View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4325_high_4 (Length: 305)
Name: NF4325_high_4
Description: NF4325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4325_high_4 |
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Alignment Details
Target: chr2 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 11 - 288
Target Start/End: Original strand, 43740694 - 43740974
Alignment:
| Q |
11 |
ttatactaaattcaaaatttgttgacttaactatctatatattgagcagcaagctttattattttactttaaacaaacaaagannnnnnnnnn---ccgt |
107 |
Q |
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| T |
43740694 |
ttatactaaattcaaaatttgttgacttaactatctatatattgagcagcaagctttattattttactttaaacaaacaaagattattttttttttccgt |
43740793 |
T |
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| Q |
108 |
tccgaagttttaattattagtattgttaaagaatcaaagcatatgcactatatatgaaacgtgtgcgtatatatacaccaacaggcataacaacacaata |
207 |
Q |
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| T |
43740794 |
tccaaagttttaattattagtattgttaaagaatcaaagcatatgcactatatatgaaacgtgtgcgtatatatacaccaacaggcataacaacacaata |
43740893 |
T |
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| Q |
208 |
gagtttagaaccttaatatcagtagttcgacatttttcttggtccaggaccaggaagtacctcgtactttgctatagttaa |
288 |
Q |
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| T |
43740894 |
gagtttagaaccttaatatcagtagttcgacatttttcttggtccaggaccaggaagtacctcgtactttgctatagttaa |
43740974 |
T |
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