View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4336-Insertion-133 (Length: 47)

Name: NF4336-Insertion-133
Description: NF4336
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4336-Insertion-133
NF4336-Insertion-133
[»] chr1 (1 HSPs)
chr1 (12-47)||(50663977-50664012)


Alignment Details
Target: chr1 (Bit Score: 36; Significance: 0.000000000003; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 47
Target Start/End: Complemental strand, 50664012 - 50663977
Alignment:
12 aaatatagtttcttattattctggcaccctcttttg 47  Q
    ||||||||||||||||||||||||||||||||||||    
50664012 aaatatagtttcttattattctggcaccctcttttg 50663977  T

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