View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4336_high_1 (Length: 829)

Name: NF4336_high_1
Description: NF4336
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4336_high_1
NF4336_high_1
[»] chr3 (47 HSPs)
chr3 (496-820)||(4537523-4537850)
chr3 (18-426)||(4537041-4537452)
chr3 (18-155)||(13628802-13628939)
chr3 (18-148)||(8247706-8247836)
chr3 (18-155)||(516419-516557)
chr3 (18-148)||(46421054-46421184)
chr3 (18-154)||(29366733-29366869)
chr3 (18-155)||(13730614-13730751)
chr3 (19-147)||(45139497-45139624)
chr3 (18-155)||(40272824-40272959)
chr3 (36-156)||(10795434-10795554)
chr3 (18-154)||(34420656-34420791)
chr3 (58-155)||(45786226-45786323)
chr3 (18-150)||(9607213-9607345)
chr3 (18-156)||(26573137-26573273)
chr3 (18-155)||(22609776-22609910)
chr3 (51-155)||(54484733-54484836)
chr3 (18-155)||(5173731-5173867)
chr3 (50-155)||(49013485-49013590)
chr3 (18-155)||(53996577-53996713)
chr3 (23-156)||(54374356-54374488)
chr3 (51-155)||(14987000-14987104)
chr3 (21-92)||(39212003-39212074)
chr3 (18-155)||(6411834-6411968)
chr3 (18-156)||(25944479-25944616)
chr3 (18-84)||(30928228-30928294)
chr3 (18-154)||(7943000-7943134)
chr3 (67-155)||(353361-353449)
chr3 (104-155)||(31592941-31592992)
chr3 (104-155)||(52926231-52926282)
chr3 (18-155)||(26869717-26869851)
chr3 (34-155)||(44403567-44403687)
chr3 (103-155)||(829454-829506)
chr3 (104-148)||(10300585-10300629)
chr3 (18-74)||(10870042-10870098)
chr3 (103-155)||(25517182-25517234)
chr3 (19-151)||(33926094-33926224)
chr3 (107-155)||(45948850-45948898)
chr3 (119-155)||(47624208-47624244)
chr3 (104-155)||(24851313-24851364)
chr3 (104-155)||(34771376-34771427)
chr3 (104-155)||(39203608-39203659)
chr3 (125-155)||(4495688-4495718)
chr3 (125-155)||(10484628-10484658)
chr3 (125-155)||(54032583-54032613)
chr3 (126-155)||(40390357-40390386)
chr3 (58-147)||(55401226-55401314)
[»] scaffold0049 (1 HSPs)
scaffold0049 (18-153)||(58965-59100)
[»] chr1 (48 HSPs)
chr1 (18-151)||(46247969-46248100)
chr1 (21-155)||(10668239-10668373)
chr1 (18-155)||(20004102-20004239)
chr1 (23-155)||(35005139-35005271)
chr1 (22-156)||(19701585-19701718)
chr1 (18-153)||(23768334-23768467)
chr1 (18-153)||(27201658-27201793)
chr1 (18-155)||(18944654-18944792)
chr1 (18-155)||(30395738-30395875)
chr1 (18-155)||(35117777-35117915)
chr1 (18-155)||(6925111-6925246)
chr1 (18-155)||(14617049-14617184)
chr1 (70-155)||(18741969-18742054)
chr1 (18-156)||(32632568-32632703)
chr1 (18-155)||(34725110-34725243)
chr1 (104-155)||(45402191-45402242)
chr1 (18-147)||(11596524-11596650)
chr1 (97-155)||(42304219-42304277)
chr1 (18-155)||(46991815-46991950)
chr1 (39-156)||(22324925-22325040)
chr1 (104-155)||(4349733-4349784)
chr1 (107-154)||(33594144-33594191)
chr1 (18-155)||(38478294-38478427)
chr1 (18-151)||(8197054-8197185)
chr1 (18-155)||(9939472-9939610)
chr1 (105-155)||(27474376-27474426)
chr1 (97-155)||(50606491-50606549)
chr1 (18-158)||(18724555-18724692)
chr1 (746-811)||(31252800-31252867)
chr1 (103-155)||(45264411-45264463)
chr1 (104-156)||(47214604-47214656)
chr1 (18-156)||(19932764-19932899)
chr1 (14-155)||(35253199-35253336)
chr1 (18-155)||(2435798-2435934)
chr1 (18-154)||(41319819-41319953)
chr1 (107-155)||(1517323-1517371)
chr1 (103-151)||(6358216-6358264)
chr1 (99-159)||(30682902-30682961)
chr1 (18-74)||(33222995-33223051)
chr1 (103-151)||(41440618-41440666)
chr1 (107-155)||(43768237-43768285)
chr1 (104-155)||(4587575-4587626)
chr1 (104-155)||(23796560-23796611)
chr1 (104-155)||(30555210-30555261)
chr1 (120-155)||(35019340-35019375)
chr1 (104-155)||(45812549-45812600)
chr1 (18-92)||(4430099-4430173)
chr1 (18-100)||(50760291-50760373)
[»] chr2 (40 HSPs)
chr2 (18-155)||(10543686-10543823)
chr2 (18-155)||(14530306-14530443)
chr2 (18-155)||(24200635-24200772)
chr2 (18-155)||(11514424-11514558)
chr2 (18-155)||(31158451-31158588)
chr2 (18-155)||(8455328-8455463)
chr2 (18-156)||(7214522-7214660)
chr2 (18-155)||(9671168-9671302)
chr2 (21-155)||(10546153-10546286)
chr2 (18-159)||(14544051-14544193)
chr2 (97-155)||(23488548-23488606)
chr2 (27-156)||(32781300-32781426)
chr2 (19-156)||(19614981-19615117)
chr2 (51-155)||(40762246-40762348)
chr2 (104-156)||(14444800-14444852)
chr2 (98-150)||(19185760-19185812)
chr2 (18-156)||(19977725-19977861)
chr2 (18-151)||(99281-99410)
chr2 (104-155)||(44643595-44643646)
chr2 (18-155)||(17667990-17668125)
chr2 (19-159)||(45235825-45235964)
chr2 (18-155)||(5841016-5841153)
chr2 (104-156)||(30826108-30826159)
chr2 (18-155)||(21779273-21779406)
chr2 (18-155)||(23397754-23397887)
chr2 (104-155)||(24860000-24860051)
chr2 (18-155)||(25079729-25079865)
chr2 (18-155)||(12023931-12024065)
chr2 (104-154)||(31523303-31523353)
chr2 (107-153)||(34766330-34766376)
chr2 (106-155)||(40579761-40579810)
chr2 (119-155)||(124926-124962)
chr2 (119-155)||(22371199-22371235)
chr2 (117-156)||(8575980-8576019)
chr2 (107-154)||(24890486-24890533)
chr2 (104-155)||(36871564-36871614)
chr2 (18-154)||(17623552-17623686)
chr2 (104-153)||(17896332-17896381)
chr2 (106-147)||(33795359-33795400)
chr2 (106-155)||(41409936-41409985)
[»] chr6 (22 HSPs)
chr6 (18-155)||(12221926-12222064)
chr6 (18-155)||(29355867-29356004)
chr6 (97-155)||(12885978-12886036)
chr6 (18-156)||(9161111-9161248)
chr6 (18-155)||(1346952-1347085)
chr6 (18-155)||(1354769-1354902)
chr6 (18-155)||(3815089-3815224)
chr6 (18-145)||(14553500-14553626)
chr6 (18-156)||(32728168-32728303)
chr6 (21-155)||(2166422-2166556)
chr6 (21-155)||(2178055-2178189)
chr6 (105-155)||(6808468-6808518)
chr6 (89-155)||(12892066-12892132)
chr6 (104-150)||(32579497-32579543)
chr6 (104-155)||(13267797-13267848)
chr6 (104-151)||(24097649-24097696)
chr6 (117-148)||(29016301-29016332)
chr6 (97-155)||(3116141-3116199)
chr6 (117-155)||(10734917-10734955)
chr6 (18-92)||(20400655-20400729)
chr6 (117-159)||(20906794-20906836)
chr6 (106-155)||(23930139-23930188)
[»] chr5 (29 HSPs)
chr5 (18-155)||(38879569-38879706)
chr5 (18-155)||(4619116-4619253)
chr5 (18-155)||(43334190-43334327)
chr5 (18-153)||(27328740-27328875)
chr5 (18-155)||(12006340-12006477)
chr5 (18-155)||(24448878-24449013)
chr5 (18-155)||(32703412-32703545)
chr5 (104-155)||(16957386-16957437)
chr5 (18-153)||(22187273-22187408)
chr5 (105-155)||(25622533-25622583)
chr5 (18-155)||(41014307-41014441)
chr5 (58-155)||(13801779-13801876)
chr5 (107-155)||(39801591-39801639)
chr5 (22-155)||(42924842-42924977)
chr5 (104-155)||(43574678-43574729)
chr5 (18-156)||(28516444-28516581)
chr5 (114-156)||(31694119-31694161)
chr5 (103-148)||(10306493-10306538)
chr5 (120-153)||(18684361-18684394)
chr5 (104-156)||(7097771-7097823)
chr5 (103-155)||(21784344-21784396)
chr5 (51-155)||(29334416-29334519)
chr5 (18-73)||(37024646-37024701)
chr5 (107-153)||(5873336-5873382)
chr5 (125-155)||(13774958-13774988)
chr5 (58-155)||(16880659-16880754)
chr5 (104-154)||(19142956-19143006)
chr5 (117-155)||(32354212-32354250)
chr5 (114-155)||(29184073-29184114)
[»] chr4 (52 HSPs)
chr4 (18-155)||(16408613-16408750)
chr4 (18-155)||(54730237-54730375)
chr4 (18-155)||(44363142-44363279)
chr4 (18-155)||(21646952-21647089)
chr4 (51-155)||(20639670-20639773)
chr4 (18-156)||(25463110-25463245)
chr4 (18-155)||(6430638-6430772)
chr4 (18-155)||(35567158-35567293)
chr4 (18-154)||(5648247-5648380)
chr4 (18-150)||(16911550-16911682)
chr4 (18-155)||(23501781-23501912)
chr4 (18-155)||(40915817-40915951)
chr4 (18-155)||(11054160-11054293)
chr4 (18-148)||(17043413-17043541)
chr4 (22-155)||(29207910-29208039)
chr4 (18-155)||(54175051-54175188)
chr4 (18-155)||(19027836-19027971)
chr4 (97-155)||(30352592-30352650)
chr4 (105-155)||(38755920-38755970)
chr4 (18-154)||(20908649-20908785)
chr4 (107-156)||(30690187-30690236)
chr4 (104-156)||(14983906-14983958)
chr4 (105-153)||(33836501-33836549)
chr4 (104-155)||(11394924-11394975)
chr4 (104-155)||(11404651-11404702)
chr4 (18-155)||(20224972-20225105)
chr4 (106-149)||(44718641-44718684)
chr4 (102-153)||(47482864-47482915)
chr4 (18-155)||(48598837-48598970)
chr4 (18-155)||(487138-487282)
chr4 (117-155)||(35532077-35532115)
chr4 (117-155)||(40553949-40553987)
chr4 (105-155)||(50555668-50555718)
chr4 (58-155)||(51865050-51865145)
chr4 (53-153)||(20405109-20405210)
chr4 (22-154)||(30639372-30639501)
chr4 (106-155)||(32484307-32484356)
chr4 (105-153)||(8820581-8820629)
chr4 (79-155)||(20225123-20225199)
chr4 (18-74)||(42164239-42164295)
chr4 (18-73)||(5306755-5306810)
chr4 (103-154)||(21489159-21489210)
chr4 (104-155)||(25629121-25629172)
chr4 (104-155)||(28494223-28494274)
chr4 (104-155)||(38786681-38786732)
chr4 (105-156)||(55830732-55830783)
chr4 (97-151)||(16494284-16494338)
chr4 (105-155)||(25388249-25388299)
chr4 (126-156)||(37038134-37038164)
chr4 (103-149)||(49938611-49938657)
chr4 (105-155)||(55766478-55766528)
chr4 (58-155)||(13256411-13256508)
[»] chr8 (37 HSPs)
chr8 (18-155)||(39461006-39461143)
chr8 (18-155)||(36720784-36720919)
chr8 (18-155)||(20284081-20284220)
chr8 (18-153)||(28817640-28817773)
chr8 (18-155)||(21070709-21070849)
chr8 (18-155)||(44530137-44530272)
chr8 (18-123)||(11748287-11748392)
chr8 (18-154)||(44781517-44781653)
chr8 (18-155)||(17823564-17823699)
chr8 (22-155)||(29521697-29521828)
chr8 (34-155)||(6760826-6760947)
chr8 (18-155)||(7136539-7136676)
chr8 (18-156)||(2626507-2626646)
chr8 (18-155)||(12670262-12670395)
chr8 (18-155)||(30454109-30454242)
chr8 (18-155)||(35261667-35261802)
chr8 (18-155)||(45071253-45071387)
chr8 (58-155)||(16225047-16225144)
chr8 (34-154)||(26954136-26954257)
chr8 (18-152)||(13160690-13160821)
chr8 (18-155)||(8897776-8897911)
chr8 (97-155)||(16013521-16013579)
chr8 (51-156)||(29877115-29877218)
chr8 (39-155)||(5689640-5689754)
chr8 (23-155)||(8483950-8484080)
chr8 (51-155)||(20869944-20870048)
chr8 (104-155)||(12625962-12626013)
chr8 (118-155)||(27468104-27468141)
chr8 (119-155)||(18164772-18164808)
chr8 (18-74)||(18164850-18164906)
chr8 (107-155)||(27507985-27508033)
chr8 (18-73)||(20869588-20869643)
chr8 (104-155)||(26102589-26102640)
chr8 (104-155)||(28407475-28407526)
chr8 (104-155)||(31457244-31457295)
chr8 (79-148)||(24245495-24245565)
chr8 (18-155)||(25250510-25250647)
[»] chr7 (38 HSPs)
chr7 (18-155)||(42805512-42805649)
chr7 (20-155)||(47716449-47716584)
chr7 (18-155)||(22698979-22699117)
chr7 (18-153)||(23419688-23419821)
chr7 (18-153)||(42798657-42798790)
chr7 (18-155)||(2541031-2541167)
chr7 (18-155)||(11617600-11617735)
chr7 (18-155)||(43557460-43557598)
chr7 (18-155)||(14732833-14732969)
chr7 (101-156)||(45018934-45018989)
chr7 (34-155)||(7879642-7879761)
chr7 (18-154)||(10693086-10693218)
chr7 (18-155)||(40463865-40463999)
chr7 (18-155)||(48735134-48735268)
chr7 (18-153)||(5180169-5180304)
chr7 (18-155)||(18747474-18747610)
chr7 (18-155)||(21172021-21172154)
chr7 (18-156)||(33871921-33872056)
chr7 (18-155)||(42391112-42391245)
chr7 (79-152)||(33500562-33500635)
chr7 (97-158)||(39123960-39124021)
chr7 (18-155)||(32758249-32758382)
chr7 (120-155)||(36602535-36602570)
chr7 (18-143)||(14099030-14099153)
chr7 (18-143)||(14409047-14409170)
chr7 (18-147)||(28362165-28362292)
chr7 (105-155)||(35334828-35334878)
chr7 (117-155)||(42495874-42495912)
chr7 (105-154)||(18512466-18512515)
chr7 (34-155)||(21566439-21566559)
chr7 (18-156)||(42476861-42476995)
chr7 (97-152)||(3469190-3469245)
chr7 (28-155)||(16341276-16341402)
chr7 (104-147)||(27889336-27889379)
chr7 (125-155)||(25434113-25434143)
chr7 (104-150)||(34626225-34626271)
chr7 (18-146)||(19266438-19266564)
chr7 (51-155)||(23231578-23231680)
[»] scaffold0258 (1 HSPs)
scaffold0258 (18-155)||(13036-13170)
[»] scaffold0057 (3 HSPs)
scaffold0057 (18-155)||(46819-46954)
scaffold0057 (58-153)||(24786-24879)
scaffold0057 (103-153)||(46721-46771)
[»] scaffold0311 (1 HSPs)
scaffold0311 (18-154)||(10798-10932)
[»] scaffold0223 (1 HSPs)
scaffold0223 (21-156)||(11122-11253)
[»] scaffold0168 (1 HSPs)
scaffold0168 (18-155)||(30567-30700)
[»] scaffold1176 (1 HSPs)
scaffold1176 (104-156)||(1598-1650)
[»] scaffold0018 (1 HSPs)
scaffold0018 (104-156)||(72878-72930)
[»] scaffold0187 (2 HSPs)
scaffold0187 (18-73)||(10140-10195)
scaffold0187 (18-73)||(20468-20523)
[»] scaffold0180 (1 HSPs)
scaffold0180 (104-155)||(24145-24196)
[»] scaffold0015 (1 HSPs)
scaffold0015 (104-155)||(48646-48697)
[»] scaffold0954 (1 HSPs)
scaffold0954 (51-155)||(3565-3667)
[»] scaffold0194 (1 HSPs)
scaffold0194 (79-155)||(24697-24771)


Alignment Details
Target: chr3 (Bit Score: 236; Significance: 1e-130; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 496 - 820
Target Start/End: Original strand, 4537523 - 4537850
Alignment:
Q  496 atgaaaattatacacatat--aaaattatacatggatcgaaggtaagcggacattaaactgaacggctaaatctttttagaaggtgaaaccaatcctctt 593  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||    
T  4537523 atgaaaattatacacatatataaaattatacatggatcgaaggtaagcggacactaaactgaacggctaaacctttttagatggtgaaaccaatcctctt 4537622  T
Q  594 aaaacaacattcatagaccnnnnnnncacaacattgctatgcatacccctttgaaatatttgacgaagggctacaaattttggtgctagaaagcaaaaag 693  Q
    |||||||||||||||||||       |||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  4537623 aaaacaacattcatagacctagaaaacacaacattgctatgcatacccttttgaaatatttgaagaagggctacaagttttggtgctagaaagcaaaaag 4537722  T
Q  694 tgt-nnnnnnnntaatattaaagtatgttgattgtagaacaagttttctcatgtatgttgattggagttgctaatatattcctctgtcaatgttgttaat 792  Q
    |||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4537723 tgtaaaaaaaaaaaatattaaagtatgttgattgtagaacaagttttctcatgtatgttgattggagttgctaatatattcctctgtcaatgttgttaat 4537822  T
Q  793 ttgttcttagttagtattcatgatgatg 820  Q
    ||||||||||||||||||||||||||||    
T  4537823 ttgttcttagttagtattcatgatgatg 4537850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 18 - 426
Target Start/End: Original strand, 4537041 - 4537452
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgt---aaaaaactaggtaagactacgtataacacacaaaaaatggtggaa 114  Q
    ||||||||| ||||| ||||||||||||||||||||||| ||||| ||||     |||||||||||||||||| ||||||| |||  ||||||| | | |    
T  4537041 gtcatgtgattgaaaggtcacgggtttaagttttggaaacagcctttttttataaaaaaaactaggtaagactgcgtataatacatcaaaaatgatagga 4537140  T
Q  115 ctccttcccagaccctgcgtatgcgggagctttagtgcaccaagtaggagaagtgctgacatttgatat-aacaatggcacgaataagatgattgtagtt 213  Q
