View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4336-Insertion-91 (Length: 44)
Name: NF4336-Insertion-91
Description: NF4336
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4336-Insertion-91 |
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| [»] chr7 (1 HSPs) |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 41; Significance: 0.000000000000003; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 14571228 - 14571268
Alignment:
| Q |
4 |
attatgggcataatttgtactttatagaaaagttcaaggag |
44 |
Q |
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| T |
14571228 |
attatgggcataatttgtactttatagaaaagttcaaggag |
14571268 |
T |
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Target: chr6 (Bit Score: 33; Significance: 0.0000000002; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 19783215 - 19783255
Alignment:
| Q |
4 |
attatgggcataatttgtactttatagaaaagttcaaggag |
44 |
Q |
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||||||| |||||||| |||||||||||||||||||||||| |
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| T |
19783215 |
attatggccataatttatactttatagaaaagttcaaggag |
19783255 |
T |
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