294210
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  4294156 aatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 4294210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 13880505 - 13880451
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  13880505 aatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 13880451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 23511321 - 23511379
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtagta 82  Q
    |||||||||||||||  ||||| |||| |||||||||||||||  ||||| ||||||||    
T  23511321 caatttgggacaaatattttttctaaaatgacatataatttgggacggagagagtagta 23511379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 23621692 - 23621638
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  23621692 aatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 23621638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 33244996 - 33245046
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggaggg 75  Q
    ||||||||||||||  ||||| |||||||||||| |||||||| |||||||    
T  33244996 aatttgggacaaatattttttctaaagtgacatacaatttggaacggaggg 33245046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 34447686 - 34447632
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  34447686 aatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 34447632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 47869268 - 47869322
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||  ||||| |||| ||||||| |||||||| |||||||||||    
T  47869268 aatttgggacaaatattttttctaaattgacatacaatttggaacggagggagta 47869322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 49235986 - 49236040
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  49235986 aatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 49236040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 7258135 - 7258192
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtagt 81  Q
    |||||| ||||||||  ||||| |||||||||||| |||||||  |||||||||||||    
T  7258135 caatttaggacaaatattttttctaaagtgacatacaatttgggacggagggagtagt 7258192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 33924943 - 33924980
Alignment:
Q  29 tgggacaaattatttttgtaaagtgacatataatttgg 66  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  33924943 tgggacaaattatttttctaaagtgacatacaatttgg 33924980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 11248974 - 11249030
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtag 80  Q
    |||||||||||||||  ||||| |||||||||||| ||| |||  ||||||||||||    
T  11248974 caatttgggacaaatattttttctaaagtgacatacaatatggtacggagggagtag 11249030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 47477199 - 47477255
Alignment:
Q  24 caatttgggacaaattatttt-tgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||| |||| | ||||| |||||||||||| || |||||||||||    
T  47477199 caatttgggacaaatttttttctctaaagcgacatataatttagaacggagggagta 47477255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 11615407 - 11615349
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtagta 82  Q
    |||||||||||||||  ||||| ||||||||||||||||||||  ||||||||||||||    
T  11615407 caatttgggacaaatattttttctaaagtgacatataatttgggacggagggagtagta 11615349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 1352526 - 1352469
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtagt 81  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||||    
T  1352526 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagtagt 1352469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 9961369 - 9961305
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtagtatatatta 89  Q
    ||||||||||||||  ||||| |||||||||||| |||||||  ||||||||||| || ||||||    
T  9961369 aatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagtaatagatatta 9961305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 3787147 - 3787092
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  3787147 caatttgggacaaatattttttttaaagtgacatacaatttgggacggagggagta 3787092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 6835767 - 6835712
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  6835767 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 6835712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 11172940 - 11172885
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  11172940 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 11172885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 26409102 - 26409047
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  26409102 caatttgggacaaatattttttctaaagtgacatacaatttggggcggagggagta 26409047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 29017081 - 29017027
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||| |||||  |||| ||||||||||||||  |||||||||||    
T  29017081 aatttgggacaaattttttttacaaagcgacatataatttgggacggagggagta 29017027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 32142430 - 32142372
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtagta 82  Q
    |||||||||||||||  ||||| |||| ||||||| |||||||  ||||||||||||||    
T  32142430 caatttgggacaaatattttttctaaaatgacatacaatttgggacggagggagtagta 32142372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 15497893 - 15497841
Alignment:
Q  27 tttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  15497893 tttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 15497841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 34283397 - 34283341
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtagt 81  Q
    ||||||||||||||| |||||  |||| |||||| |||||||  |||||||||||||    
T  34283397 aatttgggacaaattttttttccaaagcgacatacaatttgggacggagggagtagt 34283341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000002; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 28377692 - 28377638
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||| |||||| |||||| |||||||||||||| |||||||||||    
T  28377692 caatttgggacaaat-atttttctaaagtaacatataatttggaacggagggagta 28377638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 4456447 - 4456389
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtagtat 83  Q
    ||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||||||    
T  4456447 aatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagtagtat 4456389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 5378192 - 5378248
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtag 80  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  ||||||||||||    
T  5378192 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagtag 5378248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 12360842 - 12360787
