View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4325_low_1 (Length: 1304)
Name: NF4325_low_1
Description: NF4325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4325_low_1 |
 | |
|
| [»] scaffold1360 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 1110; Significance: 0; HSPs: 22)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 1110; E-Value: 0
Query Start/End: Original strand, 12 - 1282
Target Start/End: Complemental strand, 4010305 - 4009025
Alignment:
| Q |
12 |
atcatcaatctagtgttgaagaggttgagtaagcacccagttaactcaaaaggacttgttggaattgacaaatcaattgcacatttgaattcattgttac |
111 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4010305 |
atcatcaatctattgttgaagaggttgagtaagcacccagttaactcaaaaggacttattggaattgacaaatcaattgcacatttgaattcattgttac |
4010206 |
T |
|
| Q |
112 |
aaaaagagtcagaaaaggtccgtgtcattggaatttggggcatgggaggtattggcaagacaactattgcaggagaaatttttaactaaaattgctctga |
211 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
4010205 |
aaaaagagtcagaaaaggtcagtgtcattggaatttggggcatgggaagtattggcaagacaactattgcaggagaaatttttaaccaaaattgctctga |
4010106 |
T |
|
| Q |
212 |
atatgaaggttgttgttttttggaaaaggtaagcgagcaattaggaagacatggaataacatttttgaaagaaaaacttttttctacactattagcagaa |
311 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4010105 |
atatgaaggttgttgttttttggaaaaggtaagcgagcaattaggaagacatggaagaacatttttgaaagaaaaacttttttctacactattagcagaa |
4010006 |
T |
|
| Q |
312 |
gatgtgaaaatccgttcgccaaatgggttgtctaattatactgtgagaaggattggtcgtatgaaggttcttattgttcttgatgatgttaaggaagaaa |
411 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4010005 |
gatgtgaaaatccgttcgccaaatgggttgtctaattatactgtgagaaggattggtcgtatgaaggttcttattgttcttgatgatgttaaggaagaag |
4009906 |
T |
|
| Q |
412 |
gtcagctagagatgttatttggaactcttgattggtttcgatctgatagtagaataattttaacaactagagataagcaagtacttattgctaatgaagt |
511 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4009905 |
gtcagctagagatgttatttagaactcttgattggtttcgatccgatagtagaataattttaacaactagagataagcaagtacttattgctaatgaagt |
4009806 |
T |
|
| Q |
512 |
tgaagatgatgatctatatcaggttggggtattggactctagtgaagcacttgagcttttcaatttgaatgcctttaaacaaagtcatcttgaaatggag |
611 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4009805 |
tgaagatgatgatctatatcaggttggggtattggattctagtgaagcacttgagcttttcaatttgaatgcctttaaacaaagtcatcttgaaatggag |
4009706 |
T |
|
| Q |
612 |
tactatgatctatcaaagaaggtggtcgattatgccaaaggaattccattagttcttgaagttttggctcatctacttcgtggaaaagaca--------- |
702 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4009705 |
tactatgatctatcaaagaaagtggtcgattatgccaaaggaattccattagttcttgaagttttggctcatctacttcgtggaaaagacaaggaagaat |
4009606 |
T |
|
| Q |
703 |
-ggaaagtcagctggacaaacttgaaagactgccaaataaaaaatttcaagatgtaatgaggctcagttatgatgatcttgatcgtttagagcaaaagta |
801 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4009605 |
gggaaagtcagctggacaaacttaaaagactgccgaataaaaaaattcaagatgtaatgaggctcagttatgatgatcttgatcgtttagagcaaaagta |
4009506 |
T |
|
| Q |
802 |
ttttttagatattgcatgtttcttcaaagggttgaggttgaaagtggattacatgaaacttttactgaaagattttgaaagtgataatgcagtggctatt |
901 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4009505 |
ttttttagatattgcatgtttcttcaacgggttgaggttgaaagtggattgcatgaaacttttattgaaagattttgaaagtgataatgcagtggctatt |
4009406 |
T |
|
| Q |
902 |
gggttagaaaggttaaaagataaatctcttataactatttctgaagataatgttatatctatgcatgacattctacaagaaatgggtcgggaggttgttc |
1001 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4009405 |
gggttagaaaggttaaaagataaagctcttataacaatttctgaagataatgtaatatctatgcatgacattctacaagaaatgggtcgggaggttgttc |
4009306 |
T |
|
| Q |
1002 |
gtcaagaatctagtgaagaccctagaaaatgcagtcgattatgggatcctgatattatctatgatgtattgaaaaacgacaaggtataatatatttggcg |
1101 |
Q |
| |
|
|| |||||||||||||||| |||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
4009305 |
gttaagaatctagtgaagatcctataaaatgcagtcaactatgggatcctgatattatctatgatgtattgaaaaacgacaaggtaaaatatatttggca |
4009206 |
T |
|
| Q |
1102 |
attttagataacatttgtaattttggtaaaaaatattttgattttcttttacatcaatggcagggcactgatgctattagaagcatacgtgtagacttgt |
1201 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
4009205 |
attttagataacatttgtcattttggtaaaaagtattttgattttcttttacattaatggcagggcactgatgttattagaagcatacgtgtagacttgt |
4009106 |
T |
|
| Q |
1202 |
cagcaatcaggaagctgaagttaagccctcatgtatttgctaagatgaccaacctgcaatttttggattttcatgatggaa |
1282 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
4009105 |
cagcgatcaggaagctgaagttaagccctcatgtatttgctaagatgaccaacctgctatttttggattttcatggtggaa |
4009025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 676; E-Value: 0
Query Start/End: Original strand, 55 - 1276
Target Start/End: Complemental strand, 3801852 - 3800609
Alignment:
| Q |
55 |
actcaaaaggacttgttggaattgacaaatcaattgcacatttgaattcattgttacaaaaagagtcagaaaaggtccgtgtcattggaatttggggcat |
154 |
Q |
| |
|
||||| |||||||| ||||||| |||| | |||||||||||||||||||||||||| | |||||||| | |||||||||||| |||||||||||||| || |
|
|
| T |
3801852 |
actcagaaggacttattggaatggacagaccaattgcacatttgaattcattgttaaacaaagagtcgggaaaggtccgtgttattggaatttggggtat |
3801753 |
T |
|
| Q |
155 |
gggaggtattggcaagacaactattgcaggagaaatttttaactaaaattgctctgaatatgaaggttgttgttttttggaaaaggtaagcgagcaatta |
254 |
Q |
| |
|
||| ||||||||||||||||||||||||| |||||| |||||| ||||| ||| ||||||||| |||||||||||| || ||| || || | ||||| |
|
|
| T |
3801752 |
gggcggtattggcaagacaactattgcagaagaaatatttaaccaaaatcgctttgaatatgatggttgttgttttatgtcaaatgtgagtttggaatta |
3801653 |
T |
|
| Q |
255 |
ggaagacatggaataacatttttgaaagaaaaacttttttctacactattagcagaagatgtgaaaatccgttcgccaaatgggttgtctaattatactg |
354 |
Q |
| |
|
||||| | |||||||||| ||| |||||||| |||||||||| |||||| ||||||||||||||| ||| |||||||||||||||||| ||| | |
|
|
| T |
3801652 |
ggaaggcgtggaataacaatttaaaaagaaaagcttttttctaacctattaaatgaagatgtgaaaatcgattcaccaaatgggttgtctaataatattc |
3801553 |
T |
|
| Q |
355 |
tgagaaggattggtcgtatgaaggttcttattgttcttgatgatgttaaggaagaaagtcagctagagatgttatttggaactcttgattggtttcgatc |
454 |
Q |
| |
|
||||||||||| ||||||||||||||||||| |||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
3801552 |
atagaaggattggccgtatgaaggttcttattgatcttgatgatattaaggaagaaggtctgctagagatgttatttggaactcttgattggtttcaatc |
3801453 |
T |
|
| Q |
455 |
tgatagtagaataattttaacaactagagataagcaagtacttattgctaatgaagttgaagatgatgatctatatcaggttggggtattggactctagt |
554 |
Q |
| |
|
|||||||||||||||| |||||| |||||||||||||||||||||| |||||||||| | || |||||||||||| |||||||||||||||| |||||| |
|
|
| T |
3801452 |
tgatagtagaataattgtaacaagtagagataagcaagtacttattcctaatgaagtgtatgacgatgatctatatgaggttggggtattggattctagt |
3801353 |
T |
|
| Q |
555 |
gaagcacttgagcttttcaatttgaatgcctttaaacaaagtcatcttgaaatggagtactatgatctatcaaagaaggtggtcgattatgccaaaggaa |
654 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||| |||| |||||||||||| |
|
|
| T |
3801352 |
gaagcacttgagcttttcaatttgaatgcctttaaacaaagtcatcctgaaatggagtactatgagctatcaaagagggtgatcgaatatgccaaaggag |
3801253 |
T |
|
| Q |
655 |
ttccattagttcttgaagttttggctcatctacttcgtggaaaagaca----------ggaaagtcagctggacaaacttgaaagactgccaaataaaaa |
744 |
Q |
| |
|
|||||||||||||| |||||||||||||| | |||||||||||| | |||||||| ||| ||||||||| |||||||||||| | || | |
|
|
| T |
3801252 |
ttccattagttcttaaagttttggctcatatgcttcgtggaaaatgtaaagaagtatgggaaagtctgctagacaaacttaaaagactgccaattcaaga |
3801153 |
T |
|
| Q |
745 |
atttcaagatgtaatgaggctcagttatgatgatcttgatcgtttagagcaaaagtattttttagatattgcatgtttcttcaaagggttgaggttgaaa |
844 |
Q |
| |
|
| |||| ||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| |
|
|
| T |
3801152 |
agttcatgatgtaatgagactcagttatgatgatcttgatcatttagagaaaaagtattttttagatattgcatgtttcttcaatgggttgaatttgaaa |
3801053 |
T |
|
| Q |
845 |
gtggattacatgaaacttttactgaaagattttgaaagtgataatgcagtggctattgggttagaaaggttaaaagataaatctcttataactatttctg |
944 |
Q |
| |
|
||||||||||||||| ||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
3801052 |
gtggattacatgaaaattttactgaaagattgtgaaagtgataattcagtggctgttgggttagaaaggttaaaagataaagctcttataactatttct- |
3800954 |
T |
|
| Q |
945 |
aagataatgttatatctatgcatgacattctacaagaaatgggtcgggaggttgttcgtcaagaatctagtgaagaccctagaaaatgcagtcgattatg |
1044 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
3800953 |
-cgataatgttatatctatgcatgacattctatgagaaatgggtcgggaggttgttcgccaagaatatagtgaagaccctagaaaatgcagtcatttatg |
3800855 |
T |
|
| Q |
1045 |
ggatcctgatattatctatgatgtattgaaaaacgacaaggtataatatatttggcgattttagataacatttgtaattttggtaaaaaatat---tttg |
1141 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||| || ||||||||| |||| ||||||||| ||| |||||||| |||||||| ||| |