    |||||||||| ||||| ||||||||| ||||||| ||||  |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  4537141 ctccttcccaaaccctacgtatgcggaagctttaatgcattaagtaggagaagtgctgacatttgatatcaacaatgccacgaataagatgattgtagtt 4537240  T
Q  214 gctgaaatggaaatnnnnnnnn---gtcaatgttttgttggaatatatgaatattattcaacattcattgtaacaacactattaagcaatatctttaaaa 310  Q
    ||||||||||||||           ||||||||||||||||||||| ||||||||||||||||||    |||| ||||||||||||||||||||||||||    
T  4537241 gctgaaatggaaattaaaaaaaaaagtcaatgttttgttggaatatgtgaatattattcaacatt----gtaataacactattaagcaatatctttaaaa 4537336  T
Q  311 actagatcagtattattggcgatgacaggccaaactataagcttgttctaaacaatacttagaggcctgctatttcattttattcttattgtctagactt 410  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4537337 actagatcagtattattggcgataacaggccaaaccataagcttggtctaaacaatacttaaaggcctgctatttcattttattcttattgtctagactt 4537436  T
Q  411 ccaaattatttatcta 426  Q
    ||||||||||||||||    
T  4537437 ccaaattatttatcta 4537452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 13628939 - 13628802
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||||||||| ||||  |||||| |||||||| ||||| ||||  |||||| || |||| || |||| || |||||||| || |    
T  13628939 gtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggctgcgtacaatacaccaataatggtgggaccc 13628840  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||||||||||||||||||||||||||||||    
T  13628839 cttcccggaccctgcgtatgcgggagctttagtgcacc 13628802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 18 - 148
Target Start/End: Complemental strand, 8247836 - 8247706
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||||||||| ||||  |||||| |||||||| ||||||||||  ||||||  | |||| || |||| || |||||||| ||||    
T  8247836 gtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggttgcgtacaatacaccaataatggtgggactc 8247737  T
Q  118 cttcccagaccctgcgtatgcgggagcttta 148  Q
    |||||| ||||||||||||||||||||||||    
T  8247736 cttcccggaccctgcgtatgcgggagcttta 8247706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 516419 - 516557
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacaca-caaaaaatggtggaact 116  Q
    ||||||||||||||| |||||||||| ||||  |||||| |||||||| ||||||||||  |||||| || || | || | | |||||||||| || ||     
T  516419 gtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgcacaataaaccaaaaaatggcgggacc 516518  T
Q  117 ccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  516519 ccttccccgaccctgcgtatgcgggagctttagtgcacc 516557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 18 - 148
Target Start/End: Complemental strand, 46421184 - 46421054
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||| ||| |||||||||| ||||  |||||| |||||||| ||||||||||  |||||| || |||| || |||| || |||||||| || |    
T  46421184 gtcatgtgacttaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccc 46421085  T
Q  118 cttcccagaccctgcgtatgcgggagcttta 148  Q
    |||||| ||||||||||||||||||||||||    
T  46421084 cttcccggaccctgcgtatgcgggagcttta 46421054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 29366869 - 29366733
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||| ||| |||||||||| ||||  |||||| |||||||| | ||||||||  |||||| || |||| || |||| || |||||||| || |    
T  29366869 gtcatgtgactaaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccc 29366770  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcac 154  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  29366769 cttcccggaccctgcgtatgtgggagctttagtgcac 29366733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 13730751 - 13730614
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||| || |||||||||| ||||  |||||| |||||||| ||||||||||  |||||| ||  ||| || |||| || |||||||| || |    
T  13730751 gtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaatacaccaataatggtgggaccc 13730652  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| ||||| || ||||||||||||||||||||||    
T  13730651 cttcccggaccccgcatatgcgggagctttagtgcacc 13730614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 19 - 147
Target Start/End: Complemental strand, 45139624 - 45139497
Alignment:
Q  19 tcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactcc 118  Q
    |||||||||||||| |||||||||| |||||||||||| | |||||| ||||||| ||  |||||| || | || || |||| ||||||||||| || ||    
T  45139624 tcatgtgactgaaaggtcacgggttcaagttttggaaacaacctcttgtgtaaaacacagggtaaggctgcatacaatacaccaaaaatggtgggacccc 45139525  T
Q  119 ttcccagaccctgcgtatgcgggagcttt 147  Q
    |||||||| ||||||||||||||| ||||    
T  45139524 ttcccaga-cctgcgtatgcgggaacttt 45139497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 40272959 - 40272824
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||| || |||| ||||| ||||  |||||| | |||||| ||||||||||  |||||| || |||| || |||| |||  |||||| || |    
T  40272959 gtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaa--tggtgggaccc 40272862  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||||||||||||||||||||||||||||||    
T  40272861 cttcccggaccctgcgtatgcgggagctttagtgcacc 40272824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 36 - 156
Target Start/End: Complemental strand, 10795554 - 10795434
Alignment:
Q  36 cacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttcccagaccctgcgta 135  Q
    |||||||| ||||  |||||| |||||||| ||||||| ||  |||||| || |||| || |||| ||||||||||| || ||||||  |||||||||||    
T  10795554 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 10795455  T
Q  136 tgcgggagctttagtgcacca 156  Q
    ||||||||||| |||||||||    
T  10795454 tgcgggagcttcagtgcacca 10795434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 34420791 - 34420656
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||| |||||||||| |||||||||| ||||  |||||| |||||||| ||||||||||  |||||| || ||||  | |||| |||| |||||| || |    
T  34420791 gtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtaccatacaccaaaa-tggtgggaccc 34420693  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcac 154  Q
    |||||| |||| |||||||| ||||||||||||||||    
T  34420692 cttcccggaccttgcgtatgtgggagctttagtgcac 34420656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 45786323 - 45786226
Alignment:
Q  58 agcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||||| ||||||||||  |||||| || |||| || |||| ||||||||||| || ||||||| ||||||||| |||| ||||||||||||||||    
T  45786323 agcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgaatgctggagctttagtgcacc 45786226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 9607213 - 9607345
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| ||||  |||| ||||  |||||| ||||||||  |||||||||  |||||| || |||| || |||| || |||| ||| || |    
T  9607213 gtcatgtgactgaaaggtcatcggttcaagtcctggaaacagcctcttgcgtaaaaaacagggtaaggctgcgtagaatacaccaataatgttgggaccc 9607312  T
Q  118 cttcccagaccctgcgtatgcgggagctttagt 150  Q
    |||||||||||| || |||||||||||||||||    
T  9607313 cttcccagaccccgcatatgcgggagctttagt 9607345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 26573137 - 26573273
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||| |||||||||| |||||||||| ||||  |||||| |||||| | ||||||||||  |||||| || |||| || |||| ||   |||||| || |    
T  26573137 gtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaacagggtaaggctgcgtacaatacaccaat--tggtgggaccc 26573234  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacca 156  Q
    | |||| ||||||||||||||| ||||||||||||||||    
T  26573235 catcccggaccctgcgtatgcgtgagctttagtgcacca 26573273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 22609776 - 22609910
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||| || || ||||||| |||| ||||||| |||||||| |||||||| |  |||||| || |||| || |||| |||  |||||| || |    
T  22609776 gtcatgtgactgtaaggtaacgggttcaagtcttggaaacagcctcttgtgtaaaaa-cagggtaaggctgcgtacaatacaccaaa--tggtgggaccc 22609872  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||| ||||||||||||||||| ||||||||    
T  22609873 cttcccggaccttgcgtatgcgggagcttcagtgcacc 22609910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 51 - 155
Target Start/End: Original strand, 54484733 - 54484836
Alignment:
Q  51 tggaaatagcctcttttgtaaaaaa-ctaggtaagactacgtataacacacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttag 149  Q
    |||||| |||||||| ||||||||| | ||||||| || |||| || |||| |||  |||||| || ||||||| |||||||||||||||||||||||||    
T  54484733 tggaaacagcctcttgtgtaaaaaaacaaggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttag 54484830  T
Q  150 tgcacc 155  Q
    ||||||    
T  54484831 tgcacc 54484836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 5173867 - 5173731
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||||||||| ||||  |||||| | |||||| |||||||| | | |||||  | | |  || |||| |||||||||||  | |    
T  5173867 gtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaa-caaagtaaggttgcatgcaatacaccaaaaatggtggggccc 5173769  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  5173768 cttcccggaccttgcgtatgcgggagctttagtgcacc 5173731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 155
Target Start/End: Complemental strand, 49013590 - 49013485
Alignment:
Q  50 ttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttag 149  Q
    ||||||| |||||||| ||||||||||  |||||| || |||| || |||| || |||||||| || ||||||| ||||| || || |||||||||||||    
T  49013590 ttggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatacgcgggagctttag 49013491  T
Q  150 tgcacc 155  Q
    ||||||    
T  49013490 tgcacc 49013485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 53996713 - 53996577
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||| ||||||||| |||||| ||| ||||  |||||| | |||||| ||||||||||  |||||| || | || || |||| |||| |||||| || |    
T  53996713 gtcatttgactgaaaggtcacgtgttcaagtcgtggaaacaacctcttgtgtaaaaaacagggtaaggctgcttacaatacaccaaaa-tggtgggaccc 53996615  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| ||| ||||||||| |||||||||||||||||    
T  53996614 cttccctgacactgcgtatgtgggagctttagtgcacc 53996577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 156
Target Start/End: Complemental strand, 54374488 - 54374356
Alignment:
Q  23 gtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttcc 122  Q
    |||||||||| ||||| |||| |||| ||||||| | |||||| |||||||||   |||||| || |||| ||  ||| |||| |||||| || ||||||    
T  54374488 gtgactgaaaggtcacaggttcaagtcttggaaacaacctcttgtgtaaaaaatagggtaaggctgcgtacaatccaccaaaa-tggtgggaccccttcc 54374390  T
Q  123 cagaccctgcgtatgcgggagctttagtgcacca 156  Q
    | |||||||| ||||||||||||||||| |||||    
T  54374389 cggaccctgcatatgcgggagctttagttcacca 54374356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 51 - 155
Target Start/End: Original strand, 14987000 - 14987104
Alignment:
Q  51 tggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagt 150  Q
    |||||| |||||||| ||||||||||  |||||| || |||| || |||| || |||||||| || | ||||| |||| ||| |||||||||||||||||    
T  14987000 tggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggacccattcccggaccttgcatatgcgggagctttagt 14987099  T
Q  151 gcacc 155  Q
    |||||    
T  14987100 gcacc 14987104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 39212003 - 39212074
Alignment:
Q  21 atgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgta 92  Q
    ||||||||||||||||||||||| ||||  |||||||| |||||| |||||| ||| |||||||||| ||||    
T  39212003 atgtgactgaaatgtcacgggttcaagtcctggaaataacctcttgtgtaaataacaaggtaagactgcgta 39212074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 6411968 - 6411834
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||| ||||| | |||| ||||| |||| ||| ||| |||||||| |||||||| |  |||||| || |||| || |||| |||  || ||| || |    
T  6411968 gtcatgtaactgataggtcatgggttcaagtcttgtaaacagcctcttgtgtaaaaa-cagggtaaggctgcgtacaatacaccaaa--tgatgggaccc 6411872  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  6411871 cttcccagaccttgcgtatgcgggagctttagtgcacc 6411834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 25944479 - 25944616
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||| |||||||||| |||| ||||| ||||  ||||||  ||||||  ||||||||||| || ||| ||  ||| || |||| |||| |||||| || |    
T  25944479 gtcacgtgactgaaaggtcatgggttcaagtcctggaaaccgcctctcgtgtaaaaaactgggcaaggctgagtacaatacaccaaaa-tggtgggaccc 25944577  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacca 156  Q
    |||||| ||||||||||||| ||||||||||| ||||||    
T  25944578 cttccctgaccctgcgtatgtgggagctttagcgcacca 25944616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 30928294 - 30928228
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaag 84  Q
    ||||||||||||||| |||||||||| ||||  |||||| |||||||| |||||||||| |||||||    
T  30928294 gtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggtaag 30928228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 7943000 - 7943134
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||| || ||||||| || ||||  |||||| ||| |||| | ||||||||  ||||||||| |||| |  | |||  ||||||||| |  |    
T  7943000 gtcatgtgactggaaggtcacggattcaagtcctggaaacagcatcttgtctaaaaaacagggtaagactgcgtaca--atacatcaaatggtgggatcc 7943097  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcac 154  Q
    ||| ||||||| |||||||||||||||||||||||||    
T  7943098 ctttccagaccatgcgtatgcgggagctttagtgcac 7943134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 155
Target Start/End: Complemental strand, 353449 - 353361
Alignment:
Q  67 tgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||||  |||||| || |||| || |||| || |||||||| || ||||||| ||||| || ||||||||||||||||||||||    
T  353449 tgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcacc 353361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 31592941 - 31592992
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||| |||||||||| |||||||| |||||||||||| |||||||||    
T  31592941 aaatggtgggactccttcccggaccctgcatatgcgggagctctagtgcacc 31592992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 155
Target Start/End: Complemental strand, 52926282 - 52926231
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||| || ||||||| ||||||||||||||||||||||||| |||||    
T  52926282 aaatggtgggacaccttcccggaccctgcgtatgcgggagctttagcgcacc 52926231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 26869717 - 26869851
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| ||||| |||| ||||  |||||| |||||||  ||| ||||||  |||||| || |||| || ||||   ||||||||| || |    
T  26869717 gtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctctggtgt-aaaaacagggtaaggctgcgtacaatacac--caaatggtgggaccc 26869813  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||| || |||| |||||||||||||||||| |||||||    
