View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4336-Insertion-9 (Length: 261)
Name: NF4336-Insertion-9
Description: NF4336
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4336-Insertion-9 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 6 - 261
Target Start/End: Complemental strand, 55316942 - 55316687
Alignment:
| Q |
6 |
cttttatcactagcttctgtttaatgaatgaaaaactggttccgaaatactcttacccggcaactaggattttgacttgctatcatgaattagcttcatt |
105 |
Q |
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| T |
55316942 |
cttttatcactagcttctgtttaatgaatgaaaaactggttccgaaatactcttacccggcaactaggattttgacttgctatcatgaattagcttcatt |
55316843 |
T |
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| Q |
106 |
gaactatataagataagaaggcagtagatttggactgtagaaaaatatagtattgatacaagtaggaaatgcctgaaattaatgcagtccaaaggccata |
205 |
Q |
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| T |
55316842 |
gaactatataagataagaaggcagtagatttggactgtagaaaaatatagtattgatacaggtaggaaatgcctgaaattaatgcagtccaaaggccata |
55316743 |
T |
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| Q |
206 |
aattcccaacggttggattgtcatagaatgcaataaatcatggcttgggagctttg |
261 |
Q |
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| T |
55316742 |
aattcccaacggtgggattgtcatagaatgcaataaatcatggcttgggagctttg |
55316687 |
T |
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