View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4322-Insertion-3 (Length: 131)
Name: NF4322-Insertion-3
Description: NF4322
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4322-Insertion-3 |
 | |
|
| [»] scaffold0006 (6 HSPs) |
| |
|
| [»] chr1 (12 HSPs) |
| |
|
| [»] chr8 (8 HSPs) |
| |
|
| [»] scaffold0068 (1 HSPs) |
| | |
|
| [»] chr6 (3 HSPs) |
| |
|
| [»] scaffold0012 (1 HSPs) |
| |
|
| [»] scaffold0069 (2 HSPs) |
| | |
|
| [»] scaffold0460 (2 HSPs) |
| | |
|
Alignment Details
Target: scaffold0006 (Bit Score: 127; Significance: 5e-66; HSPs: 6)
Name: scaffold0006
Description:
Target: scaffold0006; HSP #1
Raw Score: 127; E-Value: 5e-66
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 210536 - 210666
Alignment:
| Q |
1 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatcca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
210536 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactattca |
210635 |
T |
|
| Q |
101 |
atcttccaaaactgaagcatgtatggaaaga |
131 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
210636 |
atcttccaaaactgaagcatgtatggaaaga |
210666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #2
Raw Score: 126; E-Value: 2e-65
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 174805 - 174934
Alignment:
| Q |
2 |
attgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatccaa |
101 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
174805 |
attgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattaaaactatccaa |
174904 |
T |
|
| Q |
102 |
tcttccaaaactgaagcatgtatggaaaga |
131 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
174905 |
tcttccaaaactgaagcatgtatggaaaga |
174934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #3
Raw Score: 126; E-Value: 2e-65
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 190213 - 190342
Alignment:
| Q |
2 |
attgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatccaa |
101 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
190213 |
attgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattaaaactatccaa |
190312 |
T |
|
| Q |
102 |
tcttccaaaactgaagcatgtatggaaaga |
131 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
190313 |
tcttccaaaactgaagcatgtatggaaaga |
190342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #4
Raw Score: 115; E-Value: 8e-59
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 118406 - 118536
Alignment:
| Q |
1 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatcca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| || |
|
|
| T |
118406 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaaaaaattaaaactattca |
118505 |
T |
|
| Q |
101 |
atcttccaaaactgaagcatgtatggaaaga |
131 |
Q |
| |
|
|||||||||||||||| |||||||||||||| |
|
|
| T |
118506 |
atcttccaaaactgaaacatgtatggaaaga |
118536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #5
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 142706 - 142836
Alignment:
| Q |
1 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatcca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||| | ||||||||| ||||| |||||||||||||||||||||| || || |||| | |
|
|
| T |
142706 |
gattgtaattcattagaagcagtttttgatttgaaagatgaatttgccaaagaaattgttgtgcggaattctactcaattgaagaaactaaaaatatcta |
142805 |
T |
|
| Q |
101 |
atcttccaaaactgaagcatgtatggaaaga |
131 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
142806 |
atcttccaaaactgaagcatgtatggaaaga |
142836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #6
Raw Score: 76; E-Value: 1e-35
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 113631 - 113758
Alignment:
| Q |
1 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatcca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||| | ||||||||| ||| |||||||||| |||| | ||||||||| ||||||| | |
|
|
| T |
113631 |
gattgtaattcattagaagcagtttttgatttgaaagatgaatttgccaaagaaattgttgtccagaattctagtcaactcaagaaattaaaactatcta |
113730 |
T |
|
| Q |
101 |
atcttccaaaactgaagcatgtatggaa |
128 |
Q |
| |
|
||||||||||||||| |||||||||||| |
|
|
| T |
113731 |
