View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4328-Insertion-40 (Length: 119)

Name: NF4328-Insertion-40
Description: NF4328
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4328-Insertion-40
NF4328-Insertion-40
[»] chr8 (46 HSPs)
chr8 (1-119)||(28706028-28706146)
chr8 (1-119)||(33799437-33799555)
chr8 (2-117)||(34615165-34615280)
chr8 (1-119)||(42168846-42168964)
chr8 (1-119)||(38033811-38033929)
chr8 (1-119)||(43693347-43693465)
chr8 (1-119)||(43638563-43638681)
chr8 (1-110)||(40414827-40414936)
chr8 (1-119)||(40415467-40415585)
chr8 (38-119)||(15032249-15032328)
chr8 (20-119)||(485166-485262)
chr8 (1-119)||(22549289-22549406)
chr8 (1-119)||(24861553-24861670)
chr8 (38-97)||(31171740-31171799)
chr8 (1-94)||(28705805-28705897)
chr8 (1-101)||(42168616-42168715)
chr8 (38-101)||(40415751-40415814)
chr8 (1-119)||(2417125-2417241)
chr8 (41-101)||(22549575-22549635)
chr8 (76-119)||(41363866-41363909)
chr8 (38-93)||(3589188-3589245)
chr8 (38-101)||(38033582-38033645)
chr8 (42-97)||(19242088-19242141)
chr8 (42-97)||(19315272-19315325)
chr8 (1-119)||(26452535-26452652)
chr8 (40-97)||(16576152-16576209)
chr8 (67-101)||(24861865-24861899)
chr8 (44-97)||(28167338-28167391)
chr8 (41-91)||(42603695-42603743)
chr8 (4-101)||(44050900-44050996)
chr8 (4-89)||(40415069-40415153)
chr8 (42-91)||(40702602-40702649)
chr8 (74-119)||(41275604-41275649)
chr8 (42-91)||(41856900-41856947)
chr8 (42-97)||(31171479-31171535)
chr8 (44-95)||(41856635-41856686)
chr8 (44-95)||(42603951-42604002)
chr8 (19-101)||(484916-484997)
chr8 (48-99)||(2417530-2417579)
chr8 (42-97)||(16575912-16575965)
chr8 (42-97)||(16576216-16576269)
chr8 (48-99)||(28705748-28705797)
chr8 (48-99)||(38033532-38033581)
chr8 (38-97)||(41856391-41856450)
chr8 (42-97)||(43637186-43637241)
chr8 (48-99)||(43637371-43637420)
[»] chr3 (82 HSPs)
chr3 (1-119)||(25576479-25576597)
chr3 (3-119)||(48087441-48087557)
chr3 (1-119)||(19453116-19453234)
chr3 (1-119)||(34693177-34693295)
chr3 (17-119)||(53826599-53826701)
chr3 (1-119)||(24702159-24702277)
chr3 (1-119)||(47065901-47066019)
chr3 (20-119)||(42949926-42950025)
chr3 (1-119)||(13895757-13895875)
chr3 (1-119)||(44835374-44835492)
chr3 (42-119)||(39416876-39416953)
chr3 (1-101)||(42383283-42383383)
chr3 (1-119)||(44927677-44927795)
chr3 (17-86)||(11378840-11378909)
chr3 (38-119)||(2268420-2268499)
chr3 (1-101)||(25576249-25576348)
chr3 (38-119)||(36135221-36135300)
chr3 (4-101)||(24701930-24702026)
chr3 (38-119)||(3494955-3495034)
chr3 (38-119)||(4004013-4004092)
chr3 (38-101)||(13895528-13895591)
chr3 (20-119)||(34049941-34050037)
chr3 (20-119)||(49139963-49140059)
chr3 (20-119)||(54390656-54390752)
chr3 (47-97)||(25887542-25887592)
chr3 (4-101)||(44835145-44835241)
chr3 (38-119)||(50997602-50997681)
chr3 (38-119)||(2646802-2646881)
chr3 (1-97)||(37281915-37282010)
chr3 (4-101)||(42383516-42383612)
chr3 (38-101)||(34692948-34693011)
chr3 (38-101)||(44927961-44928024)
chr3 (20-119)||(46403217-46403313)
chr3 (38-95)||(19452811-19452868)
chr3 (41-94)||(20375556-20375610)
chr3 (49-93)||(6464012-6464057)
chr3 (48-97)||(6754440-6754488)
chr3 (1-101)||(11378635-11378734)
chr3 (4-101)||(39416605-39416701)
chr3 (3-119)||(43477271-43477386)
chr3 (49-97)||(15637226-15637273)
chr3 (19-101)||(3494688-3494769)
chr3 (48-97)||(6464280-6464328)
chr3 (48-97)||(18440980-18441028)
chr3 (48-97)||(19486054-19486102)
chr3 (48-97)||(20375818-20375866)
chr3 (37-97)||(25887273-25887334)
chr3 (74-119)||(49610703-49610748)
chr3 (38-97)||(34646929-34646988)
chr3 (3-94)||(36721053-36721143)
chr3 (67-119)||(49218689-49218741)
chr3 (47-97)||(774274-774322)
chr3 (47-97)||(7246601-7246651)
chr3 (47-97)||(18441249-18441299)
chr3 (47-97)||(19486323-19486373)
chr3 (47-97)||(27187820-27187870)
chr3 (42-97)||(42323316-42323369)
chr3 (19-101)||(50997867-50997948)
chr3 (42-97)||(51013205-51013258)
chr3 (44-97)||(8633027-8633080)
chr3 (44-97)||(41578409-41578462)
chr3 (67-101)||(47066213-47066247)
chr3 (44-97)||(49273907-49273960)
chr3 (41-93)||(6754703-6754756)
chr3 (42-91)||(41804147-41804194)
chr3 (74-119)||(51695566-51695611)
chr3 (42-91)||(52569336-52569383)
chr3 (38-101)||(2268153-2268216)
chr3 (48-96)||(42322995-42323041)
chr3 (48-96)||(46346217-46346263)
chr3 (44-95)||(52569073-52569124)
chr3 (58-97)||(2429006-2429044)
chr3 (19-101)||(4003746-4003827)
chr3 (42-93)||(7954447-7954496)
chr3 (42-97)||(33449082-33449135)
chr3 (19-101)||(34050206-34050287)
chr3 (42-97)||(34472003-34472056)
chr3 (48-99)||(42383613-42383662)
chr3 (42-97)||(43570149-43570202)
chr3 (42-97)||(46346539-46346592)
chr3 (19-101)||(49139713-49139794)
chr3 (19-101)||(54390921-54391002)
[»] chr2 (49 HSPs)
chr2 (1-119)||(12968186-12968304)
chr2 (1-118)||(29906787-29906904)
chr2 (3-119)||(42120216-42120332)
chr2 (1-119)||(10360084-10360201)
chr2 (1-119)||(22493475-22493593)
chr2 (3-119)||(42240985-42241101)
chr2 (1-119)||(16582028-16582146)
chr2 (1-119)||(18393553-18393672)
chr2 (4-93)||(32735102-32735191)
chr2 (1-102)||(10359853-10359953)
chr2 (1-119)||(32734851-32734969)
chr2 (2-101)||(22493725-22493823)
chr2 (1-101)||(42120465-42120564)
chr2 (38-119)||(29067933-29068012)
chr2 (20-119)||(3936970-3937066)
chr2 (20-119)||(17424993-17425089)
chr2 (20-119)||(43983060-43983156)
chr2 (38-101)||(16582312-16582375)
chr2 (4-98)||(18393805-18393898)
chr2 (48-97)||(16253680-16253728)
chr2 (38-107)||(22002050-22002117)
chr2 (38-101)||(8557381-8557444)
chr2 (41-97)||(33404502-33404558)
chr2 (1-119)||(39394095-39394213)
chr2 (48-119)||(5420673-5420742)
chr2 (42-97)||(6977065-6977118)
chr2 (42-97)||(18036088-18036143)
chr2 (74-119)||(3941941-3941986)
chr2 (44-97)||(10364296-10364349)
chr2 (42-97)||(16253944-16254000)
chr2 (65-97)||(31991885-31991917)
chr2 (42-97)||(10364562-10364615)
chr2 (42-97)||(17796034-17796087)
chr2 (42-97)||(34521608-34521661)
chr2 (42-97)||(35491864-35491917)
chr2 (42-97)||(43491679-43491732)
chr2 (42-111)||(29111370-29111437)
chr2 (38-101)||(29111601-29111664)
chr2 (44-95)||(35492128-35492179)
chr2 (37-97)||(35492316-35492376)
chr2 (48-96)||(41498696-41498742)
chr2 (44-95)||(43491944-43491995)
chr2 (42-97)||(2919289-2919342)
chr2 (48-99)||(3936669-3936719)
chr2 (47-97)||(8557145-8557195)
chr2 (19-101)||(17425258-17425339)
chr2 (48-99)||(18393902-18393951)
chr2 (48-99)||(22493824-22493873)
chr2 (76-119)||(39799828-39799871)
[»] chr1 (87 HSPs)
chr1 (1-119)||(46180168-46180286)
chr1 (1-119)||(45689319-45689437)
chr1 (1-119)||(47487925-47488043)
chr1 (4-119)||(35576539-35576654)
chr1 (1-119)||(49262876-49262994)
chr1 (1-119)||(27035206-27035324)
chr1 (1-119)||(49598779-49598897)
chr1 (1-119)||(50068147-50068265)
chr1 (1-119)||(39224085-39224203)
chr1 (1-119)||(48568292-48568410)
chr1 (2-119)||(42571665-42571782)
chr1 (37-119)||(12791197-12791279)
chr1 (1-117)||(41874772-41874888)
chr1 (37-111)||(3658681-3658755)
chr1 (43-119)||(30309762-30309838)
chr1 (4-101)||(27034976-27035073)
chr1 (1-101)||(47487695-47487794)
chr1 (1-99)||(3658921-3659018)
chr1 (4-101)||(30309491-30309587)
chr1 (4-101)||(51270252-51270348)
chr1 (38-119)||(19160517-19160596)
chr1 (38-119)||(22527707-22527786)
chr1 (2-101)||(50067917-50068015)
chr1 (4-101)||(29707197-29707293)
chr1 (4-101)||(49262655-49262751)
chr1 (1-101)||(45689568-45689667)
chr1 (1-101)||(46179938-46180037)
chr1 (1-112)||(29707426-29707540)
chr1 (1-97)||(12790936-12791031)
chr1 (1-97)||(17697468-17697563)
chr1 (1-97)||(18170474-18170569)
chr1 (20-119)||(29762129-29762227)
chr1 (72-119)||(27486649-27486696)
chr1 (1-119)||(29436173-29436290)
chr1 (48-119)||(39856843-39856912)
chr1 (22-101)||(41874544-41874622)
chr1 (1-119)||(44337208-44337325)
chr1 (1-119)||(51270002-51270119)
chr1 (37-97)||(16081766-16081827)
chr1 (37-97)||(18170668-18170728)
chr1 (42-111)||(21484574-21484641)
chr1 (4-101)||(39223857-39223952)
chr1 (4-101)||(48568064-48568160)
chr1 (3-101)||(49598546-49598646)
chr1 (38-97)||(38044612-38044671)
chr1 (76-119)||(49427587-49427630)
chr1 (48-90)||(16098022-16098063)
chr1 (38-95)||(18842937-18842994)
chr1 (43-97)||(24270292-24270344)
chr1 (40-94)||(42571442-42571496)
chr1 (4-101)||(44336979-44337075)
chr1 (38-119)||(44597901-44597982)
chr1 (41-97)||(24363475-24363531)
chr1 (38-101)||(21484436-21484499)
chr1 (76-119)||(13635260-13635303)
chr1 (42-97)||(13973149-13973202)
chr1 (42-97)||(14173686-14173739)
chr1 (42-97)||(14772462-14772517)
chr1 (79-118)||(48226760-48226799)
chr1 (42-97)||(49396929-49396982)
chr1 (44-97)||(17686021-17686074)
chr1 (4-101)||(29436423-29436519)
chr1 (44-97)||(37778569-37778622)
chr1 (41-97)||(12790693-12790749)
chr1 (48-97)||(13283926-13283973)
chr1 (48-93)||(13973481-13973524)
chr1 (41-97)||(17685779-17685835)
chr1 (42-91)||(37778310-37778357)
chr1 (42-91)||(38046362-38046409)
chr1 (42-91)||(41780924-41780971)
chr1 (44-95)||(6436262-6436313)
chr1 (48-96)||(12790879-12790925)
chr1 (41-97)||(13284188-13284244)
chr1 (44-95)||(23343130-23343181)
chr1 (41-97)||(24269786-24269842)
chr1 (48-96)||(38044798-38044844)
chr1 (44-95)||(38044857-38044908)
chr1 (48-96)||(40532892-40532938)
chr1 (42-97)||(6435997-6436050)
chr1 (19-101)||(19160782-19160863)
chr1 (19-101)||(22527972-22528053)
chr1 (42-97)||(23342866-23342919)
chr1 (42-97)||(36909786-36909839)
chr1 (48-95)||(41781221-41781267)
chr1 (48-99)||(45689668-45689717)
chr1 (48-99)||(46179888-46179937)
chr1 (48-99)||(50067867-50067916)
[»] chr4 (83 HSPs)
chr4 (1-119)||(45939725-45939844)
chr4 (1-119)||(27759527-27759645)
chr4 (1-119)||(31824518-31824636)
chr4 (1-119)||(51027656-51027774)
chr4 (1-119)||(21711730-21711848)
chr4 (1-119)||(25762798-25762916)
chr4 (3-119)||(49064179-49064295)
chr4 (21-119)||(51428101-51428199)
chr4 (3-119)||(46816416-46816532)
chr4 (37-119)||(1226359-1226441)
chr4 (1-119)||(33163433-33163551)
chr4 (1-119)||(37866607-37866725)
chr4 (42-119)||(20901598-20901675)
chr4 (49-119)||(14330631-14330701)
chr4 (42-107)||(242346-242411)
chr4 (1-101)||(20901335-20901434)
chr4 (1-101)||(27759776-27759875)
chr4 (20-119)||(55796943-55797039)
chr4 (38-119)||(21017105-21017184)
chr4 (4-101)||(38132779-38132875)
chr4 (38-119)||(40353701-40353780)
chr4 (38-93)||(17211773-17211829)
chr4 (4-95)||(51427858-51427948)
chr4 (4-101)||(21711981-21712077)
chr4 (4-101)||(39589379-39589475)
chr4 (48-97)||(18412816-18412864)
chr4 (1-101)||(25763047-25763146)
chr4 (1-101)||(45939974-45940073)
chr4 (1-97)||(14330358-14330453)
chr4 (20-119)||(6177226-6177322)
chr4 (1-119)||(9489878-9489995)
chr4 (42-97)||(31324395-31324450)
chr4 (20-119)||(41794473-41794569)
chr4 (42-97)||(43889428-43889481)
chr4 (20-119)||(49094945-49095041)
chr4 (20-119)||(56139110-56139206)
chr4 (48-97)||(17211488-17211536)
chr4 (37-97)||(18413073-18413134)
chr4 (42-111)||(32937834-32937901)
chr4 (41-97)||(49817307-49817363)
chr4 (38-101)||(37866891-37866954)
chr4 (22-101)||(46816184-46816262)
chr4 (1-119)||(1042949-1043066)
chr4 (42-97)||(21169676-21169729)
chr4 (76-119)||(28082438-28082481)
chr4 (1-119)||(39589129-39589246)
chr4 (2-93)||(242105-242194)
chr4 (38-111)||(20778796-20778868)
chr4 (56-93)||(21411842-21411879)
chr4 (41-97)||(42886753-42886809)
chr4 (44-95)||(26591581-26591632)
chr4 (48-96)||(49423364-49423410)
chr4 (58-93)||(21411566-21411601)
chr4 (42-97)||(36776448-36776501)
chr4 (42-97)||(44560109-44560162)
chr4 (19-101)||(56139375-56139456)
chr4 (67-101)||(885320-885354)
chr4 (42-91)||(22437142-22437189)
chr4 (4-97)||(49064431-49064523)
chr4 (1-90)||(51027437-51027525)
chr4 (38-90)||(13855022-13855075)
chr4 (42-99)||(24606972-24607027)
chr4 (37-97)||(24607211-24607271)
chr4 (38-90)||(31324703-31324756)
chr4 (41-94)||(49817572-49817623)
chr4 (48-96)||(2773563-2773609)
chr4 (65-93)||(9717840-9717868)
chr4 (44-95)||(22437401-22437452)
chr4 (1-84)||(31824305-31824387)
chr4 (48-96)||(34529403-34529449)
chr4 (44-95)||(49791602-49791653)
chr4 (42-97)||(957384-957437)
chr4 (19-101)||(6176976-6177057)
chr4 (66-97)||(17292183-17292214)
chr4 (19-101)||(21016838-21016919)
chr4 (7-101)||(28082690-28082783)
chr4 (38-101)||(32937585-32937648)
chr4 (42-97)||(34153215-34153268)
chr4 (48-99)||(46816134-46816183)
chr4 (19-101)||(49095210-49095291)
chr4 (42-97)||(49423686-49423740)
chr4 (38-97)||(51027241-51027299)
chr4 (48-99)||(51027376-51027425)
[»] chr5 (59 HSPs)
chr5 (1-119)||(19400562-19400680)
chr5 (1-119)||(3601540-3601658)
chr5 (1-101)||(40011834-40011934)
chr5 (1-119)||(1971564-1971682)
chr5 (1-119)||(3458989-3459107)
chr5 (42-119)||(7082420-7082497)
chr5 (4-101)||(3169984-3170080)
chr5 (1-101)||(19400811-19400910)
chr5 (20-119)||(8576053-8576149)
chr5 (1-87)||(3169766-3169852)
chr5 (38-119)||(27661306-27661385)
chr5 (1-101)||(40012065-40012163)
chr5 (20-119)||(7141-7237)
chr5 (1-101)||(1971813-1971912)
chr5 (1-101)||(3601789-3601888)
chr5 (38-119)||(28881190-28881269)
chr5 (3-101)||(3459240-3459337)
chr5 (38-112)||(22283777-22283849)
chr5 (37-93)||(12743168-12743225)
chr5 (38-93)||(12805987-12806043)
chr5 (47-93)||(12806332-12806379)
chr5 (20-119)||(19036586-19036682)
chr5 (76-119)||(8538153-8538196)
chr5 (48-119)||(11027976-11028045)
chr5 (76-119)||(11346908-11346951)
chr5 (47-93)||(12743511-12743558)
chr5 (76-119)||(30709797-30709840)
chr5 (4-97)||(7082671-7082763)
chr5 (38-95)||(10398273-10398330)
chr5 (74-119)||(541598-541643)
chr5 (42-91)||(4724004-4724051)
chr5 (48-97)||(12742909-12742957)
chr5 (37-97)||(36311871-36311932)
chr5 (37-97)||(18308742-18308801)
chr5 (38-101)||(33371112-33371175)
chr5 (42-97)||(18308484-18308537)
chr5 (67-97)||(13131035-13131065)
chr5 (44-97)||(36349990-36350043)
chr5 (41-97)||(1695519-1695575)
chr5 (38-86)||(2599483-2599532)
chr5 (48-97)||(12805727-12805775)
chr5 (41-97)||(35566000-35566056)
chr5 (41-97)||(36349745-36349801)
chr5 (42-97)||(1400232-1400285)
chr5 (48-96)||(4723682-4723728)
chr5 (4-95)||(11347157-11347247)
chr5 (65-97)||(17195314-17195346)
chr5 (19-101)||(6891-6972)
chr5 (42-97)||(1695013-1695066)
chr5 (47-97)||(1695282-1695332)
chr5 (48-99)||(3459338-3459387)
chr5 (19-101)||(8575803-8575884)
chr5 (41-95)||(17366398-17366452)
chr5 (44-99)||(19036282-19036335)
chr5 (19-101)||(19036336-19036417)
chr5 (48-99)||(19400911-19400960)
chr5 (44-99)||(22284116-22284169)
chr5 (44-99)||(28881536-28881589)
chr5 (38-65)||(36350251-36350278)
[»] scaffold0589 (2 HSPs)
scaffold0589 (1-119)||(2469-2587)
scaffold0589 (72-101)||(4805-4834)
[»] chr7 (60 HSPs)
chr7 (1-119)||(47269100-47269218)
chr7 (17-119)||(2205940-2206042)
chr7 (1-119)||(17183417-17183535)
chr7 (1-119)||(18237766-18237884)
chr7 (1-119)||(48220631-48220749)
chr7 (5-119)||(28978943-28979057)
chr7 (1-119)||(34141067-34141184)
chr7 (1-119)||(39477127-39477245)
chr7 (42-119)||(26601706-26601783)
chr7 (43-119)||(41217816-41217892)
chr7 (38-119)||(13920508-13920587)
chr7 (1-100)||(30360966-30361064)
chr7 (37-119)||(30360718-30360800)
chr7 (1-101)||(18238015-18238114)
chr7 (1-101)||(48220402-48220501)
chr7 (1-101)||(17183666-17183765)
chr7 (20-119)||(9367029-9367125)
chr7 (20-119)||(10523271-10523367)
chr7 (48-119)||(17320137-17320206)
chr7 (20-119)||(20564961-20565057)
chr7 (1-119)||(45363140-45363257)
chr7 (40-101)||(28978873-28978934)
chr7 (1-101)||(34141315-34141414)
chr7 (4-101)||(41218066-41218162)
chr7 (42-97)||(2356513-2356566)
chr7 (38-101)||(26601436-26601499)
chr7 (20-119)||(40588751-40588849)
chr7 (76-119)||(17839526-17839569)
chr7 (48-119)||(20378639-20378708)
chr7 (76-119)||(34139368-34139411)
chr7 (44-97)||(48271140-48271193)
chr7 (41-93)||(1642257-1642310)
chr7 (41-97)||(15337567-15337623)
chr7 (37-90)||(4230291-4230346)
chr7 (45-99)||(48270873-48270925)
chr7 (48-97)||(1642525-1642571)
chr7 (44-97)||(10224559-10224612)
chr7 (44-97)||(20877714-20877767)
chr7 (44-97)||(21186961-21187014)
chr7 (44-97)||(21651015-21651068)
chr7 (41-97)||(20877471-20877527)
chr7 (48-97)||(21614393-21614440)
chr7 (41-97)||(28113813-28113869)
chr7 (65-97)||(3380626-3380658)
chr7 (38-97)||(21614447-21614506)
chr7 (48-96)||(28113998-28114044)
chr7 (38-97)||(28114055-28114114)
chr7 (41-97)||(30361245-30361301)
chr7 (38-97)||(42683139-42683198)
chr7 (48-99)||(9366728-9366778)
chr7 (19-101)||(9366779-9366860)
chr7 (42-93)||(15337832-15337881)
chr7 (19-101)||(20565226-20565307)
chr7 (44-99)||(20565308-20565361)
chr7 (48-99)||(26601386-26601435)
chr7 (42-97)||(36393751-36393804)
chr7 (48-99)||(39476849-39476898)
chr7 (42-97)||(41049010-41049063)
chr7 (42-97)||(42735489-42735542)
chr7 (42-97)||(43351027-43351080)
[»] scaffold0176 (2 HSPs)
scaffold0176 (1-119)||(1992-2109)
scaffold0176 (1-101)||(2240-2339)
[»] scaffold0192 (2 HSPs)
scaffold0192 (1-119)||(17804-17922)
scaffold0192 (4-95)||(17581-17671)
[»] chr6 (36 HSPs)
chr6 (1-119)||(3765674-3765792)
chr6 (1-119)||(35058622-35058740)
chr6 (38-119)||(24021023-24021102)
chr6 (1-119)||(801369-801485)
chr6 (38-119)||(2192601-2192680)
chr6 (38-94)||(34134879-34134935)
chr6 (20-119)||(27640384-27640480)
chr6 (20-119)||(6205688-6205784)
chr6 (38-119)||(11692655-11692734)
chr6 (38-101)||(35058393-35058456)
chr6 (1-119)||(29066757-29066874)
chr6 (1-119)||(29075770-29075887)
chr6 (1-119)||(29108344-29108461)
chr6 (1-119)||(29110742-29110859)
chr6 (42-97)||(30257506-30257559)
chr6 (4-97)||(801618-801710)
chr6 (36-97)||(20192543-20192605)
chr6 (36-97)||(20242049-20242111)
chr6 (36-97)||(22136033-22136095)
chr6 (36-97)||(22143386-22143448)
chr6 (44-95)||(12397270-12397321)
chr6 (38-97)||(14482746-14482806)
chr6 (65-97)||(17465287-17465319)
chr6 (19-101)||(6205953-6206034)
chr6 (42-97)||(13402762-13402815)
chr6 (44-93)||(4495397-4495446)
chr6 (48-97)||(13403313-13403362)
chr6 (48-101)||(14123099-14123152)
chr6 (47-97)||(14123421-14123470)
chr6 (4-101)||(29067007-29067103)
chr6 (4-101)||(29108594-29108690)
chr6 (41-97)||(4495615-4495671)
chr6 (44-97)||(14115262-14115313)
chr6 (19-101)||(11692920-11693001)
chr6 (38-101)||(27640667-27640729)
chr6 (42-97)||(32027555-32027608)
[»] scaffold0861 (2 HSPs)
scaffold0861 (1-101)||(2404-2503)
scaffold0861 (42-75)||(2200-2233)
[»] scaffold0031 (1 HSPs)
scaffold0031 (38-119)||(85528-85607)
[»] scaffold0268 (1 HSPs)
scaffold0268 (38-112)||(14677-14749)
[»] scaffold0004 (1 HSPs)
scaffold0004 (42-111)||(64159-64226)
[»] scaffold0859 (1 HSPs)
scaffold0859 (63-93)||(1169-1199)
[»] scaffold1700 (2 HSPs)
scaffold1700 (47-99)||(384-436)
scaffold1700 (1-67)||(48-114)