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  12360842 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 12360787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 29816259 - 29816204
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  29816259 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 29816204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 34163177 - 34163122
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  34163177 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 34163122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 34382048 - 34382103
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  34382048 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 34382103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 35869984 - 35869929
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  35869984 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 35869929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 6335005 - 6334951
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||| || ||||||||||||| |||| |||||||| | |||||||||    
T  6335005 aatttgggacaatttttttttgtaaagtggcatacaatttggaacagagggagta 6334951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 7363325 - 7363379
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  7363325 aatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 7363379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 18094707 - 18094765
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtagta 82  Q
    |||||||||| ||||  ||||| ||||||||||||||||||||  |||||| |||||||    
T  18094707 caatttgggataaatattttttctaaagtgacatataatttgggacggaggaagtagta 18094765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 20495491 - 20495437
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||  ||||| |||| | |||||||||||||| |||||||||||    
T  20495491 aatttgggacaaatattttttctaaaataacatataatttggaacggagggagta 20495437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 27366461 - 27366515
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||| || ||||| ||||| |||||| |||||||| |||||||||||    
T  27366461 aatttgggacaatttttttttctaaagcgacatacaatttggaacggagggagta 27366515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 29619445 - 29619499
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  29619445 aatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 29619499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 10370601 - 10370544
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtagta 82  Q
    ||||||||||||||  ||||| |||| ||||||| |||||||  ||||||||||||||    
T  10370601 aatttgggacaaatattttttctaaaatgacatacaatttgggacggagggagtagta 10370544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 79
Target Start/End: Complemental strand, 41954525 - 41954493
Alignment:
Q  47 taaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||||||||| |||||||||||    
T  41954525 taaagtgacatataatttggaacggagggagta 41954493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 23781959 - 23781905
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||| |||||||||| |||||| ||||||||||||||||||||| |||||||||||    
T  23781959 caatctgggacaaat-atttttctaaagtgacatataatttggaacggagggagta 23781905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 51167339 - 51167393
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||  ||||| ||||||||||||||||||||  |||||||||||    
T  51167339 aatttgggacaaatattttttctaaagtgacatataatttgggacggagggagta 51167393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 240700 - 240755
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||| |||||| ||||    
T  240700 caatttgggacaaatattttttctaaagtgacatacaatttggaacggaggaagta 240755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 390755 - 390810
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||| ||||||| |||||  ||||||||||| |||||||| |||||||||||    
T  390755 caatttggaacaaattttttttccaaagtgacatacaatttggaacggagggagta 390810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 2510253 - 2510304
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggaggga 76  Q
    ||||||||||||||  ||||| ||||||||||||||||||||  ||||||||    
T  2510253 aatttgggacaaatattttttctaaagtgacatataatttgggacggaggga 2510304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 3671607 - 3671662
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  3671607 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 3671662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 21216893 - 21216948
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  21216893 caatttgggacaaatattttttttaaagtgacatacaatttgggacggagggagta 21216948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 25904135 - 25904190
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  25904135 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 25904190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 28227026 - 28226971
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  28227026 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 28226971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 31786850 - 31786795
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| ||||||||||||||||||||  |||| ||||||    
T  31786850 caatttgggacaaatattttttctaaagtgacatataatttgggacggatggagta 31786795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 32100308 - 32100363
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||| |||||||  ||||| ||||||||||||||||||||  |||||||||||    
T  32100308 caatttgagacaaatattttttctaaagtgacatataatttgggacggagggagta 32100363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 34663484 - 34663429
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtag 80  Q
    ||||||||||||||  ||||| |||||||||||| |||||||  ||||||||||||    
T  34663484 aatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagtag 34663429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 44048153 - 44048098
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  44048153 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 44048098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 38783669 - 38783723
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  38783669 aatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 38783723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 41751155 - 41751101
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  41751155 aatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 41751101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 42662685 - 42662752
