View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4328-Insertion-6 (Length: 92)

Name: NF4328-Insertion-6
Description: NF4328
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4328-Insertion-6
NF4328-Insertion-6
[»] chr8 (23 HSPs)
chr8 (8-61)||(24789533-24789586)
chr8 (8-61)||(1376206-1376259)
chr8 (2-61)||(6109637-6109696)
chr8 (8-58)||(38020069-38020119)
chr8 (8-61)||(2620995-2621048)
chr8 (8-61)||(24891452-24891505)
chr8 (8-61)||(25419288-25419341)
chr8 (10-61)||(25500169-25500220)
chr8 (8-61)||(222004-222057)
chr8 (8-61)||(691159-691212)
chr8 (8-61)||(735627-735680)
chr8 (8-61)||(859523-859576)
chr8 (8-57)||(1667277-1667326)
chr8 (8-61)||(3616899-3616952)
chr8 (8-61)||(19643548-19643601)
chr8 (8-61)||(26561262-26561315)
chr8 (8-61)||(30801269-30801321)
chr8 (8-60)||(2472316-2472368)
chr8 (8-50)||(7580078-7580120)
chr8 (4-54)||(20216224-20216274)
chr8 (4-54)||(20235822-20235872)
chr8 (8-61)||(7057626-7057679)
chr8 (28-57)||(39221601-39221630)
[»] chr5 (26 HSPs)
chr5 (8-61)||(14645336-14645389)
chr5 (8-61)||(41616605-41616658)
chr5 (4-61)||(1060965-1061022)
chr5 (9-61)||(36470484-36470536)
chr5 (10-57)||(16186791-16186838)
chr5 (8-55)||(35853543-35853590)
chr5 (8-61)||(7978052-7978105)
chr5 (10-55)||(32302412-32302457)
chr5 (9-61)||(41983270-41983322)
chr5 (14-61)||(14088295-14088342)
chr5 (10-61)||(29455814-29455865)
chr5 (8-58)||(15674016-15674066)
chr5 (8-54)||(19254528-19254574)
chr5 (11-61)||(19549374-19549424)
chr5 (8-57)||(639399-639448)
chr5 (4-60)||(18595378-18595434)
chr5 (10-61)||(22632278-22632329)
chr5 (8-50)||(4901985-4902027)
chr5 (8-58)||(33347112-33347162)
chr5 (8-54)||(34718824-34718870)
chr5 (8-54)||(41692508-41692554)
chr5 (8-54)||(6277853-6277901)
chr5 (8-61)||(14087685-14087737)
chr5 (29-61)||(24489106-24489138)
chr5 (29-61)||(31149728-31149760)
chr5 (8-55)||(30774828-30774875)
[»] chr4 (42 HSPs)
chr4 (8-61)||(52595575-52595628)
chr4 (8-61)||(3387243-3387296)
chr4 (8-61)||(29149043-29149096)
chr4 (4-61)||(33983163-33983220)
chr4 (4-61)||(41003346-41003403)
chr4 (8-61)||(3094994-3095047)
chr4 (8-61)||(21075860-21075913)
chr4 (4-61)||(22313382-22313439)
chr4 (8-61)||(32655549-32655602)
chr4 (8-61)||(39804300-39804353)
chr4 (12-61)||(42053295-42053344)
chr4 (8-61)||(52180805-52180858)
chr4 (8-61)||(54979173-54979226)
chr4 (8-55)||(1758013-1758060)
chr4 (8-55)||(8805959-8806006)
chr4 (4-55)||(26340264-26340315)
chr4 (11-61)||(2224984-2225034)
chr4 (8-61)||(2721260-2721313)
chr4 (8-61)||(12185809-12185862)
chr4 (8-61)||(12187801-12187854)
chr4 (4-61)||(14576818-14576875)
chr4 (8-61)||(22829768-22829821)
chr4 (8-61)||(31786444-31786497)
chr4 (8-61)||(42755371-42755424)
chr4 (12-60)||(25938399-25938447)
chr4 (4-55)||(41780683-41780734)
chr4 (8-54)||(33733407-33733453)
chr4 (2-55)||(28234206-28234258)
chr4 (4-61)||(29994346-29994403)
chr4 (10-55)||(56445196-56445241)
chr4 (9-61)||(31713662-31713714)
chr4 (10-61)||(22306830-22306881)
chr4 (20-58)||(7262054-7262092)
chr4 (8-58)||(11034726-11034776)
chr4 (8-54)||(45097592-45097638)
chr4 (8-54)||(46080748-46080794)
chr4 (8-54)||(52802299-52802345)
chr4 (8-54)||(53140641-53140687)
chr4 (8-61)||(652275-652328)
chr4 (20-61)||(44293024-44293065)
chr4 (30-61)||(23349424-23349455)
chr4 (10-61)||(38000624-38000675)
[»] chr2 (21 HSPs)
chr2 (8-61)||(4481073-4481126)
chr2 (8-61)||(23231748-23231801)
chr2 (8-61)||(38620409-38620462)
chr2 (4-61)||(668005-668062)
chr2 (8-61)||(32422775-32422828)
chr2 (4-55)||(35048636-35048687)
chr2 (8-61)||(25424771-25424824)
chr2 (8-61)||(29546130-29546183)
chr2 (8-61)||(30241446-30241499)
chr2 (8-61)||(31440670-31440723)
chr2 (8-61)||(33867580-33867633)
chr2 (9-61)||(3329209-3329261)
chr2 (10-61)||(4592228-4592279)
chr2 (8-57)||(2656815-2656864)
chr2 (8-61)||(13142606-13142659)
chr2 (8-61)||(29155333-29155386)
chr2 (8-53)||(15162004-15162049)
chr2 (8-61)||(20937062-20937115)
chr2 (8-54)||(4289657-4289703)
chr2 (8-61)||(9205195-9205248)
chr2 (8-55)||(8027491-8027539)
[»] chr6 (13 HSPs)
chr6 (4-61)||(28769902-28769959)
chr6 (8-61)||(20691618-20691671)
chr6 (8-61)||(31070824-31070877)
chr6 (10-61)||(13534221-13534272)
chr6 (8-61)||(33328616-33328669)
chr6 (8-55)||(9062181-9062228)
chr6 (8-61)||(1329591-1329644)
chr6 (4-61)||(12429447-12429504)
chr6 (8-61)||(6337261-6337314)
chr6 (8-61)||(33331628-33331681)
chr6 (8-61)||(6938072-6938122)
chr6 (8-54)||(1221750-1221796)
chr6 (8-54)||(24447161-24447207)
[»] chr3 (31 HSPs)
chr3 (4-61)||(48080074-48080131)
chr3 (9-61)||(41923986-41924038)
chr3 (8-61)||(6408590-6408643)
chr3 (8-61)||(44792681-44792734)
chr3 (8-61)||(19618701-19618754)
chr3 (8-61)||(24987445-24987498)
chr3 (4-61)||(35688314-35688371)
chr3 (10-61)||(19873111-19873162)
chr3 (8-54)||(42096788-42096834)
chr3 (8-54)||(45079251-45079297)
chr3 (8-61)||(23299559-23299612)
chr3 (8-61)||(39352477-39352530)
chr3 (8-61)||(49359978-49360031)
chr3 (8-61)||(50508910-50508963)
chr3 (9-61)||(12905632-12905684)
chr3 (8-55)||(32995250-32995297)
chr3 (8-55)||(38694858-38694905)
chr3 (8-55)||(49374809-49374856)
chr3 (27-61)||(11671772-11671806)
chr3 (8-61)||(13735665-13735718)
chr3 (8-61)||(50481102-50481155)
chr3 (9-61)||(19454802-19454854)
chr3 (8-55)||(10085305-10085352)
chr3 (8-55)||(10192225-10192272)
chr3 (4-59)||(25467498-25467553)
chr3 (8-55)||(35732252-35732299)
chr3 (11-61)||(8340160-8340210)
chr3 (20-61)||(5041092-5041133)
chr3 (20-61)||(7940359-7940400)
chr3 (20-56)||(33118726-33118762)
chr3 (8-55)||(5908247-5908294)
[»] chr1 (48 HSPs)
chr1 (8-61)||(29054640-29054693)
chr1 (8-61)||(44327964-44328017)
chr1 (8-61)||(610730-610783)
chr1 (8-61)||(13312753-13312806)
chr1 (8-61)||(25815361-25815414)
chr1 (8-61)||(9222263-9222316)
chr1 (8-61)||(25059121-25059174)
chr1 (8-61)||(28220988-28221041)
chr1 (8-61)||(42069152-42069205)
chr1 (4-56)||(945496-945548)
chr1 (8-56)||(35978549-35978597)
chr1 (9-61)||(48964408-48964460)
chr1 (2-61)||(424585-424644)
chr1 (8-55)||(39026761-39026808)
chr1 (8-55)||(47662295-47662342)
chr1 (8-54)||(20414988-20415034)
chr1 (8-58)||(48985150-48985200)
chr1 (8-61)||(19506403-19506456)
chr1 (8-61)||(19996710-19996763)
chr1 (9-61)||(7842587-7842639)
chr1 (10-61)||(32835545-32835596)
chr1 (10-57)||(50099835-50099882)
chr1 (8-61)||(2978439-2978492)
chr1 (4-61)||(22580101-22580158)
chr1 (8-61)||(31646333-31646386)
chr1 (8-61)||(43634674-43634727)
chr1 (9-61)||(48662678-48662730)
chr1 (8-55)||(35739052-35739099)
chr1 (8-54)||(4893334-4893380)
chr1 (8-54)||(29185107-29185153)
chr1 (17-55)||(32133498-32133536)
chr1 (8-54)||(33362937-33362983)
chr1 (20-58)||(35949638-35949676)
chr1 (20-58)||(48796569-48796607)
chr1 (8-61)||(973529-973582)
chr1 (8-53)||(2433282-2433327)
chr1 (8-61)||(2975279-2975332)
chr1 (28-61)||(9472988-9473021)
chr1 (20-61)||(30623033-30623074)
chr1 (27-55)||(7121040-7121068)
chr1 (10-58)||(29426351-29426399)
chr1 (5-61)||(29512247-29512303)
chr1 (4-56)||(30489682-30489734)
chr1 (8-56)||(33794441-33794489)
chr1 (20-55)||(14106349-14106384)
chr1 (26-61)||(43634543-43634578)
chr1 (26-61)||(43634610-43634645)
chr1 (8-55)||(48514452-48514499)
[»] chr7 (31 HSPs)
chr7 (11-61)||(31454928-31454978)
chr7 (8-61)||(16567594-16567647)
chr7 (8-61)||(16598015-16598068)
chr7 (8-61)||(46181240-46181293)
chr7 (8-61)||(10066293-10066346)
chr7 (8-61)||(19805065-19805118)
chr7 (8-61)||(27398607-27398660)
chr7 (8-61)||(43702448-43702501)
chr7 (11-58)||(38469956-38470003)
chr7 (8-61)||(1876077-1876130)
chr7 (8-61)||(5023226-5023279)
chr7 (20-61)||(5924104-5924145)
chr7 (8-57)||(28067309-28067358)
chr7 (8-61)||(43224345-43224398)
chr7 (9-61)||(30738668-30738720)
chr7 (8-55)||(26299180-26299227)
chr7 (8-54)||(40789572-40789618)
chr7 (24-61)||(3362999-3363036)
chr7 (8-61)||(3551567-3551620)
chr7 (8-57)||(30391575-30391624)
chr7 (8-57)||(48558722-48558771)
chr7 (8-56)||(36074163-36074211)
chr7 (10-61)||(2959964-2960015)
chr7 (8-54)||(17172260-17172306)
chr7 (8-58)||(36072632-36072682)
chr7 (4-54)||(44300736-44300786)
chr7 (4-61)||(11244047-11244104)
chr7 (10-55)||(33978854-33978899)
chr7 (8-53)||(34152399-34152444)
chr7 (8-53)||(34174680-34174725)
chr7 (11-54)||(3809415-3809458)
[»] scaffold0938 (1 HSPs)
scaffold0938 (8-57)||(482-531)
[»] scaffold0062 (2 HSPs)
scaffold0062 (8-57)||(23921-23970)
scaffold0062 (8-57)||(34089-34138)
[»] scaffold0249 (1 HSPs)
scaffold0249 (4-57)||(20050-20103)
[»] scaffold0312 (1 HSPs)
scaffold0312 (2-61)||(5905-5964)
[»] scaffold0005 (1 HSPs)
scaffold0005 (4-61)||(240500-240557)
[»] scaffold0024 (1 HSPs)
scaffold0024 (4-55)||(110045-110096)
[»] scaffold0230 (1 HSPs)
scaffold0230 (8-54)||(26656-26702)


