View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4318_low_5 (Length: 299)
Name: NF4318_low_5
Description: NF4318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4318_low_5 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 19 - 299
Target Start/End: Original strand, 6349460 - 6349740
Alignment:
| Q |
19 |
tattgtgcatccacaaattagtcatgacattgtcacattgacttatggttttccagtcctctaataatactcttaactttggtggcatatttgttgagtt |
118 |
Q |
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| T |
6349460 |
tattgtgcatccacaaattagtcatgacattgtcacattgacttatggctttccagtcctctaataatactcttaactttggtggcatatttgttgtgtt |
6349559 |
T |
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| Q |
119 |
tctttgacttccccttttgggaaatgtcaattggtttgctaaccaatctttggtcatcaacccgtgttggtttgttatagttcattctataatgtctaac |
218 |
Q |
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| T |
6349560 |
tctttgacttccccttttgggaaatgtcaattggtttgctaaccaatctttggtcatcaacccgtgttggtttgttatagttcattctataatgtctaac |
6349659 |
T |
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| Q |
219 |
atattcatcacaatgaggccgcaacaagtttcattttggagtcgacggaaaacatgagattttgtggtggcaagttttgtt |
299 |
Q |
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| T |
6349660 |
atattcatcacaatgaggccgcaacaagtttcattttggagtcgacggaaaacatgagattttgtggtggcaagttttgtt |
6349740 |
T |
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