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtagtatatattaagat 93  Q
    |||||||| ||||||| |||||  ||||||||||| |||||||  |||||||||||  ||||||||||||    
T  42662685 caatttggaacaaattttttttccaaagtgacatacaatttggggcggagggagta--atatattaagat 42662752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 43599624 - 43599570
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  43599624 aatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 43599570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 45824113 - 45824167
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  45824113 aatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 45824167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 48333764 - 48333710
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  48333764 aatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 48333710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 52040476 - 52040534
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtagta 82  Q
    |||||||||||||||  ||||| |||||||||||| | |||||  ||||||||||||||    
T  52040476 caatttgggacaaatattttttctaaagtgacatacattttgggacggagggagtagta 52040534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 83
Target Start/End: Original strand, 52870665 - 52870723
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtagtat 83  Q
    ||||||||||||||| |||||  |||| |||||| |||||||  |||||||||||||||    
T  52870665 aatttgggacaaattttttttccaaagcgacatacaatttgggacggagggagtagtat 52870723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 9783249 - 9783298
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggag 73  Q
    |||||||||||||||  ||||| |||||||||||| |||||||| |||||    
T  9783249 caatttgggacaaatattttttctaaagtgacatacaatttggaacggag 9783298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 54747935 - 54747992
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtagta 82  Q
    ||||||||||||||  ||||| |||||||||||| |||||||  |||| |||||||||    
T  54747935 aatttgggacaaatattttttctaaagtgacatacaatttgggacggaaggagtagta 54747992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 24978884 - 24978828
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtag 80  Q
    ||||||| |||||||  ||||| |||||||||||| |||||||  ||||||||||||    
T  24978884 caatttgagacaaatattttttctaaagtgacatacaatttgggacggagggagtag 24978828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 52804912 - 52804952
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttg 65  Q
    ||||||||||||||  ||||| |||||||||||||||||||    
T  52804912 aatttgggacaaatattttttctaaagtgacatataatttg 52804952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.00000000008; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 37798102 - 37798049
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||| ||||| |||||||||||| |||||||| |||||||||||    
T  37798102 aatttgggacaaattttttttctaaagtgacatacaatttgga-cggagggagta 37798049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 4513586 - 4513643
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtagt 81  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||||    
T  4513586 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagtagt 4513643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 1643732 - 1643787
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  1643732 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 1643787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 5680428 - 5680483
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||| ||||||  ||||| ||||||||||||||||||||  |||||||||||    
T  5680428 caatttggaacaaatattttttttaaagtgacatataatttgggacggagggagta 5680483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 5705480 - 5705535
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||| ||||||  ||||| ||||||||||||||||||||  |||||||||||    
T  5705480 caatttggaacaaatattttttttaaagtgacatataatttgggacggagggagta 5705535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 13439371 - 13439316
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtag 80  Q
    ||||||||||||||  ||||| |||||||||||| |||||||  ||||||||||||    
T  13439371 aatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagtag 13439316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 24685654 - 24685709
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  24685654 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 24685709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 38074556 - 38074501
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||| || ||| | |||||||||||| |||||||| |||||||||||    
T  38074556 caatttgggacaatttttttctctaaagtgacatacaatttggaacggagggagta 38074501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 44481041 - 44480986
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  44481041 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 44480986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 45780876 - 45780931
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  45780876 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 45780931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 46373229 - 46373284
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  46373229 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 46373284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 47578906 - 47578960
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||| |||||| |||||||||||| |||||||  |||||||||||    
T  47578906 caatttgggacaaat-atttttctaaagtgacatacaatttgggacggagggagta 47578960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 22918227 - 22918173
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  22918227 aatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 22918173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 23059124 - 23059070
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  23059124 aatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 23059070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 27116640 - 27116694
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||| ||||| ||||| |||||||||||| |  |||||||||||    
T  27116640 aatttgggacaaattttttttctaaagcgacatataatttaggacggagggagta 27116694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 28703597 - 28703543
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||  |||||||||||    
T  28703597 aatttgggacaaattttttttctaaagcgacatacaatttgggacggagggagta 28703543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 32467861 - 32467807