T  26869814 cttgccggaccatgcgtatgcgggagctttggtgcacc 26869851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 155
Target Start/End: Complemental strand, 44403687 - 44403567
Alignment:
Q  34 gtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttcccagaccctgcg 133  Q
    ||||| |||| ||||  ||| ||||||||||| ||||||| || ||||||| || || | || || || |||||||||| || ||||||| |||||| ||    
T  44403687 gtcacaggttaaagtcctgggaatagcctcttgtgtaaaagacaaggtaaggctgcggagaatac-cacaaaatggtgggaccccttcccggaccctacg 44403589  T
Q  134 tatgcgggagctttagtgcacc 155  Q
    ||||| | ||||||||||||||    
T  44403588 tatgctgaagctttagtgcacc 44403567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 155
Target Start/End: Complemental strand, 829506 - 829454
Alignment:
Q  103 aaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||||||| || |||||||  ||||||||||||| ||||||||||||||||    
T  829506 aaaatggtgggaccccttcccgaaccctgcgtatgcaggagctttagtgcacc 829454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 10300585 - 10300629
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagcttta 148  Q
    ||||| ||| ||||||||||||||||| |||||||||||||||||    
T  10300585 aaatgatgggactccttcccagaccctacgtatgcgggagcttta 10300629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 10870098 - 10870042
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaa 74  Q
    ||||||||||||||| |||||||||| ||||  |||||| |||||||| ||||||||    
T  10870098 gtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 10870042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 155
Target Start/End: Complemental strand, 25517234 - 25517182
Alignment:
Q  103 aaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||||||| || ||||||| || ||||||||||| ||||||||||||||||    
T  25517234 aaaatggtgggaccccttcccggatcctgcgtatgctggagctttagtgcacc 25517182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 33926094 - 33926224
Alignment:
Q  19 tcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactcc 118  Q
    |||||||||||||| |||| ||||| ||||  ||||||||||||||| ||| ||||||  |||||| ||  ||| || ||||  | |||||||| || ||    
T  33926094 tcatgtgactgaaaggtcatgggttcaagtcctggaaatagcctcttgtgt-aaaaacagggtaaggctgtgtacaatacac-cataatggtgggacccc 33926191  T
Q  119 ttcccagaccctgcgtatgcgggagctttagtg 151  Q
    ||||  |||||||| |||||| |||||||||||    
T  33926192 ttcctggaccctgcatatgcgagagctttagtg 33926224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 45948898 - 45948850
Alignment:
Q  107 tggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| || ||||| | |||||||||||||||||||||||||||||||    
T  45948898 tggtgggaccccttctcggaccctgcgtatgcgggagctttagtgcacc 45948850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 155
Target Start/End: Original strand, 47624208 - 47624244
Alignment:
Q  119 ttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||| |||||||||||||||||||||||||||||||    
T  47624208 ttcccggaccctgcgtatgcgggagctttagtgcacc 47624244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 155
Target Start/End: Complemental strand, 24851364 - 24851313
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||| || ||||||| || ||||| ||||||||||||||||||||||    
T  24851364 aaatggtgggaccccttcccggatcctgcatatgcgggagctttagtgcacc 24851313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 155
Target Start/End: Complemental strand, 34771427 - 34771376
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||| || ||||||| |||||||| |||||||||||| |||||||||    
T  34771427 aaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcacc 34771376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 39203608 - 39203659
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||| || ||||||| |||| ||| ||||||||||||||||||||||    
T  39203608 aaatggtgggaccccttcccggaccttgcatatgcgggagctttagtgcacc 39203659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 155
Target Start/End: Complemental strand, 4495718 - 4495688
Alignment:
Q  125 gaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||||||||||||||||||||||||||||    
T  4495718 gaccctgcgtatgcgggagctttagtgcacc 4495688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 155
Target Start/End: Complemental strand, 10484658 - 10484628
Alignment:
Q  125 gaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||||||||||||||||||||||||||||    
T  10484658 gaccctgcgtatgcgggagctttagtgcacc 10484628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 155
Target Start/End: Complemental strand, 54032613 - 54032583
Alignment:
Q  125 gaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||||||||||||||||||||||||||||    
T  54032613 gaccctgcgtatgcgggagctttagtgcacc 54032583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 155
Target Start/End: Original strand, 40390357 - 40390386
Alignment:
Q  126 accctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||||||||||||||||||||||||    
T  40390357 accctgcgtatgcgggagctttagtgcacc 40390386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 147
Target Start/End: Original strand, 55401226 - 55401314
Alignment:
Q  58 agcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagcttt 147  Q
    |||||||| ||||||||||  | ||||||| ||||||| |||| |||| |||||| || ||||| | |||| | ||||||||||||||||    
T  55401226 agcctcttgtgtaaaaaacaggttaagactgcgtataatacaccaaaa-tggtgggaccccttctcggaccttccgtatgcgggagcttt 55401314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 72; Significance: 3e-32; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 58965 - 59100
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||||||||| ||||  |||||| |||||||| | ||||||||  ||||||||| |||| || |||| ||||||||||| || |    
T  58965 gtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaagactgcgtacaatacaccaaaaatggtgggaccc 59064  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgca 153  Q
    |||||||||| |||||||||||||||||||||||||    
T  59065 cttcccagactctgcgtatgcgggagctttagtgca 59100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 1e-31; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 46248100 - 46247969
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||||||||||||||||| |||| ||||||| |||||||| ||||||||||  ||||||||| |||| || ||||   ||||||||| || |    
T  46248100 gtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac--caaatggtgggaccc 46248003  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtg 151  Q
    |||||| |||||||||||||||||||||||||||    
T  46248002 cttcccggaccctgcgtatgcgggagctttagtg 46247969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 10668239 - 10668373
Alignment:
Q  21 atgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactcctt 120  Q
    |||||||||||| |||||||||| ||||  |||||| |||||||| |||||||||| |||||||  | |||| || |||| || |||||||| || ||||    
T  10668239 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggtaaggttgcgtacaatacaccaataatggtgggacccctt 10668338  T
Q  121 cccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||| | |||||||||||||||||||||||||||||    
T  10668339 cccggtccctgcgtatgcgggagctttagtgcacc 10668373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 20004239 - 20004102
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||| || |||||||||| ||||  |||||| |||||||  |||||||||| ||||||| || |||| || |||| || |||||||| || |    
T  20004239 gtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctctcgtgtaaaaaacaaggtaaggctgcgtacaatacaccaataatggtgggaccc 20004140  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||||||||| || ||||||||||||||||||||||    
T  20004139 cttcccagaccccgcatatgcgggagctttagtgcacc 20004102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 23 - 155
Target Start/End: Original strand, 35005139 - 35005271
Alignment:
Q  23 gtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttcc 122  Q
    |||||||||| |||||||||| |||| ||| ||| |||||||| ||||||||||  |||||| || | || || |||| ||||||||||| || ||||||    
T  35005139 gtgactgaaaggtcacgggttcaagtcttgaaaacagcctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaaaaatggtgggaccccttcc 35005238  T
Q  123 cagaccctgcgtatgcgggagctttagtgcacc 155  Q
    | ||||||||||||||||| |||||||||||||    
T  35005239 cggaccctgcgtatgcgggcgctttagtgcacc 35005271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 22 - 156
Target Start/End: Original strand, 19701585 - 19701718
Alignment:
Q  22 tgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttc 121  Q
    |||||||||||||||||||||||||||  || ||| |||||||| ||||||||||| ||||||  |  ||| || ||||  ||||||||||  | |||||    
T  19701585 tgtgactgaaatgtcacgggtttaagtcatgaaaacagcctcttgtgtaaaaaacttggtaaggatgggtacaatacac-caaaatggtggggccccttc 19701683  T
Q  122 ccagaccctgcgtatgcgggagctttagtgcacca 156  Q
    || ||||||||||||||||||||||||||||||||    
T  19701684 ccggaccctgcgtatgcgggagctttagtgcacca 19701718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 23768467 - 23768334
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||| || ||||| |||| ||||  |||||| |||||||| ||||||||||  |||||| || |||| || |||| |||  |||||| || |    
T  23768467 gtcatgtgactgtaaggtcacaggttcaagtcatggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaa--tggtgggacac 23768370  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgca 153  Q
    ||||||||||||||||||||||||||||||||||||    
T  23768369 cttcccagaccctgcgtatgcgggagctttagtgca 23768334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 27201658 - 27201793
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||| ||||| ||||  |||||| |||||||| ||| | ||||  |||||| || |||| || |||| ||||||||||| || |    
T  27201658 gtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtcagaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccc 27201757  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgca 153  Q
    |||||| |||| ||||||||||||||||||||||||    
T  27201758 cttcccggaccttgcgtatgcgggagctttagtgca 27201793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 18944654 - 18944792
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| ||||| |||| |||   |||||| |||||||| ||||||||||  |||||| || |||| || |||| || |||||||| || |    
T  18944654 gtcatgtgactgaaaggtcacaggttcaaggcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaacaatggtgggaccc 18944753  T
Q  118 cttcccagaccctgcgtatgcgggagc-tttagtgcacc 155  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  18944754 cttcccggaccctgcgtatgcgggagcttttagtgcacc 18944792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 30395875 - 30395738
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||  || |||||||||| ||||  |||||| |||||||| ||||||||||  |||||| || |||| || |||| || |||||||| || |    
T  30395875 gtcatgtgactttaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccc 30395776  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| ||||| || ||||||||||||||||||||||    
T  30395775 cttcccggaccccgcatatgcgggagctttagtgcacc 30395738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 35117915 - 35117777
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||| |||||||||| |||||||||| ||||  ||||||||||||||| ||||||| ||  |||||| ||  ||| || |||| ||||||| ||| || |    
T  35117915 gtcacgtgactgaaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaatacagggtaaggctgtgtacaatacaccaaaaatgatgggaccc 35117816  T
Q  118 cttcccagaccctgcgt-atgcgggagctttagtgcacc 155  Q
    |||||| |||||||||| |||| ||||||||||||||||    
T  35117815 cttcccggaccctgcgtaatgcaggagctttagtgcacc 35117777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 6925111 - 6925246
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||| || |||||||||| ||||  ||||||||||||||| |||||||||   |||||| || || | || ||||  ||  |||||| || |    
T  6925111 gtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaatagggtaaggctgcggacaatacaccgaa--tggtgggaccc 6925208  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| | |||||||||||||||||||||||||||||    
T  6925209 cttcccggtccctgcgtatgcgggagctttagtgcacc 6925246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 14617049 - 14617184
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||||| ||| ||||  |||||| |||||||| |||||| ||| |||||||  | |||| || ||||   ||||||||| |  |    
T  14617049 gtcatgtgactgaaaggtcacgagttcaagtcctggaaacagcctcttgtgtaaataacaaggtaaggttgcgtacaatacac--caaatggtgggatcc 14617146  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  14617147 cttcccggaccctgcatatgcgggagctttagtgcacc 14617184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 70 - 155
Target Start/End: Complemental strand, 18742054 - 18741969
Alignment:
Q  70 aaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||||  |||||| || |||| || |||| ||||||||||| || ||||||||||||||||||||||| |||||||||||||||    
T  18742054 aaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccagaccctgcgtatgcgagagctttagtgcacc 18741969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 32632703 - 32632568
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||| ||||||||| |||||||||| ||||  |||||| |||||||| |||||||| |  |||||| || |||| || |||| |||  |||||| || |    
T  32632703 gtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa-cagggtaaggctgcgtacaatacaccaaa--tggtgggaccc 32632607  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacca 156  Q
    ||||||| ||||||| ||||||||||||| |||||||||    
T  32632606 cttcccaaaccctgcatatgcgggagcttgagtgcacca 32632568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 34725243 - 34725110
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||||||||| ||||  |||||| |||||||| ||||||| |   |||||| || |||| || |||| |||  |||||| || |    
T  34725243 gtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacag--ggtaaggctgcgtacaatacactaaa--tggtgggaccc 34725148  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||||||| |||||||||||| |||||||||    
T  34725147 cttcccggaccctgcatatgcgggagctctagtgcacc 34725110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 45402191 - 45402242
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  45402191 aaatggtgggaccccttcccagaccctgcgtatgcgggagctttagtgcacc 45402242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 11596524 - 11596650
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||||||||||||||||| ||||  | |||| | |||||| ||| ||||||  |||||| || ||||||| ||||   ||||||||| || |    
T  11596524 gtcatgtgactgaaatgtcacgggttcaagtcctagaaacaacctcttgtgt-aaaaacagggtaaggctgcgtataatacac--caaatggtgggaccc 11596620  T
Q  118 cttcccagaccctgcgtatgcgggagcttt 147  Q
