View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4330-Insertion-3 (Length: 259)

Name: NF4330-Insertion-3
Description: NF4330
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4330-Insertion-3
NF4330-Insertion-3
[»] chr3 (75 HSPs)
chr3 (1-190)||(475912-476101)
chr3 (1-116)||(480898-481013)
chr3 (187-259)||(40478096-40478168)
chr3 (190-259)||(1129128-1129197)
chr3 (191-259)||(44379414-44379482)
chr3 (194-259)||(23456796-23456861)
chr3 (188-259)||(7862783-7862854)
chr3 (191-253)||(51344716-51344778)
chr3 (191-253)||(53289230-53289292)
chr3 (190-259)||(36220744-36220813)
chr3 (190-259)||(37520701-37520770)
chr3 (192-253)||(40474179-40474240)
chr3 (191-259)||(42621848-42621916)
chr3 (189-248)||(25834579-25834638)
chr3 (188-259)||(26456951-26457021)
chr3 (188-259)||(50412068-50412139)
chr3 (193-259)||(43745348-43745414)
chr3 (193-259)||(47746167-47746233)
chr3 (189-253)||(1021318-1021382)
chr3 (191-259)||(44653509-44653577)
chr3 (200-259)||(54788653-54788712)
chr3 (191-253)||(35501134-35501196)
chr3 (187-252)||(8966276-8966341)
chr3 (194-259)||(27045032-27045097)
chr3 (191-243)||(32121899-32121952)
chr3 (190-259)||(42479023-42479092)
chr3 (191-259)||(4817076-4817144)
chr3 (193-253)||(41982329-41982389)
chr3 (1-68)||(1186226-1186293)
chr3 (1-68)||(1204290-1204357)
chr3 (200-259)||(24170269-24170328)
chr3 (190-253)||(30349348-30349411)
chr3 (191-253)||(29388695-29388757)
chr3 (189-259)||(29806347-29806417)
chr3 (191-253)||(39987351-39987413)
chr3 (191-259)||(29815466-29815535)
chr3 (188-253)||(35137784-35137849)
chr3 (194-259)||(37127807-37127871)
chr3 (1-61)||(1304733-1304793)
chr3 (189-245)||(9252205-9252261)
chr3 (191-259)||(26884973-26885041)
chr3 (189-249)||(32636975-32637035)
chr3 (205-253)||(34825612-34825660)
chr3 (202-253)||(7352177-7352228)
chr3 (200-259)||(9507241-9507300)
chr3 (200-259)||(9515216-9515275)
chr3 (191-241)||(29698322-29698373)
chr3 (189-259)||(48795437-48795508)
chr3 (187-251)||(5335359-5335424)
chr3 (1-54)||(20948691-20948744)
chr3 (200-253)||(26012206-26012259)
chr3 (186-251)||(40021426-40021491)
chr3 (204-253)||(44522335-44522384)
chr3 (188-252)||(50258146-50258211)
chr3 (192-253)||(54428839-54428900)
chr3 (188-259)||(29385020-29385092)
chr3 (193-253)||(41217399-41217459)
chr3 (187-259)||(45602020-45602092)
chr3 (1-68)||(778223-778290)
chr3 (192-259)||(15997159-15997226)
chr3 (189-259)||(20199686-20199756)
chr3 (200-259)||(35389300-35389359)
chr3 (191-237)||(19547849-19547895)
chr3 (193-235)||(46507363-46507405)
chr3 (194-259)||(51996422-51996488)
chr3 (1-54)||(5361054-5361107)
chr3 (186-235)||(5529056-5529105)
chr3 (191-259)||(42622947-42623016)
chr3 (222-259)||(45538676-45538713)
chr3 (194-259)||(50029754-50029819)
chr3 (194-259)||(51756096-51756161)
chr3 (191-246)||(52058514-52058571)
chr3 (6-54)||(20977366-20977414)
chr3 (191-259)||(25482251-25482319)
chr3 (215-259)||(39678445-39678489)
[»] chr7 (46 HSPs)
chr7 (192-259)||(23406653-23406720)
chr7 (190-259)||(26605055-26605124)
chr7 (189-259)||(15954599-15954669)
chr7 (192-259)||(35291327-35291394)
chr7 (190-253)||(46575100-46575163)
chr7 (191-259)||(3214859-3214932)
chr7 (193-253)||(15716250-15716310)
chr7 (194-253)||(30076985-30077044)
chr7 (188-259)||(35358041-35358112)
chr7 (189-259)||(42584099-42584170)
chr7 (191-253)||(6791444-6791506)
chr7 (190-243)||(21919687-21919741)
chr7 (191-253)||(29606268-29606330)
chr7 (189-259)||(41046836-41046906)
chr7 (190-259)||(32529179-32529248)
chr7 (194-259)||(41968435-41968500)
chr7 (191-259)||(22967409-22967477)
chr7 (193-253)||(24952928-24952988)
chr7 (190-253)||(31743645-31743709)
chr7 (191-241)||(5215380-5215431)
chr7 (189-243)||(29688922-29688977)
chr7 (190-253)||(38665456-38665519)
chr7 (190-253)||(47642843-47642906)
chr7 (191-253)||(7574551-7574613)
chr7 (191-253)||(11750419-11750481)
chr7 (193-251)||(17306603-17306661)
chr7 (191-253)||(23110430-23110492)
chr7 (191-253)||(28264750-28264812)
chr7 (191-235)||(5582861-5582905)
chr7 (189-237)||(18520275-18520323)
chr7 (1-89)||(32413598-32413686)
chr7 (191-259)||(37504559-37504627)
chr7 (186-237)||(18990448-18990499)
chr7 (189-259)||(38882816-38882887)
chr7 (189-259)||(30936092-30936162)
chr7 (191-252)||(15591730-15591791)
chr7 (191-243)||(23182390-23182443)
chr7 (203-251)||(26413640-26413686)
chr7 (190-259)||(30891595-30891664)
chr7 (191-243)||(48460251-48460304)
chr7 (190-234)||(23585623-23585667)
chr7 (189-253)||(24812422-24812486)
chr7 (205-253)||(38666214-38666262)
chr7 (209-253)||(41769305-41769349)
chr7 (190-246)||(43631054-43631110)
chr7 (191-259)||(45857475-45857543)
[»] chr6 (32 HSPs)
chr6 (189-259)||(4509767-4509837)
chr6 (189-253)||(23069044-23069108)
chr6 (190-259)||(33574691-33574760)
chr6 (190-259)||(33574869-33574938)
chr6 (192-259)||(11763174-11763241)
chr6 (190-253)||(23416841-23416904)
chr6 (189-259)||(18772198-18772268)
chr6 (191-253)||(33574233-33574295)
chr6 (189-259)||(8549561-8549631)
chr6 (214-253)||(2565395-2565434)
chr6 (189-243)||(10965977-10966032)
chr6 (190-259)||(14779241-14779310)
chr6 (190-246)||(29023618-29023674)
chr6 (193-259)||(9687114-9687180)
chr6 (185-249)||(1339720-1339785)
chr6 (191-243)||(1705959-1706012)
chr6 (190-259)||(9662096-9662165)
chr6 (185-253)||(10887803-10887872)
chr6 (191-243)||(14507974-14508027)
chr6 (191-243)||(19474025-19474078)
chr6 (187-243)||(24249159-24249216)
chr6 (191-259)||(242885-242953)
chr6 (191-255)||(3141040-3141104)
chr6 (191-259)||(4576723-4576791)
chr6 (188-259)||(6295716-6295787)
chr6 (188-259)||(6302526-6302597)
chr6 (209-253)||(22755586-22755630)
chr6 (191-246)||(31644410-31644465)
chr6 (190-243)||(21294143-21294197)
chr6 (191-243)||(2994322-2994375)
chr6 (200-259)||(229820-229879)
chr6 (187-235)||(21970669-21970717)
[»] scaffold0923 (1 HSPs)
scaffold0923 (191-259)||(23-91)
[»] chr1 (61 HSPs)
chr1 (185-253)||(38261147-38261215)
chr1 (193-259)||(34038163-34038229)
chr1 (187-259)||(44263995-44264067)
chr1 (187-259)||(48976871-48976943)
chr1 (188-259)||(35873933-35874004)
chr1 (189-259)||(9587982-9588052)
chr1 (185-259)||(12105154-12105228)
chr1 (189-259)||(52345597-52345667)
chr1 (190-259)||(24230568-24230637)
chr1 (191-249)||(10408643-10408701)
chr1 (193-259)||(52180571-52180637)
chr1 (190-253)||(45622479-45622542)
chr1 (191-253)||(25702435-25702497)
chr1 (191-253)||(31821571-31821633)
chr1 (191-253)||(46641861-46641923)
chr1 (194-259)||(42275338-42275403)
chr1 (192-253)||(47544641-47544702)
chr1 (187-248)||(51056545-51056606)
chr1 (191-259)||(31530307-31530375)
chr1 (203-259)||(47693537-47693593)
chr1 (194-253)||(52861300-52861359)
chr1 (191-253)||(24003419-24003481)
chr1 (187-253)||(28624822-28624888)
chr1 (189-253)||(10348025-10348089)
chr1 (187-259)||(46235170-46235242)
chr1 (192-259)||(7227571-7227638)
chr1 (190-253)||(8396693-8396756)
chr1 (191-253)||(2249587-2249649)
chr1 (191-253)||(13202936-13202998)
chr1 (193-259)||(24381658-24381724)
chr1 (190-243)||(40054941-40054995)
chr1 (200-253)||(6966253-6966306)
chr1 (191-243)||(43916346-43916399)
chr1 (191-259)||(12178937-12179005)
chr1 (191-259)||(14152687-14152755)
chr1 (191-259)||(21883150-21883218)
chr1 (190-253)||(24511923-24511986)
chr1 (194-253)||(38718076-38718135)
chr1 (191-249)||(6526428-6526486)
chr1 (186-243)||(7435867-7435925)
chr1 (191-253)||(30320890-30320952)
chr1 (191-243)||(1845073-1845126)
chr1 (191-243)||(44808758-44808811)
chr1 (191-259)||(46362023-46362091)
chr1 (190-253)||(51004789-51004853)
chr1 (191-259)||(51787464-51787532)
chr1 (200-259)||(477451-477510)
chr1 (194-237)||(48760424-48760467)
chr1 (189-259)||(49982454-49982525)
chr1 (193-259)||(17553818-17553884)
chr1 (194-253)||(21073147-21073207)
chr1 (185-235)||(23061364-23061414)
chr1 (193-242)||(6468793-6468842)
chr1 (193-246)||(30547961-30548014)
chr1 (220-253)||(30571353-30571386)
chr1 (191-259)||(47458866-47458934)
chr1 (190-259)||(50239276-50239345)
chr1 (189-240)||(23539940-23539992)
chr1 (191-259)||(32144669-32144737)
chr1 (191-243)||(33910044-33910096)
chr1 (188-259)||(50533901-50533972)
[»] chr2 (36 HSPs)
chr2 (188-259)||(35895308-35895379)
chr2 (187-253)||(7673291-7673357)
chr2 (188-252)||(1580244-1580308)
chr2 (189-253)||(32602301-32602365)
chr2 (190-253)||(25331454-25331517)
chr2 (191-259)||(30981224-30981292)
chr2 (190-253)||(9589458-9589521)
chr2 (194-253)||(17451285-17451344)
chr2 (191-253)||(9122156-9122218)
chr2 (187-253)||(32401075-32401141)
chr2 (185-259)||(38073100-38073175)
chr2 (189-243)||(41555429-41555484)
chr2 (191-253)||(21404198-21404260)
chr2 (191-253)||(39620864-39620926)
chr2 (191-253)||(43439995-43440057)
chr2 (193-259)||(45157852-45157918)
chr2 (1-74)||(43864075-43864148)
chr2 (1-74)||(43867566-43867639)
chr2 (1-74)||(43875242-43875315)
chr2 (192-259)||(33493810-33493877)
chr2 (189-251)||(3261252-3261314)
chr2 (193-259)||(6945680-6945746)
chr2 (190-246)||(8333890-8333948)
chr2 (189-259)||(40495785-40495855)
chr2 (193-259)||(40946764-40946830)
chr2 (186-259)||(4297892-4297965)
chr2 (191-243)||(34188888-34188941)
chr2 (189-253)||(4740569-4740633)
chr2 (189-259)||(11088563-11088634)
chr2 (189-243)||(40810772-40810827)
chr2 (189-259)||(38617726-38617796)
chr2 (191-243)||(15362469-15362522)
chr2 (190-259)||(27401068-27401137)
chr2 (191-259)||(42640850-42640919)
chr2 (191-235)||(45690499-45690544)
chr2 (188-235)||(12182920-12182968)
[»] scaffold0667 (1 HSPs)
scaffold0667 (191-259)||(171-239)
[»] chr8 (39 HSPs)
chr8 (191-259)||(29454143-29454211)
chr8 (189-259)||(10706553-10706623)
chr8 (190-259)||(1043398-1043467)
chr8 (191-259)||(2261352-2261420)
chr8 (194-259)||(39300086-39300151)
chr8 (191-259)||(29265589-29265657)
chr8 (203-259)||(40776649-40776705)
chr8 (187-259)||(44000557-44000629)
chr8 (192-253)||(34165910-34165971)
chr8 (193-253)||(118154-118214)
chr8 (189-253)||(7128088-7128152)
chr8 (192-259)||(38329452-38329519)
chr8 (200-253)||(37675946-37675999)
chr8 (191-259)||(2749315-2749383)
chr8 (205-253)||(26521980-26522028)
chr8 (189-253)||(41720593-41720657)
chr8 (192-259)||(26988388-26988455)
chr8 (188-259)||(34634192-34634262)
chr8 (190-253)||(38210664-38210727)
chr8 (190-253)||(40579040-40579103)
chr8 (193-259)||(9497877-9497943)
chr8 (189-259)||(17792542-17792612)
chr8 (189-234)||(15231350-15231395)
chr8 (194-246)||(6631464-6631516)
chr8 (191-259)||(15451421-15451489)
chr8 (186-246)||(36672005-36672065)
chr8 (188-243)||(38764735-38764791)
chr8 (193-253)||(39646639-39646699)
chr8 (194-253)||(5328945-5329004)
chr8 (189-238)||(12632902-12632952)
chr8 (187-253)||(27847813-27847879)
chr8 (190-246)||(32887665-32887723)
chr8 (189-237)||(23870266-23870315)
chr8 (190-259)||(31158892-31158961)
chr8 (194-259)||(43841846-43841911)
chr8 (194-259)||(45210569-45210634)
chr8 (191-259)||(17642411-17642479)
chr8 (205-253)||(24377646-24377694)
chr8 (193-252)||(30777274-30777334)
[»] chr5 (47 HSPs)
chr5 (192-259)||(39816506-39816573)
chr5 (194-259)||(13119137-13119202)
chr5 (188-259)||(36427902-36427973)
chr5 (188-259)||(42486602-42486673)
chr5 (192-253)||(702294-702355)
chr5 (188-259)||(29960205-29960276)
chr5 (187-253)||(2852042-2852108)
chr5 (194-259)||(34259878-34259943)
chr5 (191-259)||(13127319-13127387)
chr5 (204-259)||(5360064-5360119)
chr5 (190-253)||(6260362-6260425)
chr5 (192-259)||(40563116-40563183)
chr5 (194-253)||(40803665-40803724)
chr5 (193-251)||(479676-479734)
chr5 (191-253)||(33678502-33678564)
chr5 (194-259)||(33210708-33210773)
chr5 (193-253)||(9604433-9604493)
chr5 (188-243)||(39939030-39939086)
chr5 (204-259)||(3426128-3426183)
chr5 (189-259)||(39979681-39979752)
chr5 (191-253)||(14434818-14434880)
chr5 (200-253)||(9913198-9913251)
chr5 (192-253)||(28318348-28318409)
chr5 (202-259)||(30753458-30753515)
chr5 (191-251)||(4617045-4617105)
chr5 (191-246)||(17069336-17069391)
chr5 (192-259)||(29744240-29744307)
chr5 (203-253)||(35370410-35370460)
chr5 (190-243)||(40756540-40756594)
chr5 (191-253)||(42597474-42597535)
chr5 (191-259)||(4039469-4039538)
chr5 (191-246)||(5512682-5512739)
chr5 (191-259)||(31588572-31588641)
chr5 (188-259)||(2011052-2011123)
chr5 (190-241)||(5204616-5204668)
chr5 (187-246)||(16432654-16432714)
chr5 (191-259)||(27980112-27980180)
chr5 (212-251)||(38293966-38294005)
chr5 (1-47)||(33958100-33958146)
chr5 (190-253)||(4367131-4367196)
chr5 (194-238)||(5140672-5140717)
chr5 (189-237)||(7080470-7080519)
chr5 (188-259)||(9499740-9499811)
chr5 (189-237)||(9910037-9910085)
chr5 (200-259)||(12336553-12336612)
chr5 (189-237)||(28332482-28332530)
chr5 (188-259)||(29996833-29996905)
[»] chr4 (63 HSPs)
chr4 (191-253)||(1857148-1857210)
chr4 (203-259)||(5340307-5340363)
chr4 (192-259)||(5970700-5970767)
chr4 (191-253)||(4720815-4720877)
chr4 (190-252)||(27761399-27761461)
chr4 (191-253)||(27990536-27990598)
chr4 (193-259)||(56303176-56303242)
chr4 (202-259)||(352485-352542)
chr4 (200-253)||(24535491-24535544)
chr4 (191-248)||(33491162-33491219)
chr4 (191-259)||(42177342-42177410)
chr4 (190-253)||(28835787-28835850)
chr4 (194-253)||(31999069-31999128)
chr4 (191-253)||(126922-126984)
chr4 (191-253)||(29582310-29582372)
chr4 (190-259)||(30348162-30348231)
chr4 (191-251)||(23058765-23058825)
chr4 (189-253)||(26118097-26118161)
chr4 (192-252)||(29364527-29364587)
chr4 (194-253)||(8256786-8256845)
chr4 (194-253)||(8270204-8270263)
chr4 (193-259)||(50608023-50608089)
chr4 (191-243)||(19527077-19527130)
chr4 (186-259)||(32288898-32288971)
chr4 (191-259)||(32570705-32570774)
chr4 (191-259)||(34829061-34829129)
chr4 (191-259)||(38008492-38008560)
chr4 (191-259)||(46663664-46663732)
chr4 (193-243)||(39103539-39103590)
chr4 (204-259)||(54996441-54996496)
chr4 (193-259)||(24979944-24980009)
chr4 (188-253)||(34584179-34584245)
chr4 (205-259)||(56104416-56104470)
chr4 (183-243)||(49286680-49286741)
chr4 (194-259)||(52607571-52607636)
chr4 (194-246)||(408414-408466)
chr4 (191-259)||(3763451-3763519)
chr4 (191-259)||(9356381-9356449)
chr4 (192-243)||(12756356-12756408)
chr4 (188-246)||(22789579-22789639)
chr4 (190-246)||(30060529-30060585)
chr4 (191-259)||(36631036-36631103)
chr4 (200-243)||(53973465-53973509)
chr4 (191-253)||(595296-595359)
chr4 (187-253)||(22077709-22077776)
chr4 (189-235)||(27950256-27950303)
chr4 (189-259)||(48207416-48207486)
chr4 (190-253)||(50498143-50498206)
chr4 (191-253)||(52323966-52324029)
chr4 (192-259)||(53936508-53936575)
chr4 (190-243)||(4491209-4491263)
chr4 (191-253)||(45692622-45692684)
chr4 (190-259)||(54178758-54178827)
chr4 (195-259)||(25607694-25607759)
chr4 (191-243)||(31296530-31296583)
chr4 (188-252)||(1433804-1433868)
chr4 (188-259)||(21424479-21424551)
chr4 (188-246)||(21722542-21722602)
chr4 (191-235)||(28038047-28038091)
chr4 (211-243)||(43349087-43349119)
chr4 (191-243)||(46215772-46215824)
chr4 (190-246)||(50189364-50189420)
chr4 (191-259)||(50776110-50776178)
[»] scaffold1319 (1 HSPs)
scaffold1319 (185-253)||(37-105)
[»] scaffold0432 (1 HSPs)
scaffold0432 (186-253)||(3027-3091)
[»] scaffold0271 (1 HSPs)
scaffold0271 (191-252)||(17005-17067)
[»] scaffold0625 (1 HSPs)
scaffold0625 (186-237)||(6261-6312)
[»] scaffold0438 (1 HSPs)
scaffold0438 (1-68)||(5312-5379)
[»] scaffold0446 (1 HSPs)
scaffold0446 (205-253)||(3884-3932)