|
|
| T |
3800854 |
ggatcctgatattatctatgatgtattgaaaaatgacaaggtaaaaaatatttggctatttcagataacatatgttattttggttaaaaatatggctttc |
3800755 |
T |
|
| Q |
1142 |
a-----------ttttcttttacatcaatggcagggcactgatgctattagaagcatacgtgtagacttgtcagcaatcaggaagctgaagttaagccct |
1230 |
Q |
| |
|
| ||||||||||| | ||||| |||| |||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||| |
|
|
| T |
3800754 |
aatgattgaaatttttcttttacgttaatggtagggtactgatgctattagaagcatacgtgtagacttgtcatcatttaggaagctgaagttaagccct |
3800655 |
T |
|
| Q |
1231 |
catgtatttgctaagatgaccaacctgcaatttttggattttcatg |
1276 |
Q |
| |
|
|||||||||||||||||||||||| ||| || |||||||||||||| |
|
|
| T |
3800654 |
catgtatttgctaagatgaccaacttgcgatatttggattttcatg |
3800609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 638; E-Value: 0
Query Start/End: Original strand, 12 - 1273
Target Start/End: Complemental strand, 4025535 - 4024257
Alignment:
| Q |
12 |
atcatcaatctagtgttgaagaggttgagtaagcacccagttaactcaaaaggacttgttggaattgacaaatcaattgcacatttgaattcattgttac |
111 |
Q |
| |
|
||||||||||| ||| |||| |||||||| |||||||| ||||| ||||||||||| ||||||||| |||| |||| || ||||| | || ||||||| |
|
|
| T |
4025535 |
atcatcaatcttgtgatgaaaaggttgagcaagcaccctattaacacaaaaggacttattggaattggcaaaccaatggctcatttagaatcgttgttac |
4025436 |
T |
|
| Q |
112 |
aaaaagagtcagaaaaggtccgtgtcattggaatttggggcatgggaggtattggcaagacaactattgcaggagaaatttttaactaaaattgctctga |
211 |
Q |
| |
|
|||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||| |
|
|
| T |
4025435 |
gtcaagagtcagaaaaggttcgtgttattggaatttggggtatgggaggtattggcaagacaactattgccgaagaaatttttaaacaaaattgctctga |
4025336 |
T |
|
| Q |
212 |
atatgaaggttgttgttttttggaaaaggtaagcgagcaattaggaagacatggaataacatttttgaaagaaaaacttttttctacactattagcagaa |
311 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
4025335 |
atatgaaggttgttgttttttggcaaaggtaagtgaagaattaggaagacatggaataacatttttgaaagaaaaacttttttctagactattagcagaa |
4025236 |
T |
|
| Q |
312 |
gatgtgaaaatccgttcgccaaatgggttgtctaattatactgtgagaaggattggtcgtatgaaggttcttattgttcttgatgatgttaaggaagaaa |
411 |
Q |
| |
|
|||||||||||| ||| |||||||||||||||| ||||| || |||||||||||| ||||||||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
4025235 |
gatgtgaaaatcgattcaccaaatgggttgtctagttatattgagagaaggattggccgtatgaaggtccttattgttcttgatgacgttaaggaagaag |
4025136 |
T |
|
| Q |
412 |
gtcagctagagatgttatttggaactcttgattggtttcgatctgatagtagaataattttaacaactagagataagcaagtacttattgctaatgaagt |
511 |
Q |
| |
|
||||| ||||||||||||||||||| ||||||||| ||| |||||||||||| |||||| | ||||||||||| | ||||||||||||| ||||||||| |
|
|
| T |
4025135 |
gtcagatagagatgttatttggaacacttgattggcttctatctgatagtaggataattgtcacaactagagacatgcaagtacttatttgtaatgaagt |
4025036 |
T |
|
| Q |
512 |
tgaagatgatgatctatatcaggttggggtattggactctagtgaagcacttgagcttttcaatttgaatgcctttaaacaaagtcatcttgaaatggag |
611 |
Q |
| |
|
|||| || ||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||| || | |
|
|
| T |
4025035 |
------tgatcatgtatatgaggttggggtattggattctagtgaagcacttgagcttttcaacttgaatgcatttaaacaacgtcatcttgaaacggtg |
4024942 |
T |
|
| Q |
612 |
tactatgatctatcaaagaaggtggtcgattatgccaaaggaattccattagttcttgaagttttggctcatctacttcgtggaaaagaca--------- |
702 |
Q |
| |
|
|||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||| | | |
|
|
| T |
4024941 |
tactttgagctatcaaagaaggtgatcgattatgccaaaggaattccattagttcttaaagttttggctcatatgcttcgtggaaaaaataaagaagtat |
4024842 |
T |
|
| Q |
703 |
-ggaaagtcagctggacaaacttgaaagactgccaaataaaaaatttcaagatgtaatgaggctcagttatgatgatcttgatcgtttagagcaaaagta |
801 |
Q |
| |
|
|||||||||||| ||||||||| ||||||||||| | ||||| |||| ||||||||||| || ||||||||||||||||||||||||||| ||||||| |
|
|
| T |
4024841 |
gggaaagtcagctagacaaacttaaaagactgccagttcaaaaagttcatgatgtaatgagactaagttatgatgatcttgatcgtttagagaaaaagta |
4024742 |
T |
|
| Q |
802 |
ttttttagatattgcatgtttcttcaaagggttgaggttgaaagtggattacatgaaacttttactgaaagattttgaaagtgataatgcagtggctatt |
901 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||| |||||| |||||| |||||||| || |
|
|
| T |
4024741 |
ttttttagatattgcatgtttcttcaacgggttgaatttgaaagtggattacatgaaacttttattgaaagattgtgaaagcgataattcagtggctgtt |
4024642 |
T |
|
| Q |
902 |
gggttagaaaggttaaaagataaatctcttataactatttctgaagataatgttatatctatgcatgacattctacaagaaatgggtcgggaggttgttc |
1001 |
Q |
| |
|
|| ||||||||||| | ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4024641 |
ggtttagaaaggttgagagataaagctcttataactatttctgaagataatattatatctatgcatgacattctacaagaaatgggtcgggaggttgttc |
4024542 |
T |
|
| Q |
1002 |
gtcaagaatctagtgaagaccctagaaaatgcagtcgattatgggatcctgatattatctatgatgtattgaaaaacgacaaggtataatatatttggcg |
1101 |
Q |
| |
|
| ||||||||||||| ||||||||||||| |||||||||||||||||| |||| || | |||||||||| |||| ||||||||| || ||| | | |
|
|
| T |
4024541 |
gccaagaatctagtgcagaccctagaaaacgcagtcgattatgggatcatgatgacatttgtgatgtattggaaaatgacaaggta-aacataatacgta |
4024443 |
T |
|
| Q |
1102 |
attttagataacatttgtaattttggtaaaaaat-------------attttga--ttttcttttacatcaatggcagggcactgatgctattagaagca |
1186 |
Q |
| |
|
||||||| || ||||| ||||||| |||||| ||||| | |||||| |||||| ||| ||||| ||||||| ||||||||||| |
|
|
| T |
4024442 |
tttttagacgacgtttgtcattttggctaaaaatacggctttaactaattttaaatttttctcttacattcatg-cagggtactgatgttattagaagca |
4024344 |
T |
|
| Q |
1187 |
tacgtgtagacttgtcagcaatcaggaagctgaagttaagccctcatgtatttgctaagatgaccaacctgcaatttttggattttc |
1273 |
Q |
| |
|
|| ||||||||||||||| || || ||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4024343 |
taagtgtagacttgtcaggaagaagaaagctgatgttaagctctcatgcatttgctaagatgaccaacctgcaatttttggattttc |
4024257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 614; E-Value: 0
Query Start/End: Original strand, 396 - 1273
Target Start/End: Original strand, 3955693 - 3956574
Alignment:
| Q |
396 |
gatgttaaggaagaaagtcagctagagatgttatttggaactcttgattggtttcgatctgatagtagaataattttaacaactagagataagcaagtac |
495 |
Q |
| |
|
|||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||| |
|
|
| T |
3955693 |
gatgttaaggaagaaaatcaactagagattttatttggaactcttgattggtttcgatctgatagtagaataattgtaacaattagagacaagcaagtac |
3955792 |
T |
|
| Q |
496 |
ttattgctaatgaagttgaagatgatgatctatatcaggttggggtattggactctagtgaagcacttgagcttttcaatttgaatgcctttaaacaaag |
595 |
Q |
| |
|
||||| ||||||||||||| |||| ||||| | ||||||||| || | | ||| ||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
3955793 |
ttattactaatgaagttga------tgatatatatgaagttggggtactgaattatagcgaagcacttgagcttttcaatttgaatgcctttaatcaaag |
3955886 |
T |
|
| Q |
596 |
tcatcttgaaatggagtactatgatctatcaaagaaggtggtcgattatgccaaaggaattccattagttcttgaagttttggctcatctacttcgtgga |
695 |
Q |
| |
|
|||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |
|
|
| T |
3955887 |
tcatcttgaaatggagtactatgagctttcaaagaaggtgatcgattatgccaaaggaattccattagttcttaaagttttggctcatctgcttcgtgga |
3955986 |
T |
|
| Q |
696 |
aaagaca----------ggaaagtcagctggacaaacttgaaagactgccaaataaaaaatttcaagatgtaatgaggctcagttatgatgatcttgatc |
785 |
Q |
| |
|
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3955987 |
aaagacaaggaagaatgggaaagtcagctggacaaacttaaaagactgccaaataaaaaatttcaagatgtaatgaggctcagttatgatgatcttgatc |
3956086 |
T |
|
| Q |
786 |
gtttagagcaaaagtattttttagatattgcatgtttcttcaaagggttgaggttgaaagtggattacatgaaacttttactgaaagattttgaaagtga |
885 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
3956087 |
gtttagagcaaaagtattttttagatattgcatgtttcttcaacgggttgaggttgaaagtggattacatgaaacttttattgaaagattttgaaagtga |
3956186 |
T |
|
| Q |
886 |
taatgcagtggctattgggttagaaaggttaaaagataaatctcttataactatttctgaagataatgttatatctatgcatgacattctacaagaaatg |
985 |
Q |
| |
|
||||||||||||| |||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
3956187 |
taatgcagtggctgttggtttagaaaggttgaaagataaatctcttataacaatttctgaagataatgttatatccatgcatgacattctacaagaaatg |
3956286 |
T |
|
| Q |
986 |
ggtcgggaggttgttcgtcaagaatctagtgaagaccctagaaaatgcagtcgattatgggatcctgatattatctatgatgtattgaaaaacgacaagg |
1085 |
Q |
| |
|
||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
3956287 |
ggtcgggaggttgttcgccaagaatccagtgaagaccctagaaaatgcagtcgattatccaatcctgatattatctatgatgtattgaaaaatgacaagg |
3956386 |
T |
|
| Q |
1086 |
tataatatatttggcgattttagataacatttgtaattttggtaaaaaatattttgattttcttttacatcaatggcagggcactgatgctattagaagc |
1185 |
Q |
| |
|
|| || ||||||||| |||||||||||||||||| || |||| |||||||||||||||||||||||||| |||| ||||| |||||||||||||||||| |
|
|
| T |
3956387 |
taaaaaatatttggcaattttagataacatttgtctttctggtgaaaaatattttgattttcttttacattaatgacagggtactgatgctattagaagc |
3956486 |
T |
|
| Q |
1186 |
