View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4329_low_20 (Length: 236)
Name: NF4329_low_20
Description: NF4329
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4329_low_20 |
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Alignment Details
Target: chr2 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 12130444 - 12130306
Alignment:
| Q |
1 |
acaacaatatatcattgtaacaacgatataataacatgaagatattcaatccattaagtataaaacaacaaagaaatagtaagatattttaaaataacat |
100 |
Q |
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| T |
12130444 |
acaacaatatatcattgtaacaacgatataataacatgaagatattcaatccattaagtataaaacaacgaa-aaatagtaagatattttgaaataacat |
12130346 |
T |
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| Q |
101 |
ccaacgaaaccctaaagaagaaagaaccttgtaggaagct |
140 |
Q |
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| T |
12130345 |
ccaacgaaaccctaaagaagaaagaacctcgaaggaagct |
12130306 |
T |
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