Alignment Details
Target: chr3 (Bit Score: 166; Significance: 6e-89; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 476101 - 475912
Alignment:
Q  1 tcttttggataaaatacaagtttgaacggcctctttggcgtttaaaaaggagagtgtgtgaaggagaatacaatgggataaatcactgataaagtcctct 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  476101 tcttttggataaaatacaagtttgaacggcttctttggcgtttaaaaaggagagtgtgtgaaggagaatacaatctgataaatcactgataaagtcctct 476002  T
Q  101 tcatgtttgttgtcgtttttaagtttcgtcttgcgtctctccattgttgtctgagaaattaaattgattagagaaaagactaactattaa 190  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  476001 tcatgtttgttgtcgttcttatgtttcgtcttgcgtctctccattgttgtctgagaaattaaattgattagagaaaaaactaactattaa 475912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 481013 - 480898
Alignment:
Q  1 tcttttggataaaatacaagtttgaacggcctctttggcgtttaaaaaggagagtgtgtgaaggagaatacaatgggataaatcactgataaagtcctct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||  |||  ||||||||||||||||| ||| |||    
T  481013 tcttttggataaaatacaagtttgaacggcctctttggcgtttaaaaaggagagtatgagatggagaacgcaaccggataaatcactgataaggtcgtct 480914  T
Q  101 tcatgtttgttgtcgt 116  Q
    |||| |||| ||||||    
T  480913 tcatttttgctgtcgt 480898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 40478168 - 40478096
Alignment:
Q  187 ttaagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  40478168 ttaagggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaa 40478096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 190 - 259
Target Start/End: Original strand, 1129128 - 1129197
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1129128 agggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaa 1129197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 44379414 - 44379482
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44379414 gggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaa 44379482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 23456861 - 23456796
Alignment:
Q  194 aacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  23456861 aacttctacggtacactcacaaagtgaggtgtaccggtactccttcttcataattttataaattaa 23456796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 7862854 - 7862783
Alignment:
Q  188 taagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||| ||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7862854 taaggaaacttctatggtacattcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaa 7862783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 191 - 253
Target Start/End: Complemental strand, 51344778 - 51344716
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  51344778 gggaacttctacggtacacttacaaagtaaggtgtaccggtactcctgcttcataattttata 51344716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 53289230 - 53289292
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  53289230 gggaacttctacggtacactcacaaaatgaggtgtaccggtactcctgcttcttaattttata 53289292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 259
Target Start/End: Complemental strand, 36220813 - 36220744
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||  ||||||||||||||||| |||||    
T  36220813 agggaacttctacggtacactcacaaagtgaggtgtaccgatacttttgcttcataattttataaattaa 36220744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 259
Target Start/End: Original strand, 37520701 - 37520770
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||| | ||||||||||||||| |||||    
T  37520701 agggaacttctacggtacactcacaaaatgaggtgtaccggtactctttcttcataattttataaattaa 37520770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 40474240 - 40474179
Alignment:
Q  192 ggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  40474240 ggaacttctatggtacactcataaagtgaggtgtaccggtactcctgcttcataattttata 40474179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 42621848 - 42621916
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| ||||||||||||||||| ||||||||||| |||||| ||||||||||||||||| |||||    
T  42621848 gggaacttctacggtacactcacaaaatgaggtgtaccagtactcttgcttcataattttataaattaa 42621916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 25834638 - 25834579
Alignment:
Q  189 aagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataatt 248  Q
    |||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  25834638 aagggaacttctacggtacactcataaagtgagatgtaccggtactcctgcttcataatt 25834579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 26456951 - 26457021
Alignment:
Q  188 taagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||||| |||| |||||||| ||||||||||| |||||||||||||||||||||||||||| |||||    
T  26456951 taagggaacttctacg-tacactcataaagtgaggtgaaccggtactcctgcttcataattttataaattaa 26457021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 50412068 - 50412139
Alignment:
Q  188 taagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| |||||||||||||||||||| ||||||||| |||||||| | ||||||||||||||| |||||    
T  50412068 taagggaatttatacggtacactcacaaaatgaggtgtatcggtactctttcttcataattttataaattaa 50412139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 193 - 259
Target Start/End: Original strand, 43745348 - 43745414
Alignment:
Q  193 gaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||| ||||||||| | ||||||||||||||||||||||| |||||||||||||||||| |||||    
T  43745348 gaacttctacggtacatttacaaagtgaggtgtaccggtacttctgcttcataattttataaattaa 43745414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 193 - 259
Target Start/End: Complemental strand, 47746233 - 47746167
Alignment:
Q  193 gaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||| ||||||||||||||||| |||||||||||| ||||| ||||||||||||||||| |||||    
T  47746233 gaacttctacggtacactcacaaaatgaggtgtaccgatactcttgcttcataattttataaattaa 47746167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 1021382 - 1021318
Alignment:
Q  189 aagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||||| |||| |||||||||||| ||||||||| ||||||||||||||| ||||||||||    
T  1021382 aagggaacttctacgatacactcacaaaatgaggtgtatcggtactcctgcttcctaattttata 1021318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 44653577 - 44653509
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| ||||||||||||||||| |||||||||||||||||| |  |||||||||||||| |||||    
T  44653577 gggaacttctacggtacactcacaaaatgaggtgtaccggtactcttttttcataattttataaattaa 44653509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 200 - 259
Target Start/End: Complemental strand, 54788712 - 54788653
Alignment:
Q  200 tacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||| ||| |||||    
T  54788712 tacggtacactcacaaagtgaggtgtaccagtactcctgctttataatttaataaattaa 54788653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 253
Target Start/End: Complemental strand, 35501196 - 35501134
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||| || |||||||||||||| ||||||||||||||||||||||||| ||||| ||||    
T  35501196 gggaacttctatggtacactcacaaaatgaggtgtaccggtactcctgcttcttaattctata 35501134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 8966341 - 8966276
Alignment:
Q  187 ttaagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttat 252  Q
    |||||||||||| ||||||||||||| ||| | ||||||||||||||||||||||| ||| |||||    
T  8966341 ttaagggaacttctacggtacactcataaattaaggtgtaccggtactcctgcttcctaaatttat 8966276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 27045097 - 27045032
Alignment:
Q  194 aacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||| ||||||||||||||||| ||||||| |||||||||||| || |||||||||||| |||||    
T  27045097 aacttctacggtacactcacaaaatgaggtgcaccggtactccttctacataattttataaattaa 27045032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 32121899 - 32121952
Alignment:
Q  191 gggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttca 243  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  32121899 gggaacttctacggtacacctcacaaagtgaggtgtaccggtactcctgcttca 32121952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 259
Target Start/End: Complemental strand, 42479092 - 42479023
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||| ||||||||| ||||||| | |||||||||||||||| || |||||||||||||| |||||    
T  42479092 agggaacttctacggtacattcacaaaataaggtgtaccggtactcttgtttcataattttataaattaa 42479023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 4817076 - 4817144
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||| || ||||||||||||||||| |||||||||||||||||| | ||| ||||||||||| |||||    
T  4817076 gggaatttctacggtacactcacaaaatgaggtgtaccggtactcttactttataattttataaattaa 4817144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 41982389 - 41982329
Alignment:
Q  193 gaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||| ||||||||||||||||||||||||||| |||||||| | ||| |||||||||||    
T  41982389 gaacttctacggtacactcacaaagtgaggtgtatcggtactcttactttataattttata 41982329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 1186293 - 1186226
Alignment:
Q  1 tcttttggataaaatacaagtttgaacggcctctttggcgtttaaaaaggagagtgtgtgaaggagaa 68  Q
    |||||| |||||||| ||||||||||| ||||||||||| || |||||||||||| ||||| ||||||    
T  1186293 tcttttcgataaaatgcaagtttgaactgcctctttggcattcaaaaaggagagtatgtgatggagaa 1186226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 1204357 - 1204290
Alignment:
Q  1 tcttttggataaaatacaagtttgaacggcctctttggcgtttaaaaaggagagtgtgtgaaggagaa 68  Q
    |||||| |||||||| ||||||||||| ||||||||||| || |||||||||||| ||||| ||||||    
T  1204357 tcttttcgataaaatgcaagtttgaactgcctctttggcattcaaaaaggagagtatgtgatggagaa 1204290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 200 - 259
Target Start/End: Complemental strand, 24170328 - 24170269
Alignment:
Q  200 tacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||| |||||||||||||| || || ||||||||||||||||||||||| |||||    
T  24170328 tacggtacattcacaaagtgaggtatatcgatactcctgcttcataattttataaattaa 24170269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 30349411 - 30349348
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||||||| ||||||||||||||||| ||| ||||| ||||||| ||||||| ||||||||||    
T  30349411 agggaacttctacggtacactcacaaaatgaagtgtatcggtacttctgcttcttaattttata 30349348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 29388695 - 29388757
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||| ||||||| ||||||||| ||||||||||| |||||||| |||| ||||||||||    
T  29388695 gggaacttctacggtatactcacaaaatgaggtgtaccagtactcctacttcttaattttata 29388757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 259
Target Start/End: Complemental strand, 29806417 - 29806347
Alignment:
Q  189 aagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||||| |||||||||||| |||| |||||||||||||||||| |||||| ||| | |||| |||||    
T  29806417 aagggaacttctacggtacactcgcaaattgaggtgtaccggtactcttgcttcctaaatctataaattaa 29806347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 39987351 - 39987413
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||| ||||| ||||||| ||| ||||||||||||||||||||| ||| ||||||||||    
T  39987351 gggaacttctacgggacactcataaaatgaggtgtaccggtactcctgtttcttaattttata 39987413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 29815535 - 29815466
Alignment:
Q  191 gggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| |||||||||| ||||||| |||||||||||| | |||||||||||||| |||||| |||||    
T  29815535 gggaacttctacggtacacctcacaaattgaggtgtaccgatgctcctgcttcataaatttataaattaa 29815466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 35137849 - 35137784
Alignment:
Q  188 taagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||||||||| ||||||||||||  ||| | |||||||||| |||||||||||| ||||||||||    
T  35137849 taagggaacttctacggtacactcgtaaaataaggtgtaccgatactcctgcttcttaattttata 35137784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 37127807 - 37127871
Alignment:
Q  194 aacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||| ||||||||||||| ||| ||||||||||| ||||| |||||||||||||||||| |||||    
T  37127807 aacttctacggtacactcataaaatgaggtgtaccagtact-ctgcttcataattttataaattaa 37127871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1304733 - 1304793
Alignment:
Q  1 tcttttggataaaatacaagtttgaacggcctctttggcgtttaaaaaggagagtgtgtga 61  Q
    |||||| |||||||| ||||||||||| ||||||||||| || |||||||||||| |||||    
T  1304733 tcttttcgataaaatgcaagtttgaactgcctctttggcattcaaaaaggagagtatgtga 1304793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 9252261 - 9252205
Alignment:
Q  189 aagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcata 245  Q
    |||||||||| ||||||||||||  ||| |||||||||||||||||| |||||||||    
T  9252261 aagggaacttctacggtacactcgtaaattgaggtgtaccggtactcttgcttcata 9252205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 26884973 - 26885041
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| ||||||||||||||||  |||||||||||||||||| | | || |||||||||| |||||    
T  26884973 gggaacttctacggtacactcacaagatgaggtgtaccggtactcttacatcttaattttataaattaa 26885041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 249
Target Start/End: Complemental strand, 32637035 - 32636975
Alignment:
Q  189 aagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattt 249  Q
    ||||||| || |||||||||||||||||||||||||||||| |||||  | ||||||||||    
T  32637035 aagggaatttctacggtacactcacaaagtgaggtgtaccgatactctcgtttcataattt 32636975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 205 - 253
Target Start/End: Complemental strand, 34825660 - 34825612
Alignment:
Q  205 tacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||||||| ||||||||||||||||| ||||||| ||||||||||    
T  34825660 tacactcacaaaatgaggtgtaccggtacttctgcttcttaattttata 34825612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 202 - 253
Target Start/End: Original strand, 7352177 - 7352228
Alignment:
Q  202 cggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||||||||||||| |||| |||| ||||||||||||||| ||||||||||    
T  7352177 cggtacactcacaaaatgagatgtatcggtactcctgcttcttaattttata 7352228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 259
Target Start/End: Complemental strand, 9507300 - 9507241
Alignment:
Q  200 tacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||||||||||  |||||||||||||||||| ||| || |||||||||| |||||    
T  9507300 tacggtacactcacaagatgaggtgtaccggtactcttgcatcttaattttataaattaa 9507241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 259
Target Start/End: Complemental strand, 9515275 - 9515216
Alignment:
Q  200 tacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||||||||||  |||||||||||||||||| ||| || |||||||||| |||||    
T  9515275 tacggtacactcacaagatgaggtgtaccggtactcttgcatcttaattttataaattaa 9515216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 29698322 - 29698373
Alignment:
Q  191 gggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgctt 241  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||||||||||    
T  29698322 gggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgctt 29698373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 259
Target Start/End: Original strand, 48795437 - 48795508
Alignment:
Q  189 aagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||||| |||||||||| ||||||| |||||||||||||||||| | || ||||| |||||| |||||    
T  48795437 aagggaacttctacggtacacctcacaaattgaggtgtaccggtactcttactccataaatttataaattaa 48795508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 251
Target Start/End: Original strand, 5335359 - 5335424
Alignment:
Q  187 ttaagggaacttatacggtaca-ctcacaaagtgaggtgtaccggtactcctgcttcataatttta 251  Q
    |||||| ||||| ||||||||| |||||||| |||||||||||| ||||| |||||||||| ||||    
T  5335359 ttaaggaaacttctacggtacatctcacaaattgaggtgtaccgatactcttgcttcataaattta 5335424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 20948744 - 20948691
Alignment:
Q  1 tcttttggataaaatacaagtttgaacggcctctttggcgtttaaaaaggagag 54  Q
    |||| ||||||||| ||||||||||||||| | || ||||||||||||||||||    
T  20948744 tcttgtggataaaacacaagtttgaacggcgtgttgggcgtttaaaaaggagag 20948691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 26012206 - 26012259
Alignment:
Q  200 tacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||||||||||||||| ||||||||| |  |||||||||||| ||||||||||    
T  26012206 tacggtacactcacaaaatgaggtgtatcaatactcctgcttcttaattttata 26012259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 251
Target Start/End: Complemental strand, 40021491 - 40021426
Alignment:
Q  186 attaagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataatttta 251  Q
    ||||||||||||| || ||||| ||||||||||||| |||| ||||||||  ||||||| ||||||    
T  40021491 attaagggaacttctatggtacgctcacaaagtgagatgtatcggtactctcgcttcatgatttta 40021426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 44522384 - 44522335
Alignment:
Q  204 gtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||||||||||| |||||||||||| ||||| | |||||||||||||||    
T  44522384 gtacactcacaaaatgaggtgtaccgatactctttcttcataattttata 44522335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 252
Target Start/End: Complemental strand, 50258211 - 50258146
Alignment:
Q  188 taagggaactta-tacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttat 252  Q
    |||||||||||  ||||||||||||||||| ||||||||| ||||| || |||||| |||||||||    
T  50258211 taagggaactttctacggtacactcacaaaatgaggtgtatcggtattcatgcttcttaattttat 50258146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 54428900 - 54428839
Alignment:
Q  192 ggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||||| ||| ||||||||| ||| |||||||||||| |||||||| ||| ||||||||||    
T  54428900 ggaacttctactgtacactcataaaatgaggtgtaccgatactcctgtttcttaattttata 54428839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 29385092 - 29385020
Alignment:
Q  188 taagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| || |||||||||| ||||||| |||||||||||| ||||||| || ||||| |||||| |||||    
T  29385092 taagggaatttctacggtacacctcacaaattgaggtgtaccgatactccttctacataaatttataaattaa 29385020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 41217459 - 41217399
Alignment:
Q  193 gaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||| ||||||||||||||||| | |||||||  | |||||||||||| ||||||||||    
T  41217459 gaacttctacggtacactcacaaaataaggtgtattgatactcctgcttcttaattttata 41217399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 45602020 - 45602092
Alignment:
Q  187 ttaagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||||||||||| |||||||| |||| ||||||||| ||||| || |||||| ||| | |||| |||||    
T  45602020 ttaagggaacttatactgtacactcgcaaattgaggtgtatcggtattcttgcttcttaaatctataaattaa 45602092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 778223 - 778290
Alignment:
Q  1 tcttttggataaaatacaagtttgaacggcctctttggcgtttaaaaaggagagtgtgtgaaggagaa 68  Q
    ||||||||| ||||| |||||||| || ||||||||||| || ||||| || ||| ||||||||||||    
T  778223 tcttttggacaaaatgcaagtttggactgcctctttggctttcaaaaaagatagtatgtgaaggagaa 778290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 259
Target Start/End: Complemental strand, 15997226 - 15997159
Alignment:
Q  192 ggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||| ||||||||||||| ||  ||||||||||||||||||  || || |||||||||| |||||    
T  15997226 ggaacttctacggtacactcataagatgaggtgtaccggtactctcgcatcttaattttataaattaa 15997159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 259
Target Start/End: Complemental strand, 20199756 - 20199686
Alignment:
Q  189 aagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||| ||| |||||||||| ||||||| |||||||||||| |||| ||||||||||| |||||| |||||    
T  20199756 aagggagcttctacggtacacctcacaaattgaggtgtaccgatact-ctgcttcataaatttataaattaa 20199686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 259
Target Start/End: Original strand, 35389300 - 35389359
Alignment:
Q  200 tacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||| | ||||| |||||||||||| ||||| | ||||||||||||||| |||||    
T  35389300 tacggtacatttacaaaatgaggtgtaccgatactctttcttcataattttataaattaa 35389359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 19547895 - 19547849
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcct 237  Q
    |||||||| |||||||||| |||||| | ||||||||||||||||||    
T  19547895 gggaacttctacggtacacccacaaattaaggtgtaccggtactcct 19547849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 46507363 - 46507405
Alignment:
Q  193 gaacttatacggtacactcacaaagtgaggtgtaccggtactc 235  Q
    |||||| ||||||||||||||||| ||||||||| ||||||||    
T  46507363 gaacttctacggtacactcacaaaatgaggtgtatcggtactc 46507405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 51996422 - 51996488
Alignment:
Q  194 aacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||| |||||||||| ||||||| |||||||||||| ||||||| || ||||| |||||| |||||    
T  51996422 aacttctacggtacacatcacaaattgaggtgtaccgatactcctactacataaatttataaattaa 51996488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 5361054 - 5361107
Alignment:
Q  1 tcttttggataaaatacaagtttgaacggcctctttggcgtttaaaaaggagag 54  Q
    ||||||||||||||| |||||||| | ||| | |||| ||||||||||||||||    
T  5361054 tcttttggataaaatgcaagtttggatggcttttttgacgtttaaaaaggagag 5361107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 5529105 - 5529056
Alignment:
Q  186 attaagggaacttatacggtacactcacaaagtgaggtgtaccggtactc 235  Q
    ||||||||| ||| ||||||||||||  ||| ||||||||||||||||||    
T  5529105 attaagggagcttctacggtacactcttaaaatgaggtgtaccggtactc 5529056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 42623016 - 42622947
Alignment:
Q  191 gggaacttatacggtacact-cacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||| || ||||||||||| |||||| |||||||||||||||||| |  ||||||| |||||| |||||    
T  42623016 gggaaattttacggtacacttcacaaattgaggtgtaccggtactcttttttcataaatttataaattaa 42622947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 222 - 259
Target Start/End: Original strand, 45538676 - 45538713
Alignment:
Q  222 gtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||||||||||| |||||||||||||| |||||    
T  45538676 gtgtaccggtactcctgtttcataattttataaattaa 45538713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 50029754 - 50029819
Alignment:
Q  194 aacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||| || |||||||||| ||| | ||||||| ||||||||||||||| ||| |||||| |||||    
T  50029754 aacttctatggtacactcataaactaaggtgtatcggtactcctgcttcctaaatttatacattaa 50029819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 51756096 - 51756161
Alignment:
Q  194 aacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||| ||||||||||| | ||||||||||||| |||||||    ||||||||||||||| |||||    
T  51756096 aacttctacggtacacttataaagtgaggtgtatcggtactttcacttcataattttataaattaa 51756161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 52058514 - 52058571
Alignment:
Q  191 gggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcc-tgcttcataa 246  Q
    |||||||| |||||||||| ||||||| || |||||||||||||||| ||||||||||    
T  52058514 gggaacttctacggtacacctcacaaattggggtgtaccggtactccttgcttcataa 52058571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 20977414 - 20977366
Alignment:
Q  6 tggataaaatacaagtttgaacggcctctttggcgtttaaaaaggagag 54  Q
    |||||||||| |||||||||||||| | || ||| ||||||||||||||    
T  20977414 tggataaaatgcaagtttgaacggcgttttgggcatttaaaaaggagag 20977366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 25482251 - 25482319
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||| || ||||||||||| ||||  ||||||||||||||| || ||| || |||||||||| |||||    
T  25482251 gggaatttctacggtacacttacaagatgaggtgtaccggtattcttgcatcttaattttataaattaa 25482319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 39678489 - 39678445
Alignment:
Q  215 aagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||||||| ||||||| |||||| ||||||||||| |||||    
T  39678489 aagtgaggtgtatcggtacttctgctttataattttataaattaa 39678445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 5e-28; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 192 - 259
Target Start/End: Original strand, 23406653 - 23406720
