View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4336-Insertion-143 (Length: 267)
Name: NF4336-Insertion-143
Description: NF4336
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4336-Insertion-143 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 6 - 267
Target Start/End: Original strand, 54850137 - 54850398
Alignment:
| Q |
6 |
gttctcagttttgattgcctcgttatcttcaccaatttctcatatttcttggtcttgattttcaacaacgtattcatgttcatcaacaacaatcagattc |
105 |
Q |
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| T |
54850137 |
gttctcagttttgattgcctcgttatcttcaccaatttctcatatttcttgctcttgattttcaacaacgtattcatgttcatcaacaacaatcagattc |
54850236 |
T |
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| Q |
106 |
catcttttttgtacatccaagcgaaggacctaattcagctacaacttctcataagctcaacggaaccaattatctcacatggagtcgttatatgcaacat |
205 |
Q |
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| T |
54850237 |
catcttttttgtacatccaaacgaagtacctaattcagctacaacttcccataagctcaacggaaccaattatctcacatggagtcgttatatgcaacat |
54850336 |
T |
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| Q |
206 |
gttttaagcgccaaagacaaactcgcattcatcagtggctctacaccaattccatatcacca |
267 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
54850337 |
gttttaagcgccaaagacaaactcgcattcatcagtggctctacaccaattccatatcacca |
54850398 |
T |
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