View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4336-Insertion-107 (Length: 196)
Name: NF4336-Insertion-107
Description: NF4336
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4336-Insertion-107 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 2554440 - 2554634
Alignment:
| Q |
1 |
acgcatacgatgaagtctaaacccataaatctgcctgtgtttgctcacacatgcgagtaatgcctctttgcatatgaaaagaacactatatatacttggt |
100 |
Q |
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|||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2554440 |
acgcatacaatgaagtctaaacccataaatttgcccgtgtttgctcacacatgcgagtaatgcctctttgcatatgaaaagaacactatatatacttggt |
2554539 |
T |
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| Q |
101 |
ttttcctccactcaaaaactctctaaaacattctctcatccccacaatatttcccattgataaatcacttgaaatagagacaaatccacatccaaa |
196 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2554540 |
ttt-cctccactcaaaaactctctaaaacattctctcatccccacactatttcccattgataaatcacttgaaatagagacaaatccacatccaaa |
2554634 |
T |
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