Alignment:
Q  192 ggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23406653 ggaacttatacggtacactcacaaaatgaggtgtaccggtactcctgcttcataattttatatattaa 23406720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 190 - 259
Target Start/End: Original strand, 26605055 - 26605124
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||    
T  26605055 agggaacttctacggtacactcacaaaatgaggtgtaccggtactcttgcttcataattttataaattaa 26605124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 189 - 259
Target Start/End: Complemental strand, 15954669 - 15954599
Alignment:
Q  189 aagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||| | ||||||||||||||| |||||    
T  15954669 aagggaacttctacggtacactcacaaaatgaggtgtaccggtactctttcttcataattttataaattaa 15954599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 259
Target Start/End: Original strand, 35291327 - 35291394
Alignment:
Q  192 ggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||| ||||||||||||||||| |||||||||||||||||| | ||||||||||||||| |||||    
T  35291327 ggaacttctacggtacactcacaaaatgaggtgtaccggtactctttcttcataattttataaattaa 35291394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 46575100 - 46575163
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||||||| ||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||    
T  46575100 agggaacttctacggtacattcacaaaatgaggtgtaccggtactcctgcttcttaattttata 46575163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 3214932 - 3214859
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcc-----tgcttcataattttatatattaa 259  Q
    |||||||| |||||||||||||||||||||||||||||||||||||     ||||||||||||||||| |||||    
T  3214932 gggaacttctacggtacactcacaaagtgaggtgtaccggtactccagtcttgcttcataattttataaattaa 3214859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 15716310 - 15716250
Alignment:
Q  193 gaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||| ||||||||||||||||| |||||||||||||||||||| |||| ||||||||||    
T  15716310 gaacttctacggtacactcacaaaatgaggtgtaccggtactcctacttcttaattttata 15716250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 194 - 253
Target Start/End: Complemental strand, 30077044 - 30076985
Alignment:
Q  194 aacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||| ||||||||||||||||| |||||||| ||||||||||| |||| ||||||||||    
T  30077044 aacttttacggtacactcacaaaatgaggtgtgccggtactcctccttcttaattttata 30076985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 35358112 - 35358041
Alignment:
Q  188 taagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| || ||||||||||||||||| ||||||||||||||| || | ||| ||||||||||| |||||    
T  35358112 taagggaatttctacggtacactcacaaaatgaggtgtaccggtagtctttcttaataattttataaattaa 35358041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 189 - 259
Target Start/End: Complemental strand, 42584170 - 42584099
Alignment:
Q  189 aagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||||| |||||||||| ||||||| ||| |||||||| |||||||||||||||| |||||| |||||    
T  42584170 aagggaacttctacggtacacctcacaaattgatgtgtaccgatactcctgcttcataaatttataaattaa 42584099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 6791444 - 6791506
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||| ||||||||||| ||||| |||||||||||||||||| |  ||||||||||||||    
T  6791444 gggaacttctacggtacacttacaaaatgaggtgtaccggtactcttttttcataattttata 6791506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 21919687 - 21919741
Alignment:
Q  190 agggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttca 243  Q
    ||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  21919687 agggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgcttca 21919741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 29606268 - 29606330
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||| ||||||||||||||||| |||||||||| || |||| |||||| ||||||||||    
T  29606268 gggaacttctacggtacactcacaaaatgaggtgtactgggactcttgcttcttaattttata 29606330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 259
Target Start/End: Original strand, 41046836 - 41046906
Alignment:
Q  189 aagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||| || ||||||||||| |||||||||||||||||| ||||  ||||| ||||||||||| |||||    
T  41046836 aagggaatttctacggtacacttacaaagtgaggtgtaccgatactattgctttataattttataaattaa 41046906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 259
Target Start/End: Original strand, 32529179 - 32529248
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||| ||||||||||||||||| |||||  || |||||||| | ||||||||||||||| |||||    
T  32529179 agggaacttctacggtacactcacaaaatgaggcatatcggtactctttcttcataattttataaattaa 32529248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 41968435 - 41968500
Alignment:
Q  194 aacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||| ||||||||||||||||| ||||||||| |||||||| |  |||||||||||||| |||||    
T  41968435 aacttctacggtacactcacaaaatgaggtgtatcggtactcttttttcataattttataaattaa 41968500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 22967409 - 22967477
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||| | ||||||||||| | ||| |||||||||||||||||| | ||||||||||||||| |||||    
T  22967409 gggaacatttacggtacacttataaattgaggtgtaccggtactcttacttcataattttataaattaa 22967477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 24952928 - 24952988
Alignment:
Q  193 gaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||| ||||||||||||||||| |||| |||||||||| |||| |||| ||||||||||    
T  24952928 gaacttctacggtacactcacaaaatgagatgtaccggtattcctacttcttaattttata 24952988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 31743709 - 31743645
Alignment:
Q  190 agggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||||||| |||||||||| ||||||| || ||||||||||||||||||||||| || ||||||    
T  31743709 agggaacttctacggtacacctcacaaattgtggtgtaccggtactcctgcttcaaaaatttata 31743645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 241
Target Start/End: Complemental strand, 5215431 - 5215380
Alignment:
Q  191 gggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgctt 241  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||||||||||    
T  5215431 gggaacttctacggtacacatcacaaattgaggtgtaccggtactcctgctt 5215380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 243
Target Start/End: Original strand, 29688922 - 29688977
Alignment:
Q  189 aagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttca 243  Q
    |||||||||| |||||||||| ||| ||| ||||||||||||||||||||||||||    
T  29688922 aagggaacttctacggtacacctcataaattgaggtgtaccggtactcctgcttca 29688977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 38665456 - 38665519
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||||||| ||||||||||||||||| ||| ||||||||||||||| | | | ||||||||||    
T  38665456 agggaacttctacggtacactcacaaaatgaagtgtaccggtactccggttccttaattttata 38665519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 47642906 - 47642843
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||||||| ||||||||||||||||| |||| ||||||  ||||| |||||| ||||||||||    
T  47642906 agggaacttctacggtacactcacaaaatgagatgtaccaatactcatgcttcttaattttata 47642843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 7574551 - 7574613
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||| ||||||||||||  ||| | |||||||||| |||||||||||| ||||||||||    
T  7574551 gggaacttctacggtacactcgtaaaataaggtgtaccgatactcctgcttcttaattttata 7574613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 11750419 - 11750481
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||| ||||||||||||||||| | || ||||  |||||||||||||| ||||||||||    
T  11750419 gggaacttctacggtacactcacaaaataagatgtattggtactcctgcttcttaattttata 11750481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 17306603 - 17306661
Alignment:
Q  193 gaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataatttta 251  Q
    |||||| || ||||||||||||||||||| |||||||||||||  ||||||| ||||||    
T  17306603 gaacttctatggtacactcacaaagtgagatgtaccggtactctcgcttcatgatttta 17306661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 23110430 - 23110492
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||| |||||||||||||||||||| |||| ||||| |||||||||| ||  ||||||||||    
T  23110430 gggaatttatacggtacactcacaaaatgagatgtactggtactcctgttttttaattttata 23110492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 28264750 - 28264812
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||| ||||||||||||  ||| | |||||||||| |||||||||||| ||||||||||    
T  28264750 gggaacttctacggtacactcgtaaaataaggtgtaccgatactcctgcttcttaattttata 28264812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 5582861 - 5582905
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactc 235  Q
    |||||||| ||||||||||||||||||||| ||||| ||||||||    
T  5582861 gggaacttctacggtacactcacaaagtgatgtgtatcggtactc 5582905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 18520323 - 18520275
Alignment:
Q  189 aagggaacttatacggtacactcacaaagtgaggtgtaccggtactcct 237  Q
    |||||||||| || |||||||||||||| |||| |||||||||||||||    
T  18520323 aagggaacttttatggtacactcacaaaatgagatgtaccggtactcct 18520275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 32413686 - 32413598
Alignment:
Q  1 tcttttggataaaatacaagtttgaacggcctctttggcgtttaaaaaggagagtgtgtgaaggagaatacaatgggataaatcactga 89  Q
    |||| |||| ||||| |||||||||||||| | ||||| ||| ||| |||||||| ||||||| | || |||||  |||||||||||||    
T  32413686 tcttgtggacaaaatgcaagtttgaacggcgtgtttggtgttcaaagaggagagtatgtgaagtaaaacacaatcagataaatcactga 32413598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 37504559 - 37504627
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||| ||| ||||||||||||||||| |||||||||| | ||||| |  |||||||||||||| |||||    
T  37504559 gggatcttctacggtacactcacaaaatgaggtgtactgatactctttattcataattttataaattaa 37504627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 18990499 - 18990448
Alignment:
Q  186 attaagggaacttatacggtacactcacaaagtgaggtgtaccggtactcct 237  Q
    ||||||||||||| |||||||||| | |||| | ||||||||||||||||||    
T  18990499 attaagggaacttctacggtacacccgcaaattaaggtgtaccggtactcct 18990448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 259
Target Start/End: Original strand, 38882816 - 38882887
Alignment:
Q  189 aagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||||| |||||||||| | ||||| |||||||||||||||||| ||||| |||| || ||| |||||    
T  38882816 aagggaacttctacggtacacctaacaaaatgaggtgtaccggtactcttgctttataaattgataaattaa 38882887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 259
Target Start/End: Original strand, 30936092 - 30936162
Alignment:
Q  189 aagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||||| |||||||||| | |||| | |||||||||||||||| | ||||| || |||||| |||||    
T  30936092 aagggaacttctacggtacacccgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaa 30936162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 15591791 - 15591730
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttat 252  Q
    |||||||| ||||||||| ||| ||| | ||||||||||||||| ||||||| ||| |||||    
T  15591791 gggaacttttacggtacattcataaattaaggtgtaccggtacttctgcttcctaaatttat 15591730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 23182390 - 23182443
Alignment:
Q  191 gggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttca 243  Q
    |||||||| |||||||||| ||||||| | |||||||| |||||||||||||||    
T  23182390 gggaacttctacggtacacctcacaaattaaggtgtactggtactcctgcttca 23182443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 251
Target Start/End: Original strand, 26413640 - 26413686
Alignment:
Q  203 ggtacactcacaaagtgaggtgtaccggtactcctgcttcataatttta 251  Q
    |||||||| |||||||||||||  | |||||||||||||||||||||||    
T  26413640 ggtacacttacaaagtgaggtg--ctggtactcctgcttcataatttta 26413686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 259
Target Start/End: Complemental strand, 30891664 - 30891595
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||||  |||| ||| ||||||| | |||||||||| ||||| | ||||||||||||||| |||||    
T  30891664 agggaacttcaacggcacaatcacaaaataaggtgtaccgatactctttcttcataattttataaattaa 30891595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 48460251 - 48460304
Alignment:
Q  191 gggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttca 243  Q
    |||||||| || ||||||| ||||||| |||||| |||||||||||||||||||    
T  48460251 gggaacttctatggtacacctcacaaattgaggtataccggtactcctgcttca 48460304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 23585623 - 23585667
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtact 234  Q
    ||||||||| |||||||||||| | |||||||||||||| |||||    
T  23585623 agggaacttctacggtacactcgctaagtgaggtgtaccagtact 23585667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 24812486 - 24812422
Alignment:
Q  189 aagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||||| |||| |||||| ||||| | ||||||| ||||||||||| ||  ||||||||||    
T  24812486 aagggaacttctacgatacactaacaaaataaggtgtatcggtactcctgttttttaattttata 24812422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 253
Target Start/End: Complemental strand, 38666262 - 38666214
Alignment:
Q  205 tacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||| ||||| ||||||||||||||||||||| ||  ||||||||||    
T  38666262 tacacttacaaaatgaggtgtaccggtactcctgttttttaattttata 38666214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 41769305 - 41769349
Alignment:
Q  209 ctcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||| ||| |||||||||| ||||||||||||||| |||||||||    
T  41769305 ctcataaattgaggtgtactggtactcctgcttcaaaattttata 41769349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 43631054 - 43631110
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataa 246  Q
    ||||||||| || |||||||||  | | |||||||||||||||||| ||||||||||    
T  43631054 agggaacttctatggtacactcgtagattgaggtgtaccggtactcttgcttcataa 43631110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 45857475 - 45857543
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| |||||||||| | |||| | |||||||||||||||| | ||||| || |||||| |||||    
T  45857475 gggaacttttacggtacacccgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaa 45857543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 189 - 259
Target Start/End: Complemental strand, 4509837 - 4509767
Alignment:
Q  189 aagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4509837 aagggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaa 4509767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 23069108 - 23069044
Alignment:
Q  189 aagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23069108 aagggaacttttacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 23069044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 190 - 259
Target Start/End: Complemental strand, 33574760 - 33574691
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  33574760 agggaacttctacggtacactcacaaagtgaggtgtaccggtactcttgcttcataattttataaattaa 33574691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 190 - 259
Target Start/End: Complemental strand, 33574938 - 33574869
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  33574938 agggaacttctacggtacactcacaaagtgaggtgtaccggtactcttgcttcataattttataaattaa 33574869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 192 - 259
Target Start/End: Original strand, 11763174 - 11763241
Alignment:
Q  192 ggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  11763174 ggaacttctacggtacactcacagagtgaggtgtaccggtactcctgcttcataattttataaattaa 11763241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 23416904 - 23416841
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  23416904 agggaacttctacggtacactcacaaaatgaggtgtaccggtactcctgcttcttaattttata 23416841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 189 - 259
Target Start/End: Complemental strand, 18772268 - 18772198
Alignment:
Q  189 aagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||||| ||||||||||||||||||||| ||||| |||||||||| ||||||||||||||| |||||    
T  18772268 aagggaacttctacggtacactcacaaagtgaagtgtatcggtactcctacttcataattttataaattaa 18772198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 33574233 - 33574295
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  33574233 gggaatttatacggtacactcacaaaatgaggtgtaccggtactcctgcttcttaattttata 33574295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 259
Target Start/End: Original strand, 8549561 - 8549631
Alignment:
Q  189 aagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||||| ||||||||||||||||| |||||||||||| ||||| |  |||||||||||||| |||||    
T  8549561 aagggaacttctacggtacactcacaaaatgaggtgtaccgatactcttttttcataattttataaattaa 8549631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 2565434 - 2565395
Alignment:
Q  214 aaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2565434 aaagtgaggtgtaccggtactcctgcttcataattttata 2565395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 10966032 - 10965977
Alignment:
Q  189 aagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttca 243  Q
    |||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  10966032 aagggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgcttca 10965977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 259
Target Start/End: Complemental strand, 14779310 - 14779241
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||| ||| ||||||||||||| ||||| |||||||||||| |  |||||||||||||| |||||    
T  14779310 agggaacttctacagtacactcacaaaatgaggggtaccggtactcttttttcataattttataaattaa 14779241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 29023618 - 29023674
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataa 246  Q
    ||||||||| ||||||||||||  ||| |||||||||||||||||| ||||||||||    
T  29023618 agggaacttctacggtacactcgtaaattgaggtgtaccggtactcttgcttcataa 29023674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 259
Target Start/End: Complemental strand, 9687180 - 9687114
Alignment:
Q  193 gaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||| ||||||||||||||||| ||||||||| || ||||| | |||| |||||||||| |||||    
T  9687180 gaacttctacggtacactcacaaaatgaggtgtatcgatactctttcttcttaattttataaattaa 9687114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 1339785 - 1339720
Alignment:
Q  185 tattaagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattt 249  Q
    |||| ||||||||| |||||||||| ||||||| ||||||||||| ||||| |||||||| |||||    
T  1339785 tatttagggaacttctacggtacacgtcacaaattgaggtgtaccagtacttctgcttcaaaattt 1339720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 1706012 - 1705959
Alignment:
Q  191 gggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttca 243  Q
    |||||||| |||||||||| ||| ||| ||||||||||||||||||||||||||    
T  1706012 gggaacttctacggtacacctcataaattgaggtgtaccggtactcctgcttca 1705959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 259
Target Start/End: Complemental strand, 9662165 - 9662096
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||| ||||||||||||| ||  ||||||||| |||||||| ||| || |||||||||| |||||    
T  9662165 agggaacttctacggtacactcataagatgaggtgtatcggtactcttgcatcttaattttataaattaa 9662096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 253
Target Start/End: Original strand, 10887803 - 10887872
Alignment:
Q  185 tattaagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||| |||||||| |||||||||| ||| ||| |||||||||||||||||||| ||||| || ||||||    
T  10887803 tattatgggaacttctacggtacacctcataaattgaggtgtaccggtactcctacttcaaaaatttata 10887872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 14508027 - 14507974
Alignment:
Q  191 gggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttca 243  Q
    |||||||| |||||||||| ||| ||| ||||||||||||||||||||||||||    
T  14508027 gggaacttctacggtacacctcataaattgaggtgtaccggtactcctgcttca 14507974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 19474078 - 19474025
Alignment:
Q  191 gggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttca 243  Q
    |||||||| |||||||||| ||||||| |||||||||||||||||| |||||||    
T  19474078 gggaacttctacggtacacctcacaaattgaggtgtaccggtactcttgcttca 19474025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 24249216 - 24249159
Alignment:
Q  187 ttaagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttca 243  Q
    |||||||||||| |||||||||| | ||||| ||||||||| ||||||||||||||||    
T  24249216 ttaagggaacttctacggtacaccttacaaattgaggtgtatcggtactcctgcttca 24249159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 242885 - 242953
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| ||||||||||||| ||  |||||||||||| ||||| ||| || |||||||||| |||||    
T  242885 gggaacttctacggtacactcataagatgaggtgtaccgatactcttgcatcttaattttataaattaa 242953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 3141040 - 3141104
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatata 255  Q
    |||||||| || |||||||||||||| |||||||||  | |||||||||||| ||||| ||||||    
T  3141040 gggaacttctatggtacactcacaaaatgaggtgtattgatactcctgcttcttaattatatata 3141104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 4576791 - 4576723
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| ||  ||| ||||||||| |||||||||||||||||| |  |||||||||||||| |||||    
T  4576791 gggaacttctattgtagactcacaaaatgaggtgtaccggtactcttttttcataattttataaattaa 4576723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 6295787 - 6295716
Alignment:
Q  188 taagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||| ||| |||||||||| ||||||| ||||||||| |||||||| |||||||||| |||||| |||||    
T  6295787 taagggagcttctacggtacacctcacaaattgaggtgtatcggtactc-tgcttcataaatttataaattaa 6295716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 6302597 - 6302526
Alignment:
Q  188 taagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||| ||| |||||||||| ||||||| ||||||||| |||||||| |||||||||| |||||| |||||    
T  6302597 taagggagcttctacggtacacctcacaaattgaggtgtatcggtactc-tgcttcataaatttataaattaa 6302526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 22755630 - 22755586
Alignment:
Q  209 ctcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||||||||||||||| |||||| | |||||||||||||||    
T  22755630 ctcacaaagtgaggtgtacccgtactcttccttcataattttata 22755586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 31644410 - 31644465
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataa 246  Q
    |||||||| ||||||||||||  ||| ||||||||| |||||||| ||||||||||    
T  31644410 gggaacttctacggtacactcgtaaattgaggtgtatcggtactcttgcttcataa 31644465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 21294197 - 21294143
Alignment:
Q  190 agggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttca 243  Q
    ||||||||  |||||||||| ||| ||| ||||||||||||||||||||||||||    
T  21294197 agggaactcctacggtacacctcataaattgaggtgtaccggtactcctgcttca 21294143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 2994322 - 2994375
Alignment:
Q  191 gggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttca 243  Q
    |||||||| ||| |||||| ||| ||| ||||||||||||||||||||||||||    
T  2994322 gggaacttctacagtacacctcataaattgaggtgtaccggtactcctgcttca 2994375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 259
Target Start/End: Original strand, 229820 - 229879
Alignment:
Q  200 tacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||||| ||||||| |||||||||||| |||| ||||||||||| |||||| |||||    
T  229820 tacggtacacctcacaaattgaggtgtaccgatact-ctgcttcataaatttataaattaa 229879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 21970717 - 21970669
Alignment:
Q  187 ttaagggaacttatacggtacactcacaaagtgaggtgtaccggtactc 235  Q
    |||||||||||| ||||||||||||| ||| |  |||||||||||||||    
T  21970717 ttaagggaacttctacggtacactcataaattctggtgtaccggtactc 21970669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0923 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0923
Description:

Target: scaffold0923; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 91 - 23
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  91 gggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaa 23  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 3e-26; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 185 - 253
Target Start/End: Complemental strand, 38261215 - 38261147
Alignment:
Q  185 tattaagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  38261215 tattaagggaacttctacggtacactcataaagtgaggtgtaccggtactcctgcttcataattttata 38261147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 193 - 259
Target Start/End: Original strand, 34038163 - 34038229
Alignment:
Q  193 gaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  34038163 gaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaa 34038229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 44264067 - 44263995
Alignment:
Q  187 ttaagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  44264067 ttaagggaacatctacggtacactcacaaagtgaggtgtaccggtactcctgtttcataattttataaattaa 44263995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 48976871 - 48976943
Alignment:
Q  187 ttaagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  48976871 ttaagggaacttctacggcacactcacaaagtgaggtgtatcggtactcctgcttcataattttataaattaa 48976943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 35873933 - 35874004
Alignment:
Q  188 taagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||    
T  35873933 taagggaacttctacggtacactcacaaagtgagatgtaccggtacttctgcttcataattttataaattaa 35874004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 189 - 259
Target Start/End: Complemental strand, 9588052 - 9587982
Alignment:
Q  189 aagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||    
T  9588052 aagggaacttctacggtacactcataaagtgaggtataccggtactcctgcttcataattttataaattaa 9587982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 185 - 259
Target Start/End: Original strand, 12105154 - 12105228
Alignment:
Q  185 tattaagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||| ||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||    
T  12105154 tatttagggaacttctacggtacactcacaaaatgaggtgtaccggtactcttgcttcataattttataaattaa 12105228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 189 - 259
Target Start/End: Original strand, 52345597 - 52345667
Alignment:
Q  189 aagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||    
T  52345597 aagggaacttctacggtacactcacaaagtgaggtgtaccggtactcttgtttcataattttataaattaa 52345667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 190 - 259
Target Start/End: Original strand, 24230568 - 24230637
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||    
T  24230568 agggaacttctacggtacactcacaaagtgaggtgtaatggtactcctgcttcataattttataaattaa 24230637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 10408701 - 10408643
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattt 249  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  10408701 gggaacttctacggtacactcacaaagtgaggtgtaccggtacttctgcttcataattt 10408643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 193 - 259
Target Start/End: Complemental strand, 52180637 - 52180571
Alignment:
Q  193 gaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  52180637 gaacttctatggtatactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaa 52180571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 45622479 - 45622542
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||| |||| ||||||||||    
T  45622479 agggaacttatacgttacactcacaaaatgaggtgtaccggtactcctacttcttaattttata 45622542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 25702435 - 25702497
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||| ||||||||||||| ||| |||||||||||||||||| |||||||||||||||||    
T  25702435 gggaacttctacggtacactcataaattgaggtgtaccggtactcttgcttcataattttata 25702497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 31821571 - 31821633
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||| ||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||    
T  31821571 gggaacttctacggtacactcacaaaatgaggtgtagcggtactcctgcttcttaattttata 31821633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 191 - 253
Target Start/End: Complemental strand, 46641923 - 46641861
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||| |||||||||||| |||| ||||||||||||||||||||||||| ||||||||||    
T  46641923 gggaacttctacggtacactcgcaaaatgaggtgtaccggtactcctgcttcttaattttata 46641861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 42275338 - 42275403
Alignment:
Q  194 aacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||| || |||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||    
T  42275338 aacttctaaggtacactcagaaagtgaggtgtaccggtactcatgcttcataattttataaattaa 42275403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 47544702 - 47544641
Alignment:
Q  192 ggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||||| || |||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  47544702 ggaacttctatggtacactcacaaaatgaggtgtaccggtactcctgcttcttaattttata 47544641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 51056606 - 51056545
Alignment:
Q  187 ttaagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataatt 248  Q
    |||||| ||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  51056606 ttaaggaaacttctacggtacaatcacaaagtgagatgtaccggtactcctgcttcataatt 51056545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 31530307 - 31530375
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| ||| ||||||| ||||| |||||||||| ||||||||||||||||||||||||| |||||    
T  31530307 gggaacttctaccgtacacttacaaaatgaggtgtactggtactcctgcttcataattttataaattaa 31530375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 47693593 - 47693537
Alignment:
Q  203 ggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||    
T  47693593 ggtacactcacaaaatgaggtgtaccggtactcttgcttcataattttataaattaa 47693537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 253
Target Start/End: Original strand, 52861300 - 52861359
Alignment:
Q  194 aacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||| ||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||    
T  52861300 aacttttacggtacactcacaaaatgaggtgtaccggtacttctgcttcttaattttata 52861359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 24003419 - 24003481
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||| ||||||||||| ||||| |||||||| |||||||||||||||| ||||||||||    
T  24003419 gggaacttctacggtacactaacaaaatgaggtgttccggtactcctgcttcttaattttata 24003481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 28624888 - 28624822
Alignment:
Q  187 ttaagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||||||| ||||||||||| ||||||||||||||||| |||||| | ||| |||||||||||    
T  28624888 ttaagggaacttctacggtacacttacaaagtgaggtgtacccgtactcttcctttataattttata 28624822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 10348025 - 10348089
Alignment:
Q  189 aagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||||| ||||||||||||||||| | | |||||||| |||||||||||| ||||||||||    
T  10348025 aagggaacttctacggtacactcacaaaataaagtgtaccgatactcctgcttcttaattttata 10348089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 46235242 - 46235170
Alignment:
Q  187 ttaagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||||||| ||||||||||| ||||| |||||||||| ||||| | | ||||||||||||||| |||||    
T  46235242 ttaagggaacttctacggtacacttacaaaatgaggtgtactggtaccctttcttcataattttataaattaa 46235170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 192 - 259
Target Start/End: Original strand, 7227571 - 7227638
Alignment:
Q  192 ggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||| |||||||||||||||||||| ||||||||| || ||||| | ||||||||||||||| |||||    
T  7227571 ggaatttatacggtacactcacaaaatgaggtgtatcgatactctttcttcataattttataaattaa 7227638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 8396756 - 8396693
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||| || ||||||||||||| ||| ||||||||| ||||||||||||||| ||||||||||    
T  8396756 agggaatttctacggtacactcataaaatgaggtgtatcggtactcctgcttcttaattttata 8396693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 2249587 - 2249649
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||| | ||||||||||||||| ||||||||| ||||||||||| ||| ||||||||||    
T  2249587 gggaacttctgcggtacactcacaaaatgaggtgtatcggtactcctgtttcttaattttata 2249649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 13202936 - 13202998
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||| ||| ||||||||| ||| ||||||||||||||||||||| ||| ||||||||||    
T  13202936 gggaacttctactgtacactcagaaaatgaggtgtaccggtactcctgtttcttaattttata 13202998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 259
Target Start/End: Complemental strand, 24381724 - 24381658
Alignment:
Q  193 gaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||| |||||||||||||||||| || ||||||||||||||  | |||||||||||||| |||||    
T  24381724 gaacttctacggtacactcacaaagcgaagtgtaccggtactctcgtttcataattttataaattaa 24381658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 40054995 - 40054941
Alignment:
Q  190 agggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttca 243  Q
    ||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  40054995 agggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgcttca 40054941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 6966306 - 6966253
Alignment:
Q  200 tacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||||||||||||||| ||||||||||||||||||||  ||| ||||||||||    
T  6966306 tacggtacactcacaaaatgaggtgtaccggtactcctcattcttaattttata 6966253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 43916346 - 43916399
Alignment:
Q  191 gggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttca 243  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  43916346 gggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgcttca 43916399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 12179005 - 12178937
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| |||||||||||| |||| |||||||||||||||||| |||||| ||| | |||| |||||    
T  12179005 gggaacttttacggtacactcgcaaattgaggtgtaccggtactcttgcttcctaaatctataaattaa 12178937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 14152687 - 14152755
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| ||||||| ||||||||| | |||| ||||||||||| ||||| ||||||||||| |||||    
T  14152687 gggaacttctacggtatactcacaaaataaggtataccggtactcttgcttaataattttataaattaa 14152755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 21883218 - 21883150
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||| | ||||||||||| | ||| |||||||||||||||||| | ||||||||||||||| |||||    
T  21883218 gggaacatttacggtacacttataaattgaggtgtaccggtactcttacttcataattttataaattaa 21883150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 24511986 - 24511923
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||| || ||||||||||||  ||| |||||||||||||||||| |||||||||| ||||||    
T  24511986 agggaatttctacggtacactcgtaaattgaggtgtaccggtactcttgcttcataaatttata 24511923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 253
Target Start/End: Complemental strand, 38718135 - 38718076
Alignment:
Q  194 aacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||| ||||||||||||||||| ||||||||| |||||||||| |||  ||||||||||    
T  38718135 aacttctacggtacactcacaaaatgaggtgtatcggtactcctccttattaattttata 38718076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 6526428 - 6526486
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattt 249  Q
    ||||| || |||||||||||||||||||||||||||||| |||||  | ||||||||||    
T  6526428 gggaatttctacggtacactcacaaagtgaggtgtaccgatactctcgtttcataattt 6526486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 7435925 - 7435867
Alignment:
Q  186 attaagggaacttatacggtaca-ctcacaaagtgaggtgtaccggtactcctgcttca 243  Q
    ||||||||||||| ||||||||| |||||||| ||||||||| |||||||||| |||||    
T  7435925 attaagggaacttctacggtacacctcacaaattgaggtgtatcggtactcctccttca 7435867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 30320890 - 30320952
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||| ||||||||||||  ||| | |||||||||| |||||||||||| ||||||||||    
T  30320890 gggaacttctacggtacactcgtaaaataaggtgtaccgatactcctgcttcttaattttata 30320952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 1845073 - 1845126
Alignment:
Q  191 gggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttca 243  Q
    |||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||    
T  1845073 gggaacttctacggtgcacctcacaaattgaggtgtaccggtactcctgcttca 1845126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 44808811 - 44808758
Alignment:
Q  191 gggaacttatacggtaca-ctcacaaagtgaggtgtaccggtactcctgcttca 243  Q
    |||||||| ||||||||| |||||||| |||||||||||| |||||||||||||    
T  44808811 gggaacttctacggtacatctcacaaattgaggtgtaccgatactcctgcttca 44808758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 46362023 - 46362091
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| ||||||||| ||||||| |||||||||||||||| | |  ||| |||||||||| |||||    
T  46362023 gggaacttctacggtacattcacaaaatgaggtgtaccggtacccttttttcgtaattttataaattaa 46362091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 51004789 - 51004853
Alignment:
Q  190 agggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||| || |||||||||| ||||||| |||||||||||||||||||| ||||| || ||||||    
T  51004789 agggaatttctacggtacacctcacaaattgaggtgtaccggtactcctacttcaaaaatttata 51004853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 51787464 - 51787532
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| ||||||||||||| ||  ||||||||| |||||||| ||| || |||||||||| |||||    
T  51787464 gggaacttctacggtacactcataagatgaggtgtatcggtactcttgcatcttaattttataaattaa 51787532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 259
Target Start/End: Original strand, 477451 - 477510
Alignment:
Q  200 tacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||||||||||| |||||| || |||||||| |  |||||||||||||| |||||    
T  477451 tacggtacactcacaaaatgaggtctatcggtactcttttttcataattttataaattaa 477510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 48760467 - 48760424
Alignment:
Q  194 aacttatacggtacactcacaaagtgaggtgtaccggtactcct 237  Q
    ||||| ||||||||||||||||| |||||| |||||||||||||    
T  48760467 aacttctacggtacactcacaaaatgaggtataccggtactcct 48760424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 259
Target Start/End: Original strand, 49982454 - 49982525
Alignment:
Q  189 aagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||||| |||||||||| ||| ||| |||||||||||| ||||||||||  |||| |||||| |||||    
T  49982454 aagggaacttctacggtacacctcataaattgaggtgtaccgatactcctgctatataaatttataaattaa 49982525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 259
Target Start/End: Original strand, 17553818 - 17553884
Alignment:
Q  193 gaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||||| ||||||||||||| |||| |||||| ||| |  | ||||||||||||||| |||||    
T  17553818 gaacttataccgtacactcacaaaatgagatgtacctgtattttttcttcataattttataaattaa 17553884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 253
Target Start/End: Complemental strand, 21073207 - 21073147
Alignment:
Q  194 aacttatacggtacactcacaaagtgag--gtgtaccggtactcctgcttcataattttata 253  Q
    ||||| ||||||||| ||| ||||||||  |||||||| |||||||||||||||||||||||    
T  21073207 aacttctacggtacattcataaagtgagaggtgtaccg-tactcctgcttcataattttata 21073147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 23061414 - 23061364
Alignment:
Q  185 tattaagggaacttatacggtacactcacaaagtgaggtgtaccggtactc 235  Q
    |||||||||||||| |||||||||| | |||| | ||||||||||||||||    
T  23061414 tattaagggaacttctacggtacacccgcaaattaaggtgtaccggtactc 23061364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 6468793 - 6468842
Alignment:
Q  193 gaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttc 242  Q
    |||||| ||||||||||||||||| | | | |||||||||||||||||||    
T  6468793 gaacttctacggtacactcacaaaataaagcgtaccggtactcctgcttc 6468842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 30548014 - 30547961
Alignment:
Q  193 gaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataa 246  Q
    |||||| ||||||||||||  ||| |||||||||| ||||||| ||||||||||    
T  30548014 gaacttctacggtacactcgtaaattgaggtgtacaggtactcttgcttcataa 30547961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 253
Target Start/End: Complemental strand, 30571386 - 30571353
Alignment:
Q  220 aggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||||||||||| |||||||||||||||||    
T  30571386 aggtgtaccggtactcttgcttcataattttata 30571353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 47458934 - 47458866
Alignment:
Q  191 gggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||| ||| |||||||||| ||||||| |||||||||||| |||| ||||||||||| |||||| |||||    
T  47458934 gggagcttctacggtacacctcacaaattgaggtgtaccgatact-ctgcttcataaatttataaattaa 47458866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 259
Target Start/End: Original strand, 50239276 - 50239345
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||| |||||||||| | |||| | |||||||||||||||| | ||||| || |||||| |||||    
T  50239276 agggaacttctacggtacacccgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaa 50239345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 23539940 - 23539992
Alignment:
Q  189 aagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgct 240  Q
    |||||||||| |||||||||| ||| ||| |||||||||||||||||| ||||    
T  23539940 aagggaacttctacggtacacctcagaaattgaggtgtaccggtactcttgct 23539992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 32144669 - 32144737
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| || |||||||||| ||| | ||||||| ||||| |||||||||  || ||||||||||||    
T  32144669 gggaacttctatggtacactcataaattaaggtgtatcggtattcctgcttccaaaatttatatattaa 32144737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 33910096 - 33910044
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttca 243  Q
    ||||| || |||||||||| |||||| | |||||||||||||||||| |||||    
T  33910096 gggaatttctacggtacacccacaaattaaggtgtaccggtactcctacttca 33910044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 50533901 - 50533972
Alignment:
Q  188 taagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||| ||| |||||||||| ||||||| ||||||||| || ||||| |||||||||| |||||| |||||    
T  50533901 taagggagcttctacggtacacctcacaaattgaggtgtatcgatactc-tgcttcataaatttataaattaa 50533972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 35895308 - 35895379
Alignment:
Q  188 taagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  35895308 taagggaacttttacggtacactcataaagtgaggtgtaccggtactcctgcttcataattttataaattaa 35895379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 7673291 - 7673357
Alignment:
Q  187 ttaagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  7673291 ttaagggaacttctacggtacactcacaaaatgaggtgtaccggtactcctgcttcttaattttata 7673357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 188 - 252
Target Start/End: Original strand, 1580244 - 1580308
Alignment:
Q  188 taagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttat 252  Q
    |||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1580244 taagggaatttctacggtacactcacaaagtgaggtgtaccggtactcttgcttcataattttat 1580308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 32602301 - 32602365
Alignment:
Q  189 aagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  32602301 aagggaacttctacggtacactcacaaaatgaggtgtaccggtactcctgcttcttaattttata 32602365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 25331454 - 25331517
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  25331454 agggaacttctacggtacactcacaaaatgaggtgtaccggtactcctgcttcttaattttata 25331517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 30981292 - 30981224
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||| || ||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  30981292 gggaatttttacggtacactcacaaagtgaggtgtatcggtactcccgcttcataattttataaattaa 30981224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 9589521 - 9589458
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||| |||| ||||| ||||    
T  9589521 agggaacttctacggtacactcacaaaatgaggtgtaccggtactcctacttcttaattatata 9589458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 253
Target Start/End: Original strand, 17451285 - 17451344
Alignment:
Q  194 aacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||| ||||||||||||||||| | ||||||||||||||||||||||| ||||||||||    
T  17451285 aacttctacggtacactcacaaaataaggtgtaccggtactcctgcttcttaattttata 17451344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 9122156 - 9122218
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||| ||||||||||||||||| | ||||||||||||||| ||||||| ||||||||||    
T  9122156 gggaacttctacggtacactcacaaaataaggtgtaccggtacttctgcttcttaattttata 9122218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 32401075 - 32401141
Alignment:
Q  187 ttaagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||||||| ||||||||||||||||  |||||||||||||||||| ||| || ||||||||||    
T  32401075 ttaagggaacttctacggtacactcacaagatgaggtgtaccggtactcttgcatcttaattttata 32401141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 259
Target Start/End: Original strand, 38073100 - 38073175
Alignment:
Q  185 tattaagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||| |||||||| |||||||||| ||||||| |||||||||||||||||| | |||||||| |||||| |||||    
T  38073100 tattatgggaacttctacggtacacctcacaaattgaggtgtaccggtactcttacttcataaatttataaattaa 38073175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 189 - 243
Target Start/End: Original strand, 41555429 - 41555484
Alignment:
Q  189 aagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttca 243  Q
    |||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  41555429 aagggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgcttca 41555484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 21404198 - 21404260
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||| ||||||||||||||||| |||||||||||| ||||||| |||| ||||| ||||    
T  21404198 gggaacttctacggtacactcacaaaatgaggtgtaccgatactcctacttcttaattatata 21404260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 253
Target Start/End: Complemental strand, 39620926 - 39620864
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||| ||||||||||| ||||||| |||||||||| |||| |||||| |||||||||||    
T  39620926 gggaacttctacggtacactaacaaagtaaggtgtaccgatacttctgctttataattttata 39620864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 43439995 - 43440057
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||| ||||| ||||||||||| |||||||||||| |||| ||||||| ||||||||||    
T  43439995 gggaacttctacggcacactcacaaaatgaggtgtaccgatacttctgcttcttaattttata 43440057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 259
Target Start/End: Complemental strand, 45157918 - 45157852
Alignment:
Q  193 gaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||| ||||||||||||||||| |||||||||||| ||||| | |||||||| |||||| |||||    
T  45157918 gaacttctacggtacactcacaaaatgaggtgtaccgatactctttcttcataagtttataaattaa 45157852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 43864075 - 43864148
Alignment:
Q  1 tcttttggataaaatacaagtttgaacggcctctttggcgtttaaaaaggagagtgtgtgaaggagaatacaat 74  Q
    ||||||||| ||||| |||||||||||||||| ||| || || |||||||| ||| |||||| |||||||||||    
T  43864075 tcttttggacaaaatgcaagtttgaacggccttttttgcattcaaaaaggacagtatgtgaatgagaatacaat 43864148  T