Alignment Details
Target: chr8 (Bit Score: 91; Significance: 1e-44; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 1e-44
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 28706028 - 28706146
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    |||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  28706028 ggaaaaacatgaacgttgggcgaaatgcttgagtcattgccgtttggcaagtttgaattaccccatttcacaagtaagacaattgttgtagttggaatgc 28706127  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  28706128 accttaccctaactaatga 28706146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 1e-44
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 33799437 - 33799555
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||||| |||||||||||||||| |||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33799437 ggaaaaacatgaacgctgggcgaaatgcttgagtcatggccgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 33799536  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  33799537 accttaccctaactaatga 33799555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 9e-43
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 34615280 - 34615165
Alignment:
Q  2 gaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    ||||||||||||||||||||||||||||||| |||| || ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  34615280 gaaaaacatgaacgttgggcgaaatgcttgagtcatggtcgtttgtcaagtttgaattaccccatttaagaggtaagacaattgttgtagttggaatgca 34615181  T
Q  102 tcttaccctaattaat 117  Q
     |||||||||| ||||    
T  34615180 ccttaccctaactaat 34615165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 42168846 - 42168964
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||||| |||||||||||||||| |||| |  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  42168846 ggaaaaacatgaacgctgggcgaaatgcttgagtcatggccgtttggcaagtttgaattaccccatttcaaaggtaagacaattgttgtagttggaatgc 42168945  T
Q  101 atcttaccctaattaatga 119  Q
    |||||| ||||| ||||||    
T  42168946 atcttatcctaactaatga 42168964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 38033811 - 38033929
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||||| |||||||||||||||| |||| |  ||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  38033811 ggaaaaacatgaacgctgggcgaaatgcttgagtcatggccgtttatcaagtttgaattacccaatttcagaggtaagacaattgttgtagttggaatgc 38033910  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  38033911 accttaccctaactaatga 38033929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 43693465 - 43693347
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||| |  | ||||||||||||| || |||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  43693465 ggaaaaacatgaatgccgagcgaaatgcttgagtccttgccgtttggcaagtttgaattaccccatttcagaggtaagaaaattgttgtagttggaatgc 43693366  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  43693365 accttaccctaactaatga 43693347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 43638563 - 43638681
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||| |  | ||||||||||||| || | | | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  43638563 ggaaaaacatgaatgccgagcgaaatgcttgagtcctggctatttggcaagtttgaattaccccatttcagaggtaagacaattattgtagttggaatgc 43638662  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  43638663 accttaccctaactaatga 43638681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 7e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 40414936 - 40414827
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||| |  | ||||||||||||| || | |  |||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  40414936 ggaaaaacatgaatgccgagcgaaatgcttgagtcctggccgtttgataagtttgaattaccccatttcagaggtaagagaattgttgtagttggaatgc 40414837  T
Q  101 atcttaccct 110  Q
    | ||||||||    
T  40414836 accttaccct 40414827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 4e-23
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 40415585 - 40415467
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||| |  | ||||||||||| | | || |  |||||| |||||||||||||||||||||| |||||||| |||||||||||||| |||||    
T  40415585 ggaaaaacatgaatgccgagcgaaatgcttaagttatggccgtttggtaagtttgaattaccccatttcataggtaagagaattgttgtagttgaaatgc 40415486  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  40415485 accttaccctaactaatga 40415467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 38 - 119
Target Start/End: Original strand, 15032249 - 15032328
Alignment:
Q  38 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||| |||||||||||||||||||| || ||| ||||||| |||||||||||||||||| |||||||||| ||||||    
T  15032249 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaaatgttgtagttggaatgcaccttaccctaactaatga 15032328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 485166 - 485262
Alignment:
Q  20 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || ||||||||||||||||||||||| |||||||||| ||||||    
T  485166 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaattgttgtagttggaatgcaccttaccctaactaatga 485262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 22549406 - 22549289
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    ||||||||||||| | || ||||||||||||| || | ||||||||||| ||||||||| | | |||| || ||||||||||||||||| |||||||||     
T  22549406 ggaaaaacatgaatgctgagcgaaatgcttgagtcct-gttgtttggcaggtttgaatttatctcatt-caaaggtaagacaattgttgaagttggaata 22549309  T
Q  100 catcttaccctaattaatga 119  Q
    || |||||||||| ||||||    
T  22549308 caccttaccctaactaatga 22549289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 24861670 - 24861553
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    ||||||||||||| |  | ||||||||||||| |||| ||||||||||| ||||||||| | | |||| || ||||||||||||||||| || |||||||    
T  24861670 ggaaaaacatgaatgccgagcgaaatgcttgagtcat-gttgtttggcaggtttgaatttatctcatt-caaaggtaagacaattgttgcagatggaatg 24861573  T
Q  100 catcttaccctaattaatga 119  Q
    || |||||||||| ||||||    
T  24861572 caccttaccctaactaatga 24861553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 31171740 - 31171799
Alignment:
Q  38 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||  ||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  31171740 tgttgtttaacaagtttgaattatctcatttcagaggtaagacaattgttgtagttggaa 31171799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 28705897 - 28705805
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttg 94  Q
    ||||||||| ||| || ||||||||||||||| || | |||||||| ||||||||||||  |||  |||| |||||||||||||||||||||||    
T  28705897 ggaaaaacacgaatgtggggcgaaatgcttgagtcct-gttgtttgacaagtttgaattttccccattcaaaggtaagacaattgttgtagttg 28705805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 42168715 - 42168616
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaat-taccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    ||||||||||||| |  ||||||||||||||| || | |||||||||||||||||| | |||||||||  | ||||| ||||||||||||||||||||||    
T  42168715 ggaaaaacatgaatgcggggcgaaatgcttgagtcct-gttgtttggcaagtttgactgtaccccattcga-aggtaggacaattgttgtagttggaatg 42168618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 40415751 - 40415814
Alignment:
Q  38 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||||| |||||||||  |||  |||| ||||||||||||||||||||||||||||||    
T  40415751 tgttgtttggcaggtttgaatttaccctattcaaaggtaagacaattgttgtagttggaatgca 40415814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 2417241 - 2417125
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||| |  | ||||||||||||| || |  |||||||||| |||| | ||| | |||| || ||||||||||||||||| |||||||||||    
T  2417241 ggaaaaacatgaatgccgagcgaaatgcttgagtccta-ttgtttggcaggtttaatttatctcatt-caaaggtaagacaattgttgaagttggaatgc 2417144  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  2417143 accttaccctaactaatga 2417125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 22549575 - 22549635
Alignment:
Q  41 tgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    ||||||||||||||||||| ||||||||| | ||||||||||||||||| ||||||||||||    
T  22549575 tgtttggcaagtttgaattgaccccatttaa-aggtaagacaattgttgcagttggaatgca 22549635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 119
Target Start/End: Complemental strand, 41363909 - 41363866
Alignment:
Q  76 aagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    |||||||||||||||||||||||||| |||||||||| ||||||    
T  41363909 aagacaattgttgtagttggaatgcaccttaccctaactaatga 41363866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 3589188 - 3589245
Alignment:
Q  38 tgttgtttggcaagtttgaattaccccatttc--agaggtaagacaattgttgtagtt 93  Q
    |||||||| |||||||||||||| | ||||||  ||||||||||||||||||||||||    
T  3589188 tgttgtttagcaagtttgaattatctcatttcagagaggtaagacaattgttgtagtt 3589245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 38033645 - 38033582
Alignment:
Q  38 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||| ||||||||||| ||  |||| || ||||||||||||||||||||||||||||||    
T  38033645 tgttgtttggtaagtttgaatttactacatt-caaaggtaagacaattgttgtagttggaatgca 38033582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 19242088 - 19242141
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||||| ||||||| |||||| | ||||||||||||||||||||||    
T  19242088 gtttggcaagtttgaactacccca-ttcaga-gaaagacaattgttgtagttggaa 19242141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 19315272 - 19315325
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||||| ||||||| |||||| | ||||||||||||||||||||||    
T  19315272 gtttggcaagtttgaactacccca-ttcaga-gaaagacaattgttgtagttggaa 19315325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 26452652 - 26452535
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    |||||||||| || || | |||||||| |||| || | ||||||||||| ||||||||| | | |||| || ||||| ||||||||||| |||||||||     
T  26452652 ggaaaaacataaatgtcgagcgaaatgtttgagtcct-gttgtttggcaggtttgaatttatctcatt-caaaggtatgacaattgttgcagttggaata 26452555  T
Q  100 catcttaccctaattaatga 119  Q
    || |||||||||| ||||||    
T  26452554 caccttaccctaactaatga 26452535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 16576152 - 16576209
Alignment:
Q  40 ttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||||||||| ||| |||| || |||||||| |||||||||||||||||    
T  16576152 ttgtttggcaagtttgaatttacctcatt-caaaggtaagataattgttgtagttggaa 16576209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 67 - 101
Target Start/End: Original strand, 24861865 - 24861899
Alignment:
Q  67 ttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||| ||||||||||||||||||||||||||||||    
T  24861865 ttcaaaggtaagacaattgttgtagttggaatgca 24861899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 28167338 - 28167391
Alignment:
Q  44 ttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||| |||||||| |||| |||||| |||||||||||||||||||    
T  28167338 ttggcaagtttgaatttacccca-ttcaaaggtaacacaattgttgtagttggaa 28167391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 42603743 - 42603695
Alignment:
Q  41 tgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtag 91  Q
    ||||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  42603743 tgtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtag 42603695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 44050900 - 44050996
Alignment:
Q  4 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||| || | ||||||||||||| || |||||||||| || ||||||||| | | |||| || ||||||||||||||| | ||||||||||||    
T  44050900 aaaacatgaatgtcgagcgaaatgcttgagtc-ttgttgtttgacaggtttgaatttatctcatt-caaaggtaagacaattgtggcagttggaatgca 44050996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 40415069 - 40415153
Alignment:
Q  4 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgt 89  Q
    |||||||||| || ||| |||||| |||| || | ||||||||||| |||||||||  |||  |||| ||||||||||||||||||    
T  40415069 aaaacatgaatgtcgggtgaaatgattgagtcct-gttgtttggcaggtttgaatttaccctattcaaaggtaagacaattgttgt 40415153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 40702649 - 40702602
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtag 91  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  40702649 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtag 40702602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 41275649 - 41275604
Alignment:
Q  74 gtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||||| ||| |||||||||||| |||||||||| ||||||    
T  41275649 gtaagacaattattgcagttggaatgcaccttaccctaactaatga 41275604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 41856900 - 41856947
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtag 91  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  41856900 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtag 41856947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 31171535 - 31171479
Alignment:
Q  42 gtttggcaagtttgaattaccc-catttcagaggtaagacaattgttgtagttggaa 97  Q
    |||| |||||||||||||| || ||||| |||||| ||| |||||||||||||||||    
T  31171535 gtttagcaagtttgaattaacctcattttagaggttagataattgttgtagttggaa 31171479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 41856686 - 41856635
Alignment:
Q  44 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgg 95  Q
    |||| ||||||||||| |||||||| || ||||||||||||||||||||||||    
T  41856686 ttggtaagtttgaatttaccccatt-caaaggtaagacaattgttgtagttgg 41856635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 42603951 - 42604002
Alignment:
Q  44 ttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttgg 95  Q
    |||||||||||||| |||||||| |||| |||||| |||||||||||||||||    
T  42603951 ttggcaagtttgaatttacccca-ttcaaaggtaacacaattgttgtagttgg 42604002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 484997 - 484916
Alignment:
Q  19 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| ||||||||||| |||||||||||    
T  484997 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgtggttggaatgca 484916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 2417579 - 2417530
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    |||||||||||| ||||||| |||||| ||||||||||||| ||||||||||    
T  2417579 caagtttgaattgccccatt-cagagg-aagacaattgttgcagttggaatg 2417530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 16575965 - 16575912
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||| ||||||||| |||| || ||| ||||||||||||||||||||||    
T  16575965 gtttggcaagtatgaattacctcatt-caaagg-aagacaattgttgtagttggaa 16575912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 16576269 - 16576216
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||| ||||||||| ||||||||||  |||||| ||||||||||||||||||||||    
T  16576269 gtttagcaagtttggattaccccatc-cagagg-aagacaattgttgtagttggaa 16576216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 99
Target Start/End: Original strand, 28705748 - 28705797
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    |||||||||||| ||||||  ||||| |||||||||||||||||||||||||    
T  28705748 caagtttgaattgccccatc-cagag-taagacaattgttgtagttggaatg 28705797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 99
Target Start/End: Original strand, 38033532 - 38033581
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    |||||||||||| ||||||  ||||| |||||||||||||||||||||||||    
T  38033532 caagtttgaattgccccatc-cagag-taagacaattgttgtagttggaatg 38033581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 41856450 - 41856391
Alignment:
Q  38 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||| |||||||||||||  |||  ||||| ||||||| |||||||| ||||||||    
T  41856450 tgttgtttagcaagtttgaattttccccattcagtggtaagataattgttgcagttggaa 41856391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 43637241 - 43637186
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||| |||||||||||||  ||  |||||| || ||||||||||||||||||||||    
T  43637241 gtttagcaagtttgaatttgccactttcaggggcaagacaattgttgtagttggaa 43637186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 99
Target Start/End: Original strand, 43637371 - 43637420
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    |||||||||||| ||||||  ||||| |||||||||||||||||||||||||    
T  43637371 caagtttgaattgccccatc-cagag-taagacaattgttgtagttggaatg 43637420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 1e-44; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 1e-44
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 25576479 - 25576597
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||||| |||||||||||||||| |||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25576479 ggaaaaacatgaacgctgggcgaaatgcttgagtcatggccgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 25576578  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  25576579 accttaccctaaataatga 25576597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 3e-36
Query Start/End: Original strand, 3 - 119
Target Start/End: Original strand, 48087441 - 48087557
Alignment:
Q  3 aaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcat 102  Q
    ||||||||||| | || ||||||||||||| || | |  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  48087441 aaaaacatgaatgctgagcgaaatgcttgagtcctggccgtttggcaagtttgaattaccccattttagaggtaagacaattgttgtagttggaatgcac 48087540  T
Q  103 cttaccctaattaatga 119  Q
    |||||||||||||||||    
T  48087541 cttaccctaattaatga 48087557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 19453116 - 19453234
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||| || | ||||||||||||| |||| |  ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19453116 ggaaaaacatgaatgtcgagcgaaatgcttgagtcatggccgtttgacaagtttgaattaccccatttcagaggtaagagaattgttgtagttggaatgc 19453215  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  19453216 accttaccctaactaatga 19453234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 34693177 - 34693295
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||| || | ||||||||||||| || | |  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  34693177 ggaaaaacatgaatgtcgcgcgaaatgcttgagtcttggccgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgcagttggaatgc 34693276  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  34693277 accttaccctaactaatga 34693295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 53826599 - 53826701
Alignment:
Q  17 tgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaa 116  Q
    |||||||||||||||| |||| |  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  53826599 tgggcgaaatgcttgagtcatggccgtttgacaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcaccttaccctaactaa 53826698  T
Q  117 tga 119  Q
    |||    
T  53826699 tga 53826701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 24702159 - 24702277
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||| |  | ||||||||||||| || | |  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24702159 ggaaaaacatgaatgccgagcgaaatgcttgagtcctggccgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgcagttggaatgc 24702258  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  24702259 accttaccctaactaatga 24702277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 47066019 - 47065901
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||| ||||||| ||| ||||||||| || | || |  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  47066019 ggaaaaatatgaacgctggacgaaatgctcgagttatggccgtttggcaagtttgaattacctcatttcagaggtaagacaattgttgtagttggaatgc 47065920  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  47065919 accttaccctaactaatga 47065901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 8e-31
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 42949926 - 42950025
Alignment:
Q  20 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||||||| || | |  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  42949926 gcgaaatgcttgagtcctaggcgtttggcaagtttgaattatcccatttcagaggtaagacaattgttgtagttggaatgcaccttaccctaactaatga 42950025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 8e-28
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 13895757 - 13895875
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||| |  | ||||||||||||| || | |  ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13895757 ggaaaaacatgaatgccgagcgaaatgcttgagtcctggccgtttgacaagtttgaattaccccatttcagaggtaagacaattgttgcagttggaatgc 13895856  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||| ||| ||||||    
T  13895857 accttaccttaactaatga 13895875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 8e-28
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 44835374 - 44835492
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||| |  | ||||| ||||||| || | |  ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  44835374 ggaaaaacatgaatgccgagcgaagtgcttgagtcctggccgtttgacaagtttgaattaccccatttcaaaggtaagacaattgttgtagttggaatgc 44835473  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  44835474 accttaccctaactaatga 44835492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 3e-27
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 39416876 - 39416953
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  39416876 gtttggcaagtttgaattatcccattttagaggtaagacaattgttgtagttggaatgcaccttaccctaactaatga 39416953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 3e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 42383383 - 42383283
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||| |  | | |||||| |||| |||| |  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  42383383 ggaaaaacatgaatgccgagtgaaatgtttgagtcatggccgtttggcaagtttgaattaccccattttagaggtaagacaattgttgtagttggaatgc 42383284  T
Q  101 a 101  Q
    |    
T  42383283 a 42383283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 4e-23
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 44927795 - 44927677
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||| |  | ||||||||||||| || |    |||||||||||||||||||||||||||   ||||||||||||||||| |||||||||||    
T  44927795 ggaaaaacatgaatgccgagcgaaatgcttgagtcctgaccgtttggcaagtttgaattaccccattttttaggtaagacaattgttgcagttggaatgc 44927696  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  44927695 accttaccctaactaatga 44927677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 11378840 - 11378909
Alignment:
Q  17 tgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgt 86  Q
    |||||||||||||||| |||| || ||||| |||||||||||||||||||||||||||||||||||||||    
T  11378840 tgggcgaaatgcttgagtcatggtcgtttgacaagtttgaattaccccatttcagaggtaagacaattgt 11378909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 4e-20
Query Start/End: Original strand, 38 - 119
Target Start/End: Original strand, 2268420 - 2268499
Alignment:
Q  38 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||| ||||||    
T  2268420 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatga 2268499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 4e-20
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 25576348 - 25576249
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    ||||||||||||||   ||||||||||||||| || | |||||||||| |||||||||| |||||||| || ||||||||||||||||||||||||||||    
T  25576348 ggaaaaacatgaacacggggcgaaatgcttgagtcct-gttgtttggccagtttgaatttaccccatt-caaaggtaagacaattgttgtagttggaatg 25576251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 4e-20
Query Start/End: Original strand, 38 - 119
Target Start/End: Complemental strand, 36135300 - 36135221
Alignment:
Q  38 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||| |||| ||||||    
T  36135300 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcatcttactctaactaatga 36135221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 24702026 - 24701930
Alignment:
Q  4 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||| |  ||| ||||||||||| |||  ||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||    
T  24702026 aaaacatgaatgccgggtgaaatgcttgagtcag-gttgtttggcaagtttgaatttaccccatt-caaaggtaagacaattgttgtagttggaatgca 24701930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 38 - 119
Target Start/End: Original strand, 3494955 - 3495034
Alignment:
Q  38 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    |||||||||  ||||||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||| ||||||    
T  3494955 tgttgtttgaaaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatga 3495034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 38 - 119
Target Start/End: Original strand, 4004013 - 4004092
Alignment:
Q  38 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||| ||||| |||| ||||||    
T  4004013 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttactctaactaatga 4004092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 4e-17
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 13895591 - 13895528
Alignment:
Q  38 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||    
T  13895591 tgttgtttggcaagtttgaattgaccccatt-caaaggtaagacaattgttgtagttggaatgca 13895528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 34050037 - 34049941
Alignment:
Q  20 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || ||||||||||||||||||||||| |||||||||| ||||||    
T  34050037 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaattgttgtagttggaatgcaccttaccctaactaatga 34049941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 49139963 - 49140059
Alignment:
Q  20 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || ||||||||||||||||||||||| |||||||||| ||||||    
T  49139963 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaattgttgtagttggaatgcaccttaccctaactaatga 49140059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 54390752 - 54390656
Alignment:
Q  20 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || ||||||||||||||||||||||| |||||||||| ||||||    
T  54390752 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaattgttgtagttggaatgcaccttaccctaactaatga 54390656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 6e-16
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 25887542 - 25887592
Alignment:
Q  47 gcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  25887542 gcaagtttgaattatcccatttcataggtaagacaattgttgtagttggaa 25887592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 6e-16
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 44835241 - 44835145
Alignment:
Q  4 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||| |  |||||||||| |||| || | ||||||||| ||||||||||| |||||||| || ||||||||||||||||||||||||||||||    
T  44835241 aaaacatgaatgccgggcgaaatgtttgagtcct-gttgtttggtaagtttgaatttaccccatt-caaaggtaagacaattgttgtagttggaatgca 44835145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 6e-16
Query Start/End: Original strand, 38 - 119
Target Start/End: Complemental strand, 50997681 - 50997602
Alignment:
Q  38 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||| ||||||||||||||||||||  | ||  || ||||||||||||||||||||||| |||||||||| ||||||    
T  50997681 tgttgtttgacaagtttgaattaccccattcaaaag--aatacaattgttgtagttggaatgcaccttaccctaactaatga 50997602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 119
Target Start/End: Original strand, 2646802 - 2646881
Alignment:
Q  38 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||| || ||||||||||||||||| || | | |||||||||||||||||||||||||| |||||||||| ||||||    
T  2646802 tgttgtttgacaggtttgaattaccccatt-caaatg-aagacaattgttgtagttggaatgcaccttaccctaactaatga 2646881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 37281915 - 37282010
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||| |  ||||||||||||||| || | |||||||||| |||||||| |||||||| |||| |||||| |||||||||||||||||||    
T  37281915 ggaaaaacatgaatgccgggcgaaatgcttgagtcct-gttgtttggccagtttgaatttacccca-ttcaaaggtaacacaattgttgtagttggaa 37282010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 42383516 - 42383612
Alignment:
Q  4 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||| |  ||| ||||||||||| || | |||||||||||||||||||||   ||| |||| || |||||||||||||||||||||||||||    
T  42383516 aaaacatgaatgccgggtgaaatgcttgagtcct-gttgtttggcaagtttgaatttatccaattcaaagataagacaattgttgtagttggaatgca 42383612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 34693011 - 34692948
Alignment:
Q  38 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||||||||||||||| |||||||| || ||||||||||||||||| ||||||||||||    
T  34693011 tgttgtttggcaagtttgaattgaccccatt-cacaggtaagacaattgttggagttggaatgca 34692948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 44927961 - 44928024
Alignment:
Q  38 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    ||||| |||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||    
T  44927961 tgttgcttggcaagtttgaattgacccca-ttcaaaggtaagacaattgttgtagttggaatgca 44928024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 46403313 - 46403217
Alignment:
Q  20 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || |||| |||||||||||||||||| |||||||||| ||||||    
T  46403313 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaaatgttgtagttggaatgcaccttaccctaactaatga 46403217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 19452868 - 19452811
Alignment:
Q  38 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgg 95  Q
    |||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||    
T  19452868 tgttgtttggcaagtttgaatttaccccatt-caaaggtaagacaattgttgtagttgg 19452811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 20375610 - 20375556
Alignment:
Q  41 tgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttg 94  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  20375610 tgtttagcaagtttgaatttaccccatttcagaggtaagacaattattgtagttg 20375556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 49 - 93
Target Start/End: Complemental strand, 6464057 - 6464012
Alignment:
Q  49 aagtttgaatt-accccatttcagaggtaagacaattgttgtagtt 93  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  6464057 aagtttgaatttaccccatttcagaggtaagacaattgttgtagtt 6464012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 6754488 - 6754440
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  6754488 caagtttgaattaccccatttcaga-gtaagacagttgttgtagttggaa 6754440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 11378734 - 11378635
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    ||||||||||||| |   ||| |||||||||| || | ||||||||||||||||||||| |||||||| || ||| ||||||||||||| ||||||||||    
T  11378734 ggaaaaacatgaatgcgaggcaaaatgcttgagtcct-gttgtttggcaagtttgaatttaccccatt-caaaggcaagacaattgttggagttggaatg 11378637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 39416701 - 39416605
Alignment:
Q  4 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||| |  ||| |||||| |||| |||| ||||||||| |||||||||||  |||  |||| |||||||| |||||||||||||||||||||    
T  39416701 aaaacatgaatgcggggtgaaatgtttgagtcat-gttgtttgggaagtttgaatttgccccattcaaaggtaagataattgttgtagttggaatgca 39416605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 43477386 - 43477271
Alignment:
Q  3 aaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    ||||||||||| |  | ||||||||||||| || | ||||||||||| ||||||||| | | |||| || |||||||||| |||||| ||||||||||||    
T  43477386 aaaaacatgaatgccgagcgaaatgcttgactcct-gttgtttggcaggtttgaatttatctcatt-caaaggtaagacagttgttgaagttggaatgca 43477289  T
Q  102 tcttaccctaattaatga 119  Q
      ||||||||||||||||    
T  43477288 cattaccctaattaatga 43477271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 15637273 - 15637226
Alignment:
Q  49 aagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||    
T  15637273 aagtttgaattacctcatttcagag-taagacaattgttgtagttggaa 15637226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 3494769 - 3494688
Alignment:
Q  19 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||||||| |||| ||||||| ||||||||||||| | |||||| || |||||| ||||||||||| |||||||||||    
T  3494769 ggcgaaatgcttgagtcat-gttgttttgcaagtttgaatttatcccatt-caaaggtaacacaattgttgttgttggaatgca 3494688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 6464280 - 6464328
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||||||||||||||| |||||| | |||||||||||||||    
T  6464280 caagtttgaattaccccatttcaga-gtaagagagttgttgtagttggaa 6464328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 18441028 - 18440980
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||| ||||||||||| ||||||||| |||||||||||||||||||||||    
T  18441028 caagcttgaattacccaatttcagag-taagacaattgttgtagttggaa 18440980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 19486102 - 19486054
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||| ||||||||||| ||||||||| |||||||||||||||||||||||    
T  19486102 caagcttgaattacccaatttcagag-taagacaattgttgtagttggaa 19486054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 20375818 - 20375866
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||| ||||||||||| ||||||||||| ||||||||||||    
T  20375818 caagtttgaattaacccatttcaga-gtaagacaatttttgtagttggaa 20375866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 25887334 - 25887273
Alignment:
Q  37 ttgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||| |||| ||||||||||||| ||| ||||||| |||||||| |||||||||||||||||    
T  25887334 ttgtcgtttagcaagtttgaatttacctcatttcaaaggtaagataattgttgtagttggaa 25887273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 49610748 - 49610703
Alignment:
Q  74 gtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||||||||| |||||||||||| |||||||||| ||||||    
