View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4324_low_7 (Length: 426)
Name: NF4324_low_7
Description: NF4324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4324_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 10 - 409
Target Start/End: Original strand, 37194776 - 37195192
Alignment:
| Q |
10 |
agaacctgtggataatatatacgactattttgtgtaaggaataatatactaagccttgttattgcttaatttattttaaataaattgtaatttttaaact |
109 |
Q |
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| T |
37194776 |
agaaactgtggataatatatacgactattttgtgtaaggaataatatactaagccttgttattgcttaatttattttaaataaactgtaatttttaaact |
37194875 |
T |
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| Q |
110 |
cgttaaataaattccagatagt----------------tctggactataaattgtaatttttgcactcgttaatatagaagatgtcatttgtgagaagca |
193 |
Q |
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| T |
37194876 |
cgttaaataaattccagatagtgataaaaaatttataatctcgactataaattgtaatttttgcactcgttaatatagaagatgtcatttgtgagaagca |
37194975 |
T |
|
| Q |
194 |
ttcaaattgtgtcgatacaatttcgatcttgtgactataattctcatctctcaaattacaatttgatgtatcaattgattgaatatcagttaaaatcaaa |
293 |
Q |
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| T |
37194976 |
ttcaaattgtgtcgatacaatttcgatcttgtgactataattctcatctctcaaattacaatttgatgtatcaagtgattgaatatcagttaaaatcaaa |
37195075 |
T |
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| Q |
294 |
tcatttgatataaattgagtataaatctttagtaaaacaatttttgatcgaacnnnnnnnatctctgtgttgataccaggtggtcaaga-cccccttcct |
392 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||| |||||||||| |
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| T |
37195076 |
tcatttgatataaattgagtataaatctttagtaaaacaatttttgatcgaactttttttatctctatgttgataccaggttgtcaagaccccccttcct |
37195175 |
T |
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| Q |
393 |
tgaaaactgagggttac |
409 |
Q |
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| T |
37195176 |
tgaaaactgagggttac |
37195192 |
T |
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