View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4321-Insertion-5 (Length: 202)
Name: NF4321-Insertion-5
Description: NF4321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4321-Insertion-5 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 6426720 - 6426921
Alignment:
| Q |
1 |
acatacacaacctggtgtttctctcctccttatttaaacaatncatcttcctcgtgaactgtcaaaggtttagagcctgtaccctttctgttcctgtttt |
100 |
Q |
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| T |
6426720 |
acatgcacaacctggtgtttctctcctccttatttaaacaattcatcttcctcgtgaactgtcaaaggtttagagcctgtaccctttctgttcctgtttt |
6426819 |
T |
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| Q |
101 |
cttgactgtaacaacttcttccacctttccattgataatacaaaaagcttccaactttgaaccatttctttgtctctctgtttcaaaatgggaagtgtga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6426820 |
cttgactgtaacaacttcttccacctttccattgataatacaaaaagcttccaactttgaaccatttctttgtctctctgtttcaaaatgggaagtgtga |
6426919 |
T |
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| Q |
201 |
ac |
202 |
Q |
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| T |
6426920 |
ac |
6426921 |
T |
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