View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4329-Insertion-20 (Length: 110)
Name: NF4329-Insertion-20
Description: NF4329
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4329-Insertion-20 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 94; Significance: 2e-46; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 94; E-Value: 2e-46
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 35952144 - 35952037
Alignment:
| Q |
1 |
agtacaggcataaaagacctgctaataatttgttaagcataacaattgacagcagaagaccttcggattttggtatattcataacatcaaaatagtcctg |
100 |
Q |
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| T |
35952144 |
agtacaggcataaaagacctgctaataatttgttaagcataacaattgacagcagaagaccttcggattttgg-atattcataacatcaaaat-gtcctg |
35952047 |
T |
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| Q |
101 |
tattattaac |
110 |
Q |
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|||||||||| |
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| T |
35952046 |
tattattaac |
35952037 |
T |
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