T  49610748 gtaagacaattgttgcagttggaatgcaccttaccctaactaatga 49610703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 34646988 - 34646929
Alignment:
Q  38 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||| |||||||||||| |||||||| || |||||| |||||||||||||||||||    
T  34646988 tgttgtttgacaagtttgaatttaccccatt-caaaggtaacacaattgttgtagttggaa 34646929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 36721143 - 36721053
Alignment:
Q  3 aaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttg 94  Q
    ||||||||||| || ||||||||||||||| || | |||||||||  || ||||||| ||| |||| || |||||||||||||||||||||||    
T  36721143 aaaaacatgaatgtcgggcgaaatgcttgagtcct-gttgtttgggcagattgaatttacctcatt-caaaggtaagacaattgttgtagttg 36721053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 49218689 - 49218741
Alignment:
Q  67 ttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    |||| ||||||||||||||||| ||||||||||||  ||||||||| ||||||    
T  49218689 ttcaaaggtaagacaattgttgcagttggaatgcactttaccctaactaatga 49218741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 774274 - 774322
Alignment:
Q  47 gcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||| ||  |||||||||||||||||||||||| ||||||||    
T  774274 gcaagtttgaatttcc--atttcagaggtaagacaattgttgcagttggaa 774322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 7246601 - 7246651
Alignment:
Q  47 gcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||| |||||||| |||| ||||||||||||||||||||||||||    
T  7246601 gcaagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttggaa 7246651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 18441249 - 18441299
Alignment:
Q  47 gcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||| | |||||||||||||||| |||||||||||||||||||    
T  18441249 gcaagtttgaatttatcccatttcagaggtaa-acaattgttgtagttggaa 18441299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 19486323 - 19486373
Alignment:
Q  47 gcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||| | |||||||||||||||| |||||||||||||||||||    
T  19486323 gcaagtttgaatttatcccatttcagaggtaa-acaattgttgtagttggaa 19486373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 27187820 - 27187870
Alignment:
Q  47 gcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||| ||| |||| |||||||||||||||||||||||||||||    
T  27187820 gcaagtttgaatttacctcatt-cagaggtaagacaattgttgtagttggaa 27187870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 42323316 - 42323369
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||| |||||||||||||||||| |||||||| |||||||||||||||| |||||    
T  42323316 gtttgccaagtttgaattacccca-ttcagagg-aagacaattgttgtagctggaa 42323369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 50997867 - 50997948
Alignment:
Q  19 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || ||||||||||||||||| ||||||||||||    
T  50997867 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaagacaattgttggagttggaatgca 50997948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 51013205 - 51013258
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||    
T  51013205 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtagctggaa 51013258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 8633080 - 8633027
Alignment:
Q  44 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||||| |||||||| || |||||| |||||||||||||||||||    
T  8633080 ttggcaagtttgaatttaccccatt-caaaggtaacacaattgttgtagttggaa 8633027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 41578409 - 41578462
Alignment:
Q  44 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||||| ||| |||| || ||||||||||||||||||||||||||    
T  41578409 ttggcaagtttgaatttacctcatt-caaaggtaagacaattgttgtagttggaa 41578462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 67 - 101
Target Start/End: Original strand, 47066213 - 47066247
Alignment:
Q  67 ttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||| ||||||||||||||||||||||||||||||    
T  47066213 ttcaaaggtaagacaattgttgtagttggaatgca 47066247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 49273907 - 49273960
Alignment:
Q  44 ttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||| |||||||| |||| |||||| |||||||||||||||||||    
T  49273907 ttggcaagtttgaatttacccca-ttcaaaggtaacacaattgttgtagttggaa 49273960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 6754703 - 6754756
Alignment:
Q  41 tgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagtt 93  Q
    ||||| ||||| ||||||| ||| |||||| |||||||||||||||||||||||    
T  6754703 tgtttagcaagattgaatttaccacatttcggaggtaagacaattgttgtagtt 6754756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 41804194 - 41804147
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtag 91  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  41804194 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtag 41804147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 51695566 - 51695611
Alignment:
Q  74 gtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||||| ||| |||||||||||| |||||||||| ||||||    
T  51695566 gtaagacaattattgcagttggaatgcaccttaccctaactaatga 51695611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 52569336 - 52569383
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtag 91  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  52569336 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtag 52569383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 2268216 - 2268153
Alignment:
Q  38 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||| ||| ||||||||| | |||||| || ||||||||||||||| ||||||||||||||    
T  2268216 tgttgttttgcaggtttgaatttatcccatt-caaaggtaagacaattgtcgtagttggaatgca 2268153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 42322995 - 42323041
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgga 96  Q
    ||||||||||||||||||||| ||||| ||||||||||||| |||||||    
T  42322995 caagtttgaattaccccattt-agagg-aagacaattgttgcagttgga 42323041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 46346217 - 46346263
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgga 96  Q
    |||||||||||||||||| |||||||| ||||||||||||| |||||||    
T  46346217 caagtttgaattacccca-ttcagagg-aagacaattgttgcagttgga 46346263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 52569124 - 52569073
Alignment:
Q  44 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgg 95  Q
    |||||||||||||||| ||| |||| || ||||||||||||||||||||||||    
T  52569124 ttggcaagtttgaatttacctcatt-cacaggtaagacaattgttgtagttgg 52569073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 97
Target Start/End: Original strand, 2429006 - 2429044
Alignment:
Q  58 ttaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  2429006 ttaccccatt-caaaggtaagacaattgttgtagttggaa 2429044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 4003827 - 4003746
Alignment:
Q  19 ggcgaaatgcttgaatcattgttgtttggcaagtttgaat-taccccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||||||| |||| |||||||| || |||||||| || | |||| || |||||| |||||||||| ||||||||||||    
T  4003827 ggcgaaatgcttgagtcat-gttgtttgacaggtttgaatctatctcatt-caaaggtaacacaattgttggagttggaatgca 4003746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 93
Target Start/End: Complemental strand, 7954496 - 7954447
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagtt 93  Q
    ||||||||||||||||||||| || |||| ||| ||||||||||||||||||    
T  7954496 gtttggcaagtttgaattacctca-ttcaaagg-aagacaattgttgtagtt 7954447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 33449082 - 33449135
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||| |||||||||||||||||| | |||||| || |||||||||||||||||||    
T  33449082 gtttgacaagtttgaattacccca-tccagagg-aaaacaattgttgtagttggaa 33449135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 34050206 - 34050287
Alignment:
Q  19 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| ||||||||||| |||||||||||    
T  34050206 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgtggttggaatgca 34050287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 34472003 - 34472056
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||||||||||||| |||| ||| ||||||||| |||||| |||||    
T  34472003 gtttggcaagtttgaattacccca-ttcaaagg-aagacaatttttgtagctggaa 34472056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 42383662 - 42383613
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    |||||||||||| ||||||  ||||| |||||||||||||||||||||||||    
T  42383662 caagtttgaattgccccatc-cagag-taagacaattgttgtagttggaatg 42383613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 43570202 - 43570149
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||||||||||| || |||| ||| |||||||||||||||| |||||    
T  43570202 gtttggcaagtttgaattacctca-ttcaaagg-aagacaattgttgtagctggaa 43570149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 46346539 - 46346592
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||||||||| |||| |||| ||| |||||||||||||||| |||||    
T  46346539 gtttggcaagtttgaatta-cccaattcaaagg-aagacaattgttgtagctggaa 46346592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 49139794 - 49139713
Alignment:
Q  19 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| ||||||||||| |||||||||||    
T  49139794 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgtggttggaatgca 49139713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 54390921 - 54391002
Alignment:
Q  19 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| ||||||||||| |||||||||||    
T  54390921 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgtggttggaatgca 54391002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 1e-44; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 1e-44
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 12968186 - 12968304
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||||| |||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  12968186 ggaaaaacatgaacgctgggcgaaatgcttgagtcatggtcgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggagtgc 12968285  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  12968286 accttaccctaactaatga 12968304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 1e-41
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 29906904 - 29906787
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||||| |||||||||||||||| |||| |  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29906904 ggaaaaacatgaacgctgggcgaaatgcttgagtcatggccgtttggcaagtttgaattaccccatttcagaggtaagacagttgttgtagttggaatgc 29906805  T
Q  101 atcttaccctaattaatg 118  Q
    | |||||||||| |||||    
T  29906804 accttaccctaactaatg 29906787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 6e-41
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 42120332 - 42120216
Alignment:
Q  3 aaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcat 102  Q
    ||||||||||||| |||||||||||||||| |||| || ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||     
T  42120332 aaaaacatgaacgctgggcgaaatgcttgattcatggtcgtttgacaagtttgaattaccccatttcagaggtaagacaatcgttgtagttggaatgcac 42120233  T
Q  103 cttaccctaattaatga 119  Q
    |||||||||| ||||||    
T  42120232 cttaccctaactaatga 42120216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 9e-40
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 10360084 - 10360201
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    |||||||||||||||||||||||||||||||| |||| |  |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  10360084 ggaaaaacatgaacgttgggcgaaatgcttgagtcatggccgtttggcaagtttgaattaccccattt-tgaggtaagacaattgttgtagttggaatgc 10360182  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  10360183 accttaccctaactaatga 10360201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 9e-40
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 22493593 - 22493475
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||||| |||||||||||| ||| |||| |  ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  22493593 ggaaaaacatgaacgctgggcgaaatgcctgagtcatggccgtttggcaagtttgaattaccccatttcagaagtaagacagttgttgtagttggaatgc 22493494  T
Q  101 atcttaccctaattaatga 119  Q
    |||||||||||| ||||||    
T  22493493 atcttaccctaactaatga 22493475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 5e-29
Query Start/End: Original strand, 3 - 119
Target Start/End: Original strand, 42240985 - 42241101
Alignment:
Q  3 aaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcat 102  Q
    ||||||||||| |  | ||||||||||||| || | |  ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  42240985 aaaaacatgaatgccgagcgaaatgcttgagtcctggccgtttgacaagtttgaattacctcatttcagaggtaagacaattgttgtagttggaatgcac 42241084  T
Q  103 cttaccctaattaatga 119  Q
    |||||||||| ||||||    
T  42241085 cttaccctaactaatga 42241101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 8e-28
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 16582146 - 16582028
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||| |  | ||||||| ||||| || | |  ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  16582146 ggaaaaacatgaatgccgagcgaaatacttgagtcctggccgtttggcaagtttgaattaccccatttcagaggtaagccaattgttgcagttggaatgc 16582047  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  16582046 accttaccctaactaatga 16582028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 5e-26
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 18393672 - 18393553
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattacccc-atttcagaggtaagacaattgttgtagttggaatg 99  Q
    ||||||||||||| |  | ||||||| ||||| || | || ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  18393672 ggaaaaacatgaatgccgagcgaaatacttgagtcctagtcgtttggcaagtttgaattaccccnatttcagaggtaagacaatttttgtagttggaatg 18393573  T
Q  100 catcttaccctaattaatga 119  Q
    || |||||||| | ||||||    
T  18393572 caccttaccctcactaatga 18393553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 32735102 - 32735191
Alignment:
Q  4 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagtt 93  Q
    |||||||||| || ||| ||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32735102 aaaacatgaatgtcgggggaaatgcttgagtcat-gttgtttggcaagtttgaatttaccccatttcagaggtaagacaattgttgtagtt 32735191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 4e-23
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 10359953 - 10359853
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    ||||||||||||| |  |||| |||||||||| |||| ||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||    
T  10359953 ggaaaaacatgaatgcggggcaaaatgcttgagtcat-gttgtttggcaagtttgaatttaccccatt-caaaggtaagacaattgttgtagttggaatg 10359856  T
Q  100 cat 102  Q
    |||    
T  10359855 cat 10359853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 4e-23
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 32734969 - 32734851
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||| |  | ||||||||||||| || | |  ||||||||||||||||||| ||||||| |||||||||||  ||||||||||||||||||    
T  32734969 ggaaaaacatgaatgccgagcgaaatgcttgagtcctggccgtttggcaagtttgaattatcccattttagaggtaagactgttgttgtagttggaatgc 32734870  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||| ||| ||||||    
T  32734869 accttaccttaactaatga 32734851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 22493725 - 22493823
Alignment:
Q  2 gaaaaacatgaacgttgggcgaaatgcttgaatcattgttgt-ttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    |||||||||||| |  ||||||||||||||| |||| ||||| ||||||||||||||||  |||||| || |||||||||||||||||||||||||||||    
T  22493725 gaaaaacatgaatgcggggcgaaatgcttgagtcat-gttgtgttggcaagtttgaattttcccatt-caaaggtaagacaattgttgtagttggaatgc 22493822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 42120465 - 42120564
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||| |  ||| | ||||||||| |||| |||||||||||||||||||||  |||  |||| |||||||||||||||||||||||||||||    
T  42120465 ggaaaaacatgaatgcggggtgcaatgcttgagtcat-gttgtttggcaagtttgaattttccccattcaaaggtaagacaattgttgtagttggaatgc 42120563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 38 - 119
Target Start/End: Complemental strand, 29068012 - 29067933
Alignment:
Q  38 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||| |||||||||||||||||||| || ||| |||||||||||||||| ||||||||| |||||||||| ||||||    
T  29068012 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagctggaatgcaccttaccctaactaatga 29067933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 3936970 - 3937066
Alignment:
Q  20 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || ||||||||||||||||||||||| |||||||||| ||||||    
T  3936970 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaattgttgtagttggaatgcaccttaccctaactaatga 3937066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 17425089 - 17424993
Alignment:
Q  20 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| ||||||| |||||||||||||||||| |||||||||| ||||||    
T  17425089 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aagacaaatgttgtagttggaatgcaccttaccctaactaatga 17424993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 43983156 - 43983060
Alignment:
Q  20 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || ||||||||||||||||||||||| |||||||||| ||||||    
T  43983156 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaattgttgtagttggaatgcaccttaccctaactaatga 43983060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 16582312 - 16582375
Alignment:
Q  38 tgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||||||||||||| | |||||| |||| ||||||||||||||||||||||||||||||    
T  16582312 tgttgtttggcaagtttgaactgacccca-ttcaaaggtaagacaattgttgtagttggaatgca 16582375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 18393805 - 18393898
Alignment:
Q  4 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaat 98  Q
    |||||||||| |  ||| ||||||||||| || | |||||||| |||||||||| |||||||| |||| |||||||||||||||||||||||||||    
T  18393805 aaaacatgaatgccgggggaaatgcttgagtcct-gttgtttgacaagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttggaat 18393898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 16253728 - 16253680
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  16253728 caagtttgaattacctcatttcagag-taagacaattgttgtagttggaa 16253680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 38 - 107
Target Start/End: Complemental strand, 22002117 - 22002050
Alignment:
Q  38 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttac 107  Q
    ||||||||| ||||||||||||||| |||| || ||| |||||||||||||||||||||||||| |||||    
T  22002117 tgttgtttgacaagtttgaattacctcatt-caaagg-aagacaattgttgtagttggaatgcaacttac 22002050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 8557444 - 8557381
Alignment:
Q  38 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||||| ||||||||| | |||||| || ||||||||||||||||||||||||||||||    
T  8557444 tgttgtttggcaggtttgaatttatcccatt-caaaggtaagacaattgttgtagttggaatgca 8557381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 33404502 - 33404558
Alignment:
Q  41 tgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||| |||||||||||||  |||| |||||||||||||||||||||||| ||||||    
T  33404502 tgtttagcaagtttgaatttacccaattcagaggtaagacaattgttgtatttggaa 33404558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 39394213 - 39394095
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaa-tgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaat 98  Q
    ||||||||||||| | || |||||| ||||||| |||| |||||||| || ||||||||| | | |||| || ||||||||||||||||| |||||||||    
T  39394213 ggaaaaacatgaatgctgagcgaaaatgcttgagtcat-gttgtttgacatgtttgaatttatctcatt-caaaggtaagacaattgttgcagttggaat 39394116  T
Q  99 gcatcttaccctaattaatga 119  Q
    ||| |||| ||||| ||||||    
T  39394115 gcaccttatcctaactaatga 39394095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 5420742 - 5420673
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    |||||||||||| ||||||  ||||| |||||||||||||| |||||||||||| |||||||||| ||||||    
T  5420742 caagtttgaattgccccatc-cagag-taagacaattgttgcagttggaatgcaccttaccctaactaatga 5420673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 6977118 - 6977065
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||| |||||    
T  6977118 gtttggcaagtttgaattacccca-ttcagagg-aagacaattgttgtagctggaa 6977065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 18036088 - 18036143
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||| |||||||| || || | ||||||||||||||||||||||||||||||||||    
T  18036088 gtttagcaagtttaaaatatctcatttcagaggtaagacaattgttgtagttggaa 18036143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 3941986 - 3941941
Alignment:
Q  74 gtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||||||||| |||||||||||| |||||||||| ||||||    
T  3941986 gtaagacaattgttgaagttggaatgcaccttaccctaactaatga 3941941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 10364349 - 10364296
Alignment:
Q  44 ttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||||||  |||  |||| ||||||||||||||||||||||||||    
T  10364349 ttggcaagtttgaattttccccattcaaaggtaagacaattgttgtagttggaa 10364296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 16253944 - 16254000
Alignment:
Q  42 gtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||| ||| ||||||||| |||||||||||||  |||||||||||||||||||||||    
T  16253944 gtttagcaggtttgaatttaccccatttcagatataagacaattgttgtagttggaa 16254000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 97
Target Start/End: Original strand, 31991885 - 31991917
Alignment:
Q  65 atttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||||||||||||||||||||||    
T  31991885 atttcagaggtaagacaattgttgtagttggaa 31991917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 10364562 - 10364615
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||||||||||||||||| | ||| |||||||||||||||| |||||    
T  10364562 gtttggcaagtttgaattaccccattt-aaagg-aagacaattgttgtagctggaa 10364615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 17796034 - 17796087
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||||||||||| || |||| ||| ||||||||||||||||||||||    
T  17796034 gtttggcaagtttgaattacctca-ttcaaagg-aagacaattgttgtagttggaa 17796087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 34521608 - 34521661
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||    
T  34521608 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtagctggaa 34521661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 35491917 - 35491864
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||    
T  35491917 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtagctggaa 35491864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 43491732 - 43491679
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||||||||||||| |||| ||| ||| ||||||||||||||||||    
T  43491732 gtttggcaagtttgaattacccca-ttcaaagg-aaggcaattgttgtagttggaa 43491679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 29111437 - 29111370
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttacccta 111  Q
    ||||| ||||||||||||||| |||| || ||| |||| |||||||||||||||||||||  ||||||||    
T  29111437 gtttgacaagtttgaattaccacatt-caaagg-aagataattgttgtagttggaatgcactttacccta 29111370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 29111601 - 29111664
Alignment:
Q  38 tgttgtttggcaagtttgaattaccc-catttcagaggtaagacaattgttgtagttggaatgca 101  Q
    ||||||||||| ||||||||||  || ||||| | |||||||| |||||||||||||||||||||    
T  29111601 tgttgtttggcgagtttgaatttgcctcatttaa-aggtaagataattgttgtagttggaatgca 29111664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 35492128 - 35492179
Alignment:
Q  44 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgg 95  Q
    |||||||||||||||| ||| |||| || ||||||||||||||||||||||||    
T  35492128 ttggcaagtttgaatttaccacatt-caaaggtaagacaattgttgtagttgg 35492179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 35492316 - 35492376
Alignment:
Q  37 ttgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||| |||||||||||||  |||  ||||| ||||||| |||||||| ||||||||    
T  35492316 ttgttgtttagcaagtttgaatttgccccattcagtggtaagataattgttgcagttggaa 35492376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 41498696 - 41498742
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgga 96  Q
    |||||||||||| ||||||| |||||| |||||||||||||||||||||    
T  41498696 caagtttgaattgccccatt-cagagg-aagacaattgttgtagttgga 41498742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 43491944 - 43491995
Alignment:
Q  44 ttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttgg 95  Q
    |||||||||||||| |||||||| |||| |||||| |||||||||||||||||    
T  43491944 ttggcaagtttgaatttacccca-ttcaaaggtaacacaattgttgtagttgg 43491995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 2919289 - 2919342
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||||||||||| || |||| ||| |||||||||||||||| |||||    
T  2919289 gtttggcaagtttgaattaccaca-ttcaaagg-aagacaattgttgtagctggaa 2919342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 99
Target Start/End: Original strand, 3936669 - 3936719
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    |||||||||||| ||||||  ||| |||||||||||||||| ||||||||||    
T  3936669 caagtttgaattgccccatcgcag-ggtaagacaattgttgcagttggaatg 3936719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 97
Target Start/End: Complemental strand, 8557195 - 8557145
Alignment:
Q  47 gcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||| |||||||| ||| || ||||||||||||||||||||||    
T  8557195 gcaagtttgaatttaccccatt-caggggcaagacaattgttgtagttggaa 8557145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 17425258 - 17425339
Alignment:
Q  19 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| ||||||||||| |||||||||||    
T  17425258 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgtggttggaatgca 17425339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 18393951 - 18393902
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    |||||||||||| ||||||  ||||| |||||||||||||||||||||||||    
T  18393951 caagtttgaattgccccatc-cagag-taagacaattgttgtagttggaatg 18393902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 22493873 - 22493824
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    |||||||||||| |||||| | |||| |||||||||||||||||||||||||    
T  22493873 caagtttgaattgccccatct-agag-taagacaattgttgtagttggaatg 22493824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 76 - 119
Target Start/End: Original strand, 39799828 - 39799871
Alignment:
Q  76 aagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    |||||||||||||| |||||||||||  ||||||||| ||||||    
T  39799828 aagacaattgttgtggttggaatgcacattaccctaactaatga 39799871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 1e-44; HSPs: 87)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 1e-44
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 46180168 - 46180286
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||||| |||||||||||||||| |||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46180168 ggaaaaacatgaacgctgggcgaaatgcttgagtcatggccgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 46180267  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  46180268 accttaccctaactaatga 46180286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 45689437 - 45689319
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    |||||||||||||||||||||||||||||||| |||| |  ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  45689437 ggaaaaacatgaacgttgggcgaaatgcttgagtcatggccgtttggcaagtttgaattatccaatttcagaggtaagacaattgttgtagttggaatgc 45689338  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  45689337 accttaccctaactaatga 45689319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 47487925 - 47488043
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||||| |||||||||||||||| |||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47487925 ggaaaaacatgaacgctgggcgaaatgcttgagtcatggccgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 47488024  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||| ||| ||||||    
T  47488025 accttaccataactaatga 47488043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 5e-38
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 35576654 - 35576539
Alignment:
Q  4 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatc 103  Q
    |||||||||||| | |||||||||||||| |||| |  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  35576654 aaaacatgaacgctaggcgaaatgcttgagtcatggccgtttggcaagtttgaattacctcatttcagaggtaagacaattgttgtagttggaatgcacc 35576555  T
Q  104 ttaccctaattaatga 119  Q
    ||||||||| ||||||    
T  35576554 ttaccctaactaatga 35576539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 49262876 - 49262994
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||||| ||||||||||||| || |||| |  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  49262876 ggaaaaacatgaacgctgggcgaaatgctggagtcatggccgtttggcaagtttgaatcaccccatttcagaggtaagacaattgttgtagttggaatgc 49262975  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||| ||| ||||||    
T  49262976 accttaccataactaatga 49262994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 27035206 - 27035324
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||| || | |||||||| |||| || | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27035206 ggaaaaacatgaatgtcgagcgaaatgtttgagtcctggctgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 27035305  T
Q  101 atcttaccctaattaatga 119  Q
    | |||| ||||| ||||||    
T  27035306 accttatcctaactaatga 27035324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 49598779 - 49598897
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||||| ||||| |||| ||||| |||| |  |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  49598779 ggaaaaacatgaacgatgggcaaaatccttgagtcatggccgtttggcaagtttgaattacccgatttcagaggtaagacgattgttgtagttggaatgc 49598878  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  49598879 accttaccctaactaatga 49598897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 50068147 - 50068265
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||||| |||||||||||||||| |||| |  ||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  50068147 ggaaaaacatgaacgatgggcgaaatgcttgagtcatggccgtttgacaagtttgcattaccccatttcagagctaagacaattgttgtagttggaatgc 50068246  T
Q  101 atcttaccctaattaatga 119  Q
    | ||||| |||| ||||||    
T  50068247 accttactctaactaatga 50068265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 39224085 - 39224203
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||| |  | ||||||||||||| || | |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  39224085 ggaaaaacatgaatgccgagcgaaatgcttgagtcctggccgtttggcaagtttgaattaccccatttcagaggtaagagaattgttgtagttggaatgc 39224184  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  39224185 accttaccctaactaatga 39224203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 48568292 - 48568410
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||| | || |||||||||||||||| | |   |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  48568292 ggaaaaacatgaatgctgagcgaaatgcttgaatcctggccatttggcaagtttgagttacccaatttcagaggtaagacaattgttgtagttggaatgc 48568391  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  48568392 accttaccctaactaatga 48568410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 5e-32
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 42571665 - 42571782
Alignment:
Q  2 gaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||||| || | |||||||| |||| || | |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42571665 gaaaaacatgaatgtcgagcgaaatgtttgagtcttggccgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 42571764  T
Q  102 tcttaccctaattaatga 119  Q
     |||||| ||| ||||||    
T  42571765 ccttaccttaagtaatga 42571782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 12791197 - 12791279
Alignment:
Q  37 ttgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||    
T  12791197 ttgtcgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcaccttatcctaactaatga 12791279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 5e-29
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 41874772 - 41874888
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||| ||| | || || |||||||||| || | |  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  41874772 ggaaaaacacgaatgctgagcaaaatgcttgagtcctggccgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagtttgaatgc 41874871  T
Q  101 atcttaccctaattaat 117  Q
    | |||||||||| ||||    
T  41874872 accttaccctaactaat 41874888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 8e-28
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 3658755 - 3658681
Alignment:
Q  37 ttgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttacccta 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  3658755 ttgtcgtttggcaagtttgaattaccccatttcagaggtaagacgattgttgtagttggaatgcaccttacccta 3658681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 43 - 119
Target Start/End: Original strand, 30309762 - 30309838
Alignment:
Q  43 tttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||| ||||||    
T  30309762 tttggcaagtttgaattaccccatttcggaggtaagataattgttgtagttggaatgcaccttaccctaactaatga 30309838  T