Alignment Details
Target: chr8 (Bit Score: 54; Significance: 1e-22; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 1e-22
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 24789533 - 24789586
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24789533 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 24789586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 8e-18
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 1376206 - 1376259
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  1376206 cctatgggtacctaagtgcccatacccgcacccattacccgcactttaactatg 1376259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 6109637 - 6109696
Alignment:
Q  2 caatatcctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||| ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||    
T  6109637 caataccctatgggtacctaagtgctcatacccgcacccattacccgcactttaactatg 6109696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 38020069 - 38020119
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaact 58  Q
    |||||||| || ||||||||||||||||||||||||||||||| |||||||    
T  38020069 cctatgggcacctaagtgtccatacccgcacccattacccgcagtttaact 38020119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 2621048 - 2620995
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||  |||||| ||||||| |||||||||||||||||||||||||||    
T  2621048 cctatgggtatctaagtgcccatacctgcacccattacccgcactttaactatg 2620995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 24891505 - 24891452
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||| |||||| |  ||||||||||||||||||||||||||||||||    
T  24891505 cctatgggtacctaagtgcctgtacccgcacccattacccgcactttaactatg 24891452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 25419288 - 25419341
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||||||||||| |||||| ||| ||||||||| ||||||||||||||    
T  25419288 cctatgggtacttaagtgcccatacacgctcccattacctgcactttaactatg 25419341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 25500169 - 25500220
Alignment:
Q  10 tatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||| |||||| |||||||||||||||||||| ||||||||| ||||    
T  25500169 tatgggtacctaagtgcccatacccgcacccattacctgcactttaaatatg 25500220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 222004 - 222057
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||| || ||||||  ||||||||||||||||||||||| ||||||||||    
T  222004 cctatgggcacctaagtgctcatacccgcacccattacccgcattttaactatg 222057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 691159 - 691212
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||| || ||||||  ||||||||||||||||||||||| ||||||||||    
T  691159 cctatgggcacctaagtgctcatacccgcacccattacccgcattttaactatg 691212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 735627 - 735680
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||| || ||||||  ||||||||||||||||||||||| ||||||||||    
T  735627 cctatgggcacctaagtgctcatacccgcacccattacccgcattttaactatg 735680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 859523 - 859576
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||| || ||||||  ||||||||||||||||||||||| ||||||||||    
T  859523 cctatgggcacctaagtgctcatacccgcacccattacccgcattttaactatg 859576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 1667277 - 1667326
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaac 57  Q
    ||||||||||| |||||| |||||||||||||||||| || |||||||||    
T  1667277 cctatgggtacctaagtgcccatacccgcacccattaacctcactttaac 1667326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 3616952 - 3616899
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||| |||||  |||||| |||||| |||||||||||||||||||||    
T  3616952 cctatgggtacctaagtacccatactcgcacctattacccgcactttaactatg 3616899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 19643601 - 19643548
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||  || ||| |||||||||| ||||||||||||||||||||||||    
T  19643601 cctatgggtatctaggtgcccatacccgcgcccattacccgcactttaactatg 19643548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 26561315 - 26561262
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||| |||| |||||| |||||||| |||||||||| |||||||||||||||    
T  26561315 cctatgagtacctaagtgcccatacccacacccattacacgcactttaactatg 26561262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 30801269 - 30801321
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||| |||||||||||||||| |||||||| || |||||||||||||    
T  30801269 cctatgggtacctaagtgtccatacccgtacccatta-ccacactttaactatg 30801321  T

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Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 2472368 - 2472316
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactat 60  Q
    ||||||||||| |||||| ||||||||||| |||| ||||| |||||||||||    
T  2472368 cctatgggtacataagtgcccatacccgcatccataacccgtactttaactat 2472316  T