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Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 43867566 - 43867639
Alignment:
Q  1 tcttttggataaaatacaagtttgaacggcctctttggcgtttaaaaaggagagtgtgtgaaggagaatacaat 74  Q
    ||||||||| ||||| ||||||||| |||||||||| ||||| |||||||| |||  ||||| |||||||||||    
T  43867566 tcttttggacaaaatgcaagtttgagcggcctcttttgcgttcaaaaaggacagtacgtgaatgagaatacaat 43867639  T

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Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 43875242 - 43875315
Alignment:
Q  1 tcttttggataaaatacaagtttgaacggcctctttggcgtttaaaaaggagagtgtgtgaaggagaatacaat 74  Q
    ||||||||| ||||| |||||||||||| ||||||| || ||||||||||| | | |||||| |||||||||||    
T  43875242 tcttttggacaaaatgcaagtttgaacgacctcttttgcatttaaaaaggacactatgtgaatgagaatacaat 43875315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 259
Target Start/End: Complemental strand, 33493877 - 33493810
Alignment:
Q  192 ggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||| ||||||||||||||||  ||||||||||| |||||| ||| || |||||||||| |||||    
T  33493877 ggaacttttacggtacactcacaagatgaggtgtaccagtactcttgcatcttaattttataaattaa 33493810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 251
Target Start/End: Complemental strand, 3261314 - 3261252
Alignment:
Q  189 aagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataatttta 251  Q
    |||||||||| ||||||||| ||| |||||||| |||||||||||||  ||||||| ||||||    
T  3261314 aagggaacttctacggtacattcataaagtgagatgtaccggtactctcgcttcatgatttta 3261252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 259
Target Start/End: Complemental strand, 6945746 - 6945680
Alignment:
Q  193 gaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||| ||||||||||||| ||  |||||||||||||||||| ||| || |||||||||| |||||    
T  6945746 gaacttctacggtacactcataagatgaggtgtaccggtactcttgcatcttaattttataaattaa 6945680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 8333890 - 8333948
Alignment:
Q  190 agggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcc-tgcttcataa 246  Q
    ||||||||| |||||||||| ||||||| ||||||||||||||||||| ||||||||||    
T  8333890 agggaacttctacggtacacctcacaaattgaggtgtaccggtactccttgcttcataa 8333948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 259
Target Start/End: Complemental strand, 40495855 - 40495785
Alignment:
Q  189 aagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||||| ||| ||||||||||||| ||||||| |||| |||| ||| ||| |||||||||| |||||    
T  40495855 aagggaacttctactgtacactcacaaaatgaggtgcaccgatacttctgtttcttaattttataaattaa 40495785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 259
Target Start/End: Original strand, 40946764 - 40946830
Alignment:
Q  193 gaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||| ||||||||||||| |||||| | ||||||||||||  | ||||||||||||||| |||||    
T  40946764 gaacttctacggtacactcataaagtgggttgtaccggtactattacttcataattttataaattaa 40946830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 4297892 - 4297965
Alignment:
Q  186 attaagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||| ||||| || ||||||||||||||||  |||||| ||||||||||| ||| || |||||||||| |||||    
T  4297892 attaggggaatttctacggtacactcacaagatgaggtataccggtactcttgcgtcttaattttataaattaa 4297965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 34188941 - 34188888
Alignment:
Q  191 gggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttca 243  Q
    |||||||| |||||||||| | ||||| ||||||||||||||||||||||||||    
T  34188941 gggaacttctacggtacaccttacaaattgaggtgtaccggtactcctgcttca 34188888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 4740633 - 4740569
Alignment:
Q  189 aagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||||| ||| ||||||||||||| |||||||||  | |||||||||||| ||||| ||||    
T  4740633 aagggaacttctacagtacactcacaaaatgaggtgtattgatactcctgcttcttaattatata 4740569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 259
Target Start/End: Complemental strand, 11088634 - 11088563
Alignment:
Q  189 aagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||||| |||||||||| ||||||| ||||||||||| |||||| | || ||||| |||||| |||||    
T  11088634 aagggaacttctacggtacacctcacaaattgaggtgtaccagtactcttcctccataaatttataaattaa 11088563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 40810827 - 40810772
Alignment:
Q  189 aagggaacttatacggtacactc-acaaagtgaggtgtaccggtactcctgcttca 243  Q
    |||||||||| ||||||||| |  ||||| ||||||||||||||||||||||||||    
T  40810827 aagggaacttctacggtacattttacaaattgaggtgtaccggtactcctgcttca 40810772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 259
Target Start/End: Original strand, 38617726 - 38617796
Alignment:
Q  189 aagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||||  |||||||||||  ||| |||||||||||||||||| |||||| ||| | |||| |||||    
T  38617726 aagggaacttcaacggtacactcgtaaattgaggtgtaccggtactcttgcttcgtaaatctataaattaa 38617796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 15362469 - 15362522
Alignment:
Q  191 gggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttca 243  Q
    |||||||| |||||||||| | | ||| ||||||||||||||||||||||||||    
T  15362469 gggaacttctacggtacaccttataaattgaggtgtaccggtactcctgcttca 15362522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 259
Target Start/End: Complemental strand, 27401137 - 27401068
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||| || |||||| | ||||| |||||||||| | ||||| | ||||||||||||||| |||||    
T  27401137 agggaacttttatggtacatttacaaaatgaggtgtactgatactctttcttcataattttataaattaa 27401068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 42640850 - 42640919
Alignment:
Q  191 gggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| ||||| |||| ||||||| |||||| ||||||||||| | |||||||| |||||| |||||    
T  42640850 gggaacttctacggcacacctcacaaattgaggtataccggtactcttacttcataaatttataaattaa 42640919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 45690499 - 45690544
Alignment:
Q  191 gggaacttatacggtacac-tcacaaagtgaggtgtaccggtactc 235  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||||    
T  45690499 gggaacttctacggtacacctcacaaattgaggtgtaccggtactc 45690544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 12182968 - 12182920
Alignment:
Q  188 taagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactc 235  Q
    ||||||||||| |||||||||| | ||||| ||||||||||||||||||    
T  12182968 taagggaacttctacggtacacctaacaaaatgaggtgtaccggtactc 12182920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0667 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0667
Description:

