View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4326-Insertion-14 (Length: 197)
Name: NF4326-Insertion-14
Description: NF4326
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4326-Insertion-14 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 28873446 - 28873250
Alignment:
| Q |
1 |
ctaacccaactgtaggagtataaattattggagcaaattctttgatgttatcaataagtgcctgaagagaatgaaaggtaacaacataagaaccatttgg |
100 |
Q |
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| T |
28873446 |
ctaacccaactgtaggagtataaattattggagcaaattctttgatgttatcaataagtgcctgaagagaatgaaaggtaacaacataagaaccatttgg |
28873347 |
T |
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| Q |
101 |
aaataaatgttaccatattttctcacataacagcctaatttcatcatcagactcactctatagtacaatgtctcattcctgtcatgtagtctattta |
197 |
Q |
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| T |
28873346 |
aaataaatgttaccatattttctcacataacagcctaatttcatcatcagactcactctatagtacaatgtctcattcctgtcatgtagtctattta |
28873250 |
T |
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Target: chr8 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 12023030 - 12023122
Alignment:
| Q |
1 |
ctaacccaactgtaggagtataaattattggagcaaattctttgatgttatcaataagtgcctgaag-agaatgaaaggtaacaacataagaa |
92 |
Q |
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|||| ||||||||||||||||| |||||||||||||| ||||| || ||||||||||| ||||||| | || |||| ||| ||||||||||| |
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| T |
12023030 |
ctaatccaactgtaggagtatatattattggagcaaactctttaatattatcaataagaacctgaagaaaaacgaaatgtaccaacataagaa |
12023122 |
T |
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