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Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 7580078 - 7580120
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgca 50  Q
    |||||||| || |||||| ||||||||||||||||||||||||    
T  7580078 cctatgggcacctaagtgcccatacccgcacccattacccgca 7580120  T

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Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 20216224 - 20216274
Alignment:
Q  4 atatcctatgggtacttaagtgtccatacccgcacccattacccgcacttt 54  Q
    ||||| |||||| ||||||||| ||||||| |||||| |||||||||||||    
T  20216224 atatcttatgggcacttaagtgcccatacctgcacccgttacccgcacttt 20216274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 20235822 - 20235872
Alignment:
Q  4 atatcctatgggtacttaagtgtccatacccgcacccattacccgcacttt 54  Q
    ||||| |||||| ||||||||| ||||||| |||||| |||||||||||||    
T  20235822 atatcttatgggcacttaagtgcccatacctgcacccgttacccgcacttt 20235872  T

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Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 7057626 - 7057679
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||| ||||||  ||||| || ||||||||| |||||||||||||||    
T  7057626 cctatgggtacctaagtgcacatactcgtacccattactcgcactttaactatg 7057679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 57
Target Start/End: Complemental strand, 39221630 - 39221601
Alignment:
Q  28 catacccgcacccattacccgcactttaac 57  Q
    ||||||||||||||||||||||||||||||    
T  39221630 catacccgcacccattacccgcactttaac 39221601  T

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Target: chr5 (Bit Score: 54; Significance: 1e-22; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 1e-22
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 14645336 - 14645389
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14645336 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 14645389  T

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Target: chr5; HSP #2
Raw Score: 50; E-Value: 3e-20
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 41616605 - 41616658
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  41616605 cctatgggtacttaagtgcccatacccgcacccattacccgcactttaactatg 41616658  T

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Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 1060965 - 1061022
Alignment:
Q  4 atatcctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||||||| ||| || ||||||||||||||||||| |||||||||||||||    
T  1060965 atatcctatgggtacctaattgcccatacccgcacccattacacgcactttaactatg 1061022  T

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Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 36470536 - 36470484
Alignment:
Q  9 ctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||| |||||    
T  36470536 ctatgggtacctaagtgtccatacccgcacccattaccagcactttagctatg 36470484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 57
Target Start/End: Original strand, 16186791 - 16186838
Alignment:
Q  10 tatgggtacttaagtgtccatacccgcacccattacccgcactttaac 57  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||    
T  16186791 tatgggtacttaagtgcccatacacgcacccattacccgcactttaac 16186838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 35853543 - 35853590
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttta 55  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||    
T  35853543 cctatgggcacttaagtgcccatacccgcacccattacccgcacttta 35853590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 7978052 - 7978105
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||  ||||||  ||||||||||||||||||||||||||||||||||    
T  7978052 cctatgggtatctaagtgctcatacccgcacccattacccgcactttaactatg 7978105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 32302412 - 32302457
Alignment:
Q  10 tatgggtacttaagtgtccatacccgcacccattacccgcacttta 55  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||    
T  32302412 tatgggcacttaagtgcccatacccgcacccattacccgcacttta 32302457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 41983270 - 41983322
Alignment:
Q  9 ctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||| ||||||  |||||| |||||||||||||||||||||||||||    
T  41983270 ctatgggtacctaagtgctcatacctgcacccattacccgcactttaactatg 41983322  T

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Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 14088295 - 14088342
Alignment:
Q  14 ggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||| |||||| ||||||||| |||||||||||||||||||||||||    
T  14088295 ggtacctaagtgcccatacccgtacccattacccgcactttaactatg 14088342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 29455814 - 29455865
Alignment:
Q  10 tatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||  |||||| ||||||||||||||||||||| |||||||||||||    
T  29455814 tatgggtatctaagtgcccatacccgcacccattacccacactttaactatg 29455865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 15674066 - 15674016
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaact 58  Q
    |||||||| || ||||||||||||||||||||||||| ||||| |||||||    
T  15674066 cctatgggcacctaagtgtccatacccgcacccattatccgcaatttaact 15674016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 19254574 - 19254528
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttt 54  Q
    |||||| | ||||||||| ||||||||||||||||||||||||||||    
T  19254574 cctatgagcacttaagtgcccatacccgcacccattacccgcacttt 19254528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 19549374 - 19549424
Alignment:
Q  11 atgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||| |||||  |||||||| ||||||||||||||||||||||||||    
T  19549374 atgggtacctaagtacccatacccacacccattacccgcactttaactatg 19549424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 639448 - 639399
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaac 57  Q
    |||||||||||||||||| ||||||||||| | ||||||||||| |||||    
T  639448 cctatgggtacttaagtgcccatacccgcatcaattacccgcacattaac 639399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 18595378 - 18595434
Alignment:
Q  4 atatcctatgggtacttaagtgtccatacccgcacccattacccgcactttaactat 60  Q
    ||||||||| ||||  |||||| | |||||||||||||||| |||||||||||||||    
T  18595378 atatcctataggtatctaagtgcctatacccgcacccattatccgcactttaactat 18595434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 22632329 - 22632278
Alignment:
Q  10 tatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||| ||||||  |||||| |||| ||||||||||||||||||||||    
T  22632329 tatgggtacctaagtgatcatacctgcactcattacccgcactttaactatg 22632278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 4902027 - 4901985
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgca 50  Q
    |||||||| || |||||| ||||||||||||||||||||||||    
T  4902027 cctatgggcacctaagtgcccatacccgcacccattacccgca 4901985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 33347162 - 33347112
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaact 58  Q
    |||||||| || ||||||||||||||||||||||||| | ||| |||||||    
T  33347162 cctatgggcacctaagtgtccatacccgcacccattatctgcaatttaact 33347112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 34718870 - 34718824
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttt 54  Q
    |||||||| |||||||||  ||||||| |||||||||||||||||||    
T  34718870 cctatgggcacttaagtgctcatacccccacccattacccgcacttt 34718824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 41692554 - 41692508
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttt 54  Q
    |||||||| |||||||||  ||||||| |||||||||||||||||||    
T  41692554 cctatgggcacttaagtgctcatacccccacccattacccgcacttt 41692508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 6277901 - 6277853
Alignment:
Q  8 cctatgggtacttaagtgtccataccc--gcacccattacccgcacttt 54  Q
    |||||||| ||||||||| ||||||||  ||||||||||||||||||||    
T  6277901 cctatgggcacttaagtgcccatacccccgcacccattacccgcacttt 6277853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 14087685 - 14087737
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||  |||||| ||||||||||| |||||| ||||||||||||||||    
T  14087685 cctatgggtatctaagtgcccatacccgca-ccattatccgcactttaactatg 14087737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 61
Target Start/End: Complemental strand, 24489138 - 24489106
Alignment:
Q  29 atacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||||||||||| |||||||||||||    
T  24489138 atacccgcacccattacccacactttaactatg 24489106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 61
Target Start/End: Complemental strand, 31149760 - 31149728
Alignment:
Q  29 atacccgcacccattacccgcactttaactatg 61  Q
    |||||||||||||||| ||||||||||||||||    
T  31149760 atacccgcacccattatccgcactttaactatg 31149728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 30774828 - 30774875
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttta 55  Q
    ||||| || ||||||||| | ||||||||||||| |||||||||||||    
T  30774828 cctataggcacttaagtgcctatacccgcacccactacccgcacttta 30774875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 1e-22; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 1e-22
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 52595575 - 52595628
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52595575 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 52595628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 3e-20
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 3387296 - 3387243
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3387296 cctatgggtacttaagtgcccatacccgcacccattacccgcactttaactatg 3387243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 8e-18
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 29149096 - 29149043
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  29149096 cctatgggtacttaagtacccatacccgcacccattacccgcactttaactatg 29149043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 8e-18
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 33983163 - 33983220
Alignment:
Q  4 atatcctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||    
T  33983163 atatcctatgggtatctaagtgcccatacccgcacccattacccgcactttaactatg 33983220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 8e-18
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 41003346 - 41003403
Alignment:
Q  4 atatcctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||    
T  41003346 atatcctatgggtacctaagtgctcatacccgcacccattacccgcactttaactatg 41003403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 3095047 - 3094994
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||| |||| |||||| |||||||||||||||||||||||||||||||||||    
T  3095047 cctatgagtacctaagtgcccatacccgcacccattacccgcactttaactatg 3094994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 21075860 - 21075913
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||| |||||| ||||||||||| |||||||||||||||||||||||    
T  21075860 cctatgggtacctaagtgcccatacccgcatccattacccgcactttaactatg 21075913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 22313439 - 22313382
Alignment:
Q  4 atatcctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||||||  ||||||||||||||||||| ||||| ||||||||||||||||    
T  22313439 atatcctatgggtatctaagtgtccatacccgcactcattatccgcactttaactatg 22313382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 32655602 - 32655549
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||||||| ||  |||||||||||||||||||||||||||||||||||    
T  32655602 cctatgggtacttaggtacccatacccgcacccattacccgcactttaactatg 32655549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 39804300 - 39804353
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||| |||||    
T  39804300 cctatgggtacttaagtacccatacccgcacccattacccgcactttagctatg 39804353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 42053344 - 42053295
Alignment:
Q  12 tgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||    
T  42053344 tgggtacttaagtacccatacccgcacccattacccgcactttaactatg 42053295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 52180858 - 52180805
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||||||| ||  |||||||||||||||||||||||||||||||||||    
T  52180858 cctatgggtacttaggtacccatacccgcacccattacccgcactttaactatg 52180805  T