    |||||  |||||||||||||||||||||||    
T  11596621 cttcctggaccctgcgtatgcgggagcttt 11596650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 97 - 155
Target Start/End: Complemental strand, 42304277 - 42304219
Alignment:
Q  97 acacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||||||||||||| || ||||||| ||||||||||||| |||||||||||||||||    
T  42304277 acacaaaaaatggtgggaccccttcccggaccctgcgtatgtgggagctttagtgcacc 42304219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 46991815 - 46991950
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||| || |||||||||| ||||  |||||| | |||||| ||||||||||  |||||| ||  ||| || ||||  ||  |||||| || |    
T  46991815 gtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgtgtacaatacaccgaa--tggtgggaccc 46991912  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| ||||||||||||| |||||||||||||||||    
T  46991913 cttcccggaccctgcgtatgtgggagctttagtgcacc 46991950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 156
Target Start/End: Original strand, 22324925 - 22325040
Alignment:
Q  39 gggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttcccagaccctgcgtatgc 138  Q
    ||||| |||| ||||||| |||||||| |||||||| |  |||||| || | || || |||| |||||||||||| | || |||| ||||||||||||||    
T  22324925 gggttcaagtcttggaaacagcctcttgtgtaaaaa-cagggtaaggctgcatacaatacaccaaaaatggtggagccccgtccc-gaccctgcgtatgc 22325022  T
Q  139 gggagctttagtgcacca 156  Q
    ||||||||||||||||||    
T  22325023 gggagctttagtgcacca 22325040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 4349733 - 4349784
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||| || ||||||| |||||||||||||||||||||||||||||||    
T  4349733 aaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcacc 4349784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 33594191 - 33594144
Alignment:
Q  107 tggtggaactccttcccagaccctgcgtatgcgggagctttagtgcac 154  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||    
T  33594191 tggtgggaccccttcccagaccctgcgtatgcgggagctttagtgcac 33594144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 38478427 - 38478294
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||||||||| ||||  | |||| |||||||| ||||||| |   |||||| || |||| || |||| |||  ||||||||| |    
T  38478427 gtcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaacag--ggtaaggctgcgtacaatacaccaaa--tggtggaaccc 38478332  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||| | |||||||| |||||||||||| |||||||||    
T  38478331 cttctcggaccctgcatatgcgggagctctagtgcacc 38478294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 8197054 - 8197185
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||||||||| ||||  ||| ||| ||||||| ||||||||||  |||||| ||||||| |  ||||   ||||||| | || |    
T  8197054 gtcatgtgactgaaaggtcacgggttcaagtcctggtaattgcctcttgtgtaaaaaacatggtaaggctacgtacagtacac--caaatggtaggaccc 8197151  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtg 151  Q
    |||| | |||||||||||||  ||||||||||||    
T  8197152 cttctcggaccctgcgtatgttggagctttagtg 8197185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 9939472 - 9939610
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||||| ||| ||||  |||||| | |||||| | ||| ||||  ||||||  | |||  || |||| ||||||||||| || |    
T  9939472 gtcatgtgactgaaaggtcacgagttcaagtcctggaaacaacctcttgtttaagaaacatggtaaggttgcgtgcaatacaccaaaaatggtgggaccc 9939571  T
Q  118 c-ttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    | ||| | |||||||||||||||||||||||||||||||    
T  9939572 ccttctcggaccctgcgtatgcgggagctttagtgcacc 9939610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 155
Target Start/End: Original strand, 27474376 - 27474426
Alignment:
Q  105 aatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||||| || ||||||| |||||||||||||||||||||||||||||||    
T  27474376 aatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcacc 27474426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 155
Target Start/End: Original strand, 50606491 - 50606549
Alignment:
Q  97 acacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||| ||||||||||| || ||||||| |||||||| ||||||||||||||||||||||    
T  50606491 acaccaaaaatggtgggaccccttcccggaccctgcatatgcgggagctttagtgcacc 50606549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 18724692 - 18724555
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||||||||| ||||  |||||| |||||||| ||||||||||  |||||| ||  ||| || ||||   ||||  ||| || |    
T  18724692 gtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaatacac--caaatcttgggaccc 18724595  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcaccaag 158  Q
    |||||| |||||| | |||||||||||||| ||||||||||    
T  18724594 cttcccggaccctacatatgcgggagcttt-gtgcaccaag 18724555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 746 - 811
Target Start/End: Complemental strand, 31252867 - 31252800
Alignment:
Q  746 tatgttgattggagtt--gctaatatattcctctgtcaatgttgttaatttgttcttagttagtattc 811  Q
    ||||||||||||||||  |||||||||||||| |||| |||||  |||||||||||||||| ||||||    
T  31252867 tatgttgattggagttctgctaatatattcctttgtccatgtttgtaatttgttcttagttggtattc 31252800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 155
Target Start/End: Complemental strand, 45264463 - 45264411
Alignment:
Q  103 aaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||||||| || ||||| |||||||||| ||||||||||||||||||||||    
T  45264463 aaaatggtgggaccccttctcagaccctgcatatgcgggagctttagtgcacc 45264411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 47214604 - 47214656
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacca 156  Q
    ||||||||| || |||||||||||||||| |||||||||||| ||||||||||    
T  47214604 aaatggtgggaccccttcccagaccctgcatatgcgggagctctagtgcacca 47214656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 19932899 - 19932764
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||| ||||| |||||  ||| | | ||| || ||||||||||  |||||| || |||| || |||| ||||||||||| || |    
T  19932899 gtcatgtgactgaaaggtcatgggttcaagtt--ggatacaacct-ttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccc 19932803  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacca 156  Q
    |||||| ||||||||||||||  || | |||||||||||    
T  19932802 cttcccggaccctgcgtatgcaagatcattagtgcacca 19932764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 155
Target Start/End: Complemental strand, 35253336 - 35253199
Alignment:
Q  14 atcagtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtgga 113  Q
    |||||| ||||||||||||  ||||||||| ||||  | |||| |||||||| ||||||| |   |||||| || |||| || |||| |||  ||||||     
T  35253336 atcagttatgtgactgaaagatcacgggttcaagtcctcgaaacagcctcttgtgtaaaacag--ggtaaggctgcgtacaatacaccaaa--tggtggg 35253241  T
Q  114 actccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    || ||||||| |||||||| |||||||||||| |||||||||    
T  35253240 accccttcccggaccctgcatatgcgggagctctagtgcacc 35253199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 2435934 - 2435798
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||| |||||||||| |||||||||| ||||  |||||| |||||| | ||| |||||   |||||| || |||| || |||| |||| |||||| || |    
T  2435934 gtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtgaaaaatagggtaagcctgcgtacaatacaccaaaa-tggtgggaccc 2435836  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||| ||  ||||| || |||||||||||||||||||||    
T  2435835 ctttccgtaccctccgcatgcgggagctttagtgcacc 2435798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 41319953 - 41319819
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| ||||| |||||||||  |||||| || ||||| ||||||||||  |||||| || |||| || ||||   ||||| ||| || |    
T  41319953 gtcatgtgactgaaaggtcacaggtttaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacac--caaatgatgggaccc 41319856  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcac 154  Q
    ||||||  ||||| | |||||||||| || |||||||    
T  41319855 cttcccgaacccttcatatgcgggagtttcagtgcac 41319819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 1517371 - 1517323
Alignment:
Q  107 tggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| || ||||| |||||||||||||||| ||||||||||||||||    
T  1517371 tggtgggaccccttctcagaccctgcgtatgcaggagctttagtgcacc 1517323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 6358216 - 6358264
Alignment:
Q  103 aaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtg 151  Q
    |||||||||| || |||||||||||||||||||||| ||| ||||||||    
T  6358216 aaaatggtgggaccccttcccagaccctgcgtatgcaggatctttagtg 6358264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 30682902 - 30682961
Alignment:
Q  99 acaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcaccaagt 159  Q
    |||| ||||||||| || ||||||| |||| |||||||||||||||||| |||||||||||    
T  30682902 acaacaaatggtgggaccccttcccggaccgtgcgtatgcgggagcttt-gtgcaccaagt 30682961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 33222995 - 33223051
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaa 74  Q
    ||||||||||||||| ||||||| |||||||  |||||| |||||||| ||||||||    
T  33222995 gtcatgtgactgaaaggtcacggatttaagtcatggaaacagcctcttgtgtaaaaa 33223051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 41440666 - 41440618
Alignment:
Q  103 aaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtg 151  Q
    ||||||||||||| |||||| |||| ||| |||||||||||||||||||    
T  41440666 aaaatggtggaaccccttcctagactctgtgtatgcgggagctttagtg 41440618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 155
Target Start/End: Original strand, 43768237 - 43768285
Alignment:
Q  107 tggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| || |||||||||||||||||||| ||||||||||| ||||||    
T  43768237 tggtgggaccccttcccagaccctgcgtatacgggagctttaatgcacc 43768285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 155
Target Start/End: Complemental strand, 4587626 - 4587575
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||| || ||||||| |||||||| ||||||||||||| ||||||||    
T  4587626 aaatggtgggaccccttcccggaccctgcctatgcgggagcttcagtgcacc 4587575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 23796560 - 23796611
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||  || |||||||||||||||| ||||| ||||||||||||||||    
T  23796560 aaatggtgagaccccttcccagaccctgcatatgctggagctttagtgcacc 23796611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 30555210 - 30555261
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||| || ||||| | ||||||||||||||| |||||||||||||||    
T  30555210 aaatggtgggaccccttcacggaccctgcgtatgcgagagctttagtgcacc 30555261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 155
Target Start/End: Original strand, 35019340 - 35019375
Alignment:
Q  120 tcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||||||||||||||||| |||||||||||||||    
T  35019340 tcccagaccctgcgtatgcgagagctttagtgcacc 35019375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 155
Target Start/End: Complemental strand, 45812600 - 45812549
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||| || |||||||| ||||||| |||||||||||| |||||||||    
T  45812600 aaatggtgggaccccttcccaaaccctgcatatgcgggagctctagtgcacc 45812549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 4430173 - 4430099
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgta 92  Q
    |||||||||||| || ||||||||||||||| ||| ||| ||  |||| ||||||||||  ||||||||| ||||    
T  4430173 gtcatgtgactggaaggtcacgggtttaagtcttgaaaacagtatcttgtgtaaaaaacagggtaagactgcgta 4430099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 50760373 - 50760291
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacac 100  Q
    ||||||||||||| | |||||||||| ||||  || ||| |||||||| |||| |||||| |||||| || ||||||| ||||    
T  50760373 gtcatgtgactgagaggtcacgggttcaagtcctgaaaacagcctcttgtgtataaaactgggtaaggctgcgtataatacac 50760291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 4e-31; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 10543686 - 10543823
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||||||||| ||||  ||||||  ||||||| ||||||||||  |||||| || |||| || |||| ||||||||||| || |    
T  10543686 gtcatgtgactgaaaggtcacgggttcaagtcctggaaacggcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccc 10543785  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||||||||||||||||||||||||||||||    
T  10543786 cttcccggaccctgcgtatgcgggagctttagtgcacc 10543823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 14530306 - 14530443
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||||||||| ||||  |||||| |||||||| | ||||||||  |||||| ||||||| || |||| || |||||||| || |    
T  14530306 gtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctacgtacaatacaccaataatggtgggaccc 14530405  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||||||||||||||||||||||||||||||    
T  14530406 cttcccggaccctgcgtatgcgggagctttagtgcacc 14530443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 24200772 - 24200635
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||||||||| ||||  |||||| |||||||| ||||||||||  |||||| || |||| || |||| ||||||||||| |  |    
T  24200772 gtcatgtgactgaaaagtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaacc 24200673  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| ||||||| ||||| | |||||||||||||||    
T  24200672 cttcccggaccctgagtatgtgagagctttagtgcacc 24200635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 11514424 - 11514558
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||| || |||||||||| || |  |||||| |||||||| |||||||||| | ||||| || |||| || |||| |||  |||||| || |    
T  11514424 gtcatgtgactggaaggtcacgggttcaactcctggaaacagcctcttgtgtaaaaaacaaagtaaggctgcgtacaatacaccaaa--tggtgggac-c 11514520  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11514521 cttcccagaccctgcgtatgcgggagctttagtgcacc 11514558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 31158588 - 31158451
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||| ||||| |||| ||  ||| ||||||||  |||||||||  ||||||| | | || || | || ||||||||||| || |    
T  31158588 gtcatgtgactgaaaggtcaagggttaaagtcttcaaaacagcctcttgcgtaaaaaacagggtaagattgcatacaataaaccaaaaatggtgggaccc 31158489  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  31158488 cttcccagaccctgcgtatgcgggagctttagtacacc 31158451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 8455463 - 8455328
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||| || |||||||||| ||||  |||||| |||||||| ||||||| ||  |||||| || |||| || |||| |||  |||||| || |    