atacgtgtagacttgtcagcaatcaggaagctgaagttaagccctcatgtatttgctaagatgaccaacctgcaatttttggattttc |
1273 |
Q |
| |
|
||| || ||||||||||||||| ||||| |||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||| |
|
|
| T |
3956487 |
ataagtctagacttgtcagcaagtaggaaactgaagttaagccccaatgtatttgataagatgaccaacctgcagtttttggattttc |
3956574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 587; E-Value: 0
Query Start/End: Original strand, 12 - 1271
Target Start/End: Complemental strand, 4002608 - 4001320
Alignment:
| Q |
12 |
atcatcaatctagtgttgaagaggttgagtaagcacccagttaactcaaaaggacttgttggaattgacaaatcaattgcacatttgaattcattgttac |
111 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| |||| ||||||||||| ||||||||| |||| || |||||||||| | |||||||||| |
|
|
| T |
4002608 |
atcatcaatcttgtgttgaagaggttgagtaagcaccctattaatacaaaaggacttattggaattggcaaaccagttgcacatttagaatcattgttac |
4002509 |
T |
|
| Q |
112 |
aaaaagagtcagaaaaggtccgtgtcattggaatttggggcatgggaggtattggcaagacaactattgcaggagaaatttttaactaaaattgctctga |
211 |
Q |
| |
|
|| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||| |||||||| || ||||||||| |
|
|
| T |
4002508 |
gtcaacagttagaaaaggtccgtgtcattggaatttggggtatgggaggtattggcaagacaactattgctgaagaagtttttaaccgaagttgctctga |
4002409 |
T |
|
| Q |
212 |
atatgaaggttgttgttttttggaaaaggtaagcgagcaattaggaagacatggaataacatttttgaaagaaaaacttttttctacactattagcagaa |
311 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| || ||| |||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
4002408 |
atatgaaggtttttgttttttggaaaaggtaagtgaagaatcaggaaggcatggaataacatttttaaaagaaaagcttttttctacactattagcagaa |
4002309 |
T |
|
| Q |
312 |
gatgtgaaaatccgttcgccaaatgggttgtctaattatactgtgagaaggattggtcgtatgaaggttcttattgttcttgatgatgttaaggaagaaa |
411 |
Q |
| |
|
||||||||||| ||| ||||||||| |||||||||||| | ||| | |||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4002308 |
gatgtgaaaattaattcaccaaatgggctgtctaattatattcagaggatgattggccgtatgaaggttcttattgttcttgatgatgttaaggaagaag |
4002209 |
T |
|
| Q |
412 |
gtcagctagagatgttatttggaactcttgattggtttcgatctgatagtagaataattttaacaactagagataagcaagtacttattgctaatgaagt |
511 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||| |||||||| ||||||||||||||| |||||||||| |
|
|
| T |
4002208 |
gtcaaatagagatgttatttggaactcttgattggtttcgatccgatagtaggataattgtaacgactagagacaagcaagtacttattactaatgaagt |
4002109 |
T |
|
| Q |
512 |
tgaagatgatgatctatatcaggttggggtattggactctagtgaagcacttgagcttttcaatttgaatgcctttaaacaaagtcatcttgaaatggag |
611 |
Q |
| |
|
||| |||| ||||| | |||||||| ||| | ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4002108 |
tga-----ttgatatatatgaagttggggtgttgaaacctagtgaggcacttgagctttttcatttgaatgcctttaaacaaagtcatcttgaaatggag |
4002014 |
T |
|
| Q |
612 |
tactatgatctatcaaagaaggtggtcgattatgccaaaggaattccattagttcttgaagttttggctcatctacttcgtggaaaag----------ac |
701 |
Q |
| |
|
|||||||| |||||||||| |||||| | ||||| |||||||||||||||| | || |||||||||||||| ||||||||||||||| | |
|
|
| T |
4002013 |
tactatgagctatcaaagagggtggttgcgtatgcaaaaggaattccattaggtgttaaagttttggctcatttacttcgtggaaaagttaaggaagtat |
4001914 |
T |
|
| Q |
702 |
aggaaagtcagctggacaaacttgaaagactgccaaataaaaaatttcaagatgtaatgaggctcagttatgatgatcttgatcgtttagagcaaaagta |
801 |
Q |
| |
|
|||||||||||| || |||||| ||| ||| |||| ||||||| || | ||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4001913 |
gggaaagtcagcttgataaacttaaaaaacttccaagtaaaaaagtttatgatgtaatgagactcagttatgatgatcttgatcgtttagagcaaaagta |
4001814 |
T |
|
| Q |
802 |
ttttttagatattgcatgtttcttcaaagggttgaggttgaaagtggattacatgaaacttttactgaaagattttgaaagtgataatgcagtggctatt |
901 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| | || | |||| ||||||||| ||| |||||| | || |
|
|
| T |
4001813 |
ttttttagatattgcatgtttcttcaacgggttgaatttgaaagtggattacatgaaacatctatt--aagagactgaaagtgacaattcagtggttgtt |
4001716 |
T |
|
| Q |
902 |
gggttagaaaggttaaaagataaatctcttataactatttctgaagataatgttatatctatgcatgacattctacaagaaatgggtcgggaggttgttc |
1001 |
Q |
| |
|
|| ||||||||||| ||||||||| |||||||||||||||| || |||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
4001715 |
ggtttagaaaggttgaaagataaagctcttataactatttcgaaatataatgttgtatctatgcatgacattttacaagaaatgggtcgggaggttgttc |
4001616 |
T |
|
| Q |
1002 |
gtcaagaatctagtgaagaccctagaaaatgcagtcgattatgggatcctgatattatctatgatgtattgaaaaacgacaaggtataatatat-ttggc |
1100 |
Q |
| |
|
| ||||||||||||||||||||||| ||| | ||||| ||||||||||||||| || | ||||||||||||| ||||||||| || |||| |||| |
|
|
| T |
4001615 |
gccaagaatctagtgaagaccctagtaaacgaagtcggttatgggatcctgatgacatttgctatgtattgaaaaatgacaaggtaaaaaatataatggc |
4001516 |
T |
|
| Q |
1101 |
gattttaga----------taacatttgtaattttggtaaaaaatat------------tttg--atttt-cttttacatcaatggcagggcactgatgc |
1175 |
Q |
| |
|
| ||||||| ||||| ||| |||||||| |||||||| |||| ||||| ||||||||| ||||| |||| |||||||| |
|
|
| T |
4001515 |
gtttttagaaactttttagaaacatatgtcattttggttaaaaatatggctttcaatgatttgtaatttttcttttacattaatggtagggtactgatgc |
4001416 |
T |
|
| Q |
1176 |
tattagaagcatacgtgtagacttgtcagcaatcaggaagctgaagttaagccctcatgtatttgctaagatgaccaacctgcaatttttggattt |
1271 |
Q |
| |
|
|||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
4001415 |
tattagaagcatacgtgtagacttgtcatcatttaggaagctgaagttaagccctcatgtatttgctaagatgaccaacctgcgatatttggattt |
4001320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 577; E-Value: 0
Query Start/End: Original strand, 26 - 1272
Target Start/End: Complemental strand, 3987290 - 3986022
Alignment:
| Q |
26 |
gttgaagaggttgagtaagcacccagttaactcaaaaggacttgttggaattgacaaatcaattgcacatttgaattcattgttacaaaaagagtcagaa |
125 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| | ||||||||| || |
|
|
| T |
3987290 |
gttgaagatgttgagtaagcacccagttaactcaaaaggacttattggaattgacaaatcaattgcacatttaaattcattgttaaagaaagagtcacaa |
3987191 |
T |
|
| Q |
126 |
aaggtccgtgtcattggaatttggggcatgggaggtattggcaagacaactattgcaggagaaatttttaactaaaattgctctgaatatgaaggttgtt |
225 |
Q |
| |
|
||||||||||| |||||||||||||| ||| || |||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||| ||||||| |
|
|
| T |
3987190 |
aaggtccgtgtgattggaatttggggtatgcctggcattggcaagacaactattgcagaagaaatttttaaccaaaatcgctctgaatatgatggttgtt |
3987091 |
T |
|
| Q |
226 |
gttttttggaaaaggtaagcgagcaattaggaagacatggaataacatttttgaaagaaaaacttttttctacactattagcagaagatgtgaaaatccg |
325 |
Q |
| |
|
||||||||| |||||| || || | ||| | |||||||||| || ||| ||||||| |||||| ||| | |||| || |||||||||||||| |
|
|
| T |
3987090 |
gttttttggcaaaggtgagtgaaaagttaaaattacatggaatagaatctttaaaagaaaccctttttactaaaatattggccgaagatgtgaaaattga |
3986991 |
T |
|
| Q |
326 |
ttcgccaaatgggttgtctaattatactgtgagaaggattggtcgtatgaaggttcttattgttcttgatgatgttaaggaagaaagtcagctagagatg |
425 |
Q |
| |
|
| | |||||| ||||||| | | ||| || |||| | ||||| || |||||||||||||| ||||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
3986990 |
tacaccaaataggttgtccagtgatattgagagacgaattggacgcatgaaggttcttatcattcttgatgatgttaaggacgaagatcagctagagatg |
3986891 |
T |
|
| Q |
426 |
ttatttggaactcttgattggtttcgatctgatagtagaataattttaacaactagagataagcaagtacttattgctaatgaagttgaagatgatgatc |
525 |
Q |
| |
|
||||| | ||||||||| ||||||| ||| ||||||||||||||| ||||| | |||||||||||||||||| ||| |||||||||||| |||||||||| |
|
|
| T |
3986890 |
ttattcgaaactcttgactggtttcaatcagatagtagaataattctaacagccagagataagcaagtactttttgataatgaagttgacgatgatgatc |
3986791 |
T |
|
| Q |
526 |
tatatcaggttggggtattggactctagtgaagcacttgagcttttcaatttgaatgcctttaaacaaagtcatcttgaaatggagtactatgatctatc |
625 |
Q |
| |
|
|||| |||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
3986790 |
gatatgaggttggggtattggattctagtgatgcacttgcacttttcaatttgaatgcctttaaacaaagtcatcttgaaactgagtttgatgaaatatc |
3986691 |
T |
|
| Q |
626 |
aaagaaggtggtcgattatgccaaaggaattccattagttcttgaagttttggctcatctacttcgtggaaaagaca----------ggaaagtcagctg |
715 |
Q |
| |
|
||||| ||||||| ||||||||||||||| ||||||||||||| |||||||||||||| | |||||||||||| ||| |||||||||||| |
|
|
| T |
3986690 |
aaagagggtggtcaattatgccaaaggaaatccattagttcttaaagttttggctcatatgcttcgtggaaaaaacaaagaagtatgggaaagtcagcta |
3986591 |
T |
|
| Q |
716 |
gacaaacttgaaagactgccaaataaaaaatttcaagatgtaatgaggctcagttatgatgatcttgatcgtttagagcaaaagtattttttagatattg |
815 |
Q |
| |
|
||||||||| ||||||||||| ||||||| |||| |||||| ||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
3986590 |
gacaaacttaaaagactgccagttaaaaaagttcatgatgtagtgaaactcagttacgatgatcttgatcgtttagagaaaaagtattttttagatattg |
3986491 |
T |
|
| Q |
816 |
catgtttcttcaaagggttgaggttgaaagtggattacatgaaacttttactgaaagattttgaaagtgataatgcagtggctattgggttagaaaggtt |
915 |
Q |
| |
|