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Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 54979226 - 54979173
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  54979226 cctatgggtacttaagtacacatacccgcacccattacccgcactttaactatg 54979173  T

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Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 1758060 - 1758013
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttta 55  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||    
T  1758060 cctatgggtacctaagtgcccatacccgcacccattacccgcacttta 1758013  T

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Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 8806006 - 8805959
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttta 55  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||    
T  8806006 cctatgggcacttaagtgcccatacccgcacccattacccgcacttta 8805959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 26340315 - 26340264
Alignment:
Q  4 atatcctatgggtacttaagtgtccatacccgcacccattacccgcacttta 55  Q
    |||||||||||| ||||||||  |||||||||||||||||||||||||||||    
T  26340315 atatcctatgggcacttaagtacccatacccgcacccattacccgcacttta 26340264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 2225034 - 2224984
Alignment:
Q  11 atgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||| ||||||  ||||||||||||||||||||||||||||||||||    
T  2225034 atgggtacctaagtgctcatacccgcacccattacccgcactttaactatg 2224984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 2721313 - 2721260
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||| | |||| ||||||||||| |||||||||||||||||||||||    
T  2721313 cctatgggtacctcagtgcccatacccgcatccattacccgcactttaactatg 2721260  T

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Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 12185809 - 12185862
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||| | |||| ||||||||||| |||||||||||||||||||||||    
T  12185809 cctatgggtacctcagtgcccatacccgcatccattacccgcactttaactatg 12185862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 12187801 - 12187854
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||| | |||| ||||||||||| |||||||||||||||||||||||    
T  12187801 cctatgggtacctcagtgcccatacccgcatccattacccgcactttaactatg 12187854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 14576818 - 14576875
Alignment:
Q  4 atatcctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||||||| | |||| ||||||||||| |||||| ||||||||||||||||    
T  14576818 atatcctatgggtacctcagtgcccatacccgcatccattatccgcactttaactatg 14576875  T

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Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 22829768 - 22829821
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||| || |||||| |||||||||||||||||||||||| ||||||||||    
T  22829768 cctatgggcacctaagtgcccatacccgcacccattacccgcattttaactatg 22829821  T

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Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 31786444 - 31786497
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||| || |||||||| |||||||||||||||||||||| ||||||||||    
T  31786444 cctatgggcacctaagtgtctatacccgcacccattacccgcattttaactatg 31786497  T

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Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 42755371 - 42755424
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||| ||| ||||||  ||||||||||||||||||||||||||||||||||    
T  42755371 cctatggatacctaagtgcacatacccgcacccattacccgcactttaactatg 42755424  T

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Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 25938399 - 25938447
Alignment:
Q  12 tgggtacttaagtgtccatacccgcacccattacccgcactttaactat 60  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||||    
T  25938399 tgggtacttaagtacccatacccgcacccattaccagcactttaactat 25938447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 41780683 - 41780734
Alignment:
Q  4 atatcctatgggtacttaagtgtccatacccgcacccattacccgcacttta 55  Q
    ||||| |||||| |||||||||||||||||||||||||||||  ||||||||    
T  41780683 atatcttatgggcacttaagtgtccatacccgcacccattacatgcacttta 41780734  T

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Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 33733407 - 33733453
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttt 54  Q
    |||||||| ||||||||| ||||||| ||||||||||||||||||||    
T  33733407 cctatgggcacttaagtgcccatacctgcacccattacccgcacttt 33733453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 28234258 - 28234206
Alignment:
Q  2 caatatcctatgggtacttaagtgtccatacccgcacccattacccgcacttta 55  Q
    ||||| |||||||| ||||| ||| |||||||||||||||||||||||||||||    
T  28234258 caataccctatgggcactta-gtgcccatacccgcacccattacccgcacttta 28234206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 29994346 - 29994403
Alignment:
Q  4 atatcctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||| |||||||||| ||| ||||| |||| ||| |||||||||||||||||||||||    
T  29994346 atattctatgggtacctaaatgtccgtacctgcatccattacccgcactttaactatg 29994403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 56445241 - 56445196
Alignment:
Q  10 tatgggtacttaagtgtccatacccgcacccattacccgcacttta 55  Q
    |||||| ||||||||| |||||| ||||||||||||||||||||||    
T  56445241 tatgggcacttaagtgcccatactcgcacccattacccgcacttta 56445196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 31713714 - 31713662
Alignment:
Q  9 ctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||| || |||||||||||||||||||| |||||||||| ||||| ||||    
T  31713714 ctatgggcacctaagtgtccatacccgcacctattacccgcattttaattatg 31713662  T

