View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4317-Insertion-4 (Length: 235)
Name: NF4317-Insertion-4
Description: NF4317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4317-Insertion-4 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 42738261 - 42738498
Alignment:
| Q |
1 |
atatatataccgctattataactttataagtggtctaacgcatactagtacttaaaatatgtcttgcttcgtctcttggtaataaatgtttatggtcctt |
100 |
Q |
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| T |
42738261 |
atatatataccgctattataactttataagtggtctaacgcatactagtacttaaaatatgtcttgcttcgtctcatggtaataaatgtttatggtcctt |
42738360 |
T |
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| Q |
101 |
ctcattttttcgatnnnnnnnctaggcttaattgatatgagtttagtgaagnnnnnnnntagtactttctattaagcgacaacatcaatcaagtctttac |
200 |
Q |
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|||||||||||||| | ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |
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| T |
42738361 |
ctcattttttcgataaaaaaa-ttggcttaattgatatgagtttagtgaagaaaaaaaaatgtacttactattaagcgacaacatcaatcaagtctttac |
42738459 |
T |
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| Q |
201 |
----tatagaaataaaaaggtcatgagtttttatttctg |
235 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
42738460 |
catagatagaaataaaaaggtcatgagtttttatttctg |
42738498 |
T |
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