T  8455463 gtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacacagggtaaggctgcgtacaatacaccaaa--tggtgggaccc 8455366  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  8455365 cttcccggaccctgcgtatgccggagctttagtgcacc 8455328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 7214522 - 7214660
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||| ||||| |||| ||||||| || ||||| ||||||| ||  |||||| || |||| || |||||||||||||||  |  |    
T  7214522 gtcatgtgactgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaatacagggtaaggctgcgtacaatacacaaaaaatggtgagatcc 7214621  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacca 156  Q
    |||| | ||| ||||||||||| ||| ||||||||||||    
T  7214622 cttctcggacactgcgtatgcgagagttttagtgcacca 7214660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 9671168 - 9671302
Alignment:
Q  18 gtcatgtgactg-aaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaact 116  Q
    |||||||||||| |||||||||||||| || |  |||||| |||||||| ||||||| |   |||||| || |||| || |||| |||  |||||| ||     
T  9671168 gtcatgtgactggaaatgtcacgggttcaaatcctggaaacagcctcttgtgtaaaacag--ggtaaggctgcgtacaatacaccaaa--tggtgggacc 9671263  T
Q  117 ccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  9671264 ccttcccggaccctgcgtatgcgggagctttagtgcacc 9671302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 10546153 - 10546286
Alignment:
Q  21 atgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgt-aaaaaactaggtaagactacgtataacacacaaaaaatggtggaactcct 119  Q
    |||||||||||| |||||||||| ||||  |||||| | |||||| | | |||||||  |||||| || |||| || ||||   ||||||||| || |||    
T  10546153 atgtgactgaaaggtcacgggttcaagtcctggaaacatcctcttgtataaaaaaacagggtaaggctgcgtacaatacac--caaatggtgggacccct 10546250  T
Q  120 tcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||| |||||||||||||||||||||||||||||||    
T  10546251 tcccggaccctgcgtatgcgggagctttagtgcacc 10546286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 14544051 - 14544193
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgta-aaaaactaggtaagactacgtataacacacaaaaaatggtggaact 116  Q
    ||||||||||||||| || || |||  | ||  |||||| |||||||| |||| ||||||  ||||||||| |||  || |  ||||||||||| | ||     
T  14544051 gtcatgtgactgaaaggttacaggtccaggtactggaaacagcctcttgtgtagaaaaacagggtaagactgcgtgcaataaccaaaaaatggtcggacc 14544150  T
Q  117 ccttcccagaccctgcgtatgcgggagctttagtgcaccaagt 159  Q
    ||||||  |||||||||||||||||||||||||||||||||||    
T  14544151 ccttccgggaccctgcgtatgcgggagctttagtgcaccaagt 14544193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 97 - 155
Target Start/End: Original strand, 23488548 - 23488606
Alignment:
Q  97 acacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||||||||||||| || ||||||| ||||||||||||||| |||||||||||||||    
T  23488548 acacaaaaaatggtgggaccccttcccggaccctgcgtatgcgagagctttagtgcacc 23488606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 27 - 156
Target Start/End: Complemental strand, 32781426 - 32781300
Alignment:
Q  27 ctgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttcccaga 126  Q
    |||||| |||||| ||| |||| | ||||| | |||||| ||||||||||  ||||||||| |||| || |||| |||  |||||| || ||||||||||    
T  32781426 ctgaaaggtcacgagttcaagtctcggaaacaacctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaa--tggtgggaccccttcccaga 32781329  T
Q  127 ccctgcgtatgcgggagctttagtgcacca 156  Q
    ||||| ||||||||||||||| ||||||||    
T  32781328 ccctgtgtatgcgggagcttt-gtgcacca 32781300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 156
Target Start/End: Original strand, 19614981 - 19615117
Alignment:
Q  19 tcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactcc 118  Q
    |||||||||||||| |||||||||| ||||  | |||| | |||||| | ||||||||  ||||||||| |||| || | || || ||| ||||| | ||    
T  19614981 tcatgtgactgaaaggtcacgggttcaagtccttgaaacatcctcttgtataaaaaacagggtaagactgcgtacaatataccaataatagtggacc-cc 19615079  T
Q  119 ttcccagaccctgcgtatgcgggagctttagtgcacca 156  Q
    |||||  ||||||||||||| |||||||||||||||||    
T  19615080 ttcccgaaccctgcgtatgcaggagctttagtgcacca 19615117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 155
Target Start/End: Complemental strand, 40762348 - 40762246
Alignment:
Q  51 tggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagt 150  Q
    |||||| |||||||| ||||||||||| |||||| ||||||| || |||| |||  |||||| || | ||||  ||||||||||||| ||||||||||||    
T  40762348 tggaaacagcctcttgtgtaaaaaactgggtaaggctacgtacaatacaccaaa--tggtgggaccctttcctggaccctgcgtatgtgggagctttagt 40762251  T
Q  151 gcacc 155  Q
    |||||    
T  40762250 gcacc 40762246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 14444800 - 14444852
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacca 156  Q
    ||||||||| || ||||||| ||||||||||||||||||||||||||||||||    
T  14444800 aaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcacca 14444852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 19185812 - 19185760
Alignment:
Q  98 cacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagt 150  Q
    |||||||||||||||||| ||||||  ||||||||||||||||||||||||||    
T  19185812 cacaaaaaatggtggaaccccttcctggaccctgcgtatgcgggagctttagt 19185760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 19977861 - 19977725
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactagg-taagactacgtataacacacaaaaaatggtggaact 116  Q
    |||||||||| |||| |||||||||| ||||| |||||| |||||||||||||||||| |||| ||||  | |||| || ||||   ||||||||| |      
T  19977861 gtcatgtgaccgaaaggtcacgggttcaagttctggaaacagcctcttttgtaaaaaa-taggataaggttgcgtacaatacac--caaatggtgggatc 19977765  T
Q  117 ccttcccagaccctgcgtatgcgggagctttagtgcacca 156  Q
    |||||||  ||| || ||||||||||||||||||||||||    
T  19977764 ccttcccgaaccttgtgtatgcgggagctttagtgcacca 19977725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 99410 - 99281
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||| |||||||||| |||||||||| ||||  | |||| ||||||||  |||||||||  || ||| || |||| || |||| |||  ||||||||| |    
T  99410 gtcacgtgactgaaaggtcacgggttcaagtcctagaaacagcctctt--gtaaaaaacatggcaaggctgcgtacaatacaccaaa--tggtggaaccc 99315  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtg 151  Q
    |||| ||||||||| |||||||||||||||||||    
T  99314 cttctcagaccctgtgtatgcgggagctttagtg 99281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 44643595 - 44643646
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||| || |||||||||||||||||||||||||||| ||||||||||    
T  44643595 aaatggtgggaccccttcccagaccctgcgtatgcgggagccttagtgcacc 44643646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 17667990 - 17668125
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||| || |||||||||| ||||  |||||| | |||||| |||||||| |  |||||| || |||| || |||| |||  ||||||||| |    
T  17667990 gtcatgtgactggaaggtcacgggttcaagtcctggaaagaacctcttgtgtaaaaatcagggtaaggctgcgtacaatacaccaaa--tggtggaaccc 17668087  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||| |  |||||||||||  |||||||||||||||||    
T  17668088 cttctcgaaccctgcgtatatgggagctttagtgcacc 17668125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 45235964 - 45235825
Alignment:
Q  19 tcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactagg-taagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||  ||||| ||| ||||  | |||| || ||||| ||||||| | |||| |||| |||||| ||| ||||||||  |||||| || |    
T  45235964 tcatgtgactgaaagatcacgagttcaagtcctagaaacagtctcttctgtaaaataatagggtaaggctacgtgtaatacacaaaa--tggtgggaccc 45235867  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcaccaagt 159  Q
    ||| ||||||||| ||||||| |||||||||||| |||||||    
T  45235866 cttaccagaccctacgtatgcaggagctttagtgtaccaagt 45235825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 5841016 - 5841153
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||| || |||||||||| ||||  | |||| ||||| || |||||||||   ||||||  | |||| || |||  || |||||||| || |    
T  5841016 gtcatgtgactggaaggtcacgggttcaagtcctagaaacagccttttgtgtaaaaaatagggtaaggatgcgtacaatacatcaataatggtgggaccc 5841115  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| ||||| || ||||||||||||||||||||||    
T  5841116 cttcccggaccccgcatatgcgggagctttagtgcacc 5841153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 30826108 - 30826159
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacca 156  Q
    |||||||||||| |||||||||||||| | |||||||||||||||||||||||    
T  30826108 aaatggtggaac-ccttcccagaccctacatatgcgggagctttagtgcacca 30826159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 21779406 - 21779273
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||||||||| ||||  |||| | |||||||| ||||||| |   ||||||  | |||| || |||| |||  |||||| || |    
T  21779406 gtcatgtgactgaaaggtcacgggttcaagtcctggagacagcctcttgtgtaaaacag--ggtaaggttgcgtacaatacaccaaa--tggtgggaccc 21779311  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||||||| |||||||||||| |||||||||    
T  21779310 cttcccggaccctgcatatgcgggagctctagtgcacc 21779273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 23397754 - 23397887
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||| ||||| ||||  |||||| |||||||| ||||||| |   |||||| ||||||| || ||||   ||||||||| || |    
T  23397754 gtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaata--gggtaaggctacgtacaatacac--caaatggtgggaccc 23397849  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||| | |||||| | |||||||||||| |||||||||    
T  23397850 cttctcggaccctacatatgcgggagctctagtgcacc 23397887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 155
Target Start/End: Complemental strand, 24860051 - 24860000
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||| |||| ||||| | |||||||||||||||||||||||||||||||    
T  24860051 aaatggtagaaccccttctcggaccctgcgtatgcgggagctttagtgcacc 24860000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 25079865 - 25079729
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaa-ctaggtaagactacgtataacacacaaaaaatggtggaact 116  Q
    |||||||||||| || |||||||||| |||| || |||| | |||||| ||||||||| | |||||||  | |||| || ||||  ||  |||||| ||     
T  25079865 gtcatgtgactggaaggtcacgggttcaagtcttagaaacaacctcttgtgtaaaaaaacaaggtaaggatgcgtacaatacaccgaa--tggtgggacc 25079768  T
Q  117 ccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||| ||||||||||||||  |||||||||||||||    
T  25079767 ccttcccggaccctgcgtatgcaagagctttagtgcacc 25079729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 12024065 - 12023931
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||||||||| ||||  |||||| |||||||| ||| ||||||  |||||| || |||| || ||||   ||||||||| || |    
T  12024065 gtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggtaaggctgcgtacaatacac--caaatggtgggaccc 12023969  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    | |||| ||||||||||||  || ||||||| ||||||    
T  12023968 cctcccggaccctgcgtatttggaagctttaatgcacc 12023931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 31523303 - 31523353
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcac 154  Q
    |||||||||||| | |||||| ||||||| |||||||||||||||||||||    
T  31523303 aaatggtggaaccctttcccaaaccctgcatatgcgggagctttagtgcac 31523353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 153
Target Start/End: Original strand, 34766330 - 34766376
Alignment:
Q  107 tggtggaactccttcccagaccctgcgtatgcgggagctttagtgca 153  Q
    |||||| || ||||||| |||||||||||||||||||||||||||||    
T  34766330 tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgca 34766376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 40579810 - 40579761
Alignment:
Q  106 atggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||| || ||||||| ||||||| |||||||||||||||||||||||    
T  40579810 atggtgggaccccttcccggaccctgagtatgcgggagctttagtgcacc 40579761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 155
Target Start/End: Complemental strand, 124962 - 124926
Alignment:
Q  119 ttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||| |||||||||||||||||||||||||||||||    
T  124962 ttcccggaccctgcgtatgcgggagctttagtgcacc 124926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 155
Target Start/End: Original strand, 22371199 - 22371235
Alignment:
Q  119 ttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||| |||||||||||||||||||||||||||||||    
T  22371199 ttcccggaccctgcgtatgcgggagctttagtgcacc 22371235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 156
Target Start/End: Original strand, 8575980 - 8576019
Alignment:
Q  117 ccttcccagaccctgcgtatgcgggagctttagtgcacca 156  Q
    ||||||| ||||||||||||| ||||||||||||||||||    
T  8575980 ccttcccggaccctgcgtatgtgggagctttagtgcacca 8576019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 24890486 - 24890533
Alignment:
Q  107 tggtggaactccttcccagaccctgcgtatgcgggagctttagtgcac 154  Q
    |||||| || ||||||| |||||||||||||| |||||||||||||||    
T  24890486 tggtgggaccccttcccggaccctgcgtatgcaggagctttagtgcac 24890533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 36871564 - 36871614
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||| || ||||||| |||| ||||||||||||||||||||||||||    
T  36871564 aaatggtgggaccccttcccggacc-tgcgtatgcgggagctttagtgcacc 36871614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 17623552 - 17623686
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||| ||||| || |||||||||| ||||  | |||| | |||||| |||||||| |  |||||| || |||| || |||| |||  ||||||||| |    
T  17623552 gtcatgcgactggaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaaaatcagggtaaggctgcgtacaatacaccaaa--tggtggaaccc 17623649  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcac 154  Q
    ||||||  | |||||||||| || |||||||||||||    
T  17623650 cttcccgaatcctgcgtatgtggaagctttagtgcac 17623686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 17896332 - 17896381
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgca 153  Q
    ||||||||| || ||||| | ||||||||||||| |||||||||||||||    
T  17896332 aaatggtgggaccccttctcggaccctgcgtatgtgggagctttagtgca 17896381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 147
Target Start/End: Original strand, 33795359 - 33795400
Alignment:
Q  106 atggtggaactccttcccagaccctgcgtatgcgggagcttt 147  Q
    ||||||| || ||||||||||||||| |||||||||||||||    
T  33795359 atggtgggaccccttcccagaccctgtgtatgcgggagcttt 33795400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 41409936 - 41409985
Alignment:
Q  106 atggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||| || ||||||| |||||||| ||||||||||||| ||||||||    