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Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 22306881 - 22306830
Alignment:
Q  10 tatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||| ||||| ||| ||||||||||||| |||||||||| ||||||||||    
T  22306881 tatgggcacttaggtgcccatacccgcaccaattacccgcattttaactatg 22306830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 7262054 - 7262092
Alignment:
Q  20 taagtgtccatacccgcacccattacccgcactttaact 58  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  7262054 taagtgcccatacccgcacccattacccgcagtttaact 7262092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 11034726 - 11034776
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaact 58  Q
    |||||||| || |||||| |||||||||||||||||| ||||| |||||||    
T  11034726 cctatgggcacctaagtgcccatacccgcacccattatccgcagtttaact 11034776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 45097592 - 45097638
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttt 54  Q
    |||||||| || |||||| | ||||||||||||||||||||||||||    
T  45097592 cctatgggcacctaagtgcctatacccgcacccattacccgcacttt 45097638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 46080748 - 46080794
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttt 54  Q
    |||||| | |||||||||||||||||||||| |||||||| ||||||    
T  46080748 cctatgagcacttaagtgtccatacccgcactcattacccacacttt 46080794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 52802345 - 52802299
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttt 54  Q
    |||||||| |||||||||  ||||||| |||||||||||||||||||    
T  52802345 cctatgggcacttaagtgctcatacccccacccattacccgcacttt 52802299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 53140641 - 53140687
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttt 54  Q
    |||||||| |||||||||  ||||||| |||||||||||||||||||    
T  53140641 cctatgggcacttaagtgctcatacccccacccattacccgcacttt 53140687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 652275 - 652328
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||| |||||| || ||||||||| |||||||| |||||||| ||||    
T  652275 cctatgggtacctaagtgcccttacccgcactcattacccacactttaattatg 652328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 44293065 - 44293024
Alignment:
Q  20 taagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||  |||||||||||||||||| |||||||||||||    
T  44293065 taagtgtctgtacccgcacccattacccacactttaactatg 44293024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 61
Target Start/End: Complemental strand, 23349455 - 23349424
Alignment:
Q  30 tacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||||||||||||| ||||||||||    
T  23349455 tacccgcacccattacccgcattttaactatg 23349424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 38000624 - 38000675
Alignment:
Q  10 tatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||| |||||| ||||||||||| |||||| | | ||||||||||||    
T  38000624 tatgggtacctaagtgcccatacccgcatccattatctgaactttaactatg 38000675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 1e-22; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 1e-22
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 4481073 - 4481126
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4481073 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 4481126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 3e-20
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 23231748 - 23231801
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23231748 cctatgggtacttaagtgcccatacccgcacccattacccgcactttaactatg 23231801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 3e-20
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 38620409 - 38620462
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  38620409 cctatgggtacttaagtatccatacccgcacccattacccgcactttaactatg 38620462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 8e-18
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 668062 - 668005
Alignment:
Q  4 atatcctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||    
T  668062 atatcctatgggtacctaagtgcccatacccgcacccattatccgcactttaactatg 668005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 8e-18
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 32422828 - 32422775
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  32422828 cctatgggtacttaagtacccatacccgcacccattacccgcactttaactatg 32422775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 35048636 - 35048687
Alignment:
Q  4 atatcctatgggtacttaagtgtccatacccgcacccattacccgcacttta 55  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  35048636 atatcctatgggcacttaagtgcccatacccgcacccattacccgcacttta 35048687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 25424771 - 25424824
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||||||| ||  |||||||||||||||||||||||||||||||||||    
T  25424771 cctatgggtacttaggtacccatacccgcacccattacccgcactttaactatg 25424824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 29546183 - 29546130
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||| || ||||||||||||||||||||||||||||||| ||||||||||    
T  29546183 cctatgggcacctaagtgtccatacccgcacccattacccgcattttaactatg 29546130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 30241446 - 30241499
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||| |||||| |||||| ||||||||||||||||||||||||||||    
T  30241446 cctatgggtacctaagtgcccatactcgcacccattacccgcactttaactatg 30241499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 31440723 - 31440670
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||| |||| |||||| |||||||||||||||||||||||||||||||||||    
T  31440723 cctatgtgtacctaagtgcccatacccgcacccattacccgcactttaactatg 31440670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 33867633 - 33867580
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||||||| ||  |||||||||||||||||||||||||||||||||||    
T  33867633 cctatgggtacttaggtacccatacccgcacccattacccgcactttaactatg 33867580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 3329209 - 3329261
Alignment:
Q  9 ctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  3329209 ctatgggtacctaagtgtctatacccgcacccattacccacactttaactatg 3329261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 4592279 - 4592228
Alignment:
Q  10 tatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||| ||||||||||| | ||||||||||||||||||||||||||||    
T  4592279 tatgggtacctaagtgtccatgctcgcacccattacccgcactttaactatg 4592228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 2656815 - 2656864
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaac 57  Q
    ||||||||||||||||||||||||||| ||| ||||||| ||||||||||    
T  2656815 cctatgggtacttaagtgtccatacccacacacattacctgcactttaac 2656864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 13142659 - 13142606
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||| ||||||||||  ||||||||||| |||||||||||||||||||||||    
T  13142659 cctatgagtacttaagtacccatacccgcatccattacccgcactttaactatg 13142606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 29155333 - 29155386
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||||  ||||| || ||||||||||||||||||||||||||||||||    
T  29155333 cctatgggtacccaagtgcccgtacccgcacccattacccgcactttaactatg 29155386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 15162004 - 15162049
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactt 53  Q
    |||||||| ||||||||| ||||||||||||||||||||| |||||    
T  15162004 cctatgggcacttaagtgcccatacccgcacccattacccacactt 15162049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 20937062 - 20937115
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||| |||||||||||||||||||  ||||||| |||||||| ||||    
T  20937062 cctatgggtacctaagtgtccatacccgcacttattacccacactttaattatg 20937115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 4289657 - 4289703
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttt 54  Q
    |||||||| |||||||||  ||||||| |||||||||||||||||||    
T  4289657 cctatgggcacttaagtgctcatacccccacccattacccgcacttt 4289703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 9205195 - 9205248
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||| |||| |||||| ||||||||||| |||||| ||||| ||||||||||    
T  9205195 cctatgagtacctaagtgcccatacccgcatccattatccgcattttaactatg 9205248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 8027539 - 8027491
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccatta-cccgcacttta 55  Q
    |||||||| ||||||||  |||||||||||||||||| |||||||||||    
T  8027539 cctatgggcacttaagtacccatacccgcacccattaccccgcacttta 8027491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 3e-20; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 3e-20
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 28769902 - 28769959
Alignment:
Q  4 atatcctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  28769902 atatcctatgggtacctaagtgtccatacccgcacccattacccgcactttagctatg 28769959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 8e-18
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 20691671 - 20691618
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  20691671 cctatgggtacctaagtgcccatacccgcacccattacccgcactttaactatg 20691618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 8e-18
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 31070824 - 31070877
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  31070824 cctatgggtacctaagtgcccatacccgcacccattacccgcactttaactatg 31070877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 13534272 - 13534221
Alignment:
Q  10 tatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  13534272 tatgggtacttaagtacccatacccgcacccattacccgcactttaactatg 13534221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 33328616 - 33328669
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||||||||||  |||||||||||| ||||||||||||||||||||||    
T  33328616 cctatgggtacttaagtaaccatacccgcactcattacccgcactttaactatg 33328669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 9062228 - 9062181
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttta 55  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||    
T  9062228 cctatgggcacttaagtgcccatacccgcacccattacccgcacttta 9062181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 1329644 - 1329591
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||| ||| |||||| |||||||| ||||||||||||||||||||||||||    
T  1329644 cctatggatacctaagtgcccatacccacacccattacccgcactttaactatg 1329591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 12429447 - 12429504
Alignment:
Q  4 atatcctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||| ||  ||||||||||||||| ||| ||||||||||||||||||||||    
T  12429447 atatcctatggttatctaagtgtccatacccacactcattacccgcactttaactatg 12429504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 6337261 - 6337314
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||| |||||| ||||||||||||| ||||||| ||||||| |||||    
T  6337261 cctatgggtacctaagtgcccatacccgcacctattacccacactttagctatg 6337314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 33331628 - 33331681
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||||||| |   ||||||||||| ||||||||||||||||||||||    
T  33331628 cctatgggtacttaattactcatacccgcactcattacccgcactttaactatg 33331681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 6938072 - 6938122
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||| |||||| ||||||||||||||   ||||||||||||||||||    
T  6938072 cctatgggtacctaagtgcccatacccgcaccc---acccgcactttaactatg 6938122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 1221796 - 1221750
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttt 54  Q
    |||||||| |||||||||  ||||||| |||||||||||||||||||    
T  1221796 cctatgggcacttaagtgctcatacccccacccattacccgcacttt 1221750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 24447207 - 24447161
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttt 54  Q
    |||||||| |||||||||  ||||||| |||||||||||||||||||    
T  24447207 cctatgggcacttaagtgctcatacccccacccattacccgcacttt 24447161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 3e-20; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 3e-20
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 48080074 - 48080131
Alignment:
Q  4 atatcctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  48080074 atatcctatgggtacctaagtgtccatacccgcactcattacccgcactttaactatg 48080131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 1e-19
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 41923986 - 41924038
Alignment:
Q  9 ctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  41923986 ctatgggtacttaagtgtctatacccgcacccattacccgcactttaactatg 41924038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 8e-18
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 6408590 - 6408643
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  6408590 cctatgggtacctaagtgcccatacccgcacccattacccgcactttaactatg 6408643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 8e-18
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 44792734 - 44792681
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  44792734 cctatgggtacttaagtacccatacccgcacccattacccgcactttaactatg 44792681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 19618701 - 19618754
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||| ||| |||||| |||||||||||||||||||||||||||||||||||    
T  19618701 cctatggatacctaagtgcccatacccgcacccattacccgcactttaactatg 19618754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 24987498 - 24987445
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  24987498 cctatgggtacttaagtacccatacccgcatccattacccgcactttaactatg 24987445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 35688314 - 35688371
Alignment:
Q  4 atatcctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||||| || |||||| |||||||||||||||||||||||| ||||||||||    