Target: scaffold0667; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 239 - 171
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  239 gggaacttctacggtacactcacaaagtgaggtgtaccggtacttctgcttcataattttataaattaa 171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 7e-24; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 29454143 - 29454211
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  29454143 gggaacttctacggtacactcacaaagtaaggtgtaccggtactcctgcttcataattttataaattaa 29454211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 189 - 259
Target Start/End: Original strand, 10706553 - 10706623
Alignment:
Q  189 aagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||    
T  10706553 aagggaacttctacggtacactcacaaagtgaggtgtactggtactcttgcttcataattttataaattaa 10706623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 190 - 259
Target Start/End: Complemental strand, 1043467 - 1043398
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||| ||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||    
T  1043467 agggaacttctacggtacactcacaaagtgaggtgcactggtattcctgcttcataattttatatattaa 1043398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 2261420 - 2261352
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  2261420 gggaacttctatggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttgtaaattaa 2261352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 39300086 - 39300151
Alignment:
Q  194 aacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||    
T  39300086 aacttttacggtacactcacaaaatgaggtgtaccggtactcttgcttcataattttataaattaa 39300151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 29265589 - 29265657
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| ||| |||||||||||||||||||||||||||||||| || |||||||||||||| |||||    
T  29265589 gggaacttctactgtacactcacaaagtgaggtgtaccggtactcttgtttcataattttataaattaa 29265657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 40776649 - 40776705
Alignment:
Q  203 ggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||    
T  40776649 ggtacactcacaaagtgagatgtaccgatactcctgcttcataattttataaattaa 40776705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 44000557 - 44000629
Alignment:
Q  187 ttaagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| ||| ||||||||||||||||| ||||||||| |||||||| | ||||||||||||||| |||||    
T  44000557 ttaagggatcttctacggtacactcacaaaatgaggtgtatcggtactctttcttcataattttataaattaa 44000629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 34165910 - 34165971
Alignment:
Q  192 ggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||||| ||| ||||||| ||||||||||||||| |||||||| |||||||||||||||||    
T  34165910 ggaacttctaccgtacacttacaaagtgaggtgtatcggtactcttgcttcataattttata 34165971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 118214 - 118154
Alignment:
Q  193 gaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||| || |||||||||||||| ||||||||||||||||||||||||| ||||| ||||    
T  118214 gaacttctatggtacactcacaaaatgaggtgtaccggtactcctgcttcttaattctata 118154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 7128088 - 7128152
Alignment:
Q  189 aagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||||| || |||||||||||||| |||||||||||| |||||||||||| ||||| ||||    
T  7128088 aagggaacttctatggtacactcacaaaatgaggtgtaccgatactcctgcttcttaattctata 7128152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 192 - 259
Target Start/End: Original strand, 38329452 - 38329519
Alignment:
Q  192 ggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||| |||||||||||||||||||||| | |||||||||||  |||| ||||||||||| |||||    
T  38329452 ggaacttctacggtacactcacaaagtgagatataccggtactctcgctttataattttataaattaa 38329519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 37675946 - 37675999
Alignment:
Q  200 tacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||||||||||||||| |||||||||||||||||||| |||| ||||| ||||    
T  37675946 tacggtacactcacaaaatgaggtgtaccggtactcctacttcttaattatata 37675999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 2749315 - 2749383
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| ||||||| ||||||||| |||||||||||||||||| |  | |||||||||||| |||||    
T  2749315 gggaacttctacggtaaactcacaaaatgaggtgtaccggtactctttttgcataattttataaattaa 2749383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 205 - 253
Target Start/End: Original strand, 26521980 - 26522028
Alignment:
Q  205 tacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||||||| ||||||||||| ||||||||||||| ||||||||||    
T  26521980 tacactcacaaaatgaggtgtaccagtactcctgcttcttaattttata 26522028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 41720657 - 41720593
Alignment:
Q  189 aagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||||| ||||||||||||||||| |||||| |||||||||| || |||  ||||||||||    
T  41720657 aagggaacttctacggtacactcacaaaatgaggtataccggtacttctactttttaattttata 41720593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 259
Target Start/End: Original strand, 26988388 - 26988455
Alignment:
Q  192 ggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||| ||||||||||||||||  ||||||||||| |||||| ||| || |||||||||| |||||    
T  26988388 ggaacttttacggtacactcacaagatgaggtgtacctgtactcttgcatcttaattttataaattaa 26988455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 34634262 - 34634192
Alignment:
Q  188 taagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||||| ||||||||||| ||||| |||| ||||||||||||| |  |||||||||||||| |||||    
T  34634262 taagggaacttctacggtacact-acaaaatgagatgtaccggtactcttttttcataattttataaattaa 34634192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 38210727 - 38210664
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||||||| ||||||||||||  ||| | |||||||||| |||||||||||| ||||||||||    
T  38210727 agggaacttctacggtacactcgtaaaataaggtgtaccgatactcctgcttcttaattttata 38210664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 40579103 - 40579040
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||||||| | ||||||||||||||| ||| ||||| ||||||| ||||||| ||||||||||    
T  40579103 agggaacttctgcggtacactcacaaaatgaagtgtatcggtacttctgcttcttaattttata 40579040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 259
Target Start/End: Complemental strand, 9497943 - 9497877
Alignment:
Q  193 gaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||| ||||||||||||||||  ||||||||| |||||||| ||| || |||||||||| |||||    
T  9497943 gaacttctacggtacactcacaagatgaggtgtatcggtactcttgcatcttaattttataaattaa 9497877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 259
Target Start/End: Complemental strand, 17792612 - 17792542
Alignment:
Q  189 aagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||||| || |||||||||| ||| | ||||||| ||||||||||||||| ||| |||||| |||||    
T  17792612 aagggaacttctatggtacactcataaattaaggtgtatcggtactcctgcttcctaaatttatacattaa 17792542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 15231395 - 15231350
Alignment:
Q  189 aagggaacttatacggtacactcacaaagtgaggtgtaccggtact 234  Q
    |||| ||||| ||||||||||||| |||||||||||||||||||||    
T  15231395 aaggaaacttctacggtacactcataaagtgaggtgtaccggtact 15231350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 6631516 - 6631464
Alignment:
Q  194 aacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataa 246  Q
    ||||||||||||||||||  ||| ||||||||| |||||||| ||||||||||    
T  6631516 aacttatacggtacactcgtaaattgaggtgtatcggtactcttgcttcataa 6631464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 15451421 - 15451489
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| || | |||||||||||  |||||||||||||||||| ||| || |||||||||| |||||    
T  15451421 gggaacttctatgttacactcacaagatgaggtgtaccggtactcttgcatcttaattttataaattaa 15451489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 246
Target Start/End: Original strand, 36672005 - 36672065
Alignment:
Q  186 attaagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataa 246  Q
    |||| |||||||| || |||||||||  ||| |||||||||||||||||| ||||||||||    
T  36672005 attatgggaacttctatggtacactcgtaaattgaggtgtaccggtactcttgcttcataa 36672065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 243
Target Start/End: Original strand, 38764735 - 38764791
Alignment:
Q  188 taagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttca 243  Q
    ||||||||||| |||||||||| | ||||| ||||||||| ||||||||||||||||    
T  38764735 taagggaacttctacggtacaccttacaaattgaggtgtatcggtactcctgcttca 38764791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 39646639 - 39646699
Alignment:
Q  193 gaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||| ||||||||||| | ||| | |||||||||||||||||| |||| ||||||||||    
T  39646639 gaacttctacggtacacttataaaataaggtgtaccggtactcctacttcttaattttata 39646699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 253
Target Start/End: Complemental strand, 5329004 - 5328945
Alignment:
Q  194 aacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||| ||||||||| | | ||| |||||||| |||||||||||||||| ||||||||||    
T  5329004 aacttctacggtacatttataaaatgaggtgtcccggtactcctgcttcttaattttata 5328945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 12632902 - 12632952
Alignment:
Q  189 aagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctg 238  Q
    |||||||||| |||||||||| ||||||| |||||||||||| ||||||||    
T  12632902 aagggaacttctacggtacacctcacaaattgaggtgtaccgatactcctg 12632952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 27847879 - 27847813
Alignment:
Q  187 ttaagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||||||| || || ||||| |||||||| ||||||||||| ||||| ||| ||| ||||||||||    
T  27847879 ttaagggaatttctagggtacgctcacaaaatgaggtgtaccagtacttctgtttcttaattttata 27847813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 32887665 - 32887723
Alignment:
Q  190 agggaacttatacggtaca-ctcacaaagtgaggtgtaccggtactcc-tgcttcataa 246  Q
    ||||||||| ||||||||| |||| ||| ||||||||||||||||||| ||||||||||    
T  32887665 agggaacttctacggtacatctcataaattgaggtgtaccggtactccttgcttcataa 32887723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 23870266 - 23870315
Alignment:
Q  189 aagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcct 237  Q
    |||||||||| |||||||||| ||||||| || |||||||||||||||||    
T  23870266 aagggaacttctacggtacacctcacaaattggggtgtaccggtactcct 23870315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 259
Target Start/End: Complemental strand, 31158961 - 31158892
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||| |||||||||||| |||| ||||||||| | |||||| |||||| ||| | |||| |||||    
T  31158961 agggaacttctacggtacactcgcaaattgaggtgtatcagtactcttgcttcctaaatctataaattaa 31158892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 43841846 - 43841911
Alignment:
Q  194 aacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||| ||||||||||||| ||| | |||||||  ||||||| | ||||||||||||||| |||||    
T  43841846 aacttctacggtacactcataaaataaggtgtattggtactctttcttcataattttataaattaa 43841911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 45210634 - 45210569
Alignment:
Q  194 aacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||| ||||  | |||||||||||||||||| ||||  || |||||||||||||| |||||    
T  45210634 aacttatactgtactattacaaagtgaggtgtaccgatactattgtttcataattttataaattaa 45210569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 17642479 - 17642411
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| |||||||||| | |||| | |||||||||||||||| | ||||| || |||||| |||||    
T  17642479 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaa 17642411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 253
Target Start/End: Complemental strand, 24377694 - 24377646
Alignment:
Q  205 tacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||  ||| |||||||||||||||||| |||||||||| ||||||    
T  24377694 tacactcgtaaattgaggtgtaccggtactcttgcttcataaatttata 24377646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 252
Target Start/End: Original strand, 30777274 - 30777334
Alignment:
Q  193 gaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttat 252  Q
    |||||| |||||||||| ||| ||| |||||||||||| ||||||||||| |||| |||||    
T  30777274 gaacttctacggtacacctcataaattgaggtgtaccgatactcctgctttataaatttat 30777334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 3e-23; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 192 - 259
Target Start/End: Original strand, 39816506 - 39816573
Alignment:
Q  192 ggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  39816506 ggaacttctacggtacactcacaaagtgaggtgtaccggtactcttgcttcataattttataaattaa 39816573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 13119202 - 13119137
Alignment:
Q  194 aacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  13119202 aacttctacggtacacttacaaagtgaggtgtaccggtactcctgcttcataattttataaattaa 13119137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 36427902 - 36427973
Alignment:
Q  188 taagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||||  ||||||||||| |||||    
T  36427902 taagggaacttctacggtacactcacaaagtgaggtgtaccggtactcttgctcaataattttataaattaa 36427973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 42486602 - 42486673
Alignment:
Q  188 taagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| || |||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||    
T  42486602 taagggaatttctacggtacactcacaaagtgaggtgtaccggtactcatacttcataattttataaattaa 42486673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 702355 - 702294
Alignment:
Q  192 ggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  702355 ggaacttctacggtacactcacaaaatgaggtgtaccggtactcttgcttcataattttata 702294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 29960276 - 29960205
Alignment:
Q  188 taagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||||| ||||||||||||| ||| |||||||||||||||||| | ||||||||||||||| |||||    
T  29960276 taagggaacttttacggtacactcataaaatgaggtgtaccggtactctttcttcataattttataaattaa 29960205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 2852108 - 2852042
Alignment:
Q  187 ttaagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||||||| ||||||||||||||||| ||||||||| |||||||| |||||| ||||||||||    
T  2852108 ttaagggaacttctacggtacactcacaaaatgaggtgtatcggtactcatgcttcttaattttata 2852042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 34259943 - 34259878
Alignment:
Q  194 aacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||| ||||||| ||| |||||||||||| ||||||||||||||||||||||||||||| |||||    
T  34259943 aacttctacggtatactaacaaagtgaggtctaccggtactcctgcttcataattttataaattaa 34259878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 13127387 - 13127319
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| ||||||||| ||||||| |||||||||||||||||| | ||||||||||||||| |||||    
T  13127387 gggaacttctacggtacattcacaaaatgaggtgtaccggtactctttcttcataattttataaattaa 13127319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 204 - 259
Target Start/End: Complemental strand, 5360119 - 5360064
Alignment:
Q  204 gtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||    
T  5360119 gtacactcacaaaatgaggtgtatcggtactcctgcttcataattttataaattaa 5360064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 6260425 - 6260362
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||||||| ||||||||||||| ||| |||||||||||||||||| | |||||||||||||||    
T  6260425 agggaacttctacggtacactcataaaatgaggtgtaccggtactcttccttcataattttata 6260362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 192 - 259
Target Start/End: Original strand, 40563116 - 40563183
Alignment:
Q  192 ggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||| ||||||||||||| ||| |||||||||||| ||||| ||||||||||||||||| |||||    
T  40563116 ggaacttctacggtacactcataaaatgaggtgtaccgatactcttgcttcataattttataaattaa 40563183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 253
Target Start/End: Complemental strand, 40803724 - 40803665
Alignment:
Q  194 aacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||| |||||| |||||||||| ||||||||||||||||||||||||| ||||||||||    
T  40803724 aacttctacggtgcactcacaaaatgaggtgtaccggtactcctgcttcttaattttata 40803665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 479676 - 479734
Alignment:
Q  193 gaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataatttta 251  Q
    |||||| |||||||||||||||||||||||||||| |||||||  ||||||||||||||    
T  479676 gaacttctacggtacactcacaaagtgaggtgtactggtactctcgcttcataatttta 479734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 253
Target Start/End: Complemental strand, 33678564 - 33678502
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||| || |||||||||||||| ||||||||| ||||||||||||||| ||||||||||    
T  33678564 gggaacttctatggtacactcacaaaatgaggtgtatcggtactcctgcttcttaattttata 33678502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 33210773 - 33210708
Alignment:
Q  194 aacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||| ||||||||||||||||| |||||||||||||||| | | ||||||||||||||| |||||    
T  33210773 aacttctacggtacactcacaaaatgaggtgtaccggtaccctttcttcataattttataaattaa 33210708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 9604433 - 9604493
Alignment:
Q  193 gaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||| ||||||||||||||||| |||||||||||||||||||| |||| ||||| ||||    
T  9604433 gaacttctacggtacactcacaaaatgaggtgtaccggtactcctacttcttaattatata 9604493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 188 - 243
Target Start/End: Original strand, 39939030 - 39939086
Alignment:
Q  188 taagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttca 243  Q
    ||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  39939030 taagggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgcttca 39939086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 204 - 259
Target Start/End: Complemental strand, 3426183 - 3426128
Alignment:
Q  204 gtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||||||| |||||||||||| ||||| ||||||||||||||||| |||||    
T  3426183 gtacactcacaaaatgaggtgtaccgatactcttgcttcataattttataaattaa 3426128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 189 - 259
Target Start/End: Complemental strand, 39979752 - 39979681
Alignment:
Q  189 aagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||||| |||||||||| ||||||| |||||||||||| |||| ||||||||||| |||||| |||||    
T  39979752 aagggaacttctacggtacacctcacaaattgaggtgtaccgatacttctgcttcataaatttataaattaa 39979681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 14434818 - 14434880
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||| ||| ||||||||||||| ||||||||| ||||||||||| ||| ||||||||||    
T  14434818 gggaacttctactgtacactcacaaaatgaggtgtatcggtactcctgtttcttaattttata 14434880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 9913198 - 9913251
Alignment:
Q  200 tacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||    
T  9913198 tacgatacactcataaaatgaggtgtaccggtactcctgcttcttaattttata 9913251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 28318348 - 28318409
Alignment:
Q  192 ggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||||| ||||||||||| | ||| ||||||||| ||||||||||||||| ||||||||||    
T  28318348 ggaacttctacggtacacttataaaatgaggtgtatcggtactcctgcttcttaattttata 28318409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 30753458 - 30753515
Alignment:
Q  202 cggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||||||||| |||||||||||||||||| | ||| ||||||||||| |||||    
T  30753458 cggtacactcacaaaatgaggtgtaccggtactcttactttataattttataaattaa 30753515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 4617105 - 4617045
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataatttta 251  Q
    |||||||| |||||||||||||||||||||| ||||||| |||||  ||||||| ||||||    
T  4617105 gggaacttttacggtacactcacaaagtgagatgtaccgatactctcgcttcatgatttta 4617045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 17069391 - 17069336
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataa 246  Q
    |||||||| |||||| |||||  ||| |||||||||||||||||||||||||||||    
T  17069391 gggaacttctacggtgcactcgtaaattgaggtgtaccggtactcctgcttcataa 17069336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 259
Target Start/End: Complemental strand, 29744307 - 29744240
Alignment:
Q  192 ggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||||||||||||||||||| | | |||||||||||||  ||||||| || |||||| |||||    
T  29744307 ggaacttatacggtacactcacaaattaaagtgtaccggtacttttgcttcaaaaatttataaattaa 29744240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 203 - 253
Target Start/End: Original strand, 35370410 - 35370460
Alignment:
Q  203 ggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||| ||||||||| |||||||||||||||||| |||||| ||||||||||    
T  35370410 ggtaaactcacaaaatgaggtgtaccggtactcttgcttcttaattttata 35370460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 40756540 - 40756594
Alignment:
Q  190 agggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttca 243  Q
    ||||||||| |||||||||| ||||||| ||||||||| ||||||||||||||||    