||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||| |||| |||||||| |||||||| ||||| |||||||||| |
|
|
| T |
3986490 |
catgtttcttcaatgggttgagtttgaaagtggattacatgaaacttttattgaaagattgtgaaggtgataattcagtggctgttgggatagaaaggtt |
3986391 |
T |
|
| Q |
916 |
aaaagataaatctcttataactatttctgaagataatgttatatctatgcatgacattctacaagaaatgggtcgggaggttgttcgtcaagaatctagt |
1015 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
3986390 |
gaaagataaagctctcataactatttctgaagataatgttatatctatgcatgacattcttcaagaaatgggtcgggaggttgttcgccaagaatctagt |
3986291 |
T |
|
| Q |
1016 |
gaagaccctagaaaatgcagtcgattatgggatcctgatattatctatgatgtattgaaaaacgacaaggtataatatatttggcgattttagataacat |
1115 |
Q |
| |
|
||| |||| | ||| |||||||||||||||||| |||| || | ||||| || ||||| |||||||||||| ||| | || |||| ||||||| |
|
|
| T |
3986290 |
gaatacccaaacaaacgcagtcgattatgggatcatgatgaaatttgcgatgtcttaaaaaatgacaaggtataaaata--tagcatctttacataacat |
3986193 |
T |
|
| Q |
1116 |
ttgtaattttggtaaaaaat-------------attttg-attttcttttacatcaatggcagggcactgatgctattagaagcatacgtgtagacttgt |
1201 |
Q |
| |
|
|||| |||||||| ||||| |||| | |||||||||| ||| ||| ||||| ||||||||||||||||||||| || || |||||| |
|
|
| T |
3986192 |
ttgttattttggtttaaaatgtgtctttcaatgatttagaattttcttttccattcatgacagggtactgatgctattagaagcatatgtctaaacttgt |
3986093 |
T |
|
| Q |
1202 |
cagcaatcaggaagctgaagttaagccctcatgtatttgctaagatgaccaacctgcaatttttggatttt |
1272 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||| |
|
|
| T |
3986092 |
cagcaattaggaagctgaagttaagccctgatgtatttgctaagatgacgaacctgaaatttttggatttt |
3986022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 476; E-Value: 0
Query Start/End: Original strand, 372 - 1272
Target Start/End: Original strand, 3919919 - 3920833
Alignment:
| Q |
372 |
atgaaggttcttattgttcttgatgatgttaaggaagaaag-tcagctagagatgttatttggaactcttgattggtttcgatctgatagtagaataatt |
470 |
Q |
| |
|
|||||||||||||| |||||||||||||| ||||| || || |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
3919919 |
atgaaggttcttatcgttcttgatgatgtcaagga-gacagatcagctcgagatgttatttggaactcttgattggtttcaatctgatagtagaataatt |
3920017 |
T |
|
| Q |
471 |
ttaacaactagagataagcaagtacttattgctaatgaagttgaagatgatgatctatatcaggttggggtattggactctagtgaagcacttgagcttt |
570 |
Q |
| |
|
||||| | ||||||||||||||||| | ||||||||||||| |||||| ||||||| ||||| |||||||||| |||||||||||||||||||||| |
|
|
| T |
3920018 |
ctaacatccagagataagcaagtactaaggactaatgaagttgatcatgatggtctatatgaggttagggtattggattctagtgaagcacttgagcttt |
3920117 |
T |
|
| Q |
571 |
tcaatttgaatgcctttaaacaaagtcatcttgaaatggagtactatgatctatcaaagaaggtggtcgattatgccaaaggaattccattagttcttga |
670 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||| |||| |||||||||||| |||||||||||||| | |
|
|
| T |
3920118 |
tcaatttgaatgcctttaaacaaagtcatcctgaaatggagtactatgagctatcaaagagggtgatcgaatatgccaaaggagttccattagttcttaa |
3920217 |
T |
|
| Q |
671 |
agttttggctcatctacttcgtggaaaagaca----------ggaaagtcagctggacaaacttgaaagactgccaaataaaaaatttcaagatgtaatg |
760 |
Q |
| |
|
||||||||||||| | |||||||||||| ||| |||||||||||| ||||||||| ||||||||||| | ||||| |||| |||||| || |
|
|
| T |
3920218 |
agttttggctcatatgcttcgtggaaaaaacaaagaagtatgggaaagtcagctagacaaacttaaaagactgccagttcaaaaagttcatgatgtagtg |
3920317 |
T |
|
| Q |
761 |
aggctcagttatgatgatcttgatcgtttagagcaaaagtattttttagatattgcatgtttcttcaaagggttgaggttgaaagtggattacatgaaac |
860 |
Q |
| |
|
| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
3920318 |
aaactcagttatgatgatcttgatcgtttagagaaaaagtattttttagatattgcatgtttcttcaatgggttgaatttgaaagtggattacatgaaac |
3920417 |
T |
|
| Q |
861 |
ttttactgaaagattttgaaagtgataatgcagtggctattgggttagaaaggttaaaagataaatctcttataactatttctgaagataatgttatatc |
960 |
Q |
| |
|
|||| ||||||||| ||| ||||||||| |||||| |||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
3920418 |
atttattgaaagattgtgatagtgataattacgtggctggtgggttagaaagcttgaaagataaagctcttataactatttctgaagataatgttatatc |
3920517 |
T |
|
| Q |
961 |
tatgcatgacattctacaagaaatgggtcgggaggttgttcgtcaagaatctagtgaagaccctagaaaatgcagtcgattatgggatcctgatattatc |
1060 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||| ||||| |||| ||||||||||||||||| |||| || |
|
|
| T |
3920518 |
tatgcatgacattctacaagaaatgggtcgggaggtagttcgccaagaatctagagaacaccctgaaaaacgcagtcgattatgggatgttgatgacatt |
3920617 |
T |
|
| Q |
1061 |
tatgatgtattgaaaaacgacaaggtataatatatttggcgattttagataacatttgtaattttggtaaaaa----atattttgattttcttttacatc |
1156 |
Q |
| |
|
| ||||||||||||||| ||||||||| | ||| |||| ||| |||||||| | || ||||||||||||| |||||||||||||||||||||| |
|
|
| T |
3920618 |
tgtgatgtattgaaaaatgacaaggtaaacattatatggcattttcagataacaatagtcattttggtaaaaagtatatattttgattttcttttacatt |
3920717 |
T |
|
| Q |
1157 |
aatggcagggcactgatgctattagaagcatacgtgtagacttgtcagcaatcaggaagctgaagttaagccctcatgtatttgctaagatgaccaacct |
1256 |
Q |
| |
|
|||||||||| |||||||||| ||||||||||||||| |||| | || || |||||||| |||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
3920718 |
aatggcagggttctgatgctatcagaagcatacgtgtaaacttcttagaaaataggaagctaaagttaagccctcatgtatttgataagatgaccaacct |
3920817 |
T |
|
| Q |
1257 |
gcaatttttggatttt |
1272 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
3920818 |
ccaatttttggatttt |
3920833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 445; E-Value: 0
Query Start/End: Original strand, 372 - 1272
Target Start/End: Original strand, 3933143 - 3934054
Alignment:
| Q |
372 |
atgaaggttcttattgttcttgatgatgttaaggaagaaagtcagctagagatgttatttggaactcttgattggtttcgatctgatagtagaataattt |
471 |
Q |
| |
|
||||| ||||||||||||||||||||||| || ||| | || ||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
3933143 |
atgaaagttcttattgttcttgatgatgtcaatgaaacagatctgctagagatgttatttggatctcttgattggtttcgattagatagtagaataattg |
3933242 |
T |
|
| Q |
472 |
taacaactagagataagcaagtacttattgctaatgaagttgaagatgatgatctatatcaggttggggtattggactctagtgaagcacttgagctttt |
571 |
Q |
| |
|
|||| | |||| |||||||||| ||| || | ||||||||||| |||||||||||| | ||||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
3933243 |
taaccagtagaaataagcaagtgcttgttaccaatgaagttgataatgatgatctatgtgaggttagggtattggattctagtgaagcacttgagctttt |
3933342 |
T |
|
| Q |
572 |
caatttgaatgcctttaaacaaagtcatcttgaaatggagtactatgatctatcaaagaaggtggtcgattatgccaaaggaattccattagttcttgaa |
671 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||| |||| |||||||||||| |||||||||||||| || |
|
|
| T |
3933343 |
caatttgaatgcctttaaacaaagtcatcttgaaatggagtactatgagctatcagagagggtgatcgaatatgccaaaggagttccattagttcttaaa |
3933442 |
T |
|
| Q |
672 |
gttttggctcatctacttcgtggaaaagaca----------ggaaagtcagctggacaaacttgaaagactgccaaataaaaaatttcaagatgtaatga |
761 |
Q |
| |
|
|||||||||||| | |||||||||||| | ||||||| |||| ||||||||| |||||||||||| | |||| |||| |||||||||| |
|
|
| T |
3933443 |
gttttggctcatatgcttcgtggaaaatgtaaagaagtatgggaaagtaagctagacaaacttaaaagactgccaattccaaaagttcatgatgtaatga |
3933542 |
T |
|
| Q |
762 |
ggctcagttatgatgatcttgatcgtttagagcaaaagtattttttagatattgcatgtttcttcaaagggttgaggttgaaagtggattacatgaaact |
861 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| || ||||||||||||||| |
|
|
| T |
3933543 |
ggcttagttatgatgatcttgatcgtttagagcaaaagtattttttagatattgcatgtttcttcaatgggttggatttggaattggattacatgaaaca |
3933642 |
T |
|
| Q |
862 |
tttactgaaagattttgaaagtgataatgcagtggctattgggttagaaaggttaaaagataaatctcttataactatttctgaagataatgttatatct |
961 |
Q |
| |
|
|||| ||||||||| ||| ||||||||| |||||| ||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
3933643 |
tttattgaaagattgtgatagtgataattacgtggctggtgggttagaaacgttgaaagataaagctcttataactatttctgaagataatgttatatct |
3933742 |
T |
|
| Q |
962 |
atgcatgacattctacaagaaatgggtcgggaggttgttcgtcaagaatctagtgaagaccctagaaaatgcagtcgattatgggatcctgatattatct |
1061 |
Q |
| |
|
|||||||||||||| |||||||||||| ||||||||||||| |||||||||||| |||| | ||||||||||||||||||||||| |||| || | |
|
|
| T |
3933743 |
atgcatgacattcttcaagaaatgggttgggaggttgttcggcaagaatctagt---gaccttggaaaatgcagtcgattatgggatgttgatgacattt |
3933839 |
T |
|
| Q |
1062 |
atgatgtattgaaaaacgacaaggtataatatatttggcgattttagataacatttgtaattttggtaaaaa----atattttgattttcttttacatca |
1157 |
Q |
| |
|
||||||||||||||| ||||||||| | ||| |||| ||| |||||||| | || ||||||||||||| |||||||||||||||||||||| | |
|
|
| T |
3933840 |
ttgatgtattgaaaaatgacaaggtaaacattatatggcattttcagataacaatagtcattttggtaaaaagtatatattttgattttcttttacatta |
3933939 |
T |
|
| Q |
1158 |
atggcagggcactgatgctattagaagcatacgtgtagacttgtcagcaatcaggaagctgaagttaagccctcatgtatttgctaagatgaccaacctg |
1257 |
Q |
| |
|
||||||||| |||||||||| |||||||||||||||||||| | || || |||||||| |||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
