View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4315_high_11 (Length: 286)
Name: NF4315_high_11
Description: NF4315
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4315_high_11 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 67 - 286
Target Start/End: Original strand, 2129067 - 2129286
Alignment:
| Q |
67 |
aaaagaaactgatgtaattcaaaaagtaaaacgaatttcaaaatcagtattacaaaaagtcatcataatgtatatacctaggactcaatagaaatttaaa |
166 |
Q |
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| T |
2129067 |
aaaagaaactgatgcaattcaaaaggtaaaacgaatttcaaaatcagcattacaaaaagtcatcataatgtatatacctaggactcagtagaaatttaaa |
2129166 |
T |
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| Q |
167 |
agttgattgaatttttgaaataattaaaagactagacttgtgggttgtctcccaagaaacgcgtgtttaacatctcgagcttgacgaaccaacactcttg |
266 |
Q |
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| T |
2129167 |
aattgattgaatttttgaaataattaaaagactagacttgtgggttgtctcccaagaaacgcgtgtttaacatctcgagcttgacgaaccaacactcttg |
2129266 |
T |
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| Q |
267 |
tcagggtggatatttaaaca |
286 |
Q |
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| T |
2129267 |
tcagggtggatatttaaaca |
2129286 |
T |
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