T  40756540 agggaacttctacggtacacctcacaaattgaggtgtatcggtactcctgcttca 40756594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 42597474 - 42597535
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||| ||||||||||||||||| |||||||||| | |||| ||||||| ||||||||||    
T  42597474 gggaacttctacggtacactcacaaaatgaggtgtactgatact-ctgcttcttaattttata 42597535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 4039469 - 4039538
Alignment:
Q  191 gggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| |||||||||| ||||||| | |||||||||||||||| | |||||||| |||||| |||||    
T  4039469 gggaacttctacggtacacctcacaaattaaggtgtaccggtactcttacttcataaatttataaattaa 4039538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 5512682 - 5512739
Alignment:
Q  191 gggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcc-tgcttcataa 246  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||||| ||||||||||    
T  5512682 gggaacttctacggtacacctcacaaattgaggtgtaccggtactccttgcttcataa 5512739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 31588641 - 31588572
Alignment:
Q  191 gggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| |||||||||| ||||||| |||||||||||||||||  || ||||||| |||||| |||||    
T  31588641 gggaacttctacggtacacctcacaaattgaggtgtaccggtacttttgtttcataaatttataaattaa 31588572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 2011052 - 2011123
Alignment:
Q  188 taagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||| ||| |||||||||| ||||||| |||||||||||| |||| ||||||||||| |||||| |||||    
T  2011052 taagggagcttttacggtacacctcacaaattgaggtgtaccgatact-ctgcttcataaatttataaattaa 2011123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 241
Target Start/End: Original strand, 5204616 - 5204668
Alignment:
Q  190 agggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgctt 241  Q
    ||||||||| |||||||||| ||||||| ||||||||| ||||||||||||||    
T  5204616 agggaacttctacggtacacctcacaaattgaggtgtatcggtactcctgctt 5204668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 246
Target Start/End: Original strand, 16432654 - 16432714
Alignment:
Q  187 ttaagggaacttatacggtacact-cacaaagtgaggtgtaccggtactcctgcttcataa 246  Q
    |||||||||||| ||||||||||| || ||| ||||||||||||| |||||||||| ||||    
T  16432654 ttaagggaacttttacggtacacttcataaattgaggtgtaccggaactcctgctttataa 16432714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 27980180 - 27980112
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| ||||||| ||  |||||||||| |||| |||||||| || |||||||||||||| |||||    
T  27980180 gggaacttctacggtaaacctacaaagtgagatgtagcggtactcttgtttcataattttataaattaa 27980112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 251
Target Start/End: Complemental strand, 38294005 - 38293966
Alignment:
Q  212 acaaagtgaggtgtaccggtactcctgcttcataatttta 251  Q
    ||||||||||||||||||||||||  ||||||||||||||    
T  38294005 acaaagtgaggtgtaccggtactctcgcttcataatttta 38293966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 33958100 - 33958146
Alignment:
Q  1 tcttttggataaaatacaagtttgaacggcctctttggcgtttaaaa 47  Q
    ||||||||||||||| |||||||||||||||||| ||| ||| ||||    
T  33958100 tcttttggataaaatgcaagtttgaacggcctctctggtgttcaaaa 33958146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 4367196 - 4367131
Alignment:
Q  190 agggaacttatacggtacac-tcacaaa-gtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||||||| |||||||||| ||||||| |||||||||| ||||||||||| |||| || ||||||    
T  4367196 agggaacttctacggtacacctcacaaaagtgaggtgtatcggtactcctggttcaaaaatttata 4367131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 238
Target Start/End: Original strand, 5140672 - 5140717
Alignment:
Q  194 aacttatacggtacac-tcacaaagtgaggtgtaccggtactcctg 238  Q
    ||||| |||||||||| ||||||| |||||||||||||||||||||    
T  5140672 aacttctacggtacacctcacaaattgaggtgtaccggtactcctg 5140717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 7080519 - 7080470
Alignment:
Q  189 aagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcct 237  Q
    |||||||||| |||||||||| ||||||| || |||||||||||||||||    
T  7080519 aagggaacttctacggtacacctcacaaattggggtgtaccggtactcct 7080470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 9499811 - 9499740
Alignment:
Q  188 taagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||| ||| |||||||||| ||| ||| |||||||||||| ||||| |||||||||| |||||| |||||    
T  9499811 taagggagcttctacggtacacctcataaattgaggtgtaccgatactc-tgcttcataaatttataaattaa 9499740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 9910037 - 9910085
Alignment:
Q  189 aagggaacttatacggtacactcacaaagtgaggtgtaccggtactcct 237  Q
    |||| ||||| || |||||||||||||| |||||||||||| |||||||    
T  9910037 aaggaaacttctatggtacactcacaaaatgaggtgtaccgatactcct 9910085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 259
Target Start/End: Complemental strand, 12336612 - 12336553
Alignment:
Q  200 tacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||||| ||||||| |||||||||||| |||| ||||||||||| |||||| |||||    
T  12336612 tacggtacacctcacaaattgaggtgtaccgatact-ctgcttcataaatttataaattaa 12336553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 28332530 - 28332482
Alignment:
Q  189 aagggaacttatacggtacactcacaaagtgaggtgtaccggtactcct 237  Q
    |||||||||| |||||||||||  |||| | ||||||||||||||||||    
T  28332530 aagggaacttctacggtacacttgcaaattaaggtgtaccggtactcct 28332482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 29996905 - 29996833
Alignment:
Q  188 taagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||||| |||||||||| ||||||| | |||| ||||||||||| ||||  |||| |||||| |||||    
T  29996905 taagggaacttctacggtacacatcacaaattaaggtttaccggtactcttgctctataaatttataaattaa 29996833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 191 - 253
Target Start/End: Complemental strand, 1857210 - 1857148
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  1857210 gggaacttctacggtacactcacaaaatgaggtgtaccggtactcctgcttcttaattttata 1857148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 5340363 - 5340307
Alignment:
Q  203 ggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  5340363 ggtacactcacaaagtaaggtgtaccggtactcctgcttcataattttataaattaa 5340307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 259
Target Start/End: Original strand, 5970700 - 5970767
Alignment:
Q  192 ggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| |||||    
T  5970700 ggaacttctacggtacactcacatagtgagatgtaccggtactcttgcttcataattttataaattaa 5970767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 191 - 253
Target Start/End: Complemental strand, 4720877 - 4720815
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||||||||||||||||| ||| ||||||||| ||||||||||||||| ||||||||||    
T  4720877 gggaacttatacggtacactcataaaatgaggtgtatcggtactcctgcttcttaattttata 4720815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 27761399 - 27761461
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttat 252  Q
    |||||| || ||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  27761399 agggaatttctacggtacactcacaaagtgaggtgtatcggtactcttgcttcataattttat 27761461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 27990536 - 27990598
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||| |||| |||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  27990536 gggaacttctacgatacactcacaaaatgaggtgtaccggtactcctgcttcttaattttata 27990598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 193 - 259
Target Start/End: Complemental strand, 56303242 - 56303176
Alignment:
Q  193 gaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||| || |||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||    
T  56303242 gaacttctatggtacactcataaagtgaggtgtaccggtactcctgctttataattttataaattaa 56303176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 352485 - 352542
Alignment:
Q  202 cggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||    
T  352485 cggtacactcacaaagtgaggtgtaccgatactcctgtttcataattttataaattaa 352542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 24535491 - 24535544
Alignment:
Q  200 tacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  24535491 tacggtacactcacaaaatgaggtgtaccggtactcctgcttcttaattttata 24535544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 33491162 - 33491219
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataatt 248  Q
    |||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  33491162 gggaacttctacggtacattcacaaagtgagatgtaccggtactcctgcttcataatt 33491219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 42177342 - 42177410
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| ||||||||||||||||| ||||||||| |||||||| | ||||||||||||||| |||||    
T  42177342 gggaacttctacggtacactcacaaaatgaggtgtatcggtactctttcttcataattttataaattaa 42177410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 28835787 - 28835850
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||||||| ||||||||||||||||| ||||||| || |||||||||||||| ||||||||||    
T  28835787 agggaacttttacggtacactcacaaaatgaggtgaactggtactcctgcttcttaattttata 28835850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 253
Target Start/End: Complemental strand, 31999128 - 31999069
Alignment:
Q  194 aacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||| ||||||||||||| ||||||||||||| |||||||| |||||||||||||||||    
T  31999128 aacttctacggtacactcataaagtgaggtgtatcggtactcttgcttcataattttata 31999069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 253
Target Start/End: Complemental strand, 126984 - 126922
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||| ||||||||||||| ||| ||||||||| ||||||||||||||| ||||||||||    
T  126984 gggaacttctacggtacactcataaaatgaggtgtatcggtactcctgcttcttaattttata 126922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 253
Target Start/End: Complemental strand, 29582372 - 29582310
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||| ||||||||||||||||| |||||||||||||||||  | |||||||||||||||    
T  29582372 gggaacttctacggtacactcacaaattgaggtgtaccggtacttttccttcataattttata 29582310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 259
Target Start/End: Original strand, 30348162 - 30348231
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||  ||||||||| ||||||| |||||||||||||||||| | ||||||||||||||| |||||    
T  30348162 agggaactactacggtacaatcacaaaatgaggtgtaccggtactctttcttcataattttataaattaa 30348231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 23058765 - 23058825
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataatttta 251  Q
    |||||||| |||||||||||||||||||||| |||||||||||||  |||||||| |||||    
T  23058765 gggaacttctacggtacactcacaaagtgagatgtaccggtactctcgcttcatactttta 23058825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 26118161 - 26118097
Alignment:
Q  189 aagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||||| ||||||||||||||||  |||||||||||||||||| ||| || ||||||||||    
T  26118161 aagggaacttctacggtacactcacaagatgaggtgtaccggtactcttgcatcttaattttata 26118097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 29364587 - 29364527
Alignment:
Q  192 ggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttat 252  Q
    ||||||| ||| ||||||||||||| ||||||||||||||||||||||||  |||||||||    
T  29364587 ggaacttctactgtacactcacaaaatgaggtgtaccggtactcctgctttttaattttat 29364527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 194 - 253
Target Start/End: Complemental strand, 8256845 - 8256786
Alignment:
Q  194 aacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||| ||||||||||||||||| ||||||||| |||||||||| |||| ||||||||||    
T  8256845 aacttttacggtacactcacaaaatgaggtgtatcggtactcctccttcttaattttata 8256786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 194 - 253
Target Start/End: Complemental strand, 8270263 - 8270204
Alignment:
Q  194 aacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||| ||||||||||||||||| ||||||||| |||||||||| |||| ||||||||||    
T  8270263 aacttttacggtacactcacaaaatgaggtgtatcggtactcctccttcttaattttata 8270204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 259
Target Start/End: Complemental strand, 50608089 - 50608023
Alignment:
Q  193 gaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||| ||||||||||||||||| |||||||||||  ||||| | ||||||||||||||| |||||    
T  50608089 gaacttctacggtacactcacaaaatgaggtgtaccaatactctttcttcataattttataaattaa 50608023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 19527130 - 19527077
Alignment:
Q  191 gggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttca 243  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  19527130 gggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgcttca 19527077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 32288898 - 32288971
Alignment:
Q  186 attaagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||| ||||| || ||||||| | ||| |||||||||| || ||||||| ||||||||||||||||||||||||    
T  32288898 attatgggaatttctacggtatattcataaagtgaggtatatcggtacttctgcttcataattttatatattaa 32288971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 32570774 - 32570705
Alignment:
Q  191 gggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| |||||||||| ||||||| |||||||||||||||||| | |||||||| |||||| |||||    
T  32570774 gggaacttctacggtacacctcacaaattgaggtgtaccggtactcttacttcataaatttataaattaa 32570705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 34829129 - 34829061
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||| || ||||||||||||||||  |||||||||||||||||| ||| || |||||||||| |||||    
T  34829129 gggaatttctacggtacactcacaagatgaggtgtaccggtactcttgcatcttaattttataaattaa 34829061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 38008560 - 38008492
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| |||||| |||||||||| ||||||||| || ||||| | ||||||||||||||| |||||    
T  38008560 gggaacttctacggtgcactcacaaaatgaggtgtatcgatactctttcttcataattttataaattaa 38008492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 46663732 - 46663664
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| ||||||||||||  ||| |||||||||||||||||| |||||||||| | |||| |||||    
T  46663732 gggaacttctacggtacactcgtaaattgaggtgtaccggtactcttgcttcataaatctataaattaa 46663664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 39103539 - 39103590
Alignment:
Q  193 gaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttca 243  Q
    |||||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  39103539 gaacttctacggtacacctcacaaattgaggtgtaccggtactcctgcttca 39103590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 259
Target Start/End: Complemental strand, 54996496 - 54996441
Alignment:
Q  204 gtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||| ||| ||||||||||||| ||||||||||| |||||||||||||| |||||    
T  54996496 gtacattcataaagtgaggtgtaacggtactcctgtttcataattttataaattaa 54996441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 259
Target Start/End: Original strand, 24979944 - 24980009
Alignment:
Q  193 gaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||| ||||||||||||||||| | |||||||||||||||  |||||||| |||||||| |||||    
T  24979944 gaacttctacggtacactcacaaaataaggtgtaccggtactattgcttcat-attttataaattaa 24980009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 34584179 - 34584245
Alignment:
Q  188 taagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||||||||| |||||||||| ||||||| |||||||||||| |||||| |||||| || ||||||    
T  34584179 taagggaacttctacggtacacctcacaaattgaggtgtaccgatactccagcttcaaaaatttata 34584245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 259
Target Start/End: Original strand, 56104416 - 56104470
Alignment:
Q  205 tacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||||||||||||||||||| |||||  | |||||||||||||| |||||    
T  56104416 tacactcacaaagtgaggtgtaccgatactctcgtttcataattttataaattaa 56104470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 49286680 - 49286741
Alignment:
Q  183 actattaagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttca 243  Q
    |||||| ||||| ||| |||||||||| ||||||| |||||||||||||||||||| |||||    
T  49286680 actatttagggagcttctacggtacacctcacaaattgaggtgtaccggtactcctacttca 49286741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 52607571 - 52607636
Alignment:
Q  194 aacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||| ||||||||| ||||||  |||||||||||||||||| ||| || |||||||||| |||||    
T  52607571 aacttctacggtacattcacaagatgaggtgtaccggtactcttgcatcttaattttataaattaa 52607636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 408466 - 408414
Alignment:
Q  194 aacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataa 246  Q
    ||||| ||||||||||||  ||| |||||||||||||||||| ||||||||||    
T  408466 aacttctacggtacactcgtaaattgaggtgtaccggtactcttgcttcataa 408414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 3763519 - 3763451
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| ||| ||||||||||||| | ||||||| |||||||  | ||||||||||||||| |||||    
T  3763519 gggaacttctaccgtacactcacaaaataaggtgtatcggtactttttcttcataattttataaattaa 3763451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 9356381 - 9356449
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| ||||||| ||||||||| |||| ||||   ||||| |||||||||||||||||| |||||    
T  9356381 gggaacttctacggtatactcacaaaatgagatgtattagtacttctgcttcataattttataaattaa 9356449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 243
Target Start/End: Complemental strand, 12756408 - 12756356
Alignment:
Q  192 ggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttca 243  Q
    ||||||| |||||||||| ||||||| ||||||||||||||| ||||||||||    
T  12756408 ggaacttctacggtacacctcacaaattgaggtgtaccggtattcctgcttca 12756356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 246
Target Start/End: Original strand, 22789579 - 22789639
Alignment:
Q  188 taagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcc-tgcttcataa 246  Q
    ||||||||||| |||||||||| ||||||| || |||||||||||||||| ||||||||||    
T  22789579 taagggaacttctacggtacacctcacaaattggggtgtaccggtactccttgcttcataa 22789639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 30060529 - 30060585
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataa 246  Q
    ||||||||| ||||||||||||  ||| |||||||||||| ||||| ||||||||||    
T  30060529 agggaacttctacggtacactcgtaaattgaggtgtaccgatactcttgcttcataa 30060585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 36631036 - 36631103
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| ||||||||||||||||| ||||||||| |||||||  |  |||||||||||||| |||||    
T  36631036 gggaacttctacggtacactcacaaaatgaggtgtaacggtact-atttttcataattttataaattaa 36631103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 243
Target Start/End: Original strand, 53973465 - 53973509
Alignment:
Q  200 tacggtacac-tcacaaagtgaggtgtaccggtactcctgcttca 243  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||    
T  53973465 tacggtacacctcacaaattgaggtgtaccggtactcctgcttca 53973509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 595296 - 595359
Alignment:
Q  191 gggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||| || |||||||||| ||||||| |||||||||||||||||||| ||||| || ||||||    
T  595296 gggaatttctacggtacacctcacaaattgaggtgtaccggtactcctacttcaaaaatttata 595359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 22077776 - 22077709
Alignment:
Q  187 ttaagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||||||| |||||||||| |||    ||||||||||||||||||||||||||| || ||||||    
T  22077776 ttaagggaacttctacggtacacctcattttgtgaggtgtaccggtactcctgcttcaaaaatttata 22077709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 27950256 - 27950303
Alignment:
Q  189 aagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactc 235  Q
    |||||||||| |||||||||| ||||||| ||||||||||||||||||    
T  27950256 aagggaacttctacggtacacctcacaaattgaggtgtaccggtactc 27950303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 259
Target Start/End: Complemental strand, 48207486 - 48207416
Alignment:
Q  189 aagggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||| ||| |||||||||| ||||||| |||||||||||| |||| ||||||||||| |||||| |||||    
T  48207486 aagggagcttctacggtacacctcacaaattgaggtgtaccgatact-ctgcttcataaatttataaattaa 48207416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 50498143 - 50498206
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||||||| ||| |||| |||||||| |||||| ||||||||||| | ||| |||||||||||    
T  50498143 agggaacttctactgtactctcacaaattgaggtttaccggtactcttactttataattttata 50498206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 52323966 - 52324029
Alignment:
Q  191 gggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||| | |||||||| ||||||| |||||||||||| |||||||||| ||||| ||||||    
T  52323966 gggaacttctgcggtacacctcacaaattgaggtgtaccgatactcctgctacataaatttata 52324029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 259
Target Start/End: Original strand, 53936508 - 53936575
Alignment:
Q  192 ggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||| ||||||||||||| ||  ||||||||| |||||||| ||| || |||||||||| |||||    
T  53936508 ggaacttctacggtacactcataagatgaggtgtatcggtactcttgcatcttaattttataaattaa 53936575  T