3933940 |
atggcagggttctgatgctatcagaagcatacgtgtagacttcttagaaaataggaagctaaagttaagccctcatgtatttgataagatgaccaacctc |
3934039 |
T |
|
| Q |
1258 |
caatttttggatttt |
1272 |
Q |
| |
|
||||||||| ||||| |
|
|
| T |
3934040 |
caatttttgaatttt |
3934054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 404; E-Value: 0
Query Start/End: Original strand, 48 - 1087
Target Start/End: Complemental strand, 3810289 - 3809237
Alignment:
| Q |
48 |
ccagttaactcaaaaggacttgttggaattgacaaatcaattgcacatttgaattcattgttacaaaaagagtcagaaaaggtccgtgtcattggaattt |
147 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||||||| ||| |||||||||| ||||||||| | ||||||||| |||||| || ||| || ||||||| |
|
|
| T |
3810289 |
ccagttaaatcaaaagaacttgttggaattgacaaatctatttcacatttgaaatcattgttaaagaaagagtcacaaaaggcccctgttatcggaattt |
3810190 |
T |
|
| Q |
148 |
ggggcatgggaggtattggcaagacaactattgcaggagaaatttttaactaaaattgctctgaatatgaaggttgttgttttttggaaaaggtaagcga |
247 |
Q |
| |
|
|||| ||||| |||||||||||||||||||||||| |||| | ||| || ||| ||| ||||||||||| ||||||||||| |||||||||||||| || |
|
|
| T |
3810189 |
ggggtatgggtggtattggcaagacaactattgcaaaagaattatttgaccaaatttgttctgaatatgatggttgttgtttcttggaaaaggtaagtga |
3810090 |
T |
|
| Q |
248 |
gcaattaggaagacatggaataacatttttgaaagaaaaacttttttctacactattagcagaagatgtgaaaatccgttcgccaaatgggttgtctaat |
347 |
Q |
| |
|
| ||| |||||||||||| | ||| ||| | ||||||||||||| |||||| ||||||||||||||||| | | |||||| ||||| ||| | |
|
|
| T |
3810089 |
agagttaacaagacatggaatggattctttaaaaaataaacttttttctaaactattggcagaagatgtgaaaattgatacaccaaattggttgcctagt |
3809990 |
T |
|
| Q |
348 |
tatactgtgagaaggattggtcgtatgaaggttcttattgttcttgatgatgttaaggaagaaagtcagctagagatgttatttggaactcttgattggt |
447 |
Q |
| |
|
||| || ||| ||||||| || |||||||||||||| ||||||||||| || |||| | |||||| || | |||||||||| | |||||||| |
|
|
| T |
3809989 |
gatattgagaggcggattggccgcatgaaggttcttatcgttcttgatgacgtcaagggtacagatcagctggaaaaattatttggaagttgtgattggt |
3809890 |
T |
|
| Q |
448 |
ttcgatctgatagtagaataattttaacaactagagataagcaagtacttattgctaatgaagttgaagatgatgatctatatcaggttggggtattgga |
547 |
Q |
| |
|
||| || |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| | |||||||| | | ||||||||||||||| |
|
|
| T |
3809889 |
ttcaatatgatagtagaataattttaacagccagagataagcaagtacttattgctaatgaagttgataaagatgatctgtttgaggttggggtattggg |
3809790 |
T |
|
| Q |
548 |
ctctagtgaagcacttgagcttttcaatttgaatgcctttaaacaaagtcatcttgaaatgga---gtactatgatctatcaaagaaggtggtcgattat |
644 |
Q |
| |
|
||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||| | || || | |||| ||||||||| |||| ||| ||| |
|
|
| T |
3809789 |
tcctactgaagaacttgagcttttcaatttgaatgcctttaaacaaagtgatcttgaagttgatcagttttgtgatgtatcaaagagggtgaccgaatat |
3809690 |
T |
|
| Q |
645 |
gccaaaggaattccattagttcttgaagttttggctcatctacttcgtggaaaagaca----------ggaaagtcagctggacaaacttgaaagactgc |
734 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||| || | |||||||||||| | | |||||||||||| ||||||||| |||||||| |
|
|
| T |
3809689 |
gccaaaggaattccattagttcttaaagttttggctaatatgcttcgtggaaaaaataaagaagtatgggaaagtcagctagacaaacttagaagactgc |
3809590 |
T |
|
| Q |
735 |
caaataaaaaatttcaagatgtaatgaggctcagttatgatgatcttgatcgtttagagcaaaagtattttttagatattgcatgtttcttcaaagggtt |
834 |
Q |
| |
|
|| | || || || | | |||||||| |||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
3809589 |
cagttcaagaagttgataaagtaatgagactcagttatgatgatcttgatcctttagagaagaagtattttttagatattgcatgtttcttcaatgggtt |
3809490 |
T |
|
| Q |
835 |
gaggttgaaagtggattacatgaaacttttactgaaagattttgaaagtgataatgcagtggctattgggttagaaaggttaaaagataaatctcttata |
934 |
Q |
| |
|
||| |||| ||||| |||||| | ||||||| ||||||||| | | ||||||||| |||||||| |||||||||||| || ||||| ||| |||||||| |
|
|
| T |
3809489 |
gagtttgagagtgggttacataacacttttattgaaagattctaacagtgataattcagtggctgctgggttagaaagcttgaaagacaaagctcttata |
3809390 |
T |
|
| Q |
935 |
actatttctgaagataatgttatatctatgcatgacattctacaagaaatgggtcgggaggttgttcgtcaagaatctagtgaagaccctagaaaatgca |
1034 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||| ||||| |||| ||| |
|
|
| T |
3809389 |
actatttctgaatataatgttatatctatgcatgacattctacaagaaatgggtcgggaggtagttcgccaagaatctagagaacaccctgaaaaacgca |
3809290 |
T |
|
| Q |
1035 |
gtcgattatgggatcctgatattatctatgatgtattgaaaaacgacaaggta |
1087 |
Q |
| |
|
||||||||||| |||||||| || ||||||||||||||||| ||||||||| |
|
|
| T |
3809289 |
gtcgattatggaatcctgatgaaatttatgatgtattgaaaaatgacaaggta |
3809237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 372 - 1087
Target Start/End: Complemental strand, 3817545 - 3816823
Alignment:
| Q |
372 |
atgaaggttcttattgttcttgatgatgttaaggaagaaag-tcagctagagatgttatttggaactcttgattggtttcgatctgatagtagaataatt |
470 |
Q |
| |
|
|||||||||||||| |||||||||||||| ||||| || || |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
3817545 |
atgaaggttcttatcgttcttgatgatgtcaagga-gacagatcagctcgagatgttatttggaactcttgattggtttcaatctgatagtagaataatt |
3817447 |
T |
|
| Q |
471 |
ttaacaactagagataagcaagtacttattgctaatgaagttgaagatgatgatctatatcaggttggggtattggactctagtgaagcacttgagcttt |
570 |
Q |
| |
|
||||| | ||||||||||||||||| | |||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||| ||||| |
|
|
| T |
3817446 |
ctaacatccagagataagcaagtactaaggaataatgaagttgaagatgatgatatatatgaggttggggtattggattctagtgaagcacttgtgcttt |
3817347 |
T |
|
| Q |
571 |
tcaatttgaatgcctttaaacaaagtcatcttgaaatggagtactatgatctatcaaagaaggtggtcgattatgccaaaggaattccattagttcttga |
670 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||| ||||| ||||||||| | |
|
|
| T |
3817346 |
tcaattcgaatgcctttaaacaaagtcatcttgaaatggagtactatgagctatcaaagagtgtggtcaattatgccaaagggattccgttagttcttaa |
3817247 |
T |
|
| Q |
671 |
agttttggctcatctacttcgtggaaaagaca----------ggaaagtcagctggacaaacttgaaagactgccaaataaaaaatttcaagatgtaatg |
760 |
Q |
| |
|
||||| |||||| | |||||||||||| | | |||||||||||| ||||||||| |||||||||| | ||||| || | |||| |||| |
|
|
| T |
3817246 |
ggttttagctcatatgcttcgtggaaaaaagaaagaagtatgggaaagtcagctagacaaacttagaagactgccagttcaaaaagtttatgatgcaatg |
3817147 |
T |
|
| Q |
761 |
aggctcagttatgatgatcttgatcgtttagagcaaaagtattttttagatattgcatgtttcttcaaagggttgaggttgaaagtggattacatgaaac |
860 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |
|
|
| T |
3817146 |
agactcagttatgatgatcttgatcgtttagagcaaaagtattttttagatattgcatgtttcttcaatgggttggatttgaaagtggattacatgaaac |
3817047 |
T |
|
| Q |
861 |
ttttactgaaagattttgaaagtgataatgcagtggctattgggttagaaaggttaaaagataaatctcttataactatttctgaagataatgttatatc |
960 |
Q |
| |
|
|||| ||||||||| ||| ||||||||| |||||| ||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
3817046 |
atttattgaaagattgtgatagtgataattacgtggctggtgggttagaaacgttgaaagataaagctcttataactatttctgaagataatgttatatc |
3816947 |
T |
|
| Q |
961 |
tatgcatgacattctacaagaaatgggtcgggaggttgttcgtcaagaatctagtgaagaccctagaaaatgcagtcgattatgggatcctgatattatc |
1060 |
Q |
| |
|
||||||||||||||| |||||||||||| ||||| ||||||| |||||||||||| |||| | ||||| |||||||||||||| |||||||| || |
|
|
| T |
3816946 |
tatgcatgacattcttcaagaaatgggttgggagattgttcggcaagaatctagt---gaccttggaaaacgcagtcgattatggaatcctgatgaaatt |
3816850 |
T |
|
| Q |
1061 |
tatgatgtattgaaaaacgacaaggta |
1087 |
Q |
| |
|
||||||||||||||||| ||||||||| |
|
|
| T |
3816849 |
tatgatgtattgaaaaatgacaaggta |
3816823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 55 - 698
Target Start/End: Complemental strand, 4218909 - 4218266
Alignment:
| Q |
55 |
actcaaaaggacttgttggaattgacaaatcaattgcacatttgaattcattgttacaaaaagagtcagaaaaggtccgtgtcattggaatttggggcat |
154 |
Q |
| |
|
|||||||||||||| ||||||| |||||| |||||||||||||||||||||||||| | |||||||| | |||||||||||| |||||||||||||| || |
|
|
| T |
4218909 |
actcaaaaggacttattggaatggacaaaccaattgcacatttgaattcattgttaaacaaagagtcgggaaaggtccgtgttattggaatttggggtat |
4218810 |
T |
|
| Q |
155 |
gggaggtattggcaagacaactattgcaggagaaatttttaactaaaattgctctgaatatgaaggttgttgttttttggaaaaggtaagcgagcaatta |
254 |
Q |
| |
|
||| |||||||||||||||||||||||| |||| | ||| || ||| ||| ||||||||||| |||||||||||| || ||| || || | |||| |
|
|
| T |
4218809 |
gggcggtattggcaagacaactattgcaaaagaattatttgaccaaatttgttctgaatatgatggttgttgttttatgtcaaatgtgagtttgggatta |
4218710 |
T |
|
| Q |
255 |
ggaagacatggaataacatttttgaaagaaaaacttttttctacactattagcagaagatgtgaaaatccgttcgccaaatgggttgtctaattatactg |
354 |
Q |
| |
|
||| | ||||||||||||||| ||||||| |||||||||| |||||| ||||||||||||||| ||| ||||||||||||||||| ||| | |
|
|
| T |
4218709 |
caaagtcgtggaataacatttttaaaagaaatgcttttttctaacctattaaatgaagatgtgaaaatcgattcatcaaatgggttgtctaataatattc |
4218610 |
T |
|
| Q |
355 |