atcttccaaaactgaggcatgtatggaa |
113758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 126; Significance: 2e-65; HSPs: 12)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 126; E-Value: 2e-65
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 13677223 - 13677352
Alignment:
| Q |
2 |
attgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatccaa |
101 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
13677223 |
attgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattaaaactatccaa |
13677322 |
T |
|
| Q |
102 |
tcttccaaaactgaagcatgtatggaaaga |
131 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
13677323 |
tcttccaaaactgaagcatgtatggaaaga |
13677352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 97; E-Value: 4e-48
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 13596061 - 13596189
Alignment:
| Q |
1 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatcca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||| | ||||||||| ||||||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
13596061 |
gattgtaattcattagaagcagtttttgatttgaaagatgaatttgccaaagaaattgttgtgcagaattctactcaattgaagaaattaaaactatcta |
13596160 |
T |
|
| Q |
101 |
atcttccaaaactgaagcatgtatggaaa |
129 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
13596161 |
atcttccaaaactgaagcatgtatggaaa |
13596189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 13652945 - 13653075
Alignment:
| Q |
1 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatcca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||| | ||||||||| ||||| |||||||||||||||||||||| || || |||| | |
|
|
| T |
13652945 |
gattgtaattcattagaagcagtttttgatttgaaagatgaatttgccaaagaaattgttgtgcggaattctactcaattgaagaaactaaaaatatcta |
13653044 |
T |
|
| Q |
101 |
atcttccaaaactgaagcatgtatggaaaga |
131 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
13653045 |
atcttccaaaactgaagcatgtatggaaaga |
13653075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 85; E-Value: 6e-41
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 13552326 - 13552454
Alignment:
| Q |
1 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatcca |
100 |
Q |
| |
|
|||||| ||||||||||||| |||||| ||||||||| |||||| | ||||||||| ||||||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
13552326 |
gattgtgattcattagaagctgttttttatttgaaagatgaatttgccaaagaaattgttgtgcagaattctactcaattgaagaaattaaaactatcta |
13552425 |
T |
|
| Q |
101 |
atcttccaaaactgaagcatgtatggaaa |
129 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
13552426 |
atcttccaaaactgaagcatgtatggaaa |
13552454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 84; E-Value: 2e-40
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 16454314 - 16454187
Alignment:
| Q |
1 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatcca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||| || ||||||||| |||| ||||||||| ||||||||||||| || ||||||| | |
|
|
| T |
16454314 |
gattgtaattcattagaagcagtttttgatttgaaagatgaatttgcaaaagaaattgttgtgaagaattctagtcaattgaagaaactaaaactatcta |
16454215 |
T |
|
| Q |
101 |
atcttccaaaactgaagcatgtatggaa |
128 |
Q |
| |
|
|| ||||||||||||||||||||||||| |
|
|
| T |
16454214 |
atgttccaaaactgaagcatgtatggaa |
16454187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 84; E-Value: 2e-40
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 16463471 - 16463344
Alignment:
| Q |
1 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatcca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||| || ||||||||| |||| ||||||||| ||||||||||||| || ||||||| | |
|
|
| T |
16463471 |
gattgtaattcattagaagcagtttttgatttgaaagatgaatttgcaaaagaaattgttgtgaagaattctagtcaattgaagaaactaaaactatcta |
16463372 |
T |
|
| Q |
101 |
atcttccaaaactgaagcatgtatggaa |
128 |
Q |
| |
|
|| ||||||||||||||||||||||||| |
|
|
| T |
16463371 |
atgttccaaaactgaagcatgtatggaa |
16463344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 84; E-Value: 2e-40
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 20377514 - 20377641
Alignment:
| Q |