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Target: chr1; HSP #16
Raw Score: 55; E-Value: 4e-23
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 27035073 - 27034976
Alignment:
Q  4 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||| |  ||| ||||||||||| |||| ||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||    
T  27035073 aaaacatgaatgccgggtgaaatgcttgagtcat-gttgtttggcaagtttgaatttaccccatttcaaaggtaagacaattattgtagttggaatgca 27034976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 47487794 - 47487695
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    ||||||||||||| |  ||||||||||||||| || | ||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||    
T  47487794 ggaaaaacatgaatgcggggcgaaatgcttgagtcct-gttgtttggcaagtttgaatttaccccatt-caaaggtaagacaattgttgtagttggaatg 47487697  T

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Target: chr1; HSP #18
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 3658921 - 3659018
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    ||||||||||||| || ||||||||||||||| || | ||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||| ||||    
T  3658921 ggaaaaacatgaatgtcgggcgaaatgcttgagtcct-gttgtttggcaagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttgtaatg 3659018  T

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Target: chr1; HSP #19
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 30309587 - 30309491
Alignment:
Q  4 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||| | |||| ||||||||||| |||| ||||||||||| ||||||||| |||||||| || ||||||||||||||||||||||||||||||    
T  30309587 aaaacatgaatgatgggtgaaatgcttgagtcat-gttgtttggcaggtttgaatttaccccatt-cacaggtaagacaattgttgtagttggaatgca 30309491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 51270252 - 51270348
Alignment:
Q  4 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||| | |||| |||||| |||| || ||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||    
T  51270252 aaaacatgaatgctgggtgaaatgtttgagtc-ttgttgtttggcaagtttgaattgacccca-ttcaaaggtaagacaattgttgtagttggaatgca 51270348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 4e-20
Query Start/End: Original strand, 38 - 119
Target Start/End: Complemental strand, 19160596 - 19160517
Alignment:
Q  38 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||| ||||||    
T  19160596 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatga 19160517  T

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Target: chr1; HSP #22
Raw Score: 50; E-Value: 4e-20
Query Start/End: Original strand, 38 - 119
Target Start/End: Complemental strand, 22527786 - 22527707
Alignment:
Q  38 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||| ||||||    
T  22527786 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatga 22527707  T

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Target: chr1; HSP #23
Raw Score: 48; E-Value: 7e-19
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 50068015 - 50067917
Alignment:
Q  2 gaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||||| |  |||| |||||||||| || | |||||||||||||||||||||  |||  |||| ||||||||||||||||||||||||||||||    
T  50068015 gaaaaacatgaatgaggggcaaaatgcttgagtcct-gttgtttggcaagtttgaatttgccccattcaaaggtaagacaattgttgtagttggaatgca 50067917  T

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Target: chr1; HSP #24
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 29707293 - 29707197
Alignment:
Q  4 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||| |  ||| ||||||||||| |||| ||||||| ||||||||||||| |||||||| || ||||||||||||||||||||||||||||||    
T  29707293 aaaacatgaatggcgggtgaaatgcttgagtcat-gttgtttagcaagtttgaattgaccccatt-caaaggtaagacaattgttgtagttggaatgca 29707197  T

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Target: chr1; HSP #25
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 49262751 - 49262655
Alignment:
Q  4 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||| |  ||||||||||||||| || | ||||||||||||||||||||| |||||||| || ||||||||||||| ||||||||||||||||    
T  49262751 aaaacatgaatgcggggcgaaatgcttgagtcct-gttgtttggcaagtttgaatttaccccatt-caaaggtaagacaattcttgtagttggaatgca 49262655  T

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Target: chr1; HSP #26
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 45689568 - 45689667
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    ||||||||||||| |  ||||||||||||||| || | ||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||| ||||||    
T  45689568 ggaaaaacatgaatgcggggcgaaatgcttgagtcct-gttgtttagcaagtttgaatttacccca-ttcaaaggtaagacaattgttgtagtaggaatg 45689665  T