T  41409936 atggtgggaccccttcccggaccctgcatatgcgggagcttcagtgcacc 41409985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 2e-29; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 12222064 - 12221926
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||||||||| |||| ||||||| |||||||| ||||||||||  |||||| || |||| || |||| || |||||||| || |    
T  12222064 gtcatgtgactgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccc 12221965  T
Q  118 cttcccagaccctgcgtatgcgggagc-tttagtgcacc 155  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  12221964 cttcccggaccctgcgtatgcgggagcttttagtgcacc 12221926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 29356004 - 29355867
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||||||||| ||||  |||||| |||||||| ||||| ||||  |||||| || |||| || |||| || |||||||| || |    
T  29356004 gtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggctgcgtacaatacaccaataatggtgggaccc 29355905  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||||||||||||||||||||||||||||||    
T  29355904 cttcccggaccctgcgtatgcgggagctttagtgcacc 29355867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 97 - 155
Target Start/End: Original strand, 12885978 - 12886036
Alignment:
Q  97 acacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||    
T  12885978 acacaaaaaatggtgggaccccttcccagaccctgcgtatgtgggagctttagtgcacc 12886036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 9161111 - 9161248
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| ||||| |||| ||||  |||||| |||||||| ||||||||   || |||| || |||| || |||  || |||||||| || |    
T  9161111 gtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaacagag-taaggctgcgtacaatacatcaataatggtgggaccc 9161209  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacca 156  Q
    |||| | |||||||||||||||| |||||||||||||||    
T  9161210 cttctcggaccctgcgtatgcggaagctttagtgcacca 9161248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 1346952 - 1347085
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||||||||| ||||  |||||| |||| ||| ||||||| |   |||||| || |||| || |||| |||  |||||| || |    
T  1346952 gtcatgtgactgaaaggtcacgggttcaagtcctggaaacagccacttgtgtaaaacag--ggtaaggctgcgtacaatacaccaaa--tggtgggaccc 1347047  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||||||| |||||||||||| |||||||||    
T  1347048 cttcccggaccctgcatatgcgggagctctagtgcacc 1347085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 1354902 - 1354769
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| ||||| |||| ||||  |||||| |||||||| ||||||| |   |||||| || |||| || |||| |||  |||||| || |    
T  1354902 gtcatgtgactgaaaggtcactggttcaagtcctggaaacagcctcttgtgtaaaacag--ggtaaggctgcgtacaatacaccaaa--tggtgggaccc 1354807  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||||||| |||||||||||| |||||||||    
T  1354806 cttcccggaccctgcatatgcgggagctctagtgcacc 1354769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 3815224 - 3815089
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||||||||||||||||| ||||  |||||| || || || |||||||||   |||| |||| |||| || ||||   ||||||||| || |    
T  3815224 gtcatgtgactgaaatgtcacgggttcaagtcctggaaacagactattgtgtaaaaaatatggtacgactgcgtacaatacac--caaatggtgggaccc 3815127  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
     |||||  ||||| ||||||||| ||||||||||||||    
T  3815126 tttcccgaaccctacgtatgcggaagctttagtgcacc 3815089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 145
Target Start/End: Original strand, 14553500 - 14553626
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||| ||| ||||| |||| ||||  |||||||||| |||| |||||||||   |||||| ||  |||||| |||| |||| |||||| || |    
T  14553500 gtcatgtgact-aaaggtcacaggttcaagtcctggaaatagcttcttgtgtaaaaaatagggtaaggctgtgtataatacaccaaaactggtgggaccc 14553598  T
Q  118 cttcccagaccctgcgtatgcgggagct 145  Q
    ||||  |||||||| |||||||||||||    
T  14553599 cttcgtagaccctgtgtatgcgggagct 14553626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 32728303 - 32728168
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| ||||| | || |||||||||||| | |||||| ||||||||||  |||||||||  ||| || | ||   |||| ||||  | |    
T  32728303 gtcatgtgactgaaaggtcacagattcaagttttggaaacaacctcttatgtaaaaaacagggtaagactgtgtacaatatac--caaatagtgg-tccc 32728207  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacca 156  Q
     |||||||||||| ||||||||||| |||||||||||||    
T  32728206 tttcccagaccctacgtatgcgggaactttagtgcacca 32728168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 2166556 - 2166422
Alignment:
Q  21 atgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactcctt 120  Q
    |||||||||||| |||||||||| ||||  |||||| | |||||| ||||||| ||  | ||||  | |||| || |||| || |||||||| || ||||    
T  2166556 atgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggataaggttgcgtacaatacaccaataatggtgggacccctt 2166457  T
Q  121 cccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||| ||||||   ||| ||||||||||||||||||    
T  2166456 cccggaccctatatattcgggagctttagtgcacc 2166422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 2178189 - 2178055
Alignment:
Q  21 atgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactcctt 120  Q
    |||||||||||| |||||||||| ||||  |||||| | |||||| ||||||| ||  | ||||  | |||| || |||| || |||||||| || ||||    
T  2178189 atgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggataaggttgcgtacaatacaccaataatggtgggacccctt 2178090  T
Q  121 cccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||| ||||||   ||| ||||||||||||||||||    
T  2178089 cccggaccctatatattcgggagctttagtgcacc 2178055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 155
Target Start/End: Original strand, 6808468 - 6808518
Alignment:
Q  105 aatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||||| || ||||||| ||||||| |||||||||||||||||||||||    
T  6808468 aatggtgggaccccttcccggaccctgtgtatgcgggagctttagtgcacc 6808518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 155
Target Start/End: Original strand, 12892066 - 12892132
Alignment:
Q  89 cgtataacacacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||| |||| || |||||||| || ||||||| ||||| || ||||||||||||||||||||||    
T  12892066 cgtataatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcacc 12892132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 32579497 - 32579543
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagt 150  Q
    ||||||||| || |||||||||||||||| |||||||||||||||||    
T  32579497 aaatggtgggaccccttcccagaccctgcatatgcgggagctttagt 32579543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 13267797 - 13267848
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||| || ||||||  |||||||||||||||||||||| ||||||||    
T  13267797 aaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcacc 13267848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 24097649 - 24097696
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtg 151  Q
    ||||||||| || ||||||| |||||||||||||||| ||||||||||    
T  24097649 aaatggtgggaccccttcccggaccctgcgtatgcggaagctttagtg 24097696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 148
Target Start/End: Complemental strand, 29016332 - 29016301
Alignment:
Q  117 ccttcccagaccctgcgtatgcgggagcttta 148  Q
    ||||||||||||||||||||||||||||||||    
T  29016332 ccttcccagaccctgcgtatgcgggagcttta 29016301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 155
Target Start/End: Complemental strand, 3116199 - 3116141
Alignment:
Q  97 acacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||| ||||||||||| || ||||| | |||| ||||||||||||||||||||| ||||    
T  3116199 acaccaaaaatggtgggaccccttctcggaccttgcgtatgcgggagctttagtacacc 3116141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 155
Target Start/End: Complemental strand, 10734955 - 10734917
Alignment:
Q  117 ccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  10734955 ccttcccggaccctgcgtatgcgggagctttagtccacc 10734917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 20400655 - 20400729
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgta 92  Q
    ||||||||||||||| ||||| |||| ||||| |||||| |  ||||| ||||||||||  ||||||||| ||||    
T  20400655 gtcatgtgactgaaaggtcacaggttcaagttatggaaacaatctcttgtgtaaaaaacagggtaagactgcgta 20400729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 159
Target Start/End: Complemental strand, 20906836 - 20906794
Alignment:
Q  117 ccttcccagaccctgcgtatgcgggagctttagtgcaccaagt 159  Q
    ||||||||||||| || |||||||||||||||||| |||||||    
T  20906836 ccttcccagaccccgcatatgcgggagctttagtgaaccaagt 20906794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 23930188 - 23930139
Alignment:
Q  106 atggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||| || ||||| | |||||||| ||||||||||||||||||||||    
T  23930188 atggtgggaccccttcacggaccctgcttatgcgggagctttagtgcacc 23930139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 1e-28; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 38879569 - 38879706
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||||||||| ||||  |||||| |||||||| | ||||||||  |||||| || |||| || |||| || |||||||| || |    
T  38879569 gtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccc 38879668  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||||||||||||||||||||||||||||||    
T  38879669 cttcccggaccctgcgtatgcgggagctttagtgcacc 38879706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 4619253 - 4619116
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||| || |||||||||| ||||  ||||||||||||||| ||||||||||  |||||| || |||| || |||| || |||||||| || |    
T  4619253 gtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccc 4619154  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| ||||| || |||||| |||||||||||||||    
T  4619153 cttcccggaccccgcatatgcgagagctttagtgcacc 4619116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 43334190 - 43334327
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgt-aaaaaactaggtaagactacgtataacacacaaaaaatggtggaact 116  Q
    ||||||||||||||| |||||||||| ||||  |||||| |||||| | ||| |||||||  |||||| || |||| || |||| ||||||||||| ||     
T  43334190 gtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggacc 43334289  T
Q  117 ccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||| ||||||||| |||||||||||||||||||||    
T  43334290 ccttcccggaccctgcg-atgcgggagctttagtgcacc 43334327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 27328740 - 27328875
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| ||||| |||| ||||  |||||| || ||||| ||||||||||  |||||| || |||| || |||| || |||||||| || |    
T  27328740 gtcatgtgactgaaaggtcacaggttcaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccc 27328839  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgca 153  Q
    ||||||  ||||||||||||||||||||||| ||||    
T  27328840 cttcccgaaccctgcgtatgcgggagctttaatgca 27328875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 12006477 - 12006340
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||||||| || |  | |||||| | |||||| |||||||||   |||||| || | || || |||| || |||||||| || |    
T  12006477 gtcatgtgactgaaaggtcacggggttcaagtctggaaacaacctcttatgtaaaaaatagggtaaggctccatacaatacaccaataatggtgggaccc 12006378  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  12006377 cttcccagaccctgcctatgcgggagctttagtgcacc 12006340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 24448878 - 24449013
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||| || |||||||||| ||||  |||||| ||||| || |||||||||   |||||| || |||| || |||| |||  |||||| || |    
T  24448878 gtcatgtgactggaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatagggtaaggctgcgtacaatacaccaaa--tggtgggaccc 24448975  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  24448976 cttcccggaccctgcgtatgcaggagctttagtgcacc 24449013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 32703412 - 32703545
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||||||||| ||||  |||||| |||||||| |||  |||||  |||||| || |||| || ||||   ||||||||| || |    
T  32703412 gtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctgcgtacaatacac--caaatggtgggaccc 32703507  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||||||| |||||||||||| |||||||||    
T  32703508 cttcccggaccctgcatatgcgggagctctagtgcacc 32703545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 16957386 - 16957437
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||| || ||||||| |||||||||||||||||||||||||||||||    
T  16957386 aaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcacc 16957437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 22187273 - 22187408
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||| ||||||||| ||||| |||||||||  |||||| |||||||| ||||||||||  | ||||||| |||| || |||| |||||   ||  || |    
T  22187273 gtcatttgactgaaaggtcaccggtttaagtcctggaaacagcctcttgtgtaaaaaacatgataagactgcgtacaatacaccaaaaacaatgagaccc 22187372  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgca 153  Q
    ||||||| ||||| | ||||| ||||||||||||||    
T  22187373 cttcccaaaccctacatatgcaggagctttagtgca 22187408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 155
Target Start/End: Original strand, 25622533 - 25622583
Alignment:
Q  105 aatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||||| || ||||||| |||||||||||||||||||||||||||||||    
T  25622533 aatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcacc 25622583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 41014307 - 41014441
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||| || |||||||||| ||||  |||||| |||||||| ||| ||||||  |||||| || |||| || ||||   ||||||||| || |    
T  41014307 gtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggtaaggctgcgtacaatacac--caaatggtgggaccc 41014403  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||  ||||| || ||||||||||||||||||||||    
T  41014404 cttcctggaccccgcatatgcgggagctttagtgcacc 41014441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 13801876 - 13801779
Alignment:
Q  58 agcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||||| ||||||||||  |||||| || |||| || |||| || |||||||| || ||||||| ||||| || |||||| |||||||||||||||    
T  13801876 agcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgagagctttagtgcacc 13801779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 155
Target Start/End: Original strand, 39801591 - 39801639
Alignment:
Q  107 tggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| || |||||||||||||| ||||||||||||||||||||||||    