1 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatcca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||| | ||||||||| |||||||||||||| |||| ||||||||||| ||||||| | |
|
|
| T |
20377514 |
gattgtaattcattagaagcagtttttgatttgaaagatgaattttccaaagaaattgttgtgcagaattctagtcaactgaagaaattaaaactatcta |
20377613 |
T |
|
| Q |
101 |
atcttccaaaactgaagcatgtatggaa |
128 |
Q |
| |
|
||||||||||||||| |||||||||||| |
|
|
| T |
20377614 |
atcttccaaaactgaggcatgtatggaa |
20377641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 13516850 - 13516980
Alignment:
| Q |
1 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatcca |
100 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| |||||| | |||||||||| ||||||| |||| ||||| ||||||||||| ||||||| | |
|
|
| T |
13516850 |
gattgtaattcattagaagctgtttttgatttgaaagatgaatttgccaaagaaattgcggtgcagagttcttctcaactgaagaaattaaaactatcta |
13516949 |
T |
|
| Q |
101 |
atcttccaaaactgaagcatgtatggaaaga |
131 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
13516950 |
atcttccaaaactgaagcatgtatggaaaga |
13516980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 20486031 - 20486158
Alignment:
| Q |
1 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatcca |
100 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| | |||||| | ||||||||| ||| |||||||| | |||||||||||||||| ||||||| | |
|
|
| T |
20486031 |
gattgtgattcattagaagcagtttttgatttgaatgatgaatttgccaaagaaattgttgttcagaattcaagtcaattgaagaaattaaaactatcta |
20486130 |
T |
|
| Q |
101 |
atcttccaaaactgaagcatgtatggaa |
128 |
Q |
| |
|
|||||||||| ||||||||||||||||| |
|
|
| T |
20486131 |
atcttccaaatctgaagcatgtatggaa |
20486158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 4 - 128
Target Start/End: Complemental strand, 15896293 - 15896169
Alignment:
| Q |
4 |
tgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatccaatc |
103 |
Q |
| |
|
||||||||||| || |||||||||||||||||||||||||| | ||||||| ||||||||||| || |||||||||||||||| ||||||| |||| |
|
|
| T |
15896293 |
tgtaattcattggaggcagtttttgatttgaaaggtgaatttgtcaaggaaattgttgtgcagaattatagtcaattgaagaaattaaaactatctaatc |
15896194 |
T |
|
| Q |
104 |
ttccaaaactgaagcatgtatggaa |
128 |
Q |
| |
|
||||||||||||| ||||||||||| |
|
|
| T |
15896193 |
ttccaaaactgaaacatgtatggaa |
15896169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 68; E-Value: 9e-31
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 16492402 - 16492275
Alignment:
| Q |
1 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatcca |
100 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||| |||||| || ||||| || |||| ||||||||| |||||||||||||||| ||||||| | |
|
|
| T |
16492402 |
gattgtaattcattagaagcagttttttattatgaagatgaatttgcaaaagaagttcttgtgaagaattctagtcaattgaagaaattaaaactatcta |
16492303 |
T |
|
| Q |
101 |
atcttccaaaactgaagcatgtatggaa |
128 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
16492302 |
atcttccaaaactgaagcatgtatggaa |
16492275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 57; E-Value: 3e-24
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 20511067 - 20510946
Alignment:
| Q |
1 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatcca |
100 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| |||||| | ||||| ||||||||||||| ||| ||||||||||| ||||||| | |
|
|
| T |
20511067 |
gattgtaattcattagaagcaatttttgatttgaaagatgaatttgccaaagaa------gtgcagaattctagtcacctgaagaaattaaaactatcta |
20510974 |
T |
|
| Q |
101 |
atcttccaaaactgaagcatgtatggaa |
128 |
Q |
| |
|
||||||||||||||| |||||||||||| |
|
|
| T |
20510973 |
atcttccaaaactgaggcatgtatggaa |
20510946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 115; Significance: 8e-59; HSPs: 8)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 115; E-Value: 8e-59
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 20842011 - 20841881
Alignment:
| Q |
1 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatcca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| || |
|
|
| T |
20842011 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaaaaaattaaaactattca |
20841912 |
T |
|
| Q |
101 |
atcttccaaaactgaagcatgtatggaaaga |
