View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4321-Insertion-1 (Length: 94)
Name: NF4321-Insertion-1
Description: NF4321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4321-Insertion-1 |
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| [»] chr6 (1 HSPs) |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 80; Significance: 4e-38; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 80; E-Value: 4e-38
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 26537186 - 26537100
Alignment:
| Q |
7 |
agatttctggaacaaatacttcaaagctgaatatctccatagtaccaaaaatagctattgcagcagctgctgaggctgctgaagatga |
94 |
Q |
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| T |
26537186 |
agatttctggaacaaatacttcaaagctgaatatctccatagtaccaaaaat-gctattgcagcagctgctgaggctgctgaagatga |
26537100 |
T |
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Target: chr1 (Bit Score: 72; Significance: 2e-33; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 72; E-Value: 2e-33
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 40351038 - 40350952
Alignment:
| Q |
7 |
agatttctggaacaaatacttcaaagctgaatatctccatagtaccaaaaatagctattgcagcagctgctgaggctgctgaagatga |
94 |
Q |
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| T |
40351038 |
agatttctggaacaaatactttaaagctgaatatctccatagtaccaaaaat-gctattgcagcagctgccgaggctgctgaagatga |
40350952 |
T |
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