View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4321_low_6 (Length: 239)
Name: NF4321_low_6
Description: NF4321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4321_low_6 |
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Alignment Details
Target: chr5 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 14855794 - 14855667
Alignment:
| Q |
13 |
cagagaggaaaagaataattagaaaatgacatagagtaattagaaataagacaacgtacttggtgtagaaatataggcttcctcaattttggtgcacaat |
112 |
Q |
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| T |
14855794 |
cagagaggaaaagaataattagaaaatgacatagagtaattagaaataagacaacgtacttggtgtagaaatataggcttcctcaattttggtgcacaat |
14855695 |
T |
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| Q |
113 |
ttgagcatgtcgtgtgtattaaccgaca |
140 |
Q |
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| T |
14855694 |
ttgagcatgtcgtgtgtattaaccgaca |
14855667 |
T |
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