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Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 4491263 - 4491209
Alignment:
Q  190 agggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttca 243  Q
    ||||||||| |||||||||| ||| ||| ||||||||||||||||||||| ||||    
T  4491263 agggaacttctacggtacacctcataaattgaggtgtaccggtactcctggttca 4491209  T

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Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 45692622 - 45692684
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||| ||||||||||||  ||| | |||||||||| ||||| |||||| ||||||||||    
T  45692622 gggaacttctacggtacactcgtaaaataaggtgtaccgatactcttgcttcttaattttata 45692684  T

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Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 259
Target Start/End: Complemental strand, 54178827 - 54178758
Alignment:
Q  190 agggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||| ||| |||||||||| ||||||| |||||||||||| |||| ||||||||||| |||||| |||||    
T  54178827 agggagcttctacggtacacctcacaaattgaggtgtaccgatact-ctgcttcataaatttataaattaa 54178758  T

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Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 25607694 - 25607759
Alignment:
Q  195 acttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||| |||||||||| ||||||| ||||||||||||||||||   |||||||| |||||| |||||    
T  25607694 acttctacggtacacctcacaaattgaggtgtaccggtactctcacttcataaatttataaattaa 25607759  T

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Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 31296530 - 31296583
Alignment:
Q  191 gggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttca 243  Q
    |||||||| ||||| |||| ||||||| |||||||||||||||||| |||||||    
T  31296530 gggaacttttacgggacacctcacaaattgaggtgtaccggtactcatgcttca 31296583  T

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Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 252
Target Start/End: Original strand, 1433804 - 1433868
Alignment:
Q  188 taagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttat 252  Q
    |||| |||||| || |||||||||| ||| | ||||||||||||| ||||||||| ||| |||||    
T  1433804 taagagaacttctatggtacactcataaattaaggtgtaccggtattcctgcttcctaaatttat 1433868  T

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Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 21424551 - 21424479
Alignment:
Q  188 taagggaacttatacggtaca-ctcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    ||||||||||| ||||||||| || ||||| |||| ||||||||||||| | |||||||| || ||| |||||    
T  21424551 taagggaacttctacggtacatctaacaaaatgagatgtaccggtactcttacttcataaattgataaattaa 21424479  T

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Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 246
Target Start/End: Complemental strand, 21722602 - 21722542
Alignment:
Q  188 taagggaacttatacggtaca-ctcacaaagtgaggtgtaccggtactcc-tgcttcataa 246  Q
    ||||||||||| ||||||||| |||||||| || ||||||||| |||||| ||||||||||    
T  21722602 taagggaacttctacggtacacctcacaaattggggtgtaccgatactccttgcttcataa 21722542  T

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Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 28038091 - 28038047
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactc 235  Q
    |||||||| |||||||||| |||||| | ||||||||||||||||    
T  28038091 gggaacttctacggtacacccacaaattaaggtgtaccggtactc 28038047  T

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Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 243
Target Start/End: Original strand, 43349087 - 43349119
Alignment:
Q  211 cacaaagtgaggtgtaccggtactcctgcttca 243  Q
    |||||| ||||||||||||||||||||||||||    
T  43349087 cacaaattgaggtgtaccggtactcctgcttca 43349119  T

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Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 46215772 - 46215824
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttca 243  Q
    |||||||| |||||||||||| |||| | | |||||||||||||||| |||||    
T  46215772 gggaacttctacggtacactcgcaaattaatgtgtaccggtactcctacttca 46215824  T

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Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 50189420 - 50189364
Alignment:
Q  190 agggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataa 246  Q
    ||||||||| ||| ||||||||  ||| ||||||||||| |||||| ||||||||||    
T  50189420 agggaacttctacagtacactcgtaaattgaggtgtaccagtactcttgcttcataa 50189364  T

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Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 50776178 - 50776110
Alignment:
Q  191 gggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttatatattaa 259  Q
    |||||||| ||||||||||| | ||| ||||||||| |||||||  |  |||||||||||||| |||||    
T  50776178 gggaacttctacggtacacttataaaatgaggtgtatcggtactattttttcataattttataaattaa 50776110  T

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Target: scaffold1319 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1319
Description:

Target: scaffold1319; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 253
Target Start/End: Original strand, 37 - 105
Alignment:
Q  185 tattaagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||| |||||||| ||||||||||||||||| |||||||||  |||||||||||||| ||||||||||    
T  37 tattatgggaacttctacggtacactcacaaaatgaggtgtattggtactcctgcttcttaattttata 105  T

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Target: scaffold0432 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 3027 - 3091
Alignment:
Q  186 attaagggaacttatacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    |||||||||| || ||||||||||||| ||||||||||   ||||||||||| |||||||||||||||    
T  3027 attaagggaatttctacggtacactcataaagtgaggt---ccggtactcctacttcataattttata 3091  T

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Target: scaffold0271 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0271
Description:

Target: scaffold0271; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 17067 - 17005
Alignment:
Q  191 gggaacttatacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttat 252  Q
    |||||||| |||||||||| ||||||| |||||||||||| ||||||| |||||||| |||||    
T  17067 gggaacttctacggtacacctcacaaattgaggtgtaccgatactcctacttcataaatttat 17005  T

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Target: scaffold0625 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 6261 - 6312
Alignment:
Q  186 attaagggaacttatacggtacactcacaaagtgaggtgtaccggtactcct 237  Q
    ||||||||||||| |||||||||| | |||| | ||||||||||||||||||    
T  6261 attaagggaacttctacggtacacccgcaaattaaggtgtaccggtactcct 6312  T

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Target: scaffold0438 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 5379 - 5312
Alignment:
Q  1 tcttttggataaaatacaagtttgaacggcctctttggcgtttaaaaaggagagtgtgtgaaggagaa 68  Q
    ||||||||||||||| || ||||||||||||||| | | ||| |||||||| ||| |||||| |||||    
T  5379 tcttttggataaaatgcatgtttgaacggcctctcttgtgttcaaaaaggacagtatgtgaatgagaa 5312  T

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Target: scaffold0446 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0446
Description:

Target: scaffold0446; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 253
Target Start/End: Original strand, 3884 - 3932
Alignment:
Q  205 tacactcacaaagtgaggtgtaccggtactcctgcttcataattttata 253  Q
    ||||||||| ||||||||||||||| |||||  | ||||||||||||||    
T  3884 tacactcacgaagtgaggtgtaccgatactctcgtttcataattttata 3932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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