View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4324_low_10 (Length: 250)
Name: NF4324_low_10
Description: NF4324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4324_low_10 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 9 - 250
Target Start/End: Complemental strand, 48159544 - 48159303
Alignment:
| Q |
9 |
agcagagaaaagtgaagaagtactgcacttcccaaataatttgagaaatgaattgattatctttattatttggtgatttgagtgaatttagtgtatttgt |
108 |
Q |
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| T |
48159544 |
agcagagaaaagtgaagaagtactgcacttcccaaataatttgagaaatgaattgattatctttattatttggtgatttgagtgaatttagtgtatttgt |
48159445 |
T |
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| Q |
109 |
gagataaatgatgaatgattaaaatagactgtttaaatcagaatgaatgatttgttaaaaaatgagataagagataaatttaccaaactcaccaaaattc |
208 |
Q |
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| T |
48159444 |
gagataaatgatgaatgattaaaatagactgtttaaatcagaatgaatgatttgttaaaaaatgagataagagataaatttaccaaactcaccaaaattc |
48159345 |
T |
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| Q |
209 |
aaagtaaacaaataatttgtatatgatgaacaatggtgtttt |
250 |
Q |
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| T |
48159344 |
aaagtaaacaaataatttgtatatgatgaacaatggtgtttt |
48159303 |
T |
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