T  39801591 tggtgggaccccttcccagaccctacgtatgcgggagctttagtgcacc 39801639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 155
Target Start/End: Complemental strand, 42924977 - 42924842
Alignment:
Q  22 tgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttc 121  Q
    ||||||||||| |||||| ||| ||||  || ||| | | |||| ||||||||||  ||||||  | |||| || |||| ||||||| |||||  |||||    
T  42924977 tgtgactgaaaggtcacgagttcaagtcctgaaaacaacatcttgtgtaaaaaacagggtaaggttgcgtacaatacaccaaaaatgatggaatcccttc 42924878  T
Q  122 ccagac--cctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||  ||||||||||||| ||||||||||||||    
T  42924877 ccagacaccctgcgtatgcggaagctttagtgcacc 42924842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 43574678 - 43574729
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||| || ||||||| ||||||||||||||||||||||||| |||||    
T  43574678 aaatggtgggaccccttcccggaccctgcgtatgcgggagctttagagcacc 43574729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 28516581 - 28516444
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||| ||| |||||| |||||||||| |||| ||||||| | |||||| ||||||||||  | || | || |||| || |||  |||| |||||| || |    
T  28516581 gtcaggtggctgaaaggtcacgggttcaagtcttggaaacatcctcttgtgtaaaaaacaggctagggctgcgtacaatacatcaaaa-tggtgggaccc 28516483  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacca 156  Q
     ||||||||||||||| |||| |||||||||||| ||||    
T  28516482 attcccagaccctgcgcatgcaggagctttagtggacca 28516444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 156
Target Start/End: Complemental strand, 31694161 - 31694119
Alignment:
Q  114 actccttcccagaccctgcgtatgcgggagctttagtgcacca 156  Q
    ||||||||||||||| |||||||||||||| ||||||||||||    
T  31694161 actccttcccagaccttgcgtatgcgggagatttagtgcacca 31694119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 148
Target Start/End: Complemental strand, 10306538 - 10306493
Alignment:
Q  103 aaaatggtggaactccttcccagaccctgcgtatgcgggagcttta 148  Q
    |||||||||| || ||||||| ||||||||||||||||||||||||    
T  10306538 aaaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 10306493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 18684361 - 18684394
Alignment:
Q  120 tcccagaccctgcgtatgcgggagctttagtgca 153  Q
    ||||||||||||||||||||||||||||||||||    
T  18684361 tcccagaccctgcgtatgcgggagctttagtgca 18684394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 7097823 - 7097771
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacca 156  Q
    ||||||||  || |||||||  |||||||||||||||||||||||||||||||    
T  7097823 aaatggtgagaccccttcccgaaccctgcgtatgcgggagctttagtgcacca 7097771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 155
Target Start/End: Complemental strand, 21784396 - 21784344
Alignment:
Q  103 aaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||||||| || |||| || ||||||||||||||||||| |||||||||||    
T  21784396 aaaatggtgggacccctttccggaccctgcgtatgcgggaggtttagtgcacc 21784344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 155
Target Start/End: Original strand, 29334416 - 29334519
Alignment:
Q  51 tggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagt 150  Q
    |||||| |||||||| |||||||||| ||||||| || |||| || |||| | || |||||| || | ||||| ||||||||||||| |||| ||||| |    
T  29334416 tggaaacagcctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccagaa-tggtgggacccattcccggaccctgcgtatgtgggatctttaat 29334514  T
Q  151 gcacc 155  Q
    |||||    
T  29334515 gcacc 29334519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 37024701 - 37024646
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaa 73  Q
    ||||||||||||||| |||||||||| ||||  |||||| |||||||| |||||||    
T  37024701 gtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 37024646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 153
Target Start/End: Complemental strand, 5873382 - 5873336
Alignment:
Q  107 tggtggaactccttcccagaccctgcgtatgcgggagctttagtgca 153  Q
    |||||| |||||| ||| ||| |||||||||||||||||||||||||    
T  5873382 tggtgggactcctccccggacactgcgtatgcgggagctttagtgca 5873336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 155
Target Start/End: Original strand, 13774958 - 13774988
Alignment:
Q  125 gaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||||||||||||||||||||||||||||    
T  13774958 gaccctgcgtatgcgggagctttagtgcacc 13774988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 16880754 - 16880659
Alignment:
Q  58 agcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||||| ||||||||||  |||||| || |||| || |||| |||  |||||  ||  |||||| |||| ||||||||||||||||||||||||||    
T  16880754 agcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaa--tggtgtgaccacttcccggaccatgcgtatgcgggagctttagtgcacc 16880659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 19143006 - 19142956
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcac 154  Q
    ||||||||| || ||||||| |||| |||||||||||||| ||||||||||    
T  19143006 aaatggtgggaccccttcccggaccatgcgtatgcgggagatttagtgcac 19142956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 155
Target Start/End: Original strand, 32354212 - 32354250
Alignment:
Q  117 ccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||| ||||||| |||||||||||||||||||||||    
T  32354212 ccttcccggaccctgtgtatgcgggagctttagtgcacc 32354250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 29184114 - 29184073
Alignment:
Q  114 actccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||||  |||||| ||||||||||||||||||||||||||    
T  29184114 actccttgtcagaccatgcgtatgcgggagctttagtgcacc 29184073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 1e-28; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 16408750 - 16408613
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||| || |||||||||| ||||  |||||| |||||||| ||||||||||  ||||||||| |||| || |||| || ||||||||||| |    
T  16408750 gtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaataatggtggaaccc 16408651  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| ||||| || ||||||||||||||||||||||    
T  16408650 cttcccggaccccgcatatgcgggagctttagtgcacc 16408613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 54730237 - 54730375
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactagg-taagactacgtataacacacaaaaaatggtggaact 116  Q
    ||||||||||  ||| |||||||||| ||||  | |||| |||||||| ||||||||| |||| |||| || ||||||| |||| || |||| ||||||     
T  54730237 gtcatgtgaccaaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaaaataggataaggctgcgtataatacaccaataatgatggaacc 54730336  T
Q  117 ccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  54730337 ccttcccggaccctgcgtatgcgggagctttagtgcacc 54730375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 44363279 - 44363142
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||||| ||| ||||  || ||| |||||| | ||||||||||  |||| | || |||| ||| ||| ||||||||||| || |    
T  44363279 gtcatgtgactgaaaggtcacgagttcaagtcctgaaaacagcctcgtgtgtaaaaaacagggtagggctgcgtacaacgcaccaaaaatggtgggaccc 44363180  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||||||||||||||||||||||||||||||    
T  44363179 cttcccggaccctgcgtatgcgggagctttagtgcacc 44363142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 21646952 - 21647089
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||| || ||||| |||| ||||  |||||| |||||||| |||||||||   |||||| || |||| || | || || |||||||| || |    
T  21646952 gtcatgtgactggaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaaatagggtaaggctgcgtacaatataccaataatggtgggaccc 21647051  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||||||||| || ||||||||||||||||||||||    
T  21647052 cttcccagaccccgcatatgcgggagctttagtgcacc 21647089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 51 - 155
Target Start/End: Complemental strand, 20639773 - 20639670
Alignment:
Q  51 tggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagt 150  Q
    |||||| |||||||| ||||||||||  |||||| || |||| || |||| |||| |||||| || ||||||| ||||||||||||||||||||||||||    
T  20639773 tggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaa-tggtgggaccccttcccggaccctgcgtatgcgggagctttagt 20639675  T
Q  151 gcacc 155  Q
    |||||    
T  20639674 gcacc 20639670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 25463110 - 25463245
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||||||||| ||||  |||||| | |||||| ||||||||||| || |||  | |||| |||||||   ||||||||| || |    
T  25463110 gtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaactgggaaaggttgcgtacaacacac--caaatggtgggaccc 25463207  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacca 156  Q
    |||||| |||||||| |||||||||||||| ||||||||    
T  25463208 cttcccggaccctgcatatgcgggagcttt-gtgcacca 25463245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 6430772 - 6430638
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||||||||| ||||  |||||| |||||||| |||||||| |  |||||| || |||| || |||| |||  |||||| ||      
T  6430772 gtcatgtgactgaaaggtcacgggttcaagtcatggaaacagcctcttgtgtaaaaa-cagggtaaggctgcgtacaatacaccaaa--tggtgggacca 6430676  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  6430675 cttcccggaccctgcgtatgcgggagctttagcgcacc 6430638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 35567158 - 35567293
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||| ||||||| |||| ||||| |||| ||||||| |||| ||| ||||||||||  |||||| ||  ||| ||||||| |||  |||||| || |    
T  35567158 gtcatgtaactgaaaggtcatgggttcaagtcttggaaacagccacttgtgtaaaaaacagggtaaggctgtgtacaacacaccaaa--tggtgggaccc 35567255  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||  ||||||||| ||||||||||||||||||||    
T  35567256 cttcccgaaccctgcgtctgcgggagctttagtgcacc 35567293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 5648247 - 5648380
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||| || |||||||||| ||||  |||||| |||||||| |||||||| |  |||||| || |||| || |||| |||  |||||| || |    
T  5648247 gtcatgtgactgtaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa-cagggtaaggctgcgtacaatacaccaaa--tggtgggaccc 5648343  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcac 154  Q
    |||||| |||||||||||||||||||||| |||||||    
T  5648344 cttcccggaccctgcgtatgcgggagcttcagtgcac 5648380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 16911550 - 16911682
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||| ||| |||||||||| ||||  | |||| |||||||| |||| ||| |  |||||| || |||| || |||| || |||||||| || |    
T  16911550 gtcatgtgacttaaaggtcacgggttcaagtcctagaaacagcctcttgtgtacaaatcagggtaaggctgcgtacaatacaccaataatggtgggaccc 16911649  T
Q  118 cttcccagaccctgcgtatgcgggagctttagt 150  Q
    |||||| ||||||||||| ||||||||||||||    
T  16911650 cttcccggaccctgcgtacgcgggagctttagt 16911682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 23501781 - 23501912
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||||||||| ||||       | |||||||| ||||||||||  ||||||  | |||| || |||| || |||||||| || |    
T  23501781 gtcatgtgactgaaaggtcacgggttcaagtc------acagcctcttgtgtaaaaaacagggtaaggttgcgtacaatacaccaataatggtgggaccc 23501874  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  23501875 cttcccggaccctgcatatgcgggagctttagtgcacc 23501912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 40915817 - 40915951
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||  || |||||||||| ||||  |||||| |||||||| |||||||| | ||||||| || |||| || |||| |||  |||||| |  |    
T  40915817 gtcatgtgactataaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa-caaggtaaggctgcgtacaatacaccaaa--tggtgggagcc 40915913  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||||||||||||||||||||| ||||||||    
T  40915914 cttcccggaccctgcgtatgcgggagcttcagtgcacc 40915951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 11054293 - 11054160
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||||||||| ||||  || ||| || ||||| ||||||| |   ||||||||| |||| || |||| |||  ||| ||||| |    
T  11054293 gtcatgtgactgaaaggtcacgggttcaagtcctgaaaacagtctcttgtgtaaaacag--ggtaagactgcgtacaatacaccaaa--tggcggaaccc 11054198  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||||||| |||||||||||| |||||||||    
T  11054197 cttcccggaccctgcatatgcgggagctctagtgcacc 11054160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 148
Target Start/End: Complemental strand, 17043541 - 17043413
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||| |||||||||| ||||| |||| ||||  |||||| |||||||| ||||||| ||  |||||| || |||| || |||| |||  |||||| || |    
T  17043541 gtcaagtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaatacagggtaaggctgcgtacaatacaccaaa--tggtgggaccc 17043444  T
Q  118 cttcccagaccctgcgtatgcgggagcttta 148  Q
    ||||||||||||||| ||||| |||||||||    
T  17043443 cttcccagaccctgcatatgctggagcttta 17043413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 155
Target Start/End: Complemental strand, 29208039 - 29207910
Alignment:
Q  22 tgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttc 121  Q
    ||||||||||| |||||||||| ||||  ||||||| ||||||| ||||||| |   |||||| || |||| || |||| |||  |||||| || |||||    
T  29208039 tgtgactgaaaggtcacgggttcaagtcctggaaattgcctcttgtgtaaaacag--ggtaaggctgcgtacaatacaccaaa--tggtgggaccccttc 29207944  T
Q  122 ccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    || |||||||| |||||||||||| |||||||||    
T  29207943 ccggaccctgcatatgcgggagctctagtgcacc 29207910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 54175051 - 54175188
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaat-agcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaact 116  Q
    ||||||||||||||||||||||| || ||||  ||||||  |||||||| |||||||| |  |||||| || |||| || |||| |||| |||||| ||     
T  54175051 gtcatgtgactgaaatgtcacggattcaagtcctggaaaacagcctcttgtgtaaaaa-cagggtaaggctgcgtacaatacaccaaaa-tggtgggacc 54175148  T
Q  117 ccttcccag-accctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||| | ||||||| ||||||||||||||||||||||    
T  54175149 ccttccccggaccctgcatatgcgggagctttagtgcacc 54175188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 19027836 - 19027971
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||| |||||||||| |||||||||| ||||  |||||| | | |||| ||||||||||  |||||| || |||| || |||| ||   |||||| || |    
T  19027836 gtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacatcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaat--tggtgggaccc 19027933  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||| |||||| ||||||||| |||||||||||||||||    