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Target: chr1; HSP #27
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 46180037 - 46179938
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    |||||||| ||||||  ||||||||||||||| |||| |||||||||| |||||||||| ||| |||| || ||||||||||||||||||||||| ||||    
T  46180037 ggaaaaacgtgaacgcggggcgaaatgcttgagtcat-gttgtttggccagtttgaatttacctcatt-caaaggtaagacaattgttgtagttgaaatg 46179940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 4e-17
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 29707426 - 29707540
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggt---aagacaattgttgtagttggaa 97  Q
    ||||||||||||| |  | ||||||||||||| || |    ||||||||||||||||||||||||||||||||||   ||||||||||||| ||||| ||    
T  29707426 ggaaaaacatgaatgccgagcgaaatgcttgagtcctgaccgtttggcaagtttgaattaccccatttcagaggtaagaagacaattgttgcagttgtaa 29707525  T
Q  98 tgcatcttaccctaa 112  Q
    |||| ||| ||||||    
T  29707526 tgcaccttgccctaa 29707540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 12791031 - 12790936
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||| || ||||||||| ||||| || | ||||||||| ||||||||||| |||||||| ||||||||| |||||||||| ||||||||    
T  12791031 ggaaaaacatgaatgtcgggcgaaattcttgagtcct-gttgtttggtaagtttgaatttaccccatt-cagaggtaacacaattgttggagttggaa 12790936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 17697468 - 17697563
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||| || || ||||||||||||||| |||| |||||||||| |||||||||| | |||||| ||| || ||||||||||||||||||||||    
T  17697468 ggaaaaacataaatgtcgggcgaaatgcttgagtcat-gttgtttggcgagtttgaatttatcccatt-caggggcaagacaattgttgtagttggaa 17697563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 18170474 - 18170569
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||| || |||||  |||||||||| |||| || |||||||||||| |||||||| |||||||| ||||||||||| |||||||||||||||||||    
T  18170474 ggaaaagcaagaacgccgggcgaaatgtttgagtc-ttgttgtttggccagtttgaatttacccca-ttcagaggtaacacaattgttgtagttggaa 18170569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 29762129 - 29762227
Alignment:
Q  20 gcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatg 118  Q
    ||||||||||||| || | ||||||||||| ||||||||| | | |||| || ||||||||||||||||| |||||||||||| |||||||||| |||||    
T  29762129 gcgaaatgcttgagtcct-gttgtttggcaggtttgaatttatctcatt-caaaggtaagacaattgttgaagttggaatgcaccttaccctaactaatg 29762226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 72 - 119
Target Start/End: Original strand, 27486649 - 27486696
Alignment:
Q  72 aggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||    
T  27486649 aggtaagacaattgttgtagttggaatgcaccttaccctaactaatga 27486696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 29436290 - 29436173
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    ||||||||||||| |  | ||||||||||||| |||| ||||||||||| ||||||||| |   |||| || |||||||| |||||||| ||||||||||    
T  29436290 ggaaaaacatgaatgccgagcgaaatgcttgagtcat-gttgtttggcaggtttgaatttatttcatt-caaaggtaagaaaattgttgcagttggaatg 29436193  T
Q  100 catcttaccctaattaatga 119  Q
    || |||||||||| ||||||    
T  29436192 caccttaccctaactaatga 29436173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 48 - 119
Target Start/End: Original strand, 39856843 - 39856912
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    |||||||||||| ||||||  ||||| ||||||||||||||||||||||||||| |||||||||| ||||||    
T  39856843 caagtttgaattgccccatc-cagag-taagacaattgttgtagttggaatgcaccttaccctaactaatga 39856912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 41874622 - 41874544
Alignment:
Q  22 gaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    ||||||||||| |||| ||||||| |||||||||||||  | |  |||| ||||||||||||||||||||||||||||||    
T  41874622 gaaatgcttgagtcat-gttgtttagcaagtttgaatttgctccattcaaaggtaagacaattgttgtagttggaatgca 41874544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 44337208 - 44337325
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    ||||||||||||| || | ||||||||||||| || | ||||||||||| ||||||||| | | |||| || ||||||||||||||||| | ||| ||||    
T  44337208 ggaaaaacatgaatgtcgagcgaaatgcttgagtcct-gttgtttggcaggtttgaatttatctcatt-caaaggtaagacaattgttgcatttgaaatg 44337305  T
Q  100 catcttaccctaattaatga 119  Q
    || |||||||||| ||||||    
T  44337306 caccttaccctaactaatga 44337325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 51270119 - 51270002
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    ||||||||||||| |  | ||||||||||||| || | ||||||| ||| ||||||||| | | |||| || ||||||||||||||||| ||||||||||    
T  51270119 ggaaaaacatgaatgccgagcgaaatgcttgagtcct-gttgtttagcaggtttgaatttatctcatt-caaaggtaagacaattgttgaagttggaatg 51270022  T
Q  100 catcttaccctaattaatga 119  Q
    || |||||||||| ||||||    
T  51270021 caccttaccctaactaatga 51270002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 16081766 - 16081827
Alignment:
Q  37 ttgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||| |||| |||||||| ||||||||| |||||||||| |||||||||||||||||    
T  16081766 ttgttgtttcgcaaatttgaatttaccccattttagaggtaagataattgttgtagttggaa 16081827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 18170668 - 18170728
Alignment:
Q  37 ttgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||| |||||||| |||||||| ||||||||||| |||||||||||||||||||    
T  18170668 ttgttgtttggccagtttgaatttacccca-ttcagaggtaacacaattgttgtagttggaa 18170728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 21484574 - 21484641
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttacccta 111  Q
    |||||||||||||||||||||  ||| || ||| |||||||||||||||||||||||||| |||||||||    
T  21484574 gtttggcaagtttgaattaccatatt-caaagg-aagacaattgttgtagttggaatgcaccttacccta 21484641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 39223952 - 39223857
Alignment:
Q  4 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||| |  ||| ||||||||||| |||| |||||||| || |||||||||  |||||| || | ||||||||||||||||||||||||||||    
T  39223952 aaaacatgaatgccgggtgaaatgcttgagtcat-gttgtttgacaggtttgaatttacccatt-caaatgtaagacaattgttgtagttggaatgca 39223857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 48568160 - 48568064
Alignment:
Q  4 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||| |  ||| ||||||||||| |||| |||||||  ||||||||||||  ||   |||| ||||||||||||||||||||||||||||||    
T  48568160 aaaacatgaatgccgggtgaaatgcttgattcat-gttgtttcacaagtttgaatttgcctcattcaaaggtaagacaattgttgtagttggaatgca 48568064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 49598646 - 49598546
Alignment:
Q  3 aaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaa---ttgttgtagttggaat 98  Q
    |||||||| ||||  ||||||||||||||| |||| |||||||||| |||||||||| ||| |||| || |||||||||||   ||||||||||||||||    
T  49598646 aaaaacataaacgcggggcgaaatgcttgagtcat-gttgtttggccagtttgaatttacctcatt-caaaggtaagacaacaattgttgtagttggaat 49598549  T
Q  99 gca 101  Q
    |||    
T  49598548 gca 49598546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 38044671 - 38044612
Alignment:
Q  38 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||| |||||||||||||  |||| ||||| ||||||| |||||||||||||||||    
T  38044671 tgttgtttagcaagtttgaatttgcccaattcagtggtaagataattgttgtagttggaa 38044612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 119
Target Start/End: Complemental strand, 49427630 - 49427587
Alignment:
Q  76 aagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    |||||||||||||||||||||||||| |||||||||| ||||||    
T  49427630 aagacaattgttgtagttggaatgcaccttaccctaactaatga 49427587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 48 - 90
Target Start/End: Original strand, 16098022 - 16098063
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgta 90  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  16098022 caagtttgaattaccccatttcaga-gtaagacaattgttgta 16098063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 18842937 - 18842994
Alignment:
Q  38 tgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttgg 95  Q
    |||||||| ||||||||||| |||||||| ||||| |||||||||||||||||||||||    
T  18842937 tgttgtttagcaagtttgaatttacccca-ttcaggggtaagacaattgttgtagttgg 18842994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 24270292 - 24270344
Alignment:
Q  43 tttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||    
T  24270292 tttggcaagtttgaattacccca-ttcagagg-aagacaattgttgtagctggaa 24270344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 94
Target Start/End: Complemental strand, 42571496 - 42571442
Alignment:
Q  40 ttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttg 94  Q
    ||||||||||||||||||||  |||| |||| |||||| ||||||||||||||||    
T  42571496 ttgtttggcaagtttgaatttacccaattcaaaggtaacacaattgttgtagttg 42571442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 44337075 - 44336979
Alignment:
Q  4 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||| |  ||||||||||| ||| |||| ||||||||||| ||||||||| | | |||| || ||||||||||||||||| ||||||||||||    
T  44337075 aaaacatgaatgccgggcgaaatgcgtgactcat-gttgtttggcaggtttgaatttatctcatt-caaaggtaagacaattgttgcagttggaatgca 44336979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 119
Target Start/End: Complemental strand, 44597982 - 44597901
Alignment:
Q  38 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    |||||||||||| ||||||||| | | |||| || ||||||||||||||||| ||||||||||||  ||||||||| ||||||    
T  44597982 tgttgtttggcaggtttgaatttatctcatt-caaaggtaagacaattgttgaagttggaatgcactttaccctaactaatga 44597901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 24363531 - 24363475
Alignment:
Q  41 tgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||| ||||||||||||| |||||||| ||||| |||||||||||||||||||||||    
T  24363531 tgtttagcaagtttgaatttaccccatt-cagagataagacaattgttgtagttggaa 24363475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 21484499 - 21484436
Alignment:
Q  38 tgttgtttggcaagtttgaattaccc-catttcagaggtaagacaattgttgtagttggaatgca 101  Q
    ||||||||||||| ||||||||  || ||||| | ||||||||||||||||||||||||||||||    
T  21484499 tgttgtttggcaattttgaatttgcctcatttaa-aggtaagacaattgttgtagttggaatgca 21484436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 119
Target Start/End: Original strand, 13635260 - 13635303
Alignment:
Q  76 aagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    |||||||||||||| ||||||||||| |||||||||| ||||||    
T  13635260 aagacaattgttgtggttggaatgcaccttaccctaactaatga 13635303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 13973202 - 13973149
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||    
T  13973202 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtagctggaa 13973149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 14173686 - 14173739
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||    
T  14173686 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtagctggaa 14173739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 14772462 - 14772517
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||| |||||||||||||| | ||||| |||||||| |||||| ||||||||||||    
T  14772462 gtttagcaagtttgaattatctcattttagaggtaacacaattcttgtagttggaa 14772517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 118
Target Start/End: Complemental strand, 48226799 - 48226760
Alignment:
Q  79 acaattgttgtagttggaatgcatcttaccctaattaatg 118  Q
    ||||||||||||||||||||||| |||||||||| |||||    
T  48226799 acaattgttgtagttggaatgcaccttaccctaactaatg 48226760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 49396982 - 49396929
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||    
T  49396982 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtagctggaa 49396929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 17686074 - 17686021
Alignment:
Q  44 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||||| ||| |||| ||||||||| |||||||||||||||||||    
T  17686074 ttggcaagtttgaatttacctcatt-cagaggtaacacaattgttgtagttggaa 17686021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 29436423 - 29436519
Alignment:
Q  4 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||| || | ||||||||||||| || | ||| ||||||| ||||||||| | | |||| || |||||| |||||||||||||||||||||||    
T  29436423 aaaacatgaatgtcgagcgaaatgcttgagtcct-gttatttggcaggtttgaatttatctcatt-caaaggtaaaacaattgttgtagttggaatgca 29436519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 37778569 - 37778622
Alignment:
Q  44 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||||| ||| |||| ||||||||| |||||||||||||||||||    
T  37778569 ttggcaagtttgaatttaccacatt-cagaggtaacacaattgttgtagttggaa 37778622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 12790749 - 12790693
Alignment:
Q  41 tgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||| ||||||||||| ||||||||||| |||||||||| |||||||| ||||||||    
T  12790749 tgtttagcaagtttgaatttaccccattt-agaggtaagataattgttgcagttggaa 12790693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 13283973 - 13283926
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||||||||| || ||| ||||||||||||||||||||||    
T  13283973 caagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaa 13283926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 13973524 - 13973481
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagtt 93  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||    
T  13973524 caagtttgaattacccca-ttcagagg-aagacaattgttgtagtt 13973481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 17685835 - 17685779
Alignment:
Q  41 tgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||| ||||||||||||| | |||||| ||||||||||| |||||||||||||||||    
T  17685835 tgtttagcaagtttgaatttatcccatt-cagaggtaagataattgttgtagttggaa 17685779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 37778357 - 37778310
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtag 91  Q
    |||||||||||||||||||||||| |||||||| |||| |||||||||||    
T  37778357 gtttggcaagtttgaattacccca-ttcagagg-aagaaaattgttgtag 37778310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 38046362 - 38046409
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtag 91  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  38046362 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtag 38046409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 41780971 - 41780924
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtag 91  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  41780971 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtag 41780924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 6436262 - 6436313
Alignment:
Q  44 ttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttgg 95  Q
    |||||||||||||| |||||||| |||| |||||| |||||||||||||||||    
T  6436262 ttggcaagtttgaatttacccca-ttcaaaggtaaaacaattgttgtagttgg 6436313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 12790879 - 12790925
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgga 96  Q
    ||||||||||||||||||||| ||||| ||||||||||||| |||||||    
T  12790879 caagtttgaattaccccattt-agagg-aagacaattgttgcagttgga 12790925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 13284188 - 13284244
Alignment:
Q  41 tgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||| |||||||||||||  |||  ||||  |||||||||||||||||||||||||    
T  13284188 tgtttagcaagtttgaatttgccccattcaagggtaagacaattgttgtagttggaa 13284244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 23343130 - 23343181
Alignment:
Q  44 ttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttgg 95  Q
    |||||||||||||| |||||||| |||| |||||| |||||||||||||||||    
T  23343130 ttggcaagtttgaatttacccca-ttcaaaggtaacacaattgttgtagttgg 23343181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 24269842 - 24269786
Alignment:
Q  41 tgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||| |||||||||||||  |||| |||| |||||||| |||||||| ||||||||    
T  24269842 tgtttagcaagtttgaatttgcccaattcaaaggtaagataattgttgaagttggaa 24269786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 38044798 - 38044844
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgga 96  Q
    |||||||||||||||||| |||||||| ||||||||||||| |||||||    
T  38044798 caagtttgaattacccca-ttcagagg-aagacaattgttgcagttgga 38044844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 38044908 - 38044857
Alignment:
Q  44 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgg 95  Q
    |||||||||||||||| |||||||| || |||||| |||||||||||||||||    
T  38044908 ttggcaagtttgaatttaccccatt-caaaggtaacacaattgttgtagttgg 38044857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 40532892 - 40532938
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgga 96  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||||||||    
T  40532892 caagtttgaattacctcattt-agagg-aagacaattgttgtagttgga 40532938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 6436050 - 6435997
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||||||||||| || |||| ||| |||||||||||||||| |||||    
T  6436050 gtttggcaagtttgaattacctca-ttcaaagg-aagacaattgttgtagctggaa 6435997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 19160782 - 19160863
Alignment:
Q  19 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| ||||||||||| |||||||||||    
T  19160782 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgtggttggaatgca 19160863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 22527972 - 22528053
Alignment:
Q  19 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||| ||||| || ||||||||| ||| ||||||||| | | |||| || |||||| |||||||||||||||||||||||    
T  22527972 ggcgaaattcttgagtc-ttgttgttttgcaggtttgaatttatctcatt-caaaggtaacacaattgttgtagttggaatgca 22528053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 23342919 - 23342866
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||||||||| |||| |||| ||| |||||||||||||||| |||||    
T  23342919 gtttggcaagtttgaatta-cccaattcaaagg-aagacaattgttgtagctggaa 23342866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 36909839 - 36909786
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||||||||||||| |||| ||| ||||||| |||||||| |||||    
T  36909839 gtttggcaagtttgaattacccca-ttcaaagg-aagacaactgttgtagctggaa 36909786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 41781267 - 41781221
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgg 95  Q
    ||||||||||||||||| || || |||||| |||||||||||||||||    
T  41781267 caagtttgaattaccccgtt-caaaggtaacacaattgttgtagttgg 41781221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 45689717 - 45689668
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    |||||||||||| |||||| | |||| |||||||||||||||||||||||||    
T  45689717 caagtttgaattgccccatct-agag-taagacaattgttgtagttggaatg 45689668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 99
Target Start/End: Original strand, 46179888 - 46179937
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    |||||||||||| ||||||  ||||| |||||||||||||||||||||||||    
T  46179888 caagtttgaattgccccatc-cagag-taagacaattgttgtagttggaatg 46179937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 99
Target Start/End: Original strand, 50067867 - 50067916
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    |||||||||||| ||||||  ||||| |||||||||||||||||||||||||    
T  50067867 caagtttgaattgccccatc-cagag-taagacaattgttgtagttggaatg 50067916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 9e-43; HSPs: 83)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 9e-43
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 45939844 - 45939725
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaatt-gttgtagttggaatg 99  Q
    ||||||||||||||||||||| |||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  45939844 ggaaaaacatgaacgttgggcaaaatgcttgagtcatggtcgtttggcaagtttgaattaccccatttcagaggtaagacaattagttgtagttggaatg 45939745  T
Q  100 catcttaccctaattaatga 119  Q
    || |||||||||| ||||||    
T  45939744 caccttaccctaactaatga 45939725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 27759645 - 27759527
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||||| |||||||||||||||| |||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27759645 ggaaaaacatgaacgctgggcgaaatgcttgagtcatagccgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttgaaatgc 27759546  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  27759545 accttaccctaactaatga 27759527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 31824518 - 31824636
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    |||||||||||||||||||||||||||||||| | || |  ||||||||||||| |||||||| |||||| | |||||||||||||||||||||||||||    
T  31824518 ggaaaaacatgaacgttgggcgaaatgcttgagtaatggccgtttggcaagtttaaattaccctatttcaaatgtaagacaattgttgtagttggaatgc 31824617  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  31824618 accttaccctaactaatga 31824636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 51027656 - 51027774
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||| | |||||||||||||||| |||| |  | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  51027656 ggaaaaacatgaatgctgggcgaaatgcttgagtcatggccgcttggcaagtttgaattaccccatttcagaggtacgacaattgttgtagttggagtgc 51027755  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  51027756 accttaccctaactaatga 51027774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 21711848 - 21711730
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||| |  | ||||||||||||| || | |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21711848 ggaaaaacatgaatgccgagcgaaatgcttgagtcctggccgtttggcaagtttgaattaccccatttcagaggtaagagaattgttgtagttggaatgc 21711749  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  21711748 accttaccctaactaatga 21711730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 25762916 - 25762798
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||| | | |||||||||||||| |||| |  ||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  25762916 ggaaaaacatgaatgcttggcgaaatgcttgagtcatggccgtttgacaagtttgaattaccccattttagaggtaagacaattgttgcagttggaatgc 25762817  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  25762816 accttaccctaactaatga 25762798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 49064295 - 49064179
Alignment:
Q  3 aaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcat 102  Q
    ||||||||||| |  | ||||||||||||| || | |  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  49064295 aaaaacatgaatgccgagcgaaatgcttgagtcctggccgtttggcaagtttgaattaccccatttaagaggtaagacaattgttgtagttggaatgcac 49064196  T
Q  103 cttaccctaattaatga 119  Q
    |||||||||| ||||||    
T  49064195 cttaccctaactaatga 49064179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 21 - 119
Target Start/End: Original strand, 51428101 - 51428199
Alignment:
Q  21 cgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    |||||||||||| || | |  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  51428101 cgaaatgcttgagtcctggccgtttgccaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcaccttaccctaactaatga 51428199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 5e-29
Query Start/End: Original strand, 3 - 119
Target Start/End: Original strand, 46816416 - 46816532
Alignment:
Q  3 aaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcat 102  Q
    ||||||||||| |  | ||||||||||||| || | |  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||     
T  46816416 aaaaacatgaatgccgagcgaaatgcttgagtcttggccgtttggcaagtttgaattaccccatctcagaggtaagacaattgttgtagttggaatgcac 46816515  T
Q  103 cttaccctaattaatga 119  Q
    ||| |||||| ||||||    
T  46816516 cttgccctaactaatga 46816532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 8e-28
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 1226441 - 1226359
Alignment:
Q  37 ttgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    |||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  1226441 ttgtcgtttggcaagtttgaattaccccatttatgaggtaagacaattgttgtagttggaatgcaccttaccctaactaatga 1226359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 8e-28
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 33163433 - 33163551
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||| || | |||||||| |||| || | |  |||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||    
T  33163433 ggaaaaacatgaatgtcgagcgaaatgtttgagtcctggccgtttggcaagtttgaaataccccatttaagaggcaagacaattgttgtagttggaatgc 33163532  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  33163533 accttaccctaactaatga 33163551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 8e-28
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 37866725 - 37866607
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||| |  | ||||||||||||| || | |  ||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||    
T  37866725 ggaaaaacatgaatgccgagcgaaatgcttgagtcctggccgtttggcaagtttgaattaccccatttcagaggtaagacgactgttgcagttggaatgc 37866626  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  37866625 accttaccctaactaatga 37866607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 3e-27
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 20901598 - 20901675
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  20901598 gtttggaaagtttgaattacctcatttcagaggtaagacaattgttgtagttggaatgcaccttaccctaactaatga 20901675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 14330631 - 14330701
Alignment:
Q  49 aagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||    
T  14330631 aagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcaccttaccttaactaatga 14330701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 242346 - 242411
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttac 107  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||    
T  242346 gtttggcaagtttgaattaccctatttcagaggtaagacaattgttatagttggaatgcaccttac 242411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 20901434 - 20901335
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    ||||||||||||| |  || |||||||||||| |||| ||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||    
T  20901434 ggaaaaacatgaatgcgggacgaaatgcttgagtcat-gttgtttggcaagtttgaatttaccccatt-caaaggtaagacaattgttgtagttggaatg 20901337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 4e-20
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 27759776 - 27759875
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    |||||||||||||||  ||||||||||||||| || | |||||||||| |||||||| |||||||| |||| |||||||||||||| |||||||||||||    
T  27759776 ggaaaaacatgaacgcggggcgaaatgcttgagtcct-gttgtttggccagtttgaatttacccca-ttcaaaggtaagacaattgctgtagttggaatg 27759873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 7e-19
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 55797039 - 55796943
Alignment:
Q  20 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||||||| || | |||||||| ||||||||||||| |||||| || ||| |||||||||||||||||||||||||| |||||||||| ||||||    
T  55797039 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattagcccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatga 55796943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 38 - 119
Target Start/End: Original strand, 21017105 - 21017184
Alignment:
Q  38 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||| ||||||||||||||| |||| || ||| |||||||||||||||||||||||||| |||||||||| ||||||    
T  21017105 tgttgtttgacaagtttgaattacctcatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatga 21017184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 38132875 - 38132779
Alignment:
Q  4 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||| |  ||| ||||||||||| |||| |||||||||||||||||||||  |||  |||| ||||||||||||||||||||||| ||||||    
T  38132875 aaaacatgaatgcggggtgaaatgcttgagtcat-gttgtttggcaagtttgaatttgccccattcaaaggtaagacaattgttgtagttgaaatgca 38132779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 38 - 119
Target Start/End: Original strand, 40353701 - 40353780
Alignment:
Q  38 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||| || ||||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||| ||||||    
T  40353701 tgttgtttgacaggtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatga 40353780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 4e-17
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 17211773 - 17211829
Alignment:
Q  38 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagtt 93  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17211773 tgttgtttagcaagtttgaatttaccccatttcagaggtaagacaattgttgtagtt 17211829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 4e-17
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 51427948 - 51427858
Alignment:
Q  4 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgg 95  Q
    |||||||||| || ||||||||||||||| || | ||||||||||||||||||||| |||||||| || |||||| |||||||||||||||||    
T  51427948 aaaacatgaatgtcgggcgaaatgcttgagtcct-gttgtttggcaagtttgaatttaccccatt-caaaggtaacacaattgttgtagttgg 51427858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 6e-16
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 21711981 - 21712077
Alignment:
Q  4 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||| || ||| ||||||||||| | | |||||||||||| ||||||||| ||| |||| || ||||||||||||||||||||||||||||||    
T  21711981 aaaacatgaatgtcgggtgaaatgcttgagt-actgttgtttggcacgtttgaatttacctcatt-caaaggtaagacaattgttgtagttggaatgca 21712077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 6e-16
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 39589379 - 39589475
Alignment:
Q  4 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||| || | | |||||| |||| || ||||||||||||||||||||||| |||||| |||| ||||||||||||||||| ||||||||||||    
T  39589379 aaaacatgaatgtcgtgtgaaatgtttgagtc-ttgttgtttggcaagtttgaattgacccca-ttcaaaggtaagacaattgttgaagttggaatgca 39589475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 18412864 - 18412816
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18412864 caagtttgaattaccccatttcaga-gtaagacaattgttgtagttggaa 18412816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 25763047 - 25763146
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    ||||||||||||| |  ||||||||||||||| || |||||||||| ||||||||| || ||||||||  | ||||||||||||||||| ||||||||||    
T  25763047 ggaaaaacatgaatgcggggcgaaatgcttgagtc-ttgttgtttgacaagtttgactttaccccattcga-aggtaagacaattgttggagttggaatg 25763144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 45939974 - 45940073
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    ||||||||||||| |  ||||||||||||||| || | |||||||||||||||||| || ||| ||||  | ||||||||||||||||||||||||||||    
T  45939974 ggaaaaacatgaatgcggggcgaaatgcttgagtcct-gttgtttggcaagtttgactttacctcattcga-aggtaagacaattgttgtagttggaatg 45940071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 14330453 - 14330358
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||| || ||||||||||||||| || |  ||||||| | ||||||||||| ||   |||| ||||||||||||||||||||||||||    
T  14330453 ggaaaaacatgaatgtcgggcgaaatgcttgagtccta-ttgtttgaccagtttgaattaacctcattcaaaggtaagacaattgttgtagttggaa 14330358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 6177226 - 6177322
Alignment:
Q  20 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || |||| |||||||||||||||||| |||||||||| ||||||    
T  6177226 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaaatgttgtagttggaatgcaccttaccctaactaatga 6177322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 9489995 - 9489878
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    ||||||||||||| || | | ||||||||||| || | ||||||||||| ||||||||| | | |||| || ||||||||||||||||| ||||||||||    
T  9489995 ggaaaaacatgaatgtcgagtgaaatgcttgagtcct-gttgtttggcaggtttgaatttatctcatt-caaaggtaagacaattgttgcagttggaatg 9489898  T
Q  100 catcttaccctaattaatga 119  Q
    ||  ||||||||| ||||||    
T  9489897 cactttaccctaactaatga 9489878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 31324450 - 31324395
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||| |||||||||||||| | ||||||| ||||||||||||||||||||||||||    
T  31324450 gtttagcaagtttgaattatctcatttcaaaggtaagacaattgttgtagttggaa 31324395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 41794473 - 41794569
Alignment:
Q  20 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || |||| |||||||||||||||||| |||||||||| ||||||    
T  41794473 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaaatgttgtagttggaatgcaccttaccctaactaatga 41794569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 43889428 - 43889481
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  43889428 gtttggcaagtttgaattaccccattt-agagg-aagacaattgttgtagttggaa 43889481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 49095041 - 49094945
Alignment:
Q  20 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || |||| |||||||||||||||||| |||||||||| ||||||    
T  49095041 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaaatgttgtagttggaatgcaccttaccctaactaatga 49094945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 56139206 - 56139110
Alignment:
Q  20 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || |||| |||||||||||||||||| |||||||||| ||||||    
T  56139206 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaaatgttgtagttggaatgcaccttaccctaactaatga 56139110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 17211536 - 17211488
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  17211536 caagtttgaattacctcatttcagag-taagacaattgttgtagttggaa 17211488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 18413073 - 18413134
