View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4334-Insertion-5 (Length: 211)
Name: NF4334-Insertion-5
Description: NF4334
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4334-Insertion-5 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 13348474 - 13348684
Alignment:
| Q |
1 |
aaaaaatatcttgaagaatgaatgaaatattacaaacctgcagcaggggtaatgcaaaccaaaccagtaatcatgccttgaacagcaccaataacagaag |
100 |
Q |
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| T |
13348474 |
aaaaaatatcttgaagaatgaatgaaatattacaaacctgcagcaggggtaatgcaaaccaaaccagtaatcatgccttgaacagcaccaataacagaag |
13348573 |
T |
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| Q |
101 |
gctttctgaagaaaatgacatcaaggaagacccaagtaagcaagctagtagcagtgcaagcatgtgtgttcaagacagccaatgaagcatccaagccaac |
200 |
Q |
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| T |
13348574 |
gctttctgaagaaaatgacatcaaggaagacccaagtaagcaagctagtagcagtgcaagcatgtgtgttcaagacagccaatgaagcatccaagccaac |
13348673 |
T |
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| Q |
201 |
tgagtaaggat |
211 |
Q |
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| T |
13348674 |
tgagtaaggat |
13348684 |
T |
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Target: chr8 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 49 - 125
Target Start/End: Original strand, 39725518 - 39725594
Alignment:
| Q |
49 |
gtaatgcaaaccaaaccagtaatcatgccttgaacagcaccaataacagaaggctttctgaagaaaatgacatcaag |
125 |
Q |
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| T |
39725518 |
gtaatgcaaacaagaccagtaatcatgccttgaacagctccaataactgatggttttttgaagaatatgacatcaag |
39725594 |
T |
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