View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4324_high_7 (Length: 238)
Name: NF4324_high_7
Description: NF4324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4324_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 5060301 - 5060502
Alignment:
| Q |
18 |
ggttatagaaacgttacttaagaaattgatcgcagctagtatagagtattatattattttcataaaagtatgagttgtatttaatttgagaaaaataatt |
117 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5060301 |
ggttatagaaacgttacttaagaaattgatctcagctagtatagagtattatattattttcataaaagtatgagttgtatttaatttgagaaaaataatt |
5060400 |
T |
|
| Q |
118 |
agtgacaattcaaaattcaaacattattgaaaatttgaagtgaggtaaacgggaaggagtggacatgttcattaactgacatggtccttcttctctgcag |
217 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5060401 |
agtgacaattcaaaattcaaacgttattgaaaatttgaagtgaggtaaacgggaaggagtggacatgttcattaactgacatggtccttcttctctgcag |
5060500 |
T |
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| Q |
218 |
ag |
219 |
Q |
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|| |
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| T |
5060501 |
ag |
5060502 |
T |
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