View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4329-Insertion-48 (Length: 233)
Name: NF4329-Insertion-48
Description: NF4329
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4329-Insertion-48 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 44870211 - 44869979
Alignment:
| Q |
1 |
aattgtaccatgacagtcataataatgttttttatggtatattcttttggatatgtttgtaacgagatactcttctttgagggatttttaatgatatact |
100 |
Q |
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| T |
44870211 |
aattgtaccatgacagtcataataatgttttttatggtatattcttttggatatgtttgtaacgagatactcttctttgagggatttttaatgatatact |
44870112 |
T |
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| Q |
101 |
tcgaaatacatttttatttgttgtcatttttcaaatagatatgcattgtgtattgaaatagataagcaatcatgtttttctgttatcacttattatcaat |
200 |
Q |
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| T |
44870111 |
tcgaaatacatttttatttgttgtcatttttcaaatagatatgcattgtgtattgaaatagataagcattcatgtttttctgttataacttattatcaat |
44870012 |
T |
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| Q |
201 |
cctttaaagtttgaattgtagtgttaaatacta |
233 |
Q |
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| T |
44870011 |
cctttaaagtttaaattgtagtgttaaatacta |
44869979 |
T |
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Target: chr3 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 47529665 - 47529731
Alignment:
| Q |
76 |
tttgagggatttttaatgatatacttcg-aaatacatttttatttgttgtcatttttcaaatagata |
141 |
Q |
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| T |
47529665 |
tttgagggatttttaatgatttactttgcaaatacattttggtttgttttcatttttcaaatagata |
47529731 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 9854687 - 9854753
Alignment:
| Q |
76 |
tttgagggatttttaatgatatacttcg-aaatacatttttatttgttgtcatttttcaaatagata |
141 |
Q |
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| T |
9854687 |
tttgaaggatttttaatgatatactttgcaagtacattttagtttgatttcatttttcaaatagata |
9854753 |
T |
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