Alignment:
Q  37 ttgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||| ||||||||||||| |||  ||||||||||||||| |||||||||||||||||    
T  18413073 ttgttgtttagcaagtttgaatttacctaatttcagaggtaagataattgttgtagttggaa 18413134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 32937834 - 32937901
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttacccta 111  Q
    ||||| ||||||||||||||| |||| || ||| |||||||||||||||||||||||||| |||||||||    
T  32937834 gtttgacaagtttgaattacctcatt-caaagg-aagacaattgttgtagttggaatgcaccttacccta 32937901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 49817363 - 49817307
Alignment:
Q  41 tgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||    
T  49817363 tgtttggcaagtttgaatttaccccatt-caggggtaagacaattgttgtagttggaa 49817307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 37866891 - 37866954
Alignment:
Q  38 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    ||||||||| |||||||||||| |||||| |||| ||||||||||||||||| ||||||||||||    
T  37866891 tgttgtttgacaagtttgaattgacccca-ttcaaaggtaagacaattgttgcagttggaatgca 37866954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 46816262 - 46816184
Alignment:
Q  22 gaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    ||||||||||| || ||||||||| ||||||||||||| ||| |||| || |||||||||||||||||||||| |||||||    
T  46816262 gaaatgcttgagtc-ttgttgtttcgcaagtttgaatttacctcatt-caaaggtaagacaattgttgtagttagaatgca 46816184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 1043066 - 1042949
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    ||||||||||||| |  | ||||||||||||| |||| ||||||||||   |||||||| | | |||| || ||||||||||||||||| ||||||||||    
T  1043066 ggaaaaacatgaatgccgagcgaaatgcttgagtcat-gttgtttggccgatttgaatttatctcatt-caaaggtaagacaattgttgcagttggaatg 1042969  T
Q  100 catcttaccctaattaatga 119  Q
     | |||||||||| ||||||    
T  1042968 taccttaccctaactaatga 1042949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 21169729 - 21169676
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||    
T  21169729 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtagttggaa 21169676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 119
Target Start/End: Complemental strand, 28082481 - 28082438
Alignment:
Q  76 aagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    |||||||||||||||||||||||||| |||||||||| ||||||    
T  28082481 aagacaattgttgtagttggaatgcaccttaccctaactaatga 28082438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 39589246 - 39589129
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    ||||||||||||| |  | | ||||||||||| || | ||||||||||| ||||||||| | | |||| || ||||||||||||||||| ||||||||||    
T  39589246 ggaaaaacatgaatgccgagtgaaatgcttgagtcct-gttgtttggcaggtttgaatttatctcatt-caaaggtaagacaattgttgaagttggaatg 39589149  T
Q  100 catcttaccctaattaatga 119  Q
    || ||||||| || ||||||    
T  39589148 caccttaccccaactaatga 39589129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 242194 - 242105
Alignment:
Q  2 gaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttg-aattaccccatttcagaggtaagacaattgttgtagtt 93  Q
    ||||||||| || || || | |||||||||| |||| ||||||||||||||||| |||||||||  |||| |||||| |||||||||||||||    
T  242194 gaaaaacataaatgtcggacaaaatgcttgagtcat-gttgtttggcaagtttgaaattacccc--ttcaaaggtaacacaattgttgtagtt 242105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 111
Target Start/End: Original strand, 20778796 - 20778868
Alignment:
Q  38 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttacccta 111  Q
    ||||||||||||||||||||||  ||   |||| ||| |||||||||||||| ||||||||||| |||||||||    
T  20778796 tgttgtttggcaagtttgaatttgcctcattcaaagg-aagacaattgttgtggttggaatgcaccttacccta 20778868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 21411842 - 21411879
Alignment:
Q  56 aattaccccatttcagaggtaagacaattgttgtagtt 93  Q
    |||||||||||||||||||||||| |||||||||||||    
T  21411842 aattaccccatttcagaggtaagataattgttgtagtt 21411879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 42886753 - 42886809
Alignment:
Q  41 tgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||||||| |||||||| ||||||||||| |||||||||| ||||||||    
T  42886753 tgtttggcaagtttgaatttacccca-ttcagaggtaacacaattgttggagttggaa 42886809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 26591632 - 26591581
Alignment:
Q  44 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgg 95  Q
    |||||||||||||||| |||||||| || ||||||||||||||||||||||||    
T  26591632 ttggcaagtttgaatttaccccatt-caaaggtaagacaattgttgtagttgg 26591581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 49423364 - 49423410
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgga 96  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||    
T  49423364 caagtttgaattaccccatt-cagagg-aagacaattgttgtagttgga 49423410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 93
Target Start/End: Complemental strand, 21411601 - 21411566
Alignment:
Q  58 ttaccccatttcagaggtaagacaattgttgtagtt 93  Q
    |||||||||||||||||||||| |||||||||||||    
T  21411601 ttaccccatttcagaggtaagataattgttgtagtt 21411566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 36776448 - 36776501
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||    
T  36776448 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtagctggaa 36776501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 44560109 - 44560162
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||    
T  44560109 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtagctggaa 44560162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 56139375 - 56139456
Alignment:
Q  19 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| |||||||||||||||||||||||    
T  56139375 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgtagttggaatgca 56139456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 67 - 101
Target Start/End: Original strand, 885320 - 885354
Alignment:
Q  67 ttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||| ||||||||||||||||||||||||||||||    
T  885320 ttcaaaggtaagacaattgttgtagttggaatgca 885354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 22437189 - 22437142
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtag 91  Q
    |||||||||||||||||||||||||||  || | ||||||||||||||||    
T  22437189 gtttggcaagtttgaattaccccattt--gaaggaagacaattgttgtag 22437142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 49064431 - 49064523
Alignment:
Q  4 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||| || ||| |||| |||||| || | ||||||||||||||||||||| | | |||| || |||||| |||||||||||||||||||    
T  49064431 aaaacatgaatgtcgggtgaaacgcttgagtcct-gttgtttggcaagtttgaatttatctcatt-caaaggtaacacaattgttgtagttggaa 49064523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 51027525 - 51027437
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgta 90  Q
    ||||||| ||||| |  ||| ||||||||||| || | ||||||| ||||||||||||| |||||||| || |||||||||||||||||||    
T  51027525 ggaaaaatatgaatgcggggtgaaatgcttgagtcct-gttgttttgcaagtttgaatttaccccatt-caaaggtaagacaattgttgta 51027437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 13855022 - 13855075
Alignment:
Q  38 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgta 90  Q
    ||||||||  |||||||||||| | || ||||||||||||||||||||||||||    
T  13855022 tgttgtttaacaagtttgaatttatccaatttcagaggtaagacaattgttgta 13855075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 24607027 - 24606972
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    |||||| |||||||||||||| |||| || ||| ||||||||||||||||||||||||    
T  24607027 gtttggaaagtttgaattacctcatt-caaagg-aagacaattgttgtagttggaatg 24606972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 24607211 - 24607271
Alignment:
Q  37 ttgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||||||||||| ||||| || |||| |||||||| ||||||| |||||||||    
T  24607211 ttgttgtttggcaagtttgaatttacctca-ttcaaaggtaagataattgttttagttggaa 24607271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 31324703 - 31324756
Alignment:
Q  38 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgta 90  Q
    |||| ||| ||||||||||||| | |||||||||||||||| ||||||||||||    
T  31324703 tgttatttagcaagtttgaatttatcccatttcagaggtaacacaattgttgta 31324756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 94
Target Start/End: Original strand, 49817572 - 49817623
Alignment:
Q  41 tgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttg 94  Q
    ||||||||||||||||||||||||||| || | | |||||||||||||||||||    
T  49817572 tgtttggcaagtttgaattaccccatt-caaatg-aagacaattgttgtagttg 49817623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 2773609 - 2773563
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgga 96  Q
    |||||||||||||||||| |||||||| ||||||||||||| |||||||    
T  2773609 caagtttgaattacccca-ttcagagg-aagacaattgttgcagttgga 2773563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 93
Target Start/End: Original strand, 9717840 - 9717868
Alignment:
Q  65 atttcagaggtaagacaattgttgtagtt 93  Q
    |||||||||||||||||||||||||||||    
T  9717840 atttcagaggtaagacaattgttgtagtt 9717868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 22437401 - 22437452
Alignment:
Q  44 ttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttgg 95  Q
    |||||||||||||| |||||||| |||| |||||| |||||||||||||||||    
T  22437401 ttggcaagtttgaatttacccca-ttcaaaggtaacacaattgttgtagttgg 22437452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 31824387 - 31824305
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaatt 84  Q
    |||||||||||||||  ||||||||||||||| ||  |||| |||||| |||||||| ||||| || |||| |||||||||||||    
T  31824387 ggaaaaacatgaacgcggggcgaaatgcttgagtc-ctgttatttggccagtttgaatttacctca-ttcaaaggtaagacaatt 31824305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 34529403 - 34529449
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgga 96  Q
    |||||||||||| ||||||| |||||| |||||||||||||||||||||    
T  34529403 caagtttgaattgccccatt-cagagg-aagacaattgttgtagttgga 34529449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 49791653 - 49791602
Alignment:
Q  44 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgg 95  Q
    |||||||||||||||| |||||||| || ||||||| ||||||||||||||||    
T  49791653 ttggcaagtttgaatttaccccatt-caaaggtaagccaattgttgtagttgg 49791602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 957384 - 957437
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||| |||||||||| |||| ||| |||||||||||||||| |||||    
T  957384 gtttggcaagtttcaattacccca-ttcaaagg-aagacaattgttgtagctggaa 957437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 6177057 - 6176976
Alignment:
Q  19 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| ||||||||||| |||||||||||    
T  6177057 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgtggttggaatgca 6176976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 97
Target Start/End: Complemental strand, 17292214 - 17292183
Alignment:
Q  66 tttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||| |||||||||||||||||||    
T  17292214 tttcagaggtaaaacaattgttgtagttggaa 17292183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 21016919 - 21016838
Alignment:
Q  19 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| ||||||||||| |||||||||||    
T  21016919 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgtggttggaatgca 21016838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 101
Target Start/End: Original strand, 28082690 - 28082783
Alignment:
Q  7 acatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaat-taccccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    ||||||| || ||| ||||||||||| || | |||||||| || |||||||| || | |||| || ||||||||||||||||| ||||||||||||    
T  28082690 acatgaatgtcgggtgaaatgcttgagtcct-gttgtttgacaggtttgaatctatctcatt-caaaggtaagacaattgttggagttggaatgca 28082783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 32937648 - 32937585
Alignment:
Q  38 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    ||||||||||||||||||||||  ||   ||||  ||||||| |||||||||||||||| ||||    
T  32937648 tgttgtttggcaagtttgaatttgcctcattcaacggtaagataattgttgtagttggagtgca 32937585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 34153215 - 34153268
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||||||||||||| |||| ||| ||||||| |||||||| |||||    
T  34153215 gtttggcaagtttgaattacccca-ttcaaagg-aagacaactgttgtagctggaa 34153268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 99
Target Start/End: Original strand, 46816134 - 46816183
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    |||||||||||| ||||||  ||||| |||||||||||||||||||||||||    
T  46816134 caagtttgaattgccccatc-cagag-taagacaattgttgtagttggaatg 46816183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 49095210 - 49095291
Alignment:
Q  19 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||||||| || ||||||||| ||| ||||||||| | |||||| || |||||| ||||||||||  |||||||||||    
T  49095210 ggcgaaatgcttgagtc-ttgttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttggggttggaatgca 49095291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 49423686 - 49423740
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||| ||| |||||||||||||||| || |||||| ||||||||||||| |||||    
T  49423686 gtttgacaaatttgaattaccccatt-caaaggtaacacaattgttgtagctggaa 49423740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 51027299 - 51027241
Alignment:
Q  38 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||| |||||||||||||  |||  | ||||| |||||||||||||||||||||||    
T  51027299 tgttgtttagcaagtttgaatttgccccatccagag-taagacaattgttgtagttggaa 51027241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 99
Target Start/End: Original strand, 51027376 - 51027425
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    |||||||||||| ||||||  ||||| |||||||||||||||||||||||||    
T  51027376 caagtttgaattgccccatc-cagag-taagacaattgttgtagttggaatg 51027425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 4e-42; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 19400680 - 19400562
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    |||||| |||||| |||||||||||||||||| |||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19400680 ggaaaatcatgaatgttgggcgaaatgcttgagtcatggtcgtttggcaaatttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 19400581  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  19400580 accttaccctaactaatga 19400562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 3601658 - 3601540
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||||| ||||||||||| |||| |||| |   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3601658 ggaaaaacatgaacgctgggcgaaatgtttgagtcatggccatttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 3601559  T
Q  101 atcttaccctaattaatga 119  Q
    | ||||| |||| ||||||    
T  3601558 accttactctaactaatga 3601540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 3e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 40011934 - 40011834
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    |||||||||||||||||||||||||||||||| | || |  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40011934 ggaaaaacatgaacgttgggcgaaatgcttgagttatggccgtttgacaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 40011835  T
Q  101 a 101  Q
    |    
T  40011834 a 40011834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 1971682 - 1971564
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||| | |||||||||||||||| |||| |   |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1971682 ggaaaaacatgaaagctgggcgaaatgcttgagtcatggccatttggcaagtttgaattaccccatttcagaggcaagacaattgttgtagttggaatgc 1971583  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||| ||| ||||||    
T  1971582 accttaccataactaatga 1971564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 3459107 - 3458989
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||| ||||||| |||||  ||| ||||| |||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3459107 ggaaaaatatgaacgctgggcttaatacttgagtcatggtcgtttggcaagtttgaattacctcatttcagaggtaagacaattgttgtagttggaatgc 3459008  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  3459007 accttaccctaactaatga 3458989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 7e-25
Query Start/End: Original strand, 42 - 119
Target Start/End: Complemental strand, 7082497 - 7082420
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||| ||| ||||||    
T  7082497 gtttggcaagtttgaattaccccttttcagaggtaagagaattgttgtagttggaatgcaccttaccataactaatga 7082420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 4e-23
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 3169984 - 3170080
Alignment:
Q  4 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||| || ||| ||||||||||| |||| ||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  3169984 aaaacatgaatgtcgggtgaaatgcttgagtcat-gttgtttggcaagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttggaatgca 3170080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 19400811 - 19400910
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    ||||||||||||| |  ||||||||||||||| || ||||||||||||||||||||||| ||| |||| || ||||||||||||||||||||||||||||    
T  19400811 ggaaaaacatgaatgaggggcgaaatgcttgagtc-ttgttgtttggcaagtttgaatttacctcatt-caaaggtaagacaattgttgtagttggaatg 19400908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 8576053 - 8576149
Alignment:
Q  20 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    |||||||||| || || |||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||| ||||||    
T  8576053 gcgaaatgctcgagtc-ttgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatga 8576149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 3169852 - 3169766
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgtt 87  Q
    ||||||||||||| |  | ||||||||||||| || | |  ||||||||||||||||||||||||||||||||||||||||||||||    
T  3169852 ggaaaaacatgaatgccgagcgaaatgcttgagtcttggccgtttggcaagtttgaattaccccatttcagaggtaagacaattgtt 3169766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 4e-20
Query Start/End: Original strand, 38 - 119
Target Start/End: Original strand, 27661306 - 27661385
Alignment:
Q  38 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||| ||||||    
T  27661306 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatga 27661385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 4e-20
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 40012065 - 40012163
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    ||||||||||||| |  ||||||||||||||| || | ||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||    
T  40012065 ggaaaaacatgaatgc-gggcgaaatgcttgagtcct-gttgtttggcaagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttggaatg 40012161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 7e-19
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 7141 - 7237
Alignment:
Q  20 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    |||||||||| || |||| |||||||| ||| |||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||| ||||||    
T  7141 gcgaaatgctcgagtcat-gttgtttgacaaatttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatga 7237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 1971813 - 1971912
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    ||||||||||||| |  | || |||||||||| || | ||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||    
T  1971813 ggaaaaacatgaatgcggtgcaaaatgcttgagtcct-gttgtttggcaagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttggaatg 1971910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 3601789 - 3601888
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    ||||||||||||| |  |||| |||||||||| ||||  ||||||||||| |||||| |||||||| |||| ||||||||||||||||||||||||||||    
T  3601789 ggaaaaacatgaatgcggggcaaaatgcttgagtcata-ttgtttggcaaatttgaatttacccca-ttcaaaggtaagacaattgttgtagttggaatg 3601886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 38 - 119
Target Start/End: Complemental strand, 28881269 - 28881190
Alignment:
Q  38 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||| |||||||||||||||||||| || ||  |||||||||||||||||||||||||| |||||||||| ||||||    
T  28881269 tgttgtttgacaagtttgaattaccccatt-caaaga-aagacaattgttgtagttggaatgcaccttaccctaactaatga 28881190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 3459240 - 3459337
Alignment:
Q  3 aaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||||||  ||||||||||||||| |||| |||||||||| ||||| |||| ||| |||| || |||||||||||||||||||||| |||||||    
T  3459240 aaaaacatgaacgcggggcgaaatgcttgagtcat-gttgtttggccagtttaaatttacctcatt-caaaggtaagacaattgttgtagttagaatgca 3459337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 6e-16
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 22283849 - 22283777
Alignment:
Q  38 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaa 112  Q
    ||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||| |||| |||||    
T  22283849 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttatcctaa 22283777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 12743168 - 12743225
Alignment:
Q  37 ttgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagtt 93  Q
    ||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  12743168 ttgttgtttagcaagtttgaatttaccacatttcagaggtaagacaattgttgtagtt 12743225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 12805987 - 12806043
Alignment:
Q  38 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagtt 93  Q
    |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  12805987 tgttgtttagcaagtttgaatttaccacatttcagaggtaagacaattgttgtagtt 12806043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 12806332 - 12806379
Alignment:
Q  47 gcaagtttgaatt-accccatttcagaggtaagacaattgttgtagtt 93  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12806332 gcaagtttgaattcaccccatttcagaggtaagacaattgttgtagtt 12806379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 19036586 - 19036682
Alignment:
Q  20 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || |||| |||||||||||||||||| |||||||||| ||||||    
T  19036586 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaaatgttgtagttggaatgcaccttaccctaactaatga 19036682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 119
Target Start/End: Complemental strand, 8538196 - 8538153
Alignment:
Q  76 aagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    |||||||||||||||||||||||||| |||||||||| ||||||    
T  8538196 aagacaattgttgtagttggaatgcaccttaccctaactaatga 8538153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 11028045 - 11027976
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    |||||||||||| ||||||  ||| ||||||||||||||||| ||||||||||| |||||||||| ||||||    
T  11028045 caagtttgaattgccccatc-cag-ggtaagacaattgttgtggttggaatgcaccttaccctaactaatga 11027976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 119
Target Start/End: Complemental strand, 11346951 - 11346908
Alignment:
Q  76 aagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    |||||||||||||||||||||||||| |||||||||| ||||||    
T  11346951 aagacaattgttgtagttggaatgcaccttaccctaactaatga 11346908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 12743511 - 12743558
Alignment:
Q  47 gcaagtttgaatt-accccatttcagaggtaagacaattgttgtagtt 93  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||    
T  12743511 gcaagtttgaattcacgccatttcagaggtaagacaattgttgtagtt 12743558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 119
Target Start/End: Complemental strand, 30709840 - 30709797
Alignment:
Q  76 aagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    |||||||||||||||||||||||||| |||||||||| ||||||    
T  30709840 aagacaattgttgtagttggaatgcaccttaccctaactaatga 30709797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 7082671 - 7082763
Alignment:
Q  4 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||| || ||| ||||||||||| |||| ||||| || |||||||||| |||||||| |||| |||||| |||||| ||||||||||||    
T  7082671 aaaacatgaatgtcgggtgaaatgcttgagtcat-gttgtatgacaagtttgaatttacccca-ttcaaaggtaacacaatttttgtagttggaa 7082763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 10398273 - 10398330
Alignment:
Q  38 tgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttgg 95  Q
    |||||||| ||||||||||| |||||||| ||||| |||||||||||||||||||||||    
T  10398273 tgttgtttagcaagtttgaatttacccca-ttcaggggtaagacaattgttgtagttgg 10398330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 541598 - 541643
Alignment:
Q  74 gtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||||||||| |||||||||||| |||||||||| ||||||    
T  541598 gtaagacaattgttgcagttggaatgcaccttaccctaactaatga 541643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 4724004 - 4724051
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtag 91  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  4724004 gtttggcaagtttgaattacccca-ttcagagg-aagacaattgttgtag 4724051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 12742957 - 12742909
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||||||||||||  || |||||||||||||||||||||||    
T  12742957 caagtttgaattaccccatttcgtag-taagacaattgttgtagttggaa 12742909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 36311871 - 36311932
Alignment:
Q  37 ttgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||  |||||||||  ||| || |||||||||||||||||||||||||||||||||    
T  36311871 ttgttgtttaacaagtttgaccttatccaatttcagaggtaagacaattgttgtagttggaa 36311932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 18308742 - 18308801
Alignment:
Q  37 ttgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||| |||||| |||||||||  |||||| || ||||||||||||||||||||||||||    
T  18308742 ttgttgcttggcatgtttgaatttacccatt-caaaggtaagacaattgttgtagttggaa 18308801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 33371112 - 33371175
Alignment:
Q  38 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    ||||||||| |||||||||||| ||| |||| || |||||||| |||||||||||||||||||||    
T  33371112 tgttgtttgacaagtttgaatttacctcatt-caaaggtaagataattgttgtagttggaatgca 33371175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 18308537 - 18308484
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||    
T  18308537 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtaggtggaa 18308484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 67 - 97
Target Start/End: Original strand, 13131035 - 13131065
Alignment:
Q  67 ttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||||||||||||||||||||    
T  13131035 ttcagaggtaagacaattgttgtagttggaa 13131065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 36350043 - 36349990
Alignment:
Q  44 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||||| |||||||| || |||||| |||||||||||||||||||    
T  36350043 ttggcaagtttgaatttaccccatt-caaaggtaacacaattgttgtagttggaa 36349990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 1695519 - 1695575
Alignment:
Q  41 tgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||| ||||||||||| ||||||||||| |||||||||| |||||||| ||||||||    
T  1695519 tgtttagcaagtttgaatttaccccattt-agaggtaagaaaattgttgcagttggaa 1695575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 2599532 - 2599483
Alignment:
Q  38 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgt 86  Q
    |||||||| ||||||||||||| | || ||||||||||||||||||||||    
T  2599532 tgttgtttagcaagtttgaatttatccaatttcagaggtaagacaattgt 2599483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 12805775 - 12805727
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||||||||||| |  ||||||||||||||| ||||||||    
T  12805775 caagtttgaattaccccatttc-gtagtaagacaattgttgcagttggaa 12805727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 35566000 - 35566056
Alignment:
Q  41 tgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||| ||||||||||| |||||||| ||||||||||||| |||||||| ||||||||    
T  35566000 tgtttagcaagtttgaatttacccca-ttcagaggtaagataattgttgcagttggaa 35566056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 36349801 - 36349745
Alignment:
Q  41 tgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||| ||||||||||||| ||||||||| ||||||||||  ||||||||||||||||    
T  36349801 tgtttagcaagtttgaatttaccccattt-agaggtaagatgattgttgtagttggaa 36349745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 1400232 - 1400285
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||||||||||||||||  | | | |||||||||||||||| |||||    
T  1400232 gtttggcaagtttgaattaccccatt--aaaaggaagacaattgttgtagctggaa 1400285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 4723682 - 4723728
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgga 96  Q
    |||||||||||||||||||| || ||| |||||||||||||||||||||    
T  4723682 caagtttgaattaccccatt-caaagg-aagacaattgttgtagttgga 4723728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 11347157 - 11347247
Alignment:
Q  4 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgg 95  Q
    |||||||||| || ||| ||||||||||| || | |||||||| || |||| |||| |||||||| || |||||| |||||||||||||||||    
T  11347157 aaaacatgaatgtcgggtgaaatgcttgagtcct-gttgtttgacaggtttaaatttaccccatt-caaaggtaacacaattgttgtagttgg 11347247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 97
Target Start/End: Original strand, 17195314 - 17195346
Alignment:
Q  65 atttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||| ||||||||||||||||||||||||||    
T  17195314 atttcaaaggtaagacaattgttgtagttggaa 17195346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 6972 - 6891
Alignment:
Q  19 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| |||||||||| ||||||||||||    
T  6972 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgcagttggaatgca 6891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 1695066 - 1695013
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||| ||||||||||||||| ||| |||||| |||||||||||||||| |||||    
T  1695066 gtttggaaagtttgaattacccaatt-cagagg-aagacaattgttgtagctggaa 1695013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 1695282 - 1695332
Alignment:
Q  47 gcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||| |||||||| |||| |||||| |||||||||||||||||||    
T  1695282 gcaagtttgaatttacccca-ttcaaaggtaacacaattgttgtagttggaa 1695332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 3459387 - 3459338
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    |||||||||||| ||||||  ||||| |||||||||||||||||||||||||    
T  3459387 caagtttgaattgccccatc-cagag-taagacaattgttgtagttggaatg 3459338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 8575884 - 8575803
Alignment:
Q  19 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| ||||||||||| |||||||||||    
T  8575884 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgtggttggaatgca 8575803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 95
Target Start/End: Complemental strand, 17366452 - 17366398
Alignment:
Q  41 tgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgg 95  Q
    ||||| ||||||||||||| ||| |||| ||||||||||| |||||||||||||||    
T  17366452 tgtttagcaagtttgaatttacctcatt-cagaggtaagataattgttgtagttgg 17366398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 44 - 99
Target Start/End: Original strand, 19036282 - 19036335
Alignment:
Q  44 ttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    |||||||||||||||| ||||||  ||| |||||||||||||||| ||||||||||    
T  19036282 ttggcaagtttgaattgccccatc-cag-ggtaagacaattgttgcagttggaatg 19036335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 19036417 - 19036336
Alignment:
Q  19 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| ||||||||||| |||||||||||    
T  19036417 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgtggttggaatgca 19036336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 19400960 - 19400911
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    |||||||||||| ||||||  ||||| |||||||||||||||||||||||||    
T  19400960 caagtttgaattgccccatc-cagag-taagacaattgttgtagttggaatg 19400911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 44 - 99
Target Start/End: Complemental strand, 22284169 - 22284116
Alignment:
Q  44 ttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    |||||||||||||||| ||||||  ||||| |||||||||||||| ||||||||||    
T  22284169 ttggcaagtttgaattgccccatc-cagag-taagacaattgttgcagttggaatg 22284116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 44 - 99
Target Start/End: Complemental strand, 28881589 - 28881536
Alignment:
Q  44 ttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    |||||||||||||||| ||||||  ||| |||||||||||||||| ||||||||||    
T  28881589 ttggcaagtttgaattgccccatc-cag-ggtaagacaattgttgcagttggaatg 28881536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 65
Target Start/End: Original strand, 36350251 - 36350278
Alignment:
Q  38 tgttgtttggcaagtttgaattacccca 65  Q
    ||||||||||||||||||||||||||||    
T  36350251 tgttgtttggcaagtttgaattacccca 36350278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 83; Significance: 9e-40; HSPs: 2)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 83; E-Value: 9e-40
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 2587 - 2469