131 |
Q |
| |
|
|||||||||||||||| |||||||||||||| |
|
|
| T |
20841911 |
atcttccaaaactgaaacatgtatggaaaga |
20841881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 104; E-Value: 3e-52
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 20850110 - 20849975
Alignment:
| Q |
1 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaatt-----gctgtgcagaattctactcaattgaagaaattagaact |
95 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||| |||| |
|
|
| T |
20850110 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaatttacagaagaaattaaattgccgtgcagaattctactcaattgaagaaattaaaact |
20850011 |
T |
|
| Q |
96 |
atccaatcttccaaaactgaagcatgtatggaaaga |
131 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
20850010 |
atccaatcttccaaaactgaagcatgtatggaaaga |
20849975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 95; E-Value: 7e-47
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 20769453 - 20769327
Alignment:
| Q |
2 |
attgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatccaa |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||| | ||||||||| ||||||||||||||||||||||||||||||| ||||||| || |
|
|
| T |
20769453 |
attgtaattcattagaagcagtttttgatttgaaagatgaatttgccaaagaaattgttgtgcagaattctactcaattgaagaaattaaaactatctaa |
20769354 |
T |
|
| Q |
102 |
tcttccaaaactgaagcatgtatggaa |
128 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
20769353 |
tcttccaaaactgaagcatgtatggaa |
20769327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 95; E-Value: 7e-47
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 20779247 - 20779121
Alignment:
| Q |
2 |
attgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatccaa |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||| | ||||||||| ||||||||||||||||||||||||||||||| ||||||| || |
|
|
| T |
20779247 |
attgtaattcattagaagcagtttttgatttgaaagatgaatttgccaaagaaattgttgtgcagaattctactcaattgaagaaattaaaactatctaa |
20779148 |
T |
|
| Q |
102 |
tcttccaaaactgaagcatgtatggaa |
128 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
20779147 |
tcttccaaaactgaagcatgtatggaa |
20779121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 85; E-Value: 6e-41
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 20806331 - 20806203
Alignment:
| Q |
1 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatcca |
100 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||||| |||||| | ||||||||| |||||| |||||||||||||||||||||||| ||||||| | |
|
|
| T |
20806331 |
gattgtgattcattagaagcagtttttgattcgaaagatgaatttgccaaagaaattgttgtgcaaaattctactcaattgaagaaattaaaactatcta |
20806232 |
T |
|
| Q |
101 |
atcttccaaaactgaagcatgtatggaaa |
129 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
20806231 |
atcttccaaaactgaagcatgtatggaaa |
20806203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 20772403 - 20772273
Alignment:
| Q |
1 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatcca |
100 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| |||||| | ||||||||| ||||||||||||| ||||| ||||||||||| || |||| | |
|
|
| T |
20772403 |
gattgtaattcattagaagctgtttttgatttgaaagatgaatttgccaaagaaattgttgtgcagaattcttctcaactgaagaaattaaaattatcta |
20772304 |
T |
|
| Q |
101 |
atcttccaaaactgaagcatgtatggaaaga |
131 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
20772303 |
atcttccaaaactgaagcatgtatggaaaga |
20772273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 20835243 - 20835116
Alignment:
| Q |
1 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatcca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | |||||| | ||||||||| |||||||||||||| |||| ||||||||||| ||||||| | |
|
|
| T |
20835243 |
gattgtaattcattagaagcagtttttgatttgaaggatgaatttgccaaagaaattgttgtgcagaattctagtcaactgaagaaattaaaactatcta |
20835144 |
T |
|
| Q |
101 |
atcttccaaaactgaagcatgtatggaa |
128 |
Q |
| |
|
||||||||||||||| |||||||||||| |
|
|
| T |
20835143 |
atcttccaaaactgaggcatgtatggaa |
20835116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 20782197 - 20782067
Alignment:
| Q |
1 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatcca |
