View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4328_low_7 (Length: 255)
Name: NF4328_low_7
Description: NF4328
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4328_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 181; Significance: 7e-98; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 9 - 236
Target Start/End: Complemental strand, 9797280 - 9797048
Alignment:
| Q |
9 |
ttatacttaaggggaaataaatatat----tttaagggcttatatagttaggggccgagggagtattaatagagaaatatttatgtagtgattggtattg |
104 |
Q |
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| T |
9797280 |
ttatacttaaggggaaataaatatatatattttaagggcttata--gttaggggccgagggagtattaatagagaaatatttatgtagtgattggtatta |
9797183 |
T |
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| Q |
105 |
atatatagaatctagatcatagattccaagaagatgatgatg---taggagtagcagcaccacaagggcaaatggtcaactagtagtaacaacagaaaca |
201 |
Q |
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| T |
9797182 |
atatatagaatatagatcatagattccaacaagatgatgatgatgtaggagtagcagcaccacaagggcaaatggtcaactagtagtaacaacagaaaca |
9797083 |
T |
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| Q |
202 |
aatggaagcacaagaagccacatgtctttccctta |
236 |
Q |
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| T |
9797082 |
aatggaagcacaagaagccacatgtctttccctta |
9797048 |
T |
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