tgagaaggattggtcgtatgaaggttcttattgttcttgatgatgttaaggaagaaagtcagctagagatgttatttggaactcttgattggtttcgatc |
454 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4218609 |
atagaaggattgaccgtatgaaggttcttattgttcttgatgatattaaggaagaaggtctgctagagatgttatttggaactcttgattggtttcgatc |
4218510 |
T |
|
| Q |
455 |
tgatagtagaataattttaacaactagagataagcaagtacttattgctaatgaagttgaagatgatgatctatatcaggttggggtattggactctagt |
554 |
Q |
| |
|
||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||| | |||||||||||| | ||||| |
|
|
| T |
4218509 |
cgatagtagaatcattgtaacatctagagataagcaagtacttattgctaatgaagttgatgatgatgatgtatatgaagttggggtattgaattctagc |
4218410 |
T |
|
| Q |
555 |
gaagcacttgagcttttcaatttgaatgcctttaaacaaagtcatcttgaaatggagtactatgatctatcaaagaaggtggtcgattatgccaaaggaa |
654 |
Q |
| |
|
|| ||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4218409 |
gatgcacttgcgcttttcaatttgaatgcctttaaagaaagtcatcttgaaattaagtactacgatctatcaaagaaggtggtcgattatgccaaaggaa |
4218310 |
T |
|
| Q |
655 |
ttccattagttcttgaagttttggctcatctacttcgtggaaaa |
698 |
Q |
| |
|
|||||||||||||| ||||||||| |||| | ||||||||||| |
|
|
| T |
4218309 |
ttccattagttcttaaagttttgggtcatatgtttcgtggaaaa |
4218266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 755 - 1054
Target Start/End: Complemental strand, 4218196 - 4217897
Alignment:
| Q |
755 |
gtaatgaggctcagttatgatgatcttgatcgtttagagcaaaagtattttttagatattgcatgtttcttcaaagggttgaggttgaaagtggattaca |
854 |
Q |
| |
|
|||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
4218196 |
gtaatgagactcagttatgatgatcttgatctcttagagcaaaagtattttttagatattgcatgtttcttcaatgggttgaatttgaaagtggattaca |
4218097 |
T |
|
| Q |
855 |
tgaaacttttactgaaagattttgaaagtgataatgcagtggctattgggttagaaaggttaaaagataaatctcttataactatttctgaagataatgt |
954 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||| ||||||| |||||||||||||||| ||||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
4218096 |
tgaaacttttattgaaagattatgaaagtgataattcagtggccgttgggttagaaaggttgaaagataaagctcttattactatttctgaagataatgt |
4217997 |
T |
|
| Q |
955 |
tatatctatgcatgacattctacaagaaatgggtcgggaggttgttcgtcaagaatctagtgaagaccctagaaaatgcagtcgattatgggatcctgat |
1054 |
Q |
| |
|
||||||||||||||| ||| |||| | |||||||||||||||||||| | |||||||| | |||||||||| ||| ||||| ||||||||||||||| |
|
|
| T |
4217996 |
aatatctatgcatgactttcaacaaaagatgggtcgggaggttgttcgcctagaatctattaaagaccctagtaaacaaagtcggttatgggatcctgat |
4217897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 157; E-Value: 8e-83
Query Start/End: Original strand, 559 - 1048
Target Start/End: Complemental strand, 4018479 - 4017980
Alignment:
| Q |
559 |
cacttgagcttttcaatttgaatgcctttaaacaaagtcatcttgaaatggagtactatgatctatcaaagaaggtggtcgattatgccaaaggaattcc |
658 |
Q |
| |
|
||||||||||||||||||||||||| || ||| | | |||||||| ||||||||||| ||| |||||| ||||||| ||||||||||||| ||||| |
|
|
| T |
4018479 |
cacttgagcttttcaatttgaatgctttcaaagttaaggaacttgaaattgagtactatgagctaacaaagagggtggtcaattatgccaaaggcattcc |
4018380 |
T |
|
| Q |
659 |
attagttcttgaagttttggctcatctacttcgtggaaaagaca----------ggaaagtcagctggacaaacttgaaagactgccaaataaaaaattt |
748 |
Q |
| |
|
|||||||||| |||||||||||||||| ||||| |||||||| | ||||||||| || ||||| ||| ||| | |||||| ||||||| || |
|
|
| T |
4018379 |
attagttcttaaagttttggctcatcttcttcgcggaaaagataagctagtatgggaaagtcaactagacaagcttaaaaaaatgccaagtaaaaaagtt |
4018280 |
T |
|
| Q |
749 |
caagatgtaatgaggctcagttatgatgatcttgatcgtttagagcaaaagtattttttagatattgcatgtttcttcaaagggttgaggttgaaagtgg |
848 |
Q |
| |
|
|||||||||| ||| | |||||||||||||| ||||| |||| ||||| ||||| |||| |||||||||| ||||| || | | |||||||||| |
|
|
| T |
4018279 |
caagatgtaacgagattgagttatgatgatctggatcgcaaagagaaaaagattttttcagatcttgcatgttttttcaatggatcaaatttgaaagtgg |
4018180 |
T |
|
| Q |
849 |
attacatgaaacttttactgaaagattttgaaagtgataatgcagtggctattgggttagaaaggttaaaagataaatctcttataactatttctgaaga |
948 |
Q |
| |
|
| ||||| ||| |||| ||||||||| ||||||||||||| |||| || | ||||||||||||||| ||||||||| ||||||| || ||||| |||| |
|
|
| T |
4018179 |
actacataaaatttttgttgaaagattctgaaagtgataattcagtagccagtgggttagaaaggttgaaagataaaggtcttatatctttttctaaaga |
4018080 |
T |
|
| Q |
949 |
taatgttatatctatgcatgacattctacaagaaatgggtcgggaggttgttcgtcaagaatctagtgaagaccctagaaaatgcagtcgattatgggat |
1048 |
Q |
| |
|
|||||||||||| |||||||||||| |||||||||||||| |||| ||||||| |||||||| | || ||||||| ||| || ||||| ||||||||| |
|
|
| T |
4018079 |
taatgttatatccatgcatgacattatacaagaaatgggtagggaaattgttcgccaagaatcaaatggagaccctggaagctgtagtcggttatgggat |
4017980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 142; E-Value: 7e-74
Query Start/End: Original strand, 559 - 1087
Target Start/End: Original strand, 3963629 - 3964164
Alignment:
| Q |
559 |
cacttgagcttttcaatttgaatgcctttaaacaaagtcatcttgaaatggagtactatgatctatcaaagaaggtggtcgattatgccaaaggaattcc |
658 |
Q |
| |
|
||||||||||||||||||||||||| || ||| | | |||||||| |||||| |||| |||||||||| |||||| ||||||||||||| ||||| |
|
|
| T |
3963629 |
cacttgagcttttcaatttgaatgctttcaaaggtaaggaacttgaaattgagtacaatgagctatcaaagagggtggtgaattatgccaaaggcattcc |
3963728 |
T |
|
| Q |
659 |
attagttcttgaagttttggctcatctacttcgtggaaaagaca----------ggaaagtcagctggacaaacttgaaagactgccaaataaaaaattt |
748 |
Q |
| |
|
|||||||||| |||||||||| ||||| | || |||||||| | ||||||||| || ||||| ||| || | |||||| ||||||| || |
|
|
| T |
3963729 |
attagttcttaaagttttggcgcatcttgtccgcggaaaagataagctagtatgggaaagtcaactagacaagcttagaaaaatgccaagtaaaaaagtt |
3963828 |
T |
|
| Q |
749 |
caagatgtaatgaggctcagttatgatgatcttgatcgtttagagcaaaagtattttttagatattgcatgtttcttcaaagggttgaggttgaaagtgg |
848 |
Q |
| |
|
|||||||||||||| | |||||||||||||| ||||| |||||||||| ||||||||||||||||||||| ||||| |||| || |||||||||| |
|
|
| T |
3963829 |
caagatgtaatgagattgagttatgatgatctagatcgcgaagagcaaaagatttttttagatattgcatgttttttcaatgggtcgaatttgaaagtgg |
3963928 |
T |
|
| Q |
849 |
attacatgaaacttttactgaaagattttgaaagtgataatgcagtggctattgggttagaaaggttaaaagataaatctcttataactatttctgaaga |
948 |
Q |
| |
|
| ||| | ||||| || |||||||| ||||||||||||| |||| || | ||||||||||||||| ||||||||| |||| | || ||||| || | |
|
|
| T |
3963929 |
actacctaaaactattgtggaaagattctgaaagtgataattcagtagccagtgggttagaaaggttgaaagataaagatcttgtttctgtttctaaaca |
3964028 |
T |
|
| Q |
949 |
taatgttatatctatgcatgacattctacaagaaatgggtcgggaggttgttcgtcaagaatctagtgaagaccctagaaaatgcagtcgattatgggat |
1048 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||| |||||| ||||| ||||||| |||||||| |||| ||||||| ||| | ||||||||||||||| |
|
|
| T |
3964029 |
taatgttatatctatgcatggaattatacaagacatgggtagggagattgttcgccaagaatcaagtggagaccctggaagccgtagtcgattatgggat |
3964128 |
T |
|
| Q |
1049 |
cctgatattatctatgatgtattgaaaaacgacaaggta |
1087 |
Q |
| |
|
||| ||| ||||| ||||| ||||| ||||||||| |
|
|
| T |
3964129 |
gatgacatt---tatgaagtattaaaaaatgacaaggta |
3964164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 138; E-Value: 2e-71
Query Start/End: Original strand, 12 - 401
Target Start/End: Original strand, 3954239 - 3954611
Alignment:
| Q |
12 |
atcatcaatctagtgttgaagaggttgagtaagcacccagttaactcaaaaggacttgttggaattgacaaatcaattgcacatttgaattcattgttac |
111 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| | || ||||| || ||||| | ||||||||| |||| || ||| |||||| | |||||||||| |
|
|
| T |
3954239 |
atcatcaatcttgtgttgaagaggttgagtaagtatcctattaacacagaaggatatattggaattgccaaaccagttggacatttagaatcattgttac |
3954338 |
T |
|
| Q |
112 |
aaaaagagtcagaaaaggtccgtgtcattggaatttggggcatgggaggtattggcaagacaactattgcaggagaaatttttaactaaaattgctctga |
211 |
Q |
| |
|
|| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| | |||| ||| |||| || ||||||||| |
|
|
| T |
3954339 |
gtcaaaagtcagaaaaggtttgtgtcattggaatttggggtatgggaggtattggcaagacaactattgctgaagaagtttataaccgaagttgctctga |
3954438 |
T |
|
| Q |
212 |
atatgaaggttgttgttttttggaaaaggtaagcgagcaattaggaagacatggaataacatttttgaaagaaaaacttttttctacactattagcagaa |
311 |
Q |
| |
|
||||||||||||||||||||||| |||||| || || |||||||||| || | ||| | |||||||| ||||||||||||||| |
|
|
| T |
3954439 |
atatgaaggttgttgttttttggcaaaggtgagtgacgaattaggaaggcacg-----------------gaacagcttttttcaacactattagcagaa |
3954521 |
T |
|
| Q |
312 |
gatgtgaaaatccgttcgccaaatgggttgtctaattatactgtgagaaggattggtcgtatgaaggttcttattgttcttgatgatgtt |
401 |
Q |
| |
|
|||||||||||| ||| |||||||||||||||||| ||| | |||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
3954522 |
gatgtgaaaatcgattcaccaaatgggttgtctaataatattcagagaaggattggccgtatgaaggttcttattgttcttgatgatgtt |
3954611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 115; E-Value: 9e-58
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 3817854 - 3817664