100 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| |||||| | ||||||||| |||||||| |||| ||||| ||||||||||| || |||| | |
|
|
| T |
20782197 |
gattgtaattcattagaagctgtttttgatttgaaagatgaatttgccaaagaaattgttgtgcagagttcttctcaactgaagaaattaaaattatcta |
20782098 |
T |
|
| Q |
101 |
atcttccaaaactgaagcatgtatggaaaga |
131 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
20782097 |
atcttccaaaactgaagcatgtatggaaaga |
20782067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0068 (Bit Score: 109; Significance: 3e-55; HSPs: 1)
Name: scaffold0068
Description:
Target: scaffold0068; HSP #1
Raw Score: 109; E-Value: 3e-55
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 34469 - 34341
Alignment:
| Q |
1 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatcca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
34469 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcgcagaagaaattgtggtgcagaattctactcaattgaagaaattaaaactatcta |
34370 |
T |
|
| Q |
101 |
atcttccaaaactgaagcatgtatggaaa |
129 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
34369 |
atcttccaaaactgaagcatgtatggaaa |
34341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 99; Significance: 3e-49; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 99; E-Value: 3e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 21816716 - 21816846
Alignment:
| Q |
1 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatcca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||| |||||||||||||| ||||||||| ||||||| | |
|
|
| T |
21816716 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaatttgcaaaagaaattgttgtgcataattctactcaattaaagaaattaaaactatcta |
21816815 |
T |
|
| Q |
101 |
atcttccaaaactgaagcatgtatggaaaga |
131 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
21816816 |
atcttccaaaactgaagcatgtatggaaaga |
21816846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 4 - 128
Target Start/End: Complemental strand, 22273951 - 22273827
Alignment:
| Q |
4 |
tgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatccaatc |
103 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| || ||||||||| | |||| ||||||||||||||| | |||||| ||||||| |||| |
|
|
| T |
22273951 |
tgtaattcattagaagcagtttttgatttgacaggtgaatttgcaaaagaaattgttttgcataattctactcaattgcaaaaattaaaactatctaatc |
22273852 |
T |
|
| Q |
104 |
ttccaaaactgaagcatgtatggaa |
128 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
22273851 |
ttccaaaactgaagcatgtatggaa |
22273827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 22278717 - 22278663
Alignment:
| Q |
4 |
tgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattg |
58 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| || ||||||||| |
|
|
| T |
22278717 |
tgtaattcattagaagcagtttttgatttgacaggtgaatttgcaaaagaaattg |
22278663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 96; Significance: 2e-47; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 38055258 - 38055131
Alignment:
| Q |
1 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatcca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || || ||||||||||||||||||||||||| ||||||| | |
|
|
| T |
38055258 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaatttgcagaagaaattgttgagcggaattctactcaattgaagaaattaaaactatcta |
38055159 |
T |
|
| Q |
101 |
atcttccaaaactgaagcatgtatggaa |
128 |
Q |
| |
|
||||||||||| |||||||||||||||| |
|
|
| T |
38055158 |
atcttccaaaattgaagcatgtatggaa |
38055131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 30703109 - 30702979
Alignment:
| Q |
1 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatcca |
100 |
Q |
| |
|
|||| |||||||||||||||||||||| |||||| ||||||||| || || | |||| ||||||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
30703109 |
gattttaattcattagaagcagtttttaatttgagaggtgaatttgcaaaatatattgttgtgcagaattctactcaattgaagaaattaaaactatcta |
30703010 |
T |
|
| Q |
101 |
atcttccaaaactgaagcatgtatggaaaga |
131 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |
|
|
| T |
30703009 |
atcttccaaaactgaagcatgtatcgaaaga |