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||  |||||||||||    
T  32467861 aatttgggacaaattttttttctaaagcgacatacaatttgggacggagggagta 32467807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 40537008 - 40537062
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||| |||||  |||| ||||||||||||||  |||||||||||    
T  40537008 aatttgggacaaattttttttccaaagcgacatataatttgggacggagggagta 40537062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 42121955 - 42121901
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||| |||||||||||||||||||| |||||| |||||||   ||||||||||    
T  42121955 aatttgagacaaattatttttgtaaagggacatacaatttgggatggagggagta 42121901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 44894801 - 44894858
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtagta 82  Q
    |||||| |||||||  ||||| |||||||||||| |||||||  ||||||||||||||    
T  44894801 aatttgtgacaaatattttttctaaagtgacatacaatttgggacggagggagtagta 44894858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 28586989 - 28586933
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtagt 81  Q
    ||||||||||||||  ||||  ||||| ||||||||||||||  |||||||||||||    
T  28586989 aatttgggacaaatatttttcctaaagcgacatataatttgggacggagggagtagt 28586933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 34275681 - 34275741
Alignment:
Q  24 caatttgggacaaat-tatttttgtaaagtgacatataatttggatcggagggagtagtat 83  Q
    ||||||| ||||||| | ||||| ||||||||||||||||||||   ||||||||||||||    
T  34275681 caatttgagacaaatatttttttctaaagtgacatataatttgggatggagggagtagtat 34275741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.00000000008; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 19002960 - 19002898
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtagtatata 86  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  ||||||||||| ||||||    
T  19002960 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagtattatata 19002898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 30780110 - 30780056
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||  |||||||||||||||||| |||||||  |||||||||||    
T  30780110 aatttgggacaaatattttttgtaaagtgacatacaatttgggacggagggagta 30780056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 35669740 - 35669683
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtagta 82  Q
    ||||||||||||||| ||||| |||||||||||| |||||||  |||||||| |||||    
T  35669740 aatttgggacaaattttttttctaaagtgacatacaatttgggacggagggaatagta 35669683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 1221265 - 1221321
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtag 80  Q
    |||||| ||||||||  ||||| ||||||||||||||||||||  ||||||||||||    
T  1221265 caatttaggacaaatattttttctaaagtgacatataatttgggacggagggagtag 1221321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 14943490 - 14943546
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtag 80  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  ||||||||||||    
T  14943490 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagtag 14943546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 26850049 - 26850105
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtag 80  Q
    |||||||||||||||| ||||| |||||||||||| |||||||   |||||||||||    
T  26850049 caatttgggacaaattttttttctaaagtgacatacaatttgggaaggagggagtag 26850105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 36068159 - 36068103
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtag 80  Q
    |||||||||||||||  ||||| ||||||||||||||||||||  ||||| ||||||    
T  36068159 caatttgggacaaatattttttctaaagtgacatataatttggggcggagagagtag 36068103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 14527804 - 14527749
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  14527804 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 14527749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 18450156 - 18450211
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||| |||||  ||||||||||| |||||||  |||||||||||    
T  18450156 caatttgggacaaatttttttttcaaagtgacatacaatttgggacggagggagta 18450211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 39927717 - 39927772
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  39927717 caatttgggacaaatcttttttctaaagtgacatacaatttgggacggagggagta 39927772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 40171764 - 40171819
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  40171764 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 40171819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 40833523 - 40833468
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  40833523 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 40833468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 4646619 - 4646681
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtagtatata 86  Q
    |||||||||||||||  ||||| |||||| ||||| |||||||  ||||||||||| ||||||    
T  4646619 caatttgggacaaatattttttctaaagtcacatacaatttgggacggagggagtattatata 4646681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 14309132 - 14309186
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||  |||||||||||    
T  14309132 aatttgggacaaattttttttctaaagcgacatacaatttgggacggagggagta 14309186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 22061033 - 22060979
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  22061033 aatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 22060979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 28206635 - 28206692
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtagta 82  Q
    ||||||||||||||  ||||| |||||||||||| ||||| |  ||||||||||||||    
T  28206635 aatttgggacaaatattttttctaaagtgacatacaatttaggacggagggagtagta 28206692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 6579755 - 6579695
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtagtata 84  Q
    |||||||||||||||  ||||| |||| ||||||| |||||||| |||| |||||| ||||    
T  6579755 caatttgggacaaatattttttctaaaatgacatacaatttggaacggatggagtaatata 6579695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 6596521 - 6596481
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataattt 64  Q
    ||||||| ||||||||||||||||||||| ||||| |||||    
T  6596521 caatttgagacaaattatttttgtaaagtaacatacaattt 6596481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 28786951 - 28787011
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtagtatat 85  Q
    ||||| ||||||||  ||||| |||||||||||| |||||||  ||||||||||| |||||    
T  28786951 aatttaggacaaatattttttctaaagtgacatacaatttgggacggagggagtaatatat 28787011  T