Alignment:
| Q |
51 |
gttaactcaaaaggacttgttggaattgacaaatcaattgcacatttgaattcattgttacaaaaagagtcagaaaaggtccgtgtcattggaatttggg |
150 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| | |||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
3817854 |
gttaactcaaaagaacttgttggaattgacaaaccaattgcggatttgaattcattgttaaagaaagagtcagaacaggtccgtgttattggaatttggg |
3817755 |
T |
|
| Q |
151 |
gcatgggaggtattggcaagacaactattgcaggagaaatttttaactaaaattgctctgaatatgaaggttgttgttttttggaaaaggt |
241 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| |||||| |||| | ||||| | || || ||||| ||||||||||| ||||||||||| |
|
|
| T |
3817754 |
gcatgggcggtattggcaagacaactattgcagaagaaatatttagccaaaatcgttccgattatgatggttgttgtttcttggaaaaggt |
3817664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 115; E-Value: 9e-58
Query Start/End: Original strand, 51 - 241
Target Start/End: Original strand, 3932834 - 3933024
Alignment:
| Q |
51 |
gttaactcaaaaggacttgttggaattgacaaatcaattgcacatttgaattcattgttacaaaaagagtcagaaaaggtccgtgtcattggaatttggg |
150 |
Q |
| |
|
||||| |||||| |||||||||||||||||||| |||||||| ||||||||||||||||| | |||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
3932834 |
gttaaatcaaaaagacttgttggaattgacaaaccaattgcagatttgaattcattgttaaagaaagagtcagaacaggtccgtgttattggaatttggg |
3932933 |
T |
|
| Q |
151 |
gcatgggaggtattggcaagacaactattgcaggagaaatttttaactaaaattgctctgaatatgaaggttgttgttttttggaaaaggt |
241 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| |||||| |||| | ||||| | || || ||||| ||||||||||| ||||||||||| |
|
|
| T |
3932934 |
gcatgggcggtattggcaagacaactattgcagaagaaatatttagccaaaatcgttccgattatgatggttgttgtttcttggaaaaggt |
3933024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 87; E-Value: 5e-41
Query Start/End: Original strand, 95 - 241
Target Start/End: Original strand, 3919654 - 3919800
Alignment:
| Q |
95 |
tttgaattcattgttacaaaaagagtcagaaaaggtccgtgtcattggaatttggggcatgggaggtattggcaagacaactattgcaggagaaattttt |
194 |
Q |
| |
|
|||||||||||||||| | |||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||| |
|
|
| T |
3919654 |
tttgaattcattgttaaagaaagagtcagaacaggtccgtgttattggaatttggggcatgggcggtattggcaagacaactattgcagaagaaatattt |
3919753 |
T |
|
| Q |
195 |
aactaaaattgctctgaatatgaaggttgttgttttttggaaaaggt |
241 |
Q |
| |
|
| | ||||| | || || ||||| ||||||||||| ||||||||||| |
|
|
| T |
3919754 |
agccaaaatcgttccgattatgatggttgttgtttcttggaaaaggt |
3919800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 1143 - 1272
Target Start/End: Complemental strand, 4217782 - 4217653
Alignment:
| Q |
1143 |
ttttcttttacatcaatggcagggcactgatgctattagaagcatacgtgtagacttgtcagcaatcaggaagctgaagttaagccctcatgtatttgct |
1242 |
Q |
| |
|
||||||||||||| ||||| |||| ||||||||||||||||||||||||||| |||||||| || | ||| |||||||||||||||||||||||||||| |
|
|
| T |
4217782 |
ttttcttttacattaatggtagggtactgatgctattagaagcatacgtgtaaacttgtcatcagtttggatgctgaagttaagccctcatgtatttgct |
4217683 |
T |
|
| Q |
1243 |
aagatgaccaacctgcaatttttggatttt |
1272 |
Q |
| |
|
||||||||||||||| |||||||| ||||| |
|
|
| T |
4217682 |
aagatgaccaacctgaaatttttgaatttt |
4217653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1205 - 1272
Target Start/End: Complemental strand, 3809113 - 3809046
Alignment:
| Q |
1205 |
caatcaggaagctgaagttaagccctcatgtatttgctaagatgaccaacctgcaatttttggatttt |
1272 |
Q |
| |
|
|||| |||||||| |||||||||||| |||||||| |||||||||||| || | ||||||| ||||| |
|
|
| T |
3809113 |
caatgaggaagctcgagttaagccctcgtgtatttgataagatgaccaaacttcgatttttgtatttt |
3809046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1205 - 1258
Target Start/End: Complemental strand, 3816694 - 3816640
Alignment:
| Q |
1205 |
caatcaggaagctgaagttaagccctcatgta-tttgctaagatgaccaacctgc |
1258 |
Q |
| |
|
|||| ||| ||||||||||||||| ||||||| |||| ||||||||||||||||| |
|
|
| T |
3816694 |
caatgagggagctgaagttaagccgtcatgtattttgataagatgaccaacctgc |
3816640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 3963129 - 3963267
Alignment:
| Q |
50 |
agttaactcaaaaggacttgttggaattgacaaatcaattgcacatttgaattcattgttacaaaaagagtcagaaaaggtccgtgtcattggaatttgg |
149 |
Q |
| |
|
||||| |||||||||||| ||||||||| ||| || ||||||| | || ||||| ||| ||||||||||| | || ||||| |||| |||||| |
|
|
| T |
3963129 |
agttagctcaaaaggactcattggaattggaaaacaaactgcacatctaaagtcattattaagccaagagtcagaagatgttcgtgttgttgggatttgg |
3963228 |
T |
|
| Q |
150 |
ggcatgggaggtattggcaagacaactattgcaggagaa |
188 |
Q |
| |
|
|| ||||| ||||||||||||||||| |||||| |||| |
|
|
| T |
3963229 |
ggtatgggtggtattggcaagacaacccttgcagaagaa |
3963267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 747; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 747; E-Value: 0
Query Start/End: Original strand, 12 - 1278
Target Start/End: Complemental strand, 13398259 - 13396981
Alignment:
| Q |
12 |
atcatcaatctagtgttgaagaggttgagtaagcacccagttaactcaaaaggacttgttggaattgacaaatcaattgcacatttgaattcattgttac |
111 |
Q |
| |
|
|||||||| || |||||||||||||||| ||||||||| ||||| ||||||||||| |||||||||| ||| ||||||||||||| | ||||||||| |
|
|
| T |
13398259 |
atcatcaagcttgtgttgaagaggttgaataagcaccctgttaaaacaaaaggacttattggaattgagaaagcaattgcacatttagaaccattgttac |
13398160 |
T |
|
| Q |
112 |
aaaaagagtcagaaaaggtccgtgtcattggaatttggggcatgggaggtattggcaagacaactattgcaggagaaatttttaactaaaattgctctga |
211 |
Q |
| |
|
| |||||||||||||||| || || ||||| |||||||| |||||||||||||| |||||||||||||| | |||||||||||| ||| ||| ||||| |
|
|
| T |
13398159 |
atcaagagtcagaaaaggttcgcgtaattggtatttggggtatgggaggtattggaaagacaactattgccgaagaaatttttaatcaaatttgttctga |
13398060 |
T |
|
| Q |
212 |
atatgaaggttgttgttttttggaaaaggtaagcgagcaattaggaagacatggaataacatttttgaaagaaaaacttttttctacactattagcagaa |
311 |
Q |
| |
|
||||||||| ||||||||||||| |||||| || || |||||||||| ||||||||| | ||||| |||||||| ||| |||||||||||||||||||| |
|
|
| T |
13398059 |
atatgaaggatgttgttttttggcaaaggtgagtgaagaattaggaaggcatggaatagcgtttttaaaagaaaagcttgtttctacactattagcagaa |
13397960 |
T |
|
| Q |
312 |
gatgtgaaaatccgttcgccaaatgggttgtctaattatactgtgagaaggattggtcgtatgaaggttcttattgttcttgatgatgttaaggaagaaa |
411 |
Q |
| |
|
||||| |||||| ||| ||||||||||| ||| ||||| | |||||||||||| | |||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
13397959 |
gatgtaaaaatcgattcatcaaatgggttgcctagttatattcagagaaggattggccatatgaaggttcttattgttcttgatgatgttacggaagaag |
13397860 |
T |
|
| Q |
412 |
gtcagctagagatgttatttggaactcttgattggtttcgatctgatagtagaataattttaacaactagagataagcaagtacttattgctaatgaagt |
511 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
13397859 |
gtcagctggagatgttatttggaactcttgattggtttcgatctgatagtagaataattataacaaccagggataagcaagtacttattgctaatgaagt |
13397760 |
T |
|
| Q |
512 |
tgaagatgatgatc---tatatcaggttggggtattggactctagtgaagcacttgagcttttcaatttgaatgcctttaaacaaagtcatcttgaaatg |
608 |
Q |
| |
|
|| ||||||||| ||||| ||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13397759 |
tgttgatgatgatgctttatatgaggttagggtattggattctagtgaagcacttgcgcttttcaatttgaatgcctttaaacaaagtcatcttgaaaac |
13397660 |
T |
|
| Q |
609 |
gagtactatgatctatcaaagaaggtggtcgattatgccaaaggaattccattagttcttgaagttttggctcatctacttcgtggaaaagaca------ |
702 |
Q |
| |
|
|||| |||||| ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||| | ||||||||||| | | |
|
|
| T |
13397659 |
gagttttatgatgtatcaaagagggtggtcgattatgccaaaggaatcccattagttcttaaagttttggctcatatgcttcgtggaaagaataaagaac |
13397560 |
T |
|
| Q |
703 |
----ggaaagtcagctggacaaacttgaaagactgccaaataaaaaatttcaagatgtaatgaggctcagttatgatgatcttgatcgtttagagcaaaa |
798 |
Q |
| |
|
|||||||||||| ||||||||| |||||||||||| | ||||| |||| ||||||||||| ||||||| |||||||||||||||||||||||| || |
|
|
| T |
13397559 |
tatgggaaagtcagctagacaaacttaaaagactgccaattcaaaaagttcatgatgtaatgagactcagttttgatgatcttgatcgtttagagcagaa |
13397460 |
T |
|
| Q |
799 |
gtattttttagatattgcatgtttcttcaaagggttgaggttgaaagtggattacatgaaacttttactgaaagattttgaaagtgataatgcagtggct |
898 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| |||| ||||||||||| ||||||||||||||| ||||||||| ||||||||||||| | || ||| |
|
|
| T |
13397459 |
gtattttttagatattgcatgtttcttcaacgggatgagtttgaaagtggagtacatgaaacttttattgaaagattatgaaagtgataattctgtagct |
13397360 |
T |
|
| Q |
899 |
attgggttagaaaggttaaaagataaatctcttataactatttctgaagataatgttatatctatgcatgacattctacaagaaatgggtcgggaggttg |
998 |
Q |
| |
|
||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
13397359 |
attgggttagaaaggttgaaagataaagctcttataactatttctaaagataatgttatatctatgcatgacattctacaggaaatgggtcgcgaggttg |
13397260 |
T |
|
| Q |
999 |