30702979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 38053060 - 38052930
Alignment:
| Q |
1 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatcca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||| | ||||| ||| |||||| ||||||| |||||||||||||||| ||||||| | |
|
|
| T |
38053060 |
gattgtaattcattagaagcagtttttgatttgagaggtgaatctccgaaagaagttgttgtgcaaaattctagtcaattgaagaaattaaaactatcta |
38052961 |
T |
|
| Q |
101 |
atcttccaaaactgaagcatgtatggaaaga |
131 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
38052960 |
atcttccaaaactgaagcatgtatggaaaga |
38052930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012 (Bit Score: 91; Significance: 2e-44; HSPs: 1)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 120411 - 120532
Alignment:
| Q |
1 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatcca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
120411 |
gattgtaattcattagaagcagtttttgat---------gaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactattca |
120501 |
T |
|
| Q |
101 |
atcttccaaaactgaagcatgtatggaaaga |
131 |
Q |
| |
|
|||| |||||||||||||||||||||||||| |
|
|
| T |
120502 |
atctaccaaaactgaagcatgtatggaaaga |
120532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0069 (Bit Score: 84; Significance: 2e-40; HSPs: 2)
Name: scaffold0069
Description:
Target: scaffold0069; HSP #1
Raw Score: 84; E-Value: 2e-40
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 47816 - 47943
Alignment:
| Q |
1 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatcca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||| | ||||||||| |||||||||||||| |||| ||||||||||| ||||||| | |
|
|
| T |
47816 |
gattgtaattcattagaagcagtttttgatttgaaagatgaattttccaaagaaattgttgtgcagaattctagtcaactgaagaaattaaaactatcta |
47915 |
T |
|
| Q |
101 |
atcttccaaaactgaagcatgtatggaa |
128 |
Q |
| |
|
||||||||||||||| |||||||||||| |
|
|
| T |
47916 |
atcttccaaaactgaggcatgtatggaa |
47943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0069; HSP #2
Raw Score: 68; E-Value: 9e-31
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 42140 - 42267
Alignment:
| Q |
1 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatcca |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||||||| | |||||| | ||||||||| |||||||||||||| |||| ||||||||||| ||||||| | |
|
|
| T |
42140 |
gattgtgattcatcagaagcagtttttgatttgaacgatgaatttgccaaagaaattgttgtgcagaattctagtcaactgaagaaattaaaactatcta |
42239 |
T |
|
| Q |
101 |
atcttccaaaactgaagcatgtatggaa |
128 |
Q |
| |
|
||||| ||||||||| |||||||||||| |
|
|
| T |
42240 |
atctttcaaaactgaggcatgtatggaa |
42267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0460 (Bit Score: 72; Significance: 4e-33; HSPs: 2)
Name: scaffold0460
Description:
Target: scaffold0460; HSP #1
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 7020 - 7147
Alignment:
| Q |
1 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatcca |
100 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| | |||||| | ||||||||| ||| |||||||| | |||||||||||||||| ||||||| | |
|
|
| T |
7020 |
gattgtgattcattagaagcagtttttgatttgaatgatgaatttgccaaagaaattgttgttcagaattcaagtcaattgaagaaattaaaactatcta |
7119 |
T |
|
| Q |
101 |
atcttccaaaactgaagcatgtatggaa |
128 |
Q |
| |
|
|||||||||| ||||||||||||||||| |
|
|
| T |
7120 |
atcttccaaatctgaagcatgtatggaa |
7147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0460; HSP #2
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 11585 - 11712
Alignment:
| Q |
1 |
gattgtaattcattagaagcagtttttgatttgaaaggtgaattcacagaagaaattgctgtgcagaattctactcaattgaagaaattagaactatcca |
100 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| | |||||| | ||||||||| ||| |||||||| | |||||||||||||||| ||||||| | |
|
|
| T |
11585 |
gattgtgattcattagaagcagtttttgatttgaatgatgaatttgccaaagaaattgttgttcagaattcaagtcaattgaagaaattaaaactatcta |
11684 |
T |
|
| Q |
101 |
atcttccaaaactgaagcatgtatggaa |
128 |
Q |
| |
|
|||||||||| ||||||||||||||||| |
|
|
| T |
11685 |
atcttccaaatctgaagcatgtatggaa |
11712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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