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    |||||||||||||| ||||||||||||||||| |||| |  |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2587 ggaaaaacatgaacattgggcgaaatgcttgagtcatggccgtttggtaattttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 2488  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  2487 accttaccctaactaatga 2469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589; HSP #2
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 101
Target Start/End: Original strand, 4805 - 4834
Alignment:
Q  72 aggtaagacaattgttgtagttggaatgca 101  Q
    ||||||||||||||||||||||||||||||    
T  4805 aggtaagacaattgttgtagttggaatgca 4834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 9e-40; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 9e-40
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 47269218 - 47269100
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||||||| |||||||| ||||||| |  || ||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||    
T  47269218 ggaaaaacatgaacgtttggcgaaatacttgaattagggtcgtttggcaagtttgaattaccccatttcacaggtaagctaattgttgtagttggaatgc 47269119  T
Q  101 atcttaccctaattaatga 119  Q
    |||||||||||||||||||    
T  47269118 atcttaccctaattaatga 47269100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 2205940 - 2206042
Alignment:
Q  17 tgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaa 116  Q
    |||||||||||||||| |||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||    
T  2205940 tgggcgaaatgcttgagtcatggtcgtttgacaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcaccttatcctaactaa 2206039  T
Q  117 tga 119  Q
    |||    
T  2206040 tga 2206042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 17183535 - 17183417
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||||  ||| |||||||||||| |||| |  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17183535 ggaaaaacatgaacactggacgaaatgcttgagtcatggccgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgcagttggaatgc 17183436  T
Q  101 atcttaccctaattaatga 119  Q
    | || ||||||| ||||||    
T  17183435 acctcaccctaactaatga 17183417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 18237884 - 18237766
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||| ||||||| ||||| |||||||||| |||| |  ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  18237884 ggaaaaatatgaacgatgggccaaatgcttgagtcatggccgtttggcaagtttgagttaccccaattcagaggtaagacaattgttgtagttggaatgc 18237785  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  18237784 accttaccctaactaatga 18237766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 48220631 - 48220749
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||||||||| |||||||||||| |||| |  ||||| ||||||||||||| |||||||||||| ||||| ||||||||||||||||||||    
T  48220631 ggaaaaacatgaacgttggacgaaatgcttgagtcatggccgtttgacaagtttgaattagcccatttcagagctaagataattgttgtagttggaatgc 48220730  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  48220731 accttaccctaactaatga 48220749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 28978943 - 28979057
Alignment:
Q  5 aaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatct 104  Q
    ||||||||| || | ||||||||||| | || | | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  28978943 aaacatgaatgtcgagcgaaatgctttagtcctggctgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgcagttggaatgcacct 28979042  T
Q  105 taccctaattaatga 119  Q
    |||||||| ||||||    
T  28979043 taccctaactaatga 28979057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 34141184 - 34141067
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||||| ||| |||||||||||| |||| |  ||||| |||||||||||||||||| ||||||||||||| |||||||| |||||||||||    
T  34141184 ggaaaaacatgaacgctgg-cgaaatgcttgagtcatggccgtttgacaagtttgaattaccccaattcagaggtaagagaattgttgcagttggaatgc 34141086  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  34141085 accttaccctaactaatga 34141067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 39477127 - 39477245
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||| |  | ||||||||||||| || | |  |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  39477127 ggaaaaacatgaatgccgagcgaaatgcttgagtcctggccgtttggcaagtttgaattaccccatttcagcggtaagataattgttgtagttggaatgc 39477226  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  39477227 accttaccctaactaatga 39477245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 3e-27
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 26601706 - 26601783
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||    
T  26601706 gtttgacaagtttgaattaccccatttcagaggtaagataattgttgtagttggaatgcaccttaccctaactaatga 26601783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 3e-24
Query Start/End: Original strand, 43 - 119
Target Start/End: Complemental strand, 41217892 - 41217816
Alignment:
Q  43 tttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||| ||||||    
T  41217892 tttggtaagtttgaattaccccatatcagaggtaagacaattgctgtagttggaatgcaccttaccctaactaatga 41217816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 38 - 119
Target Start/End: Complemental strand, 13920587 - 13920508
Alignment:
Q  38 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||| |||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  13920587 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcatcttaccctaactaatga 13920508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 30360966 - 30361064
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||| || ||||||||||||||| || | |||||||||| | ||||||||  |||| |||| |||||||||||||||||||||||||||||    
T  30360966 ggaaaaacatgaatgtcgggcgaaatgcttgagtcct-gttgtttggcgaatttgaatttacccaattcaaaggtaagacaattgttgtagttggaatgc 30361064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 30360800 - 30360718
Alignment:
Q  37 ttgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    |||| |||||||||||||||||||||| |||||||| |||||||||| ||| |||||||||||||  ||||||||| ||||||    
T  30360800 ttgtcgtttggcaagtttgaattacccaatttcagatgtaagacaatagttatagttggaatgcacattaccctaactaatga 30360718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 4e-20
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 18238015 - 18238114
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    |||||||||||||||   |||||||||||||| || | |||||||||| |||||||| |||||||| |||| ||||||||||||||||||||||||||||    
T  18238015 ggaaaaacatgaacgcgaggcgaaatgcttgagtcct-gttgtttggctagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttggaatg 18238112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 48220501 - 48220402
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||| |  ||||||||||||||| || || ||||||||||||||||||||  |||  |||| |||| ||||||||||||||||||||||||    
T  48220501 ggaaaaacatgaatgcggggcgaaatgcttgagtc-ttattgtttggcaagtttgaatttgccccattcaaaggtgagacaattgttgtagttggaatgc 48220403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 17183666 - 17183765
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    ||||||||||||| |   ||| |||||||||| || | ||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||    
T  17183666 ggaaaaacatgaatgcgaggcaaaatgcttgagtcct-gttgtttggcaagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttggaatg 17183763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 9367029 - 9367125
Alignment:
Q  20 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || ||||||||||||||||||||||| |||||||||| ||||||    
T  9367029 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaattgttgtagttggaatgcaccttaccctaactaatga 9367125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 10523367 - 10523271
Alignment:
Q  20 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||||||| || || ||||||| ||||||||||||||| |||| || ||| ||||||||||||||||||||||| || |||||||||| ||||||    
T  10523367 gcgaaatgcttgagtcctt-ttgtttgacaagtttgaattaccacatt-caaagg-aagacaattgttgtagttggaatacaccttaccctaactaatga 10523271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 48 - 119
Target Start/End: Original strand, 17320137 - 17320206
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||||||||||||||| | ||| |||||||||||||||||||||||||| |||||||||| ||||||    
T  17320137 caagtttgaattaccccatttaa-agg-aagacaattgttgtagttggaatgcaccttaccctaactaatga 17320206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 20565057 - 20564961
Alignment:
Q  20 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || |||| |||||||||||||||||| |||||||||| ||||||    
T  20565057 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaaatgttgtagttggaatgcaccttaccctaactaatga 20564961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 45363140 - 45363257
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    ||||||||||||| |  | ||||||||||||| || | |||||||| || ||||||||| | | |||| || ||||||||||||||||| ||||||||||    
T  45363140 ggaaaaacatgaatgccgagcgaaatgcttgagtcct-gttgtttgacaggtttgaatttatctcatt-caaaggtaagacaattgttgcagttggaatg 45363237  T
Q  100 catcttaccctaattaatga 119  Q
    || |||||||||| ||||||    
T  45363238 caccttaccctaactaatga 45363257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 40 - 101
Target Start/End: Complemental strand, 28978934 - 28978873
Alignment:
Q  40 ttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    ||||||| ||||||||||||  |||| |||| ||||||||||||||||| ||||||||||||    
T  28978934 ttgtttgacaagtttgaattgacccaattcaaaggtaagacaattgttggagttggaatgca 28978873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 34141315 - 34141414
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    |||||||||||||||  ||||||||| ||||| || | |||||| ||| |||||||||| || ||||| || ||||||||||||||||||||||| ||||    
T  34141315 ggaaaaacatgaacgcggggcgaaatacttgagtcct-gttgttaggccagtttgaatttactccatt-caaaggtaagacaattgttgtagttgaaatg 34141412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 41218066 - 41218162
Alignment:
Q  4 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||| |  ||| ||||||||||| |||| |||| ||||||||||| ||||   ||  |||| ||||||||||||||||||||||||||||||    
T  41218066 aaaacatgaatgacgggggaaatgcttgagtcat-gttgcttggcaagtttaaatttggcccattcaaaggtaagacaattgttgtagttggaatgca 41218162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 2356566 - 2356513
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||| ||||||||||||| ||  |||||||||||||||||||||||||||||||||    
T  2356566 gtttagcaagtttgaatttcc--atttcagaggtaagacaattgttgtagttggaa 2356513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 26601499 - 26601436
Alignment:
Q  38 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||||||||||||||| ||||||||  | ||||||||||||||||||| ||||||||||    
T  26601499 tgttgtttggcaagtttgaatttaccccattaaa-aggtaagacaattgttgtacttggaatgca 26601436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 40588849 - 40588751
Alignment:
Q  20 gcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatg 118  Q
    ||||||||||||| || | ||||||||||| ||||||||| | | |||| || ||||||||||||||||| |||||||||||| |||||||| | |||||    
T  40588849 gcgaaatgcttgagtcct-gttgtttggcaggtttgaatttatctcatt-caaaggtaagacaattgttgcagttggaatgcaccttaccctgactaatg 40588752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 119
Target Start/End: Complemental strand, 17839569 - 17839526
Alignment:
Q  76 aagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    |||||||||||||||||||||||||| |||||||||| ||||||    
T  17839569 aagacaattgttgtagttggaatgcaccttaccctaactaatga 17839526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 119
Target Start/End: Original strand, 20378639 - 20378708
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    |||||||||||| ||||||  |||||| |||||||||||||||||||||||||| ||||| |||| ||||||    
T  20378639 caagtttgaattgccccatc-cagagg-aagacaattgttgtagttggaatgcaccttactctaactaatga 20378708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 119
Target Start/End: Complemental strand, 34139411 - 34139368
Alignment:
Q  76 aagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    |||||||||||||||||||||||||| |||||||||| ||||||    
T  34139411 aagacaattgttgtagttggaatgcaccttaccctaactaatga 34139368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 48271140 - 48271193
Alignment:
Q  44 ttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||| |||||||| |||| ||||||||||||||||||||||||||    
T  48271140 ttggcaagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttggaa 48271193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 1642310 - 1642257
Alignment:
Q  41 tgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagtt 93  Q
    ||||| || |||||||||| ||||||||||| ||||||||||||||||||||||    
T  1642310 tgtttagccagtttgaatttaccccatttcataggtaagacaattgttgtagtt 1642257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 15337623 - 15337567
Alignment:
Q  41 tgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||| |||| ||| |||| |||||||||||||||||||||||||||||    
T  15337623 tgtttggcaagtttaaatttacctcatt-cagaggtaagacaattgttgtagttggaa 15337567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 4230291 - 4230346
Alignment:
Q  37 ttgttgtttggcaagtttgaatt-accccat-ttcagaggtaagacaattgttgta 90  Q
    ||||||||| ||||||||||||| ||||||  ||||||||||||||||||||||||    
T  4230291 ttgttgtttagcaagtttgaatttaccccaaattcagaggtaagacaattgttgta 4230346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 48270925 - 48270873
Alignment:
Q  45 tggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    |||||||||||||||||||||||  | | | ||||||||||||||||||||||||    
T  48270925 tggcaagtttgaattaccccatt--aaaagaaagacaattgttgtagttggaatg 48270873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 1642525 - 1642571
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||||||||    
T  1642525 caagtttgaatt--cccatttca-aggtaagacaattgttgtagttggaa 1642571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 10224559 - 10224612
Alignment:
Q  44 ttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||| |||||||| |||| |||||| |||||||||||||||||||    
T  10224559 ttggcaagtttgaatttacccca-ttcaaaggtaacacaattgttgtagttggaa 10224612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 20877767 - 20877714
Alignment:
Q  44 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||||| |||||||  ||||||||| |||||||||||||||||||    
T  20877767 ttggcaagtttgaatttaccccatg-cagaggtaacacaattgttgtagttggaa 20877714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 21187014 - 21186961
Alignment:
Q  44 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||| ||||||||||| |||||||| || ||||||||||||||||||||||||||    
T  21187014 ttgggaagtttgaatttaccccatt-caaaggtaagacaattgttgtagttggaa 21186961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 21651015 - 21651068
Alignment:
Q  44 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||||| | |||||| ||||||||| |||||||||||||||||||    
T  21651015 ttggcaagtttgaatttatcccatt-cagaggtaacacaattgttgtagttggaa 21651068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 20877527 - 20877471
Alignment:
Q  41 tgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||| ||||||||||||| ||| ||||| |||||||||| |||||||||||||||||    
T  20877527 tgtttagcaagtttgaatttacctcattt-agaggtaagataattgttgtagttggaa 20877471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 21614393 - 21614440
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  21614393 caagtttgaattaccccatct-agagg-aagacaattgttgtagttggaa 21614440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 28113869 - 28113813
Alignment:
Q  41 tgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||| ||||||||||| ||||||||||| |||||||||| |||||||| ||||||||    
T  28113869 tgtttagcaagtttgaatttaccccattt-agaggtaagataattgttgcagttggaa 28113813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 97
Target Start/End: Original strand, 3380626 - 3380658
Alignment:
Q  65 atttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||||||||||||||| |||||||    
T  3380626 atttcagaggtaagacaattgttgtcgttggaa 3380658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 21614506 - 21614447
Alignment:
Q  38 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||| |||||||||||| ||| |||| || |||||||| |||||||||||||||||    
T  21614506 tgttgtttgacaagtttgaatttacctcatt-caaaggtaagataattgttgtagttggaa 21614447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 28113998 - 28114044
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgga 96  Q
    ||||||||||||||||||||| ||||| ||||||||||||| |||||||    
T  28113998 caagtttgaattaccccattt-agagg-aagacaattgttgcagttgga 28114044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 28114114 - 28114055
Alignment:
Q  38 tgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||| |||||||||||||| |||||||| |||| |||||| |||||||||| ||||||||    
T  28114114 tgttgcttggcaagtttgaatttacccca-ttcaaaggtaacacaattgttggagttggaa 28114055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 30361245 - 30361301
Alignment:
Q  41 tgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||| |||||||||||||  |||  ||||| || ||||||||||||||||||||||    
T  30361245 tgtttagcaagtttgaatttgccccattcaggggcaagacaattgttgtagttggaa 30361301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 42683139 - 42683198
Alignment:
Q  38 tgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||| ||||||||||| || |||||||| || ||||||| |||||||||||||||||    
T  42683139 tgttgtttagcaagtttgaatttgccccattt-agtggtaagataattgttgtagttggaa 42683198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 99
Target Start/End: Original strand, 9366728 - 9366778
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    |||||||||||| ||||||  ||| |||||||||||||||| ||||||||||    
T  9366728 caagtttgaattgccccataccag-ggtaagacaattgttgcagttggaatg 9366778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 9366860 - 9366779
Alignment:
Q  19 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| ||||||||||| |||||||||||    
T  9366860 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgtggttggaatgca 9366779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 93
Target Start/End: Original strand, 15337832 - 15337881
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagtt 93  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||| |||||    
T  15337832 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttttagtt 15337881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 20565226 - 20565307
Alignment:
Q  19 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| ||||||||||| |||||||||||    
T  20565226 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgtggttggaatgca 20565307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 44 - 99
Target Start/End: Complemental strand, 20565361 - 20565308
Alignment:
Q  44 ttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    |||||||||||||||| ||||||  ||| |||||||||||||||| ||||||||||    
T  20565361 ttggcaagtttgaattgccccatc-cag-ggtaagacaattgttgcagttggaatg 20565308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 99
Target Start/End: Original strand, 26601386 - 26601435
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    |||||||||||| ||||||  ||||| |||||||||||||||||||||||||    
T  26601386 caagtttgaattgccccatc-cagag-taagacaattgttgtagttggaatg 26601435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 36393751 - 36393804
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||| |||| |||||    
T  36393751 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgtcgtagctggaa 36393804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 99
Target Start/End: Original strand, 39476849 - 39476898
Alignment:
Q  48 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    |||||||||||| ||||||  ||||| |||||||||||||||||||||||||    
T  39476849 caagtttgaattgccccatc-cagag-taagacaattgttgtagttggaatg 39476898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 41049063 - 41049010
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||| ||||||||||||||||||| |||| ||| |||||||||||||||| |||||    
T  41049063 gttttgcaagtttgaattacccca-ttcaaagg-aagacaattgttgtagctggaa 41049010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 42735542 - 42735489
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||||||||||| || |||| ||| |||||||||||||||| |||||    
T  42735542 gtttggcaagtttgaattaccaca-ttcaaagg-aagacaattgttgtagctggaa 42735489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 43351027 - 43351080
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||||||||||| || |||| ||| |||||||||||||||| |||||    
T  43351027 gtttggcaagtttgaattacctca-ttcaaagg-aagacaattgttgtagctggaa 43351080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 67; Significance: 3e-30; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 2109 - 1992
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||||| ||| |||||||||||| |||| |  ||||| |||||||||||||||||| ||||||||||||| |||||||| |||||||||||    
T  2109 ggaaaaacatgaacgctgg-cgaaatgcttgagtcatggccgtttgacaagtttgaattaccccaattcagaggtaagagaattgttgcagttggaatgc 2011  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  2010 accttaccctaactaatga 1992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 2240 - 2339
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    |||||||||||||||  ||||||||| ||||| || | |||||| ||| |||||||||| || ||||| || ||||||||||||||||||||||| ||||    
T  2240 ggaaaaacatgaacgcggggcgaaatacttgagtcct-gttgttaggccagtttgaatttactccatt-caaaggtaagacaattgttgtagttgaaatg 2337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 63; Significance: 8e-28; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 63; E-Value: 8e-28
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 17804 - 17922
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||| |  | ||||||||||||| || |    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  17804 ggaaaaacatgaatgccgagcgaaatgcttgagtcctaaccgtttggcaagtttgaattatcccatttcagaggtaagacaattgttgtagttgaaatgc 17903  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  17904 accttaccctaactaatga 17922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 17671 - 17581
Alignment:
Q  4 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgg 95  Q
    |||||||||| |  ||||||||||||| | |||| ||||||||| |||||| |||| |||||||| || | |||| |||||||||||||||||    
T  17671 aaaacatgaatgccgggcgaaatgcttaagtcat-gttgtttggaaagtttaaatttaccccatt-caaaagtaacacaattgttgtagttgg 17581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 8e-28; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 8e-28
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 3765674 - 3765792
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||| |  | || |||||||||| || | |  ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  3765674 ggaaaaacatgaatgccgagccaaatgcttgagtcctggccgtttggcaagtttgaattaccccatttgagaggtaagacaattgttgcagttggaatgc 3765773  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  3765774 accttaccctaactaatga 3765792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 35058622 - 35058740
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||| || | |||||||||| ||  | | |  |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||     
T  35058622 ggaaaaacatgaatgtcgagcgaaatgctagagccctggccgtttggcaagtttgaattacccaatttgagaggtaagacaattgttgtagttggaatgt 35058721  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  35058722 accttaccctaactaatga 35058740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 4e-20
Query Start/End: Original strand, 38 - 119
Target Start/End: Original strand, 24021023 - 24021102
Alignment:
Q  38 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||| ||||||    
T  24021023 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatga 24021102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 801485 - 801369
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 100  Q
    ||||||||||||| |  | ||||||||||||| || | |  |||| |||||||||||||||| |||| || ||| |||||||||||||||||||||||||    
T  801485 ggaaaaacatgaatgccgagcgaaatgcttgagtcttggccgtttcgcaagtttgaattacctcatt-caaagg-aagacaattgttgtagttggaatgc 801388  T
Q  101 atcttaccctaattaatga 119  Q
    | |||||||||| ||||||    
T  801387 accttaccctaactaatga 801369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 38 - 119
Target Start/End: Complemental strand, 2192680 - 2192601
Alignment:
Q  38 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||| | |||||||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||| ||||||    
T  2192680 tgttgttcgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatga 2192601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 4e-17
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 34134935 - 34134879
Alignment:
Q  38 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttg 94  Q
    |||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||    
T  34134935 tgttgtttagcaagtttgaattattccatttcagaggtaagacaattgttgtagttg 34134879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 27640480 - 27640384
Alignment:
Q  20 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| ||||||| |||||||||||||||||| |||||||||| ||||||    
T  27640480 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aagacaaatgttgtagttggaatgcaccttaccctaactaatga 27640384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 6205784 - 6205688
Alignment:
Q  20 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || |||| |||||||||||||||||| |||||||||| ||||||    
T  6205784 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaaatgttgtagttggaatgcaccttaccctaactaatga 6205688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 38 - 119
Target Start/End: Complemental strand, 11692734 - 11692655
Alignment:
Q  38 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||| ||||||||||||||| |||| || ||| || |||| |||||||||||||||||| |||||||||| ||||||    
T  11692734 tgttgtttgacaagtttgaattacctcatt-caaagg-aatacaaatgttgtagttggaatgcaccttaccctaactaatga 11692655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 35058456 - 35058393
Alignment:
Q  38 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    ||||||||||  |||||||||| |||||||| || ||||||||||||||||||||||||||||||    
T  35058456 tgttgtttggagagtttgaatttaccccatt-caaaggtaagacaattgttgtagttggaatgca 35058393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 29066874 - 29066757
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    ||||||||||||| |  | ||||||||||||| |||| ||||||||||| ||||||||| |   |||| || || ||||| |||||||| ||||||||||    
T  29066874 ggaaaaacatgaatgccgagcgaaatgcttgagtcat-gttgtttggcaggtttgaatttatatcatt-caaagataagaaaattgttgcagttggaatg 29066777  T
Q  100 catcttaccctaattaatga 119  Q
    || |||||||||| ||||||    
T  29066776 caccttaccctaactaatga 29066757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 29075887 - 29075770
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    ||||||||||||| |  | ||||||||||||| |||| ||||||||||| ||||||||| | | |||| ||  | ||||| |||||||| ||||||||||    
T  29075887 ggaaaaacatgaatgccgagcgaaatgcttgagtcat-gttgtttggcaggtttgaatttatctcatt-caacgataagaaaattgttgcagttggaatg 29075790  T
Q  100 catcttaccctaattaatga 119  Q
    || |||||||||| ||||||    
T  29075789 caccttaccctaactaatga 29075770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 29108461 - 29108344
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    ||||||||||||| |  | ||||||||||||| |||| ||||||||||| ||||||||| | | |||| ||  | ||||| |||||||| ||||||||||    
T  29108461 ggaaaaacatgaatgccgagcgaaatgcttgagtcat-gttgtttggcaggtttgaatttatctcatt-caacgataagaaaattgttgcagttggaatg 29108364  T
Q  100 catcttaccctaattaatga 119  Q
    || |||||||||| ||||||    
T  29108363 caccttaccctaactaatga 29108344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 29110859 - 29110742
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    ||||||||||||| |  | ||||||||||||| |||| ||||||||||| ||||||||| | | |||| ||  | ||||| |||||||| ||||||||||    
T  29110859 ggaaaaacatgaatgccgagcgaaatgcttgagtcat-gttgtttggcaggtttgaatttatctcatt-caacgataagaaaattgttgcagttggaatg 29110762  T
Q  100 catcttaccctaattaatga 119  Q
    || |||||||||| ||||||    
T  29110761 caccttaccctaactaatga 29110742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 30257506 - 30257559
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||    
T  30257506 gtttggcaagtttgaattaccccattt-agagg-aagacaattgttgtagctggaa 30257559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 801618 - 801710
Alignment:
Q  4 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||| |  ||||||||||||||| || | || |||| || |||||||||| |||||||| || ||||||||||||||||||||||||||    
T  801618 aaaacatgaatgccgggcgaaatgcttgagtcct-gtcgttttgccagtttgaatttaccccatt-caaaggtaagacaattgttgtagttggaa 801710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 20192605 - 20192543
Alignment:
Q  36 attgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||| ||||||||||||| | || |||| ||||||| ||||||||||||||||||||    
T  20192605 attgttgtttagcaagtttgaatttatccaatttaagaggtaggacaattgttgtagttggaa 20192543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 20242049 - 20242111
Alignment:
Q  36 attgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||| ||||||||||||| | || |||| ||||||| ||||||||||||||||||||    
T  20242049 attgttgtttagcaagtttgaatttatccaatttaagaggtaggacaattgttgtagttggaa 20242111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 22136033 - 22136095
Alignment:
Q  36 attgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||| ||||||||||||| | || |||| ||||||| ||||||||||||||||||||    
T  22136033 attgttgtttagcaagtttgaatttatccaatttaagaggtaggacaattgttgtagttggaa 22136095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 22143386 - 22143448
Alignment:
Q  36 attgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||| ||||||||||||| | || |||| ||||||| ||||||||||||||||||||    
T  22143386 attgttgtttagcaagtttgaatttatccaatttaagaggtaggacaattgttgtagttggaa 22143448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 12397270 - 12397321
Alignment:
Q  44 ttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttgg 95  Q
    |||||||||||||| |||||||| |||| ||||||||||||||||||||||||    
T  12397270 ttggcaagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttgg 12397321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 14482746 - 14482806
Alignment:
Q  38 tgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||| ||||||||||| |||||| | |||||||| ||||||||||||||||| ||||    
T  14482746 tgttgtttagcaagtttgaaattacccaaattcagaggcaagacaattgttgtagtgggaa 14482806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 97
Target Start/End: Original strand, 17465287 - 17465319
Alignment:
Q  65 atttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||||||||||||||||||||||    
T  17465287 atttcagaggtaagacaattgttgtagttggaa 17465319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 6205953 - 6206034
Alignment:
Q  19 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| |||||||||||||||||||||||    
T  6205953 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgtagttggaatgca 6206034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 13402815 - 13402762
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||    
T  13402815 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtagctggaa 13402762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 4495397 - 4495446
Alignment:
Q  44 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagtt 93  Q
    |||||||||||||||| |||||| ||||||||||| |||||||||||||||    
T  4495397 ttggcaagtttgaattgacccca-ttcagaggtaacacaattgttgtagtt 4495446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 13403313 - 13403362
Alignment:
Q  48 caagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||| |||||||| |||| ||||||||||||||||||||||||||    
T  13403313 caagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttggaa 13403362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 14123099 - 14123152
Alignment:
Q  48 caagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||||| ||||||||| | ||||||||||||| ||||||||||||||||    
T  14123099 caagtttgaatttaccccatttaa-aggtaagacaatttttgtagttggaatgca 14123152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 14123421 - 14123470
Alignment:
Q  47 gcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||  |||||| |||||| ||||||||||||||||||||||    
T  14123421 gcaagtttgaatttgcccatt-cagaggcaagacaattgttgtagttggaa 14123470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 29067007 - 29067103
Alignment:
Q  4 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    ||||||||||||| | ||||||||||||| || | |||||||| || ||||||||| | | |||| || | ||||||||||||||| ||||||||||||    
T  29067007 aaaacatgaacgtcgagcgaaatgcttgagtcct-gttgtttgacaggtttgaatttatctcatt-caaatgtaagacaattgttgcagttggaatgca 29067103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 29108594 - 29108690
Alignment:
Q  4 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    ||||||||||||| | ||||||||||||| || | |||||||| || ||||||||| | | |||| || | ||||||||||||||| ||||||||||||    
T  29108594 aaaacatgaacgtcgagcgaaatgcttgagtcct-gttgtttgacaggtttgaatttatctcatt-caaatgtaagacaattgttgcagttggaatgca 29108690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 4495615 - 4495671
Alignment:
Q  41 tgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    ||||| ||||||||||| |||||||| |||||||||||||||||| ||| ||||||||    
T  4495615 tgtttagcaagtttgaatttacccca-ttcagaggtaagacaattattgcagttggaa 4495671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 14115313 - 14115262
Alignment:
Q  44 ttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||||||||||||||| |||| | ||| ||||||||||||||||||||||    
T  14115313 ttggcaagtttgaattaccctatttaa-agg-aagacaattgttgtagttggaa 14115262  T