ttcgtcaagaatctagtgaagaccctagaaaatgcagtcgattatgggatcctgatattatctatgatgtattgaaaaacgacaaggtataatatatttg |
1098 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| || | ||||| |
|
|
| T |
13397259 |
ttcgccaagaatctagtgaagaccctagaaaatgcagtcgattatgggatcctgatattatctacgatgtattgaaaaatgacaaggta-aaaaaatttg |
13397161 |
T |
|
| Q |
1099 |
gcgattttagataacatttgtaattttggtaaaaaatattttgattttcttttacatcaatggcagggcactgatgctattagaagcatacgtgtagact |
1198 |
Q |
| |
|
|| |||||||||||||||||| |||||||||||||||||||||||||||||||| | |||| ||||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
13397160 |
gcaattttagataacatttgtcattttggtaaaaaatattttgattttcttttataataatgacagggtactgatgctattagaagcataagtgtagact |
13397061 |
T |
|
| Q |
1199 |
tgtcagcaatcaggaagctgaagttaagccctcatgtatttgctaagatgaccaacctgcaatttttggattttcatgat |
1278 |
Q |
| |
|
|||||||||| |||||||||||||||||||| | |||||||| |||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
13397060 |
tgtcagcaattaggaagctgaagttaagcccgcctgtatttgataagatgaccaacctgaaatttttgtattttcatgat |
13396981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1360 (Bit Score: 99; Significance: 3e-48; HSPs: 1)
Name: scaffold1360
Description:
Target: scaffold1360; HSP #1
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 51 - 189
Target Start/End: Original strand, 1829 - 1967
Alignment:
| Q |
51 |
gttaactcaaaaggacttgttggaattgacaaatcaattgcacatttgaattcattgttacaaaaagagtcagaaaaggtccgtgtcattggaatttggg |
150 |
Q |
| |
|
||||| |||||| |||||||||||||||||||| |||||||| ||||||||||||||||| | |||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
1829 |
gttaaatcaaaaagacttgttggaattgacaaaccaattgcagatttgaattcattgttaaagaaagagtcagaacaggtccgtgttattggaatttggg |
1928 |
T |
|
| Q |
151 |
gcatgggaggtattggcaagacaactattgcaggagaaa |
189 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| ||||| |
|
|
| T |
1929 |
gcatgggcggtattggcaagacaactattgcagaagaaa |
1967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 40; Significance: 0.0000000000005; HSPs: 10)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 908 - 1087
Target Start/End: Complemental strand, 7074914 - 7074735
Alignment:
| Q |
908 |
gaaaggttaaaagataaatctcttataactatttctgaagataatgttatatctatgcatgacattctacaagaaatgggtcgggaggttgttcgtcaag |
1007 |
Q |
| |
|
|||||| ||||||||||| ||||| ||||||||||| || | | || |||| |||||||||||| ||||||||| | | ||||| ||||||| |||| |
|
|
| T |
7074914 |
gaaaggctaaaagataaagctcttgtaactatttctcaacaaagcattgtatcaatgcatgacattatacaagaaacagctagggagattgttcgccaag |
7074815 |
T |
|
| Q |
1008 |
aatctagtgaagaccctagaaaatgcagtcgattatgggatcctgatattatctatgatgtattgaaaaacgacaaggta |
1087 |
Q |
| |
|
||||| |||||| ||| |||| | || ||| ||| |||||||||| || ||| ||||||||||| | ||||||||| |
|
|
| T |
7074814 |
aatctgttgaagaacctggaaaccgaagccgactattggatcctgatgacatttatcatgtattgaaagatgacaaggta |
7074735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 367 - 494
Target Start/End: Complemental strand, 7081508 - 7081381
Alignment:
| Q |
367 |
gtcgtatgaaggttcttattgttcttgatgatgttaaggaagaaagtcagctagagatgttatttggaactcttgattggtttcgatctgatagtagaat |
466 |
Q |
| |
|
||||||||||||||||| |||||||||| ||||| ||||| | || |||| || ||| ||||||| |||||||||||| || | | ||||||||| |
|
|
| T |
7081508 |
gtcgtatgaaggttcttgttgttcttgacgatgtcaaggatccacaacaattagaaattttaattggaacacttgattggtttggaacaggtagtagaat |
7081409 |
T |
|
| Q |
467 |
aattttaacaactagagataagcaagta |
494 |
Q |
| |
|
||| ||||||||| ||||||||||||| |
|
|
| T |
7081408 |
cattgtaacaactaaagataagcaagta |
7081381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 360 - 493
Target Start/End: Complemental strand, 7092901 - 7092768
Alignment:
| Q |
360 |
aggattggtcgtatgaaggttcttattgttcttgatgatgttaaggaagaaagtcagctagagatgttatttggaactcttgattggtttcgatctgata |
459 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| ||||| || || | | || |||| | ||| ||||||| ||||||||||| || | |||| |
|
|
| T |
7092901 |
aggattcgtcgtatgaaggttcttattgttcttgacgatgtcaatgattcacgacaagtagaaactttaattggaacacttgattggttaggaacagata |
7092802 |
T |
|
| Q |
460 |
gtagaataattttaacaactagagataagcaagt |
493 |
Q |
| |
|
||||||| ||| ||||||||| |||||| ||||| |
|
|
| T |
7092801 |
gtagaatcattataacaactaaagataaacaagt |
7092768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 597 - 644
Target Start/End: Original strand, 7031024 - 7031071
Alignment:
| Q |
597 |
catcttgaaatggagtactatgatctatcaaagaaggtggtcgattat |
644 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||||| ||||||||||| |
|
|
| T |
7031024 |
catctcgaaatggagtactatgagctatcaaagaagatggtcgattat |
7031071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 188
Target Start/End: Complemental strand, 7069266 - 7069135
Alignment:
| Q |
57 |
tcaaaaggacttgttggaattgacaaatcaattgcacatttgaattcattgttacaaaaagagtcagaaaaggtccgtgtcattggaatttggggcatgg |
156 |
Q |
| |
|
|||||||||||| ||||||||| |||| |||| ||| | | | |||||||||||| |||||| || | || |||| |||||||||||||| ||| |
|
|
| T |
7069266 |
tcaaaaggacttattggaattggcaaacaaatttcacgtgtagaatcattgttacaagtagagtcgcaagatgttcgtgctattggaatttggggtatga |
7069167 |
T |
|
| Q |
157 |
gaggtattggcaagacaactattgcaggagaa |
188 |
Q |
| |
|
| |||||||| |||||||||||||||| |||| |
|
|
| T |
7069166 |
gtggtattggaaagacaactattgcagaagaa |
7069135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 151
Target Start/End: Complemental strand, 7098699 - 7098598
Alignment:
| Q |
50 |
agttaactcaaaaggacttgttggaattgacaaatcaattgcacatttgaattcattgttacaaaaagagtcagaaaaggtccgtgtcattggaatttgg |
149 |
Q |
| |
|
|||||| ||||||||||||| ||||||||| ||| |||||||||| | | |||||||||||| ||||||| || | || |||| |||||||||||| |
|
|
| T |
7098699 |
agttaattcaaaaggacttgatggaattgaaaaacaaattgcacatgtagaatcattgttacaagtagagtcacaagatgttcgtgctattggaatttgg |
7098600 |
T |
|
| Q |
150 |
gg |
151 |
Q |
| |
|
|| |
|
|
| T |
7098599 |
gg |
7098598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 565 - 644
Target Start/End: Complemental strand, 7075264 - 7075182
Alignment:
| Q |
565 |
agcttttcaatttgaatgcctttaa---acaaagtcatcttgaaatggagtactatgatctatcaaagaaggtggtcgattat |
644 |
Q |
| |
|
|||||||||| ||| |||||||||| ||||| ||||||||||||||||||||| | ||||||||||| |||| |||||| |
|
|
| T |
7075264 |
agcttttcaacttgcatgcctttaataaacaaaagcatcttgaaatggagtactataagctatcaaagaaaatggtggattat |
7075182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 372 - 403
Target Start/End: Original strand, 7036514 - 7036545
Alignment:
| Q |
372 |
atgaaggttcttattgttcttgatgatgttaa |
403 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
7036514 |
atgaaggttcttattgttcttgatgatgttaa |
7036545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 905 - 983
Target Start/End: Original strand, 7037045 - 7037123
Alignment:
| Q |
905 |
ttagaaaggttaaaagataaatctcttataactatttctgaagataatgttatatctatgcatgacattctacaagaaa |
983 |
Q |
| |
|
||||| ||| ||||||||||| ||||| ||||||||||| || | | | || |||| |||||||||||| ||||||||| |
|
|
| T |
7037045 |
ttagacaggctaaaagataaagctcttgtaactatttctcaataaattattgtatcaatgcatgacattatacaagaaa |
7037123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 180
Target Start/End: Complemental strand, 7081828 - 7081698
Alignment:
| Q |
50 |
agttaactcaaaaggacttgttggaattgacaaatcaattgcacatttgaattcattgttacaaaaagagtcagaaaaggtccgtgtcattggaatttgg |
149 |
Q |
| |
|
|||||| ||||||||| || |||||||||| ||| ||| || || || | |||||||||||| ||||||| || | || |||| |||||||||||| |
|
|
| T |
7081828 |
agttaattcaaaaggagttattggaattgaaaaacaaatatcatatgtggaatcattgttacaagtagagtcacaagatgttcgtgctattggaatttgg |
7081729 |
T |
|
| Q |
150 |
ggcatgggaggtattggcaagacaactattg |
180 |
Q |
| |
|
|| ||| | |||||||| ||||||| ||||| |
|
|
| T |
7081728 |
gggatgagtggtattggaaagacaattattg |
7081698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 32; Significance: 0.00000003; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 438 - 493
Target Start/End: Complemental strand, 42858726 - 42858671
Alignment:
| Q |
438 |
cttgattggtttcgatctgatagtagaataattttaacaactagagataagcaagt |
493 |
Q |
| |
|
|||||||||||| |||||| ||||||||| || ||||||| |||||||||||||| |
|
|
| T |
42858726 |
cttgattggtttggatctggtagtagaatcatcgtaacaaccagagataagcaagt |
42858671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 176
Target Start/End: Complemental strand, 42859033 - 42858991
Alignment:
| Q |
134 |
tgtcattggaatttggggcatgggaggtattggcaagacaact |
176 |
Q |
| |
|
||||||||| |||||||||||||| |||||||| ||||||||| |
|
|
| T |
42859033 |
tgtcattggcatttggggcatgggcggtattgggaagacaact |
42858991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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