View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4329_low_15 (Length: 251)
Name: NF4329_low_15
Description: NF4329
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4329_low_15 |
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Alignment Details
Target: chr1 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 41738649 - 41738424
Alignment:
| Q |
11 |
gatgaatccgttgcaaccatgttgtgtgggaggtatgttttgtggaagtgttgtatgtgataaaccagaactttcattcttttgggaaaatggttggttt |
110 |
Q |
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| T |
41738649 |
gatgaatccgttgcaaccatgttgtgtgggaggtatgttttgtggaagtgttgtatgtgataaaccagaactttcattcttttgggaaaatggttggttt |
41738550 |
T |
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| Q |
111 |
gctgtttaccaaatggtgcaatccaatttgaagagaaaattcgctgatccttaagaaaaattgtattattttatagtgttctcaactttgtaaaatcttc |
210 |
Q |
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| T |
41738549 |
gctgtttaccaaatggtgcaatccaatttgaagagaaaattcgttgatccttaagaaaaattgtattattttatagtgttctcaactttgtaaaatcttc |
41738450 |
T |
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| Q |
211 |
aattacgatccaatcattgaataatg |
236 |
Q |
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|||||||| ||||||||||||||||| |
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| T |
41738449 |
aattacgacccaatcattgaataatg |
41738424 |
T |
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