View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4326-Insertion-5 (Length: 46)
Name: NF4326-Insertion-5
Description: NF4326
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4326-Insertion-5 |
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| [»] chr2 (2 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 42; Significance: 7e-16; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 42; E-Value: 7e-16
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 36098778 - 36098737
Alignment:
| Q |
5 |
aaaactatctaccactttttaggcatcaagctcaaaataaat |
46 |
Q |
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| T |
36098778 |
aaaactatctaccactttttaggcatcaagctcaaaataaat |
36098737 |
T |
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Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 18579658 - 18579695
Alignment:
| Q |
5 |
aaaactatctaccactttttaggcatcaagctcaaaat |
42 |
Q |
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||||||||| |||||||||| ||||||||||||||||| |
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| T |
18579658 |
aaaactatccaccacttttttggcatcaagctcaaaat |
18579695 |
T |
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