View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4336-Insertion-39 (Length: 231)
Name: NF4336-Insertion-39
Description: NF4336
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4336-Insertion-39 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 43051388 - 43051153
Alignment:
| Q |
1 |
ccttttttcttcttgttgtttagtgttgttgtaatgtaatgt-----gattgtgaccttcaaatattgtttttaaataagggttggaatggaattggatg |
95 |
Q |
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| T |
43051388 |
ccttttttcttcttgttgtgtagtgttgttgtaatgtaatgtaatatgattgtgaccttcaaatattgtttttaaataagggttggaatggaattggatg |
43051289 |
T |
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| Q |
96 |
atgggtgagtgatgatgcacgctttacctccattcaattgttgccactcatttaccttctccttcattttaggactcaactaactactctctctatttac |
195 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43051288 |
atgggtgagtgatgatgcacgctttacctccattcaattgttgccactcatttaccttctccttcattttaggactcaactaactactctctctatttac |
43051189 |
T |
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| Q |
196 |
tattcctattcttatctctctcccgaaatagattat |
231 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
43051188 |
tattcctattcttatctctctcccgaaatagattat |
43051153 |
T |
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