View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4329-Insertion-40 (Length: 151)
Name: NF4329-Insertion-40
Description: NF4329
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4329-Insertion-40 |
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| [»] chr7 (2 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 151; Significance: 3e-80; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 151; E-Value: 3e-80
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 43859847 - 43859997
Alignment:
| Q |
1 |
aaactcagtgaagaatttgttttgtgaaaccaattcattaacaatgtttctagactgcttggttgttagaagagcagcgtctgatgtgaagagacccttg |
100 |
Q |
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| T |
43859847 |
aaactcagtgaagaatttgttttgtgaaaccaattcattaacaatgtttctagactgcttggttgttagaagagcagcgtctgatgtgaagagacccttg |
43859946 |
T |
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| Q |
101 |
ttttgtagaaggacaggataatagtcattgtcaaatgttgttgagctatta |
151 |
Q |
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| T |
43859947 |
ttttgtagaaggacaggataatagtcattgtcaaatgttgttgagctatta |
43859997 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 147; E-Value: 7e-78
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 43858176 - 43858326
Alignment:
| Q |
1 |
aaactcagtgaagaatttgttttgtgaaaccaattcattaacaatgtttctagactgcttggttgttagaagagcagcgtctgatgtgaagagacccttg |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43858176 |
aaactcagtgaagaatttgttttgtgaaaccaattcattaacaatgtttttagactgcttggttgttagaagagcagcgtctgatgtgaagagacccttg |
43858275 |
T |
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| Q |
101 |
ttttgtagaaggacaggataatagtcattgtcaaatgttgttgagctatta |
151 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43858276 |
ttttgtagaaggacaggataatagtcattgtcaaatgttgttgagctatta |
43858326 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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