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Target: chr1 (Bit Score: 35; Significance: 0.00000000008; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 39282587 - 39282529
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtagta 82  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  ||||||||||||||    
T  39282587 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagtagta 39282529  T

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Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 38816903 - 38816839
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtagtatatatt 88  Q
    |||||||||||||||  ||||| |||||||||||| ||||||   |||| |||||||||||||||    
T  38816903 caatttgggacaaatattttttctaaagtgacatacaatttgagacggatggagtagtatatatt 38816839  T

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Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 3552786 - 3552841
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  3552786 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 3552841  T

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Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 4750426 - 4750481
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  4750426 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 4750481  T

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Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 8712104 - 8712159
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  8712104 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 8712159  T

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Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 16705349 - 16705294
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||| |||||||  ||||| |||||||||||| |||||||| |||||||||||    
T  16705349 caatttgagacaaatattttttctaaagtgacatacaatttggaacggagggagta 16705294  T

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Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 24583884 - 24583829
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  24583884 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 24583829  T

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Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 24589553 - 24589498
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  24589553 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 24589498  T

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Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 31045569 - 31045624
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  31045569 caatttgggacaaatattttttctaaagtgacataaaatttgggacggagggagta 31045624  T

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Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 4226293 - 4226239
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  4226293 aatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 4226239  T

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Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 6920957 - 6921011
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  6920957 aatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 6921011  T

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Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 18127388 - 18127334
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  18127388 aatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 18127334  T

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Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 31925294 - 31925348
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||  ||||| |||||||||||| |||||| | |||||||||||    
T  31925294 aatttgggacaaatattttttctaaagtgacatacaatttgaaacggagggagta 31925348  T

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Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 33488129 - 33488183
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||  |||||||||||    
T  33488129 aatttgggacaaattttttttctaaagcgacatacaatttgggacggagggagta 33488183  T

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Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 38238920 - 38238866
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  38238920 aatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 38238866  T

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Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 8012643 - 8012700
Alignment:
Q  26 atttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtagtat 83  Q
    |||||||||||||  ||||| |||||||||||| |||||||  | |||||||||||||    
T  8012643 atttgggacaaatattttttctaaagtgacatacaatttgggacagagggagtagtat 8012700  T

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Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 44789322 - 44789265
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagtagta 82  Q
    ||||||| |||| |||||||| |||| ||||||| |||||||  ||||||||||||||    
T  44789322 aatttggaacaatttatttttttaaaatgacatacaatttgggacggagggagtagta 44789265  T

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Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 49251794 - 49251846
Alignment:
Q  27 tttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  49251794 tttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 49251846  T

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Target: scaffold0160 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 25987 - 26042
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    |||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  25987 caatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 26042  T

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Target: scaffold0172 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 18420 - 18474
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||  |||||  |||||||||||||||||||  |||||||||||    
T  18420 aatttgggacaaatattttttccaaagtgacatataatttgggacggagggagta 18474  T

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Target: scaffold0037 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 98916 - 98862
Alignment:
Q  25 aatttgggacaaattatttttgtaaagtgacatataatttggatcggagggagta 79  Q
    ||||||||||||||  ||||| |||||||||||| |||||||  |||||||||||    
T  98916 aatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 98862  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 524346 - 524296
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataatttggatcggagg 74  Q
    |||||||||||||||  ||||| |||||||||||| |||||||| ||||||    
T  524346 caatttgggacaaatattttttctaaagtgacatacaatttggaacggagg 524296  T

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Target: scaffold0427 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 5286 - 5246
Alignment:
Q  24 caatttgggacaaattatttttgtaaagtgacatataattt 64  Q
    |||||||||||||||  ||||| ||||||||||||||||||    
T  5286 caatttgggacaaatattttttctaaagtgacatataattt 5246  T

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