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Target: chr6; HSP #34
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 11692920 - 11693001
Alignment:
Q  19 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| ||||||||||| |||||||||||    
T  11692920 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgtggttggaatgca 11693001  T

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Target: chr6; HSP #35
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 27640667 - 27640729
Alignment:
Q  38 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 101  Q
    |||||||| ||| |||||||||| | |||| || |||||| ||||||||||| |||||||||||    
T  27640667 tgttgttttgcaggtttgaattatctcatt-caaaggtaacacaattgttgtggttggaatgca 27640729  T

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Target: chr6; HSP #36
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 32027555 - 32027608
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 97  Q
    |||||||| ||||||||||||||| |||| ||| |||||||||||||||| |||||    
T  32027555 gtttggcatgtttgaattacccca-ttcaaagg-aagacaattgttgtagctggaa 32027608  T

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Target: scaffold0861 (Bit Score: 54; Significance: 2e-22; HSPs: 2)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 2404 - 2503
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    ||||||||||||| |  ||||||||||||||| || ||||| ||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||    
T  2404 ggaaaaacatgaatgccgggcgaaatgcttgagtc-ttgttttttggcaagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttggaatg 2501  T

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Target: scaffold0861; HSP #2
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 75
Target Start/End: Complemental strand, 2233 - 2200
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggt 75  Q
    |||||| |||||||||||||||||||||||||||    
T  2233 gtttggaaagtttgaattaccccatttcagaggt 2200  T

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Target: scaffold0031 (Bit Score: 50; Significance: 4e-20; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 50; E-Value: 4e-20
Query Start/End: Original strand, 38 - 119
Target Start/End: Complemental strand, 85607 - 85528
Alignment:
Q  38 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 119  Q
    ||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||| ||||||    
T  85607 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatga 85528  T

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Target: scaffold0268 (Bit Score: 43; Significance: 6e-16; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 43; E-Value: 6e-16
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 14749 - 14677
Alignment:
Q  38 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaa 112  Q
    ||||||||| |||||||||||||||||||| || ||| ||||||||||||||||||||||||||  |||||||||    
T  14749 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcacgttaccctaa 14677  T

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Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 64226 - 64159
Alignment:
Q  42 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttacccta 111  Q
    ||||||||||||||||||||  |||| || ||| |||||||||||||||||||||||| | |||||||||    
T  64226 gtttggcaagtttgaattacttcatt-caaagg-aagacaattgttgtagttggaatgtaccttacccta 64159  T

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Target: scaffold0859 (Bit Score: 31; Significance: 0.000000009; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 93
Target Start/End: Original strand, 1169 - 1199
Alignment:
Q  63 ccatttcagaggtaagacaattgttgtagtt 93  Q
    |||||||||||||||||||||||||||||||    
T  1169 ccatttcagaggtaagacaattgttgtagtt 1199  T

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Target: scaffold1700 (Bit Score: 29; Significance: 0.0000001; HSPs: 2)
Name: scaffold1700
Description:

Target: scaffold1700; HSP #1
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 384 - 436
Alignment:
Q  47 gcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 99  Q
    |||||||||||||  |||  ||||| || ||||||||||||||||||||||||    
T  384 gcaagtttgaatttgccccattcaggggcaagacaattgttgtagttggaatg 436  T

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Target: scaffold1700; HSP #2
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 48 - 114
Alignment:
Q  1 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatt 67  Q
    ||||||||||||| || ||||||||||||||| ||  |||||||| || |||||||| ||||||||||    
T  48 ggaaaaacatgaatgtcgggcgaaatgcttgagtc-ctgttgtttcgccagtttgaatttaccccatt 114  T

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