T  35688314 atatcctatgggcacctaagtgcccatacccgcacccattacccgcattttaactatg 35688371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 19873111 - 19873162
Alignment:
Q  10 tatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||| |||||| |||||||||||||||||||| ||||||||||||||    
T  19873111 tatgggtacctaagtgcccatacccgcacccattacctgcactttaactatg 19873162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 42096834 - 42096788
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttt 54  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||    
T  42096834 cctatgggcacttaagtgcccatacccgcacccattacccgcacttt 42096788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 45079297 - 45079251
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttt 54  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||    
T  45079297 cctatgggcacttaagtgcccatacccgcacccattacccgcacttt 45079251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 23299612 - 23299559
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||  |||||| |||||||||||||||||||||||| ||||||||||    
T  23299612 cctatgggtatctaagtgcccatacccgcacccattacccgcattttaactatg 23299559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 39352477 - 39352530
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||| |||| |||||| |||||||| ||||||||||||||||||||||||||    
T  39352477 cctatgagtacctaagtgcccatacccacacccattacccgcactttaactatg 39352530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 49359978 - 49360031
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||| | |||  |||||||||||||||||||||||||||||||||||    
T  49359978 cctatgggtacctcagtacccatacccgcacccattacccgcactttaactatg 49360031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 50508963 - 50508910
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||| ||||||||| ||||||| ||||||| |||||||||||||||||||    
T  50508963 cctatgggaacttaagtgcccatacctgcacccactacccgcactttaactatg 50508910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 12905632 - 12905684
Alignment:
Q  9 ctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||| |||||||| |||| |||||||||||| |||||||||||||||    
T  12905632 ctatgggtacctaagtgtctatactcgcacccattactcgcactttaactatg 12905684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 32995250 - 32995297
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttta 55  Q
    |||||||| |||||||||  ||||||||||||||||||||||||||||    
T  32995250 cctatgggcacttaagtgctcatacccgcacccattacccgcacttta 32995297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 38694905 - 38694858
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttta 55  Q
    |||||||  |||||||||||||||||||||| ||||||||||||||||    
T  38694905 cctatggacacttaagtgtccatacccgcactcattacccgcacttta 38694858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 49374809 - 49374856
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttta 55  Q
    |||||||| |||||||||  ||||||||||||||||||||||||||||    
T  49374809 cctatgggcacttaagtgctcatacccgcacccattacccgcacttta 49374856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 11671772 - 11671806
Alignment:
Q  27 ccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||||||||||||||||||||||||||||    
T  11671772 ccatacccgcacccattacccgcactttaactatg 11671806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 13735718 - 13735665
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||| | |||| | ||||||||||||||||| |||||||||||||||    
T  13735718 cctatgggtacctcagtgccgatacccgcacccattactcgcactttaactatg 13735665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 50481155 - 50481102
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||| | |||| |||||||||||  ||||||||||||||||||||||    
T  50481155 cctatgggtacctcagtgcccatacccgcattcattacccgcactttaactatg 50481102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 19454802 - 19454854
Alignment:
Q  9 ctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||| ||||||||||||||| | ||||||||||||| || ||||||||||    
T  19454802 ctatgggcacttaagtgtccatatctgcacccattacccacattttaactatg 19454854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 10085352 - 10085305
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttta 55  Q
    ||||||||||||||||||  ||||||| |||| |||||||||||||||    
T  10085352 cctatgggtacttaagtgctcataccctcacctattacccgcacttta 10085305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 10192272 - 10192225
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttta 55  Q
    ||||||||||||||||||  ||||||| |||| |||||||||||||||    
T  10192272 cctatgggtacttaagtgctcataccctcacctattacccgcacttta 10192225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 25467498 - 25467553
Alignment:
Q  4 atatcctatgggtacttaagtgtccatacccgcacccattacccgcactttaacta 59  Q
    ||||| ||||||||  ||||||  ||||||||||||||||||||||| ||||||||    
T  25467498 atatcttatgggtatctaagtgctcatacccgcacccattacccgcaatttaacta 25467553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 35732252 - 35732299
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttta 55  Q
    |||||||| ||||||||| |||||||||||| |||||||| |||||||    
T  35732252 cctatgggcacttaagtgcccatacccgcactcattacccacacttta 35732299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 8340160 - 8340210
Alignment:
Q  11 atgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||| || |||||| ||||||||||||| |||||||||| ||||||||||    
T  8340160 atgggcacctaagtgcccatacccgcacctattacccgcattttaactatg 8340210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 5041133 - 5041092
Alignment:
Q  20 taagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||| ||||||| |||||||||| ||||||||||||||||    
T  5041133 taagtgcccatacctgcacccattatccgcactttaactatg 5041092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 7940359 - 7940400
Alignment:
Q  20 taagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||| ||||||||||| ||||||||||||||||| |||||    
T  7940359 taagtgcccatacccgcatccattacccgcactttagctatg 7940400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 33118726 - 33118762
Alignment:
Q  20 taagtgtccatacccgcacccattacccgcactttaa 56  Q
    |||||||||||||||  ||||||||||||||||||||    
T  33118726 taagtgtccatacccatacccattacccgcactttaa 33118762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 5908247 - 5908294
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttta 55  Q
    |||||| | ||||||||| |||||||| |||| |||||||||||||||    
T  5908247 cctatgagcacttaagtgcccatacccacaccaattacccgcacttta 5908294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 3e-20; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 3e-20
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 29054693 - 29054640
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29054693 cctatgggtacctaagtgtccatacccgcacccattacccgcactttaactatg 29054640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 3e-20
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 44328017 - 44327964
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  44328017 cctatgggtacctaagtgtccatacccgcacccattacccgcactttaactatg 44327964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 8e-18
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 610730 - 610783
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  610730 cctatgggtacttaagtgcacatacccgcacccattacccgcactttaactatg 610783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 8e-18
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 13312753 - 13312806
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  13312753 cctatgggtacttaagtacccatacccgcacccattacccgcactttaactatg 13312806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 8e-18
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 25815414 - 25815361
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  25815414 cctatgggtacttaagtacccatacccgcacccattacccgcactttaactatg 25815361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 9222263 - 9222316
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||||||||||  |||||||| ||||||||||||||||||||||||||    
T  9222263 cctatgggtacttaagtacccatacccacacccattacccgcactttaactatg 9222316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 25059121 - 25059174
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||  |||||| |||||||||||||||||||||||||||||||||||    
T  25059121 cctatgggtatctaagtgcccatacccgcacccattacccgcactttaactatg 25059174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 28220988 - 28221041
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||  |||||| |||||||||||||||||||||||||||||||||||    
T  28220988 cctatgggtatctaagtgcccatacccgcacccattacccgcactttaactatg 28221041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 42069205 - 42069152
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||  |||||| |||||||||||||||||||||||||||||||||||    
T  42069205 cctatgggtatctaagtgcccatacccgcacccattacccgcactttaactatg 42069152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 945496 - 945548
Alignment:
Q  4 atatcctatgggtacttaagtgtccatacccgcacccattacccgcactttaa 56  Q
    ||||||||||||||  |||||| ||||||||||||||||||||||||||||||    
T  945496 atatcctatgggtatctaagtgcccatacccgcacccattacccgcactttaa 945548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.000000000000007
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 35978597 - 35978549
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaa 56  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  35978597 cctatgggtacctaagtgcccatacccgcacccattacccgcactttaa 35978549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 48964460 - 48964408
Alignment:
Q  9 ctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||| | |||| |||||||||||||||||||||||||||||||||||    
T  48964460 ctatgggtacctcagtgcccatacccgcacccattacccgcactttaactatg 48964408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 424585 - 424644
Alignment:
Q  2 caatatcctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||  ||||||||||||| ||||||| ||||||||||||| |||||||||||||    
T  424585 caatatcctgcgggtacttaagtgcccatacctgcacccattacccacactttaactatg 424644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 39026761 - 39026808
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttta 55  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||    
T  39026761 cctatgggcacttaagtgcccatacccgcacccattacccgcacttta 39026808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 47662295 - 47662342
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttta 55  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||    
T  47662295 cctatgggcacttaagtgcccatacccgcacccattacccgcacttta 47662342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 20414988 - 20415034
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttt 54  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||    
T  20414988 cctatgggcacttaagtggccatacccgcacccattacccgcacttt 20415034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 48985150 - 48985200
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaact 58  Q
    |||||||| ||||||||||||||||| |||||||||||||||| |||||||    
T  48985150 cctatgggcacttaagtgtccatacctgcacccattacccgcattttaact 48985200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 19506403 - 19506456
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||  |||||| ||||||||||||||||||||| |||||||||||||    
T  19506403 cctatgggtatctaagtgcccatacccgcacccattacccacactttaactatg 19506456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 19996763 - 19996710
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||  ||||||| ||||||||||||||||||||||||||| ||||||    
T  19996763 cctatgggtatctaagtgttcatacccgcacccattacccgcactttgactatg 19996710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 7842587 - 7842639
Alignment:
Q  9 ctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||  |||||| |||||||||||| ||||||||||||||||||||||    
T  7842587 ctatgggtatctaagtgcccatacccgcactcattacccgcactttaactatg 7842639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 32835596 - 32835545
Alignment:
Q  10 tatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||| ||||||  ||||||||||| ||||||||||||||||||||||    
T  32835596 tatgggtacctaagtgctcatacccgcactcattacccgcactttaactatg 32835545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 57
Target Start/End: Original strand, 50099835 - 50099882
Alignment:
Q  10 tatgggtacttaagtgtccatacccgcacccattacccgcactttaac 57  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  50099835 tatgggcacttaagtgcccatacccgcacccattacctgcactttaac 50099882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 2978439 - 2978492
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||  |||||| |||||||||||| |||||||| |||||||||||||    
T  2978439 cctatgggtatctaagtgcccatacccgcacacattacccccactttaactatg 2978492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 22580158 - 22580101
Alignment:
Q  4 atatcctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||||||| | |||| ||||||||||||| |||| ||||| ||||||||||    
T  22580158 atatcctatgggtaccttagtgcccatacccgcaccaattatccgcaatttaactatg 22580101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 31646386 - 31646333
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||| || |||||| |||||||||||||| ||||||||| ||||||||||    
T  31646386 cctatgggcacctaagtgcccatacccgcacccgttacccgcattttaactatg 31646333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 43634727 - 43634674
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||| |||||||||||| |||||| ||| ||||||||||| ||||||    
T  43634727 cctatgggtacctaagtgtccatatccgcactcatcacccgcacttttactatg 43634674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 48662678 - 48662730
Alignment:
Q  9 ctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||| || ||||||| ||||||||||||||||||||||| ||||| ||||    
T  48662678 ctatgggcacctaagtgttcatacccgcacccattacccgcattttaattatg 48662730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 35739099 - 35739052
