View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4318_low_7 (Length: 238)
Name: NF4318_low_7
Description: NF4318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4318_low_7 |
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Alignment Details
Target: chr3 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 53089513 - 53089751
Alignment:
| Q |
1 |
tcttctttagctttctctagattttctcgtgtttcctccagctcagctgtaacgttttcaacccttgaagactgatcaaccccattttcatttgctccat |
100 |
Q |
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| T |
53089513 |
tcttctttagctttctctagattttctcgtgtctcctccagctcagctgtaacgttttcaacccttgaagactgatcaaccccattttcatttgctccat |
53089612 |
T |
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| Q |
101 |
tgtgaatctat----------------agacgaacaacaataaactattaatcatgtgtggaagtgtaaattttaaaccataaacaagtgatcatgagga |
184 |
Q |
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| T |
53089613 |
tgtgaatctatatattagaagacatggagacgaacaacaataaattattaatcatgtgtggaagtgtaaattttaaaccataaacaagtgatcatgagga |
53089712 |
T |
|
| Q |
185 |
aattagactgtcagataatccttattaatctctaagatg |
223 |
Q |
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|||||||| ||||||||||||| |||||||||||||||| |
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| T |
53089713 |
aattagaccgtcagataatcctaattaatctctaagatg |
53089751 |
T |
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