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttta 55  Q
    |||||||| ||||||||| ||||| |||||||||| ||||||||||||    
T  35739099 cctatgggcacttaagtgcccatatccgcacccatcacccgcacttta 35739052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 4893380 - 4893334
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttt 54  Q
    |||||||| |||||||||  ||||||| |||||||||||||||||||    
T  4893380 cctatgggcacttaagtgctcatacccccacccattacccgcacttt 4893334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 29185107 - 29185153
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttt 54  Q
    |||||||| |||||||||  ||||||| |||||||||||||||||||    
T  29185107 cctatgggcacttaagtgctcatacccccacccattacccgcacttt 29185153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 55
Target Start/End: Original strand, 32133498 - 32133536
Alignment:
Q  17 acttaagtgtccatacccgcacccattacccgcacttta 55  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  32133498 acttaagtgcccatacccgcactcattacccgcacttta 32133536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 33362983 - 33362937
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttt 54  Q
    |||||||| |||||||||  ||||||| |||||||||||||||||||    
T  33362983 cctatgggcacttaagtgctcatacccccacccattacccgcacttt 33362937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 35949676 - 35949638
Alignment:
Q  20 taagtgtccatacccgcacccattacccgcactttaact 58  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  35949676 taagtgcccatacccgcacccattacccgcagtttaact 35949638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 48796569 - 48796607
Alignment:
Q  20 taagtgtccatacccgcacccattacccgcactttaact 58  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  48796569 taagtgcccatacccgcacccattacccgcagtttaact 48796607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 973529 - 973582
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||| ||||||  |||| |||||||||||| ||||||||||| ||||    
T  973529 cctatgggtacctaagtgcacatatccgcacccattatccgcactttaattatg 973582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 2433282 - 2433327
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactt 53  Q
    ||||||||||| |||||| |||||||| |||||||||||| |||||    
T  2433282 cctatgggtacctaagtgcccataccctcacccattacccacactt 2433327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 2975332 - 2975279
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||  |||||  |||||||||||| |||||||| |||||||||||||    
T  2975332 cctatgggtatctaagtacccatacccgcacacattacccccactttaactatg 2975279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 9472988 - 9473021
Alignment:
Q  28 catacccgcacccattacccgcactttaactatg 61  Q
    |||||||||||||||||| |||||||||||||||    
T  9472988 catacccgcacccattactcgcactttaactatg 9473021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 30623074 - 30623033
Alignment:
Q  20 taagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||||||||||||||||||||   ||||||||||||    
T  30623074 taagtgtccatacccgcacccattacctatactttaactatg 30623033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 55
Target Start/End: Original strand, 7121040 - 7121068
Alignment:
Q  27 ccatacccgcacccattacccgcacttta 55  Q
    |||||||||||||||||||||||||||||    
T  7121040 ccatacccgcacccattacccgcacttta 7121068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 29426399 - 29426351
Alignment:
Q  10 tatgggtacttaagtgtccatacccgcacccattacccgcactttaact 58  Q
    |||||| || |||||| ||||||||||||||||||||| || |||||||    
T  29426399 tatgggcacctaagtgcccatacccgcacccattacccacagtttaact 29426351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 29512303 - 29512247
Alignment:
Q  5 tatcctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||| ||||||||| ||||||  |||| | ||| |||||||||||||||||||||||    
T  29512303 tatcatatgggtacctaagtgcacatatctgcatccattacccgcactttaactatg 29512247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 30489682 - 30489734
Alignment:
Q  4 atatcctatgggtacttaagtgtccatacccgcacccattacccgcactttaa 56  Q
    |||||||||||  || |||||| | ||||||| ||||||||||||||||||||    
T  30489682 atatcctatggacacctaagtgcctatacccgtacccattacccgcactttaa 30489734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 33794489 - 33794441
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaa 56  Q
    ||||||||||| ||||||  |||| ||||||||||||| ||||||||||    
T  33794489 cctatgggtacctaagtgctcatatccgcacccattactcgcactttaa 33794441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 14106349 - 14106384
Alignment:
Q  20 taagtgtccatacccgcacccattacccgcacttta 55  Q
    |||||| ||||||||||||||||| |||||||||||    
T  14106349 taagtgcccatacccgcacccattccccgcacttta 14106384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 61
Target Start/End: Complemental strand, 43634578 - 43634543
Alignment:
Q  26 tccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||||| |||||||| |||||||||||||    
T  43634578 tccatacccgcactcattacccccactttaactatg 43634543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 61
Target Start/End: Complemental strand, 43634645 - 43634610
Alignment:
Q  26 tccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||||| |||||||| |||||||||||||    
T  43634645 tccatacccgcactcattacccccactttaactatg 43634610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 48514452 - 48514499
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttta 55  Q
    |||||||| ||||||||| ||||| ||| |||||||||||||| ||||    
T  48514452 cctatgggcacttaagtgcccataaccgtacccattacccgcatttta 48514499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 2e-18; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 2e-18
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 31454928 - 31454978
Alignment:
Q  11 atgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  31454928 atgggtacttaagtgtccatacccacacccattacccgcactttaactatg 31454978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 8e-18
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 16567594 - 16567647
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  16567594 cctatgggtacttaagtacccatacccgcacccattacccgcactttaactatg 16567647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 8e-18
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 16598068 - 16598015
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  16598068 cctatgggtacttaagtacccatacccgcacccattacccgcactttaactatg 16598015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 8e-18
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 46181240 - 46181293
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  46181240 cctatgggtacttaagtacccatacccgcacccattacccgcactttaactatg 46181293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 10066346 - 10066293
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||| ||||| |||||| |||||||||||||||||||||||||||||||||||    
T  10066346 cctataggtacctaagtgcccatacccgcacccattacccgcactttaactatg 10066293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 19805065 - 19805118
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||    
T  19805065 cctatgggtacctaagtgctcatacccgcacccattacccgcactttaactatg 19805118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 27398607 - 27398660
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||| |||||||||| ||||||||||||||||||||| |||||||||||||    
T  27398607 cctatggatacttaagtgcccatacccgcacccattacccacactttaactatg 27398660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 43702501 - 43702448
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||| |||||| ||||||||||| |||||||||||||||||||||||    
T  43702501 cctatgggtacctaagtgcccatacccgcatccattacccgcactttaactatg 43702448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 38470003 - 38469956
Alignment:
Q  11 atgggtacttaagtgtccatacccgcacccattacccgcactttaact 58  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  38470003 atgggcacttaagtgcccatacccgcacccattacccgcactttaact 38469956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 1876130 - 1876077
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||| || |||||| |||||||||||||||||||||||| ||||||||||    
T  1876130 cctatgggcacctaagtgcccatacccgcacccattacccgcattttaactatg 1876077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 5023279 - 5023226
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||| |||||| ||||||||||||||||| |||| ||||||||||||    
T  5023279 cctatgggtacctaagtgcccatacccgcacccattgcccgtactttaactatg 5023226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 5924145 - 5924104
Alignment:
Q  20 taagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  5924145 taagtgtccatacctgcacccattacccgcactttaactatg 5924104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 28067358 - 28067309
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaac 57  Q
    |||||||||||||||||| ||||||| |||||||||||| ||||||||||    
T  28067358 cctatgggtacttaagtgcccatacctgcacccattacctgcactttaac 28067309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 43224345 - 43224398
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||  |||||| ||||||| |||||||||||||||||||||||||||    
T  43224345 cctatgggtatctaagtgcccatacctgcacccattacccgcactttaactatg 43224398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 30738720 - 30738668
Alignment:
Q  9 ctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||| |||||| |||||||| ||||||||||| ||||||||||||||    
T  30738720 ctatgggtacctaagtgcccatacccacacccattacctgcactttaactatg 30738668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 26299180 - 26299227
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttta 55  Q
    |||||||| ||||||||||||||||||||||| |||| ||||||||||    
T  26299180 cctatgggcacttaagtgtccatacccgcaccaattatccgcacttta 26299227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 40789618 - 40789572
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttt 54  Q
    |||||||| ||||||||| |||||||||||| |||||||||||||||    
T  40789618 cctatgggcacttaagtgcccatacccgcactcattacccgcacttt 40789572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 3362999 - 3363036
Alignment:
Q  24 tgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||||||| |||||||||||||||||||||||    
T  3362999 tgtccatacccgcatccattacccgcactttaactatg 3363036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 3551620 - 3551567
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||| |||| |||||||||||||||| | ||||||||| |||||||||||||    
T  3551620 cctatgagtacctaagtgtccatacccgtatccattacccacactttaactatg 3551567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 30391575 - 30391624
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaac 57  Q
    |||||||| ||||||||| ||||||||||| |||||| ||||||||||||    
T  30391575 cctatgggcacttaagtgcccatacccgcatccattatccgcactttaac 30391624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 48558771 - 48558722
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaac 57  Q
    |||||||  ||||||||||||||| ||||| |||||||||||||||||||    
T  48558771 cctatggccacttaagtgtccatatccgcatccattacccgcactttaac 48558722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 36074211 - 36074163
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaa 56  Q
    |||||||| || |||||| ||||||||| ||||||||||||||||||||    
T  36074211 cctatgggcacctaagtgcccatacccgtacccattacccgcactttaa 36074163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 2959964 - 2960015
Alignment:
Q  10 tatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||| || ||||||||||||||| || | |||||||||||||||||||||    
T  2959964 tatgggcacctaagtgtccatacccacatctattacccgcactttaactatg 2960015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 17172306 - 17172260
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttt 54  Q
    |||||||| |||||||||  ||||||| |||||||||||||||||||    
T  17172306 cctatgggcacttaagtgctcatacccccacccattacccgcacttt 17172260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 36072632 - 36072682
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaact 58  Q
    |||||||| || |||||| ||||||||||||| |||||||||| |||||||    
T  36072632 cctatgggcacctaagtgcccatacccgcaccaattacccgcaatttaact 36072682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 44300736 - 44300786
Alignment:
Q  4 atatcctatgggtacttaagtgtccatacccgcacccattacccgcacttt 54  Q
    ||||| |||||| ||||||||| ||||||| |||||| |||||||||||||    
T  44300736 atatcttatgggcacttaagtgcccatacctgcacccgttacccgcacttt 44300786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 11244047 - 11244104
Alignment:
Q  4 atatcctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||||||| |||||  |||||||||||||||||| |  || ||||||||||    
T  11244047 atatcctatgggtacctaagtacccatacccgcacccattatcaacattttaactatg 11244104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 33978854 - 33978899
Alignment:
Q  10 tatgggtacttaagtgtccatacccgcacccattacccgcacttta 55  Q
    |||||| || |||||| |||||||||||||||||| ||||||||||    
T  33978854 tatgggcacataagtgcccatacccgcacccattatccgcacttta 33978899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 34152444 - 34152399
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactt 53  Q
    |||||||  ||||||||| ||||||||||||||||||||| |||||    
T  34152444 cctatggacacttaagtgcccatacccgcacccattacccacactt 34152399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 34174680 - 34174725
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactt 53  Q
    |||||||  ||||||||| ||||||||||||||||||||| |||||    
T  34174680 cctatggacacttaagtgcccatacccgcacccattacccacactt 34174725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 3809458 - 3809415
Alignment:
Q  11 atgggtacttaagtgtccatacccgcacccattacccgcacttt 54  Q
    ||||||| ||||||| || |||||| ||||||||||||||||||    
T  3809458 atgggtatttaagtgcccgtacccgaacccattacccgcacttt 3809415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0938 (Bit Score: 46; Significance: 8e-18; HSPs: 1)
Name: scaffold0938
Description:

Target: scaffold0938; HSP #1
Raw Score: 46; E-Value: 8e-18
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 482 - 531
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaac 57  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  482 cctatgggtacttaagtgcccatacccgcacccattacccgcactttaac 531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 46; Significance: 8e-18; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 46; E-Value: 8e-18
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 23970 - 23921
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaac 57  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23970 cctatgggtacttaagtgcccatacccgcacccattacccgcactttaac 23921  T

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Target: scaffold0062; HSP #2
Raw Score: 46; E-Value: 8e-18
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 34138 - 34089
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcactttaac 57  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  34138 cctatgggtacttaagtgcccatacccgcacccattacccgcactttaac 34089  T

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Target: scaffold0249 (Bit Score: 42; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 20050 - 20103
Alignment:
Q  4 atatcctatgggtacttaagtgtccatacccgcacccattacccgcactttaac 57  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  20050 atatcttatggatacttaagtgtccatacccgcacccattacccgcattttaac 20103  T

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Target: scaffold0312 (Bit Score: 40; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 5964 - 5905
Alignment:
Q  2 caatatcctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    |||||||||  ||||||||||||| ||||||| ||||||||||||| |||||||||||||    
T  5964 caatatcctgcgggtacttaagtgcccatacctgcacccattacccacactttaactatg 5905  T

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Target: scaffold0005 (Bit Score: 38; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 240557 - 240500
Alignment:
Q  4 atatcctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatg 61  Q
    ||||||||||||||| | |||| ||||||||||| |||||| ||||||||||||||||    
T  240557 atatcctatgggtacctcagtgcccatacccgcatccattatccgcactttaactatg 240500  T

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Target: scaffold0024 (Bit Score: 36; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 110096 - 110045
Alignment:
Q  4 atatcctatgggtacttaagtgtccatacccgcacccattacccgcacttta 55  Q
    ||||||||||||||||||||||  ||||||| |||| |||||||||||||||    
T  110096 atatcctatgggtacttaagtgctcataccctcacctattacccgcacttta 110045  T

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Target: scaffold0230 (Bit Score: 31; Significance: 0.000000007; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 26656 - 26702
Alignment:
Q  8 cctatgggtacttaagtgtccatacccgcacccattacccgcacttt 54  Q
    |||||||| |||||||||  ||||||| |||||||||||||||||||    
T  26656 cctatgggcacttaagtgctcatacccccacccattacccgcacttt 26702  T

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