T  19027934 ctttccagactctgcgtatgtgggagctttagtgcacc 19027971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 155
Target Start/End: Complemental strand, 30352650 - 30352592
Alignment:
Q  97 acacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||| ||||||||||| || ||||| | |||||||||||||||||||||||||||||||    
T  30352650 acaccaaaaatggtgggaccccttctcggaccctgcgtatgcgggagctttagtgcacc 30352592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 155
Target Start/End: Complemental strand, 38755970 - 38755920
Alignment:
Q  105 aatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||||| || ||||||| |||||||||||||||||||||||||||||||    
T  38755970 aatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcacc 38755920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 20908785 - 20908649
Alignment:
Q  18 gtcatgtgactgaaa-tgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaact 116  Q
    ||||||||||||||| ||| ||  ||| ||||  |||||| | | |||||| |||||||  ||||||| || |||| || |||| |||| |||||| ||     
T  20908785 gtcatgtgactgaaaatgttacatgttcaagtcatggaaacatcgtcttttctaaaaaagaaggtaaggctgcgtacaatacaccaaaa-tggtgggacc 20908687  T
Q  117 ccttcccagaccctgcgtatgcgggagctttagtgcac 154  Q
    |||||||  |||||||||||||||||||||||||||||    
T  20908686 ccttcccgaaccctgcgtatgcgggagctttagtgcac 20908649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 30690236 - 30690187
Alignment:
Q  107 tggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacca 156  Q
    |||||| || ||||||| ||||||||||||||||||||||||||||||||    
T  30690236 tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcacca 30690187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 14983906 - 14983958
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacca 156  Q
    ||||||||| || ||||||| ||||||||||||||||||||||||||| ||||    
T  14983906 aaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgtacca 14983958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 33836549 - 33836501
Alignment:
Q  105 aatggtggaactccttcccagaccctgcgtatgcgggagctttagtgca 153  Q
    |||||||| || ||||||| |||||||||||||||||||||||||||||    
T  33836549 aatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgca 33836501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 11394924 - 11394975
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||| || |||| || |||||||||||||||||||||||||||||||    
T  11394924 aaatggtgggacccctttccggaccctgcgtatgcgggagctttagtgcacc 11394975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 11404651 - 11404702
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||| || |||| || |||||||||||||||||||||||||||||||    
T  11404651 aaatggtgggacccctttccggaccctgcgtatgcgggagctttagtgcacc 11404702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 20224972 - 20225105
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||| ||||| ||||  |||||| | |||||| ||||||| |   |||||| || |||| || |||| |||  |||||| || |    
T  20224972 gtcatgtgactgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaacag--ggtaaggctgcgtacaatacaccaaa--tggtgggaccc 20225067  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||||||| |||||||||||| |||||||||    
T  20225068 cttcccggaccctgcatatgcgggagctctagtgcacc 20225105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 149
Target Start/End: Original strand, 44718641 - 44718684
Alignment:
Q  106 atggtggaactccttcccagaccctgcgtatgcgggagctttag 149  Q
    ||||||| || |||||||||||||||||||||||||||||||||    
T  44718641 atggtgggaccccttcccagaccctgcgtatgcgggagctttag 44718684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 153
Target Start/End: Complemental strand, 47482915 - 47482864
Alignment:
Q  102 aaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgca 153  Q
    ||||||||||| || ||||||| ||||||||||||||||||||||| |||||    
T  47482915 aaaaatggtgggaccccttcccggaccctgcgtatgcgggagctttggtgca 47482864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 48598970 - 48598837
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||||||||| ||||  |||||| |||||||| |||  |||||  |||||| || |||| || ||||   ||||||||| || |    
T  48598970 gtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctgcgtacaatacac--caaatggtgggaccc 48598875  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||| ||| ||||| |||||| |||||||||    
T  48598874 cttcccggaccatgcatatgccggagctctagtgcacc 48598837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 487282 - 487138
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaa-------atggt 110  Q
    ||||||||||||||| |||||||||| |||| ||||||| | |||||| |||| ||||| ||||||  || |||| || |||| ||||       ||||     
T  487282 gtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtataaaacaaggtaaagctgcgtacaatacactaaaatggtgggatggc 487183  T
Q  111 ggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    || || ||||||| ||  ||||| |||||||||||||||||||||    
T  487182 gggaccccttcccggattctgcgaatgcgggagctttagtgcacc 487138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 155
Target Start/End: Original strand, 35532077 - 35532115
Alignment:
Q  117 ccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  35532077 ccttcccggaccctgcgtatgcgggagctttagtgcacc 35532115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 155
Target Start/End: Complemental strand, 40553987 - 40553949
Alignment:
Q  117 ccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  40553987 ccttcccggaccctgcgtatgcgggagctttagtgcacc 40553949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 155
Target Start/End: Complemental strand, 50555718 - 50555668
Alignment:
Q  105 aatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||||| ||||||| |||||||||||||| |||| |||||||||||    
T  50555718 aatggtggaaccccttcccggaccctgcgtatgcaggagttttagtgcacc 50555668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 51865145 - 51865050
Alignment:
Q  58 agcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||||| ||||||||||  |||||| || |||| || |||| |||  ||||||  | ||||||| |||||||||||||||||||||||| ||||||    
T  51865145 agcctcttgtgtaaaaaacatggtaaggctgcgtacaatacaccaaa--tggtggggccccttcccggaccctgcgtatgcgggagctttattgcacc 51865050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 153
Target Start/End: Original strand, 20405109 - 20405210
Alignment:
Q  53 gaaatagcctcttttgtaaaaaactagg-taagactacgtataacacacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtg 151  Q
    |||| |||||||| |||||||||  ||| ||||| | |||| || |||| || |||||||| || ||||||| ||||| || ||||||||||||||||||    
T  20405109 gaaacagcctcttgtgtaaaaaaacagggtaagattgcgtacaatacactaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtg 20405208  T
Q  152 ca 153  Q
    ||    
T  20405209 ca 20405210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 154
Target Start/End: Original strand, 30639372 - 30639501
Alignment:
Q  22 tgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttc 121  Q
    ||||||||||| ||||| |||| ||||  |||||| || ||||| |||||||| |  |||||| || |||| || |||| |||  |||||  || |||||    
T  30639372 tgtgactgaaaggtcactggttcaagtcctggaaacagactcttgtgtaaaaa-cagggtaaggctgcgtacaatacaccaaa--tggtgagaccccttc 30639468  T
Q  122 ccagaccctgcgtatgcgggagctttagtgcac 154  Q
    || |||||||| |||||||||||||||||||||    
T  30639469 ccggaccctgcatatgcgggagctttagtgcac 30639501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 32484307 - 32484356
Alignment:
Q  106 atggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||| || ||||||| |||||||| ||||||||||||||||||||||    
T  32484307 atggtgggaccccttcccggaccctgcatatgcgggagctttagtgcacc 32484356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 153
Target Start/End: Original strand, 8820581 - 8820629
Alignment:
Q  105 aatggtggaactccttcccagaccctgcgtatgcgggagctttagtgca 153  Q
    |||||||| || ||||||||||||||||||||||| ||| |||||||||    
T  8820581 aatggtgggaccccttcccagaccctgcgtatgcgagagttttagtgca 8820629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 20225123 - 20225199
Alignment:
Q  79 ggtaagactacgtataacacacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| || |||| || |||| || |||||||| || ||||||| ||||| || ||||||||||||||||||||||    
T  20225123 ggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcacc 20225199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 42164295 - 42164239
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaa 74  Q
    ||||||||||||||| |||||||||| |||| ||||||| | |||||| ||||||||    
T  42164295 gtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaa 42164239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 5306810 - 5306755
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaa 73  Q
    ||||||||||||||| |||||||||| ||||  |||||| |||||||| |||||||    
T  5306810 gtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 5306755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 154
Target Start/End: Original strand, 21489159 - 21489210
Alignment:
Q  103 aaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcac 154  Q
    |||||||||| || |||||||  |||||||||||||||||||||| ||||||    
T  21489159 aaaatggtgggaccccttcccgaaccctgcgtatgcgggagctttcgtgcac 21489210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 25629121 - 25629172
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||| || ||||||| |||||| | ||||||||||||||||||||||    
T  25629121 aaatggtgggaccccttcccggaccctacatatgcgggagctttagtgcacc 25629172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 28494223 - 28494274
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||| || |||||||||| ||||| |||||||||||| |||||||||    
T  28494223 aaatggtgggaccccttcccagatcctgcatatgcgggagctctagtgcacc 28494274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 38786681 - 38786732
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||| || ||||||| |||||||| |||||||||||| |||||||||    
T  38786681 aaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcacc 38786732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 55830783 - 55830732
Alignment:
Q  105 aatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacca 156  Q
    ||||||||||| || |||| |||| |||||||||| ||||||||||||||||    
T  55830783 aatggtggaaccccatcccggaccttgcgtatgcgagagctttagtgcacca 55830732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 151
Target Start/End: Original strand, 16494284 - 16494338
Alignment:
Q  97 acacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtg 151  Q
    |||| ||||||||||| || | ||||||||||||| |||||||| ||||||||||    
T  16494284 acaccaaaaatggtgggaccctttcccagaccctgtgtatgcggaagctttagtg 16494338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 155
Target Start/End: Original strand, 25388249 - 25388299
Alignment:
Q  105 aatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||||| || ||||||| ||||||||||||||  |||||||||||||||    
T  25388249 aatggtgggaccccttcccggaccctgcgtatgcatgagctttagtgcacc 25388299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 156
Target Start/End: Complemental strand, 37038164 - 37038134
Alignment:
Q  126 accctgcgtatgcgggagctttagtgcacca 156  Q
    |||||||||||||||||||||||||||||||    
T  37038164 accctgcgtatgcgggagctttagtgcacca 37038134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 149
Target Start/End: Complemental strand, 49938657 - 49938611
Alignment:
Q  103 aaaatggtggaactccttcccagaccctgcgtatgcgggagctttag 149  Q
    |||||||||| || |||||||| ||||||| ||||||||||||||||    
T  49938657 aaaatggtgggaccccttcccataccctgcatatgcgggagctttag 49938611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 155
Target Start/End: Complemental strand, 55766528 - 55766478
Alignment:
Q  105 aatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||||| || |||| |||| |||||||||| |||||||||||||||    
T  55766528 aatggtggaaccccatcccggaccttgcgtatgcgagagctttagtgcacc 55766478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 13256508 - 13256411
Alignment:
Q  58 agcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||||| ||||||||||  |||||| || |||| || |||| || ||| |||| || |||||||  |||| || | ||||||||||||||||||||    
T  13256508 agcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatagtgggaccccttcccgaaccccgcatctgcgggagctttagtgcacc 13256411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 6e-24; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 39461143 - 39461006
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||| |||||||| |||||||||| ||||  |||||| |||||||| ||||||||||   ||||| || |||| || |||| || |||||||  || |    
T  39461143 gtcatgagactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgcgtacaatacaccaataatggtgagaccc 39461044  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||||||||||||||||||||||||||||||    
T  39461043 cttcccggaccctgcgtatgcgggagctttagtgcacc 39461006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 36720784 - 36720919
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||| || |||||||||| ||||  |||||| |||||||| ||||||||||  |||||| || |||| || |||| |||  |||||| || |    
T  36720784 gtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaa--tggtgggaccc 36720881  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  36720882 cttcccggaccctgcgtatgcggaagctttagtgcacc 36720919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 20284220 - 20284081
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaacta--ggtaagactacgtataacacacaaaaaatggtggaac 115  Q
    ||||||||||||||| |||||||||| ||||  |||||| |||||||| | |||||||  |  |||||| || |||| || |||| || |||||||| ||    
T  20284220 gtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaaaaaagggtaaggctgcgtacaatacaccaataatggtgggac 20284121  T
Q  116 tccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
     ||||||| ||||||||||||||||||| |||||||||||    
T  20284120 cccttcccggaccctgcgtatgcgggagttttagtgcacc 20284081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 28817773 - 28817640
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||| || |||||||||| ||||  |||||| |||||||| ||||||||||  |||||| || |||| || ||||  ||  |||||| || |    
T  28817773 gtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacacccaa--tggtgggaccc 28817676  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgca 153  Q
    |||||| |||||||||||||||||||||||||||||    
T  28817675 cttcccggaccctgcgtatgcgggagctttagtgca 28817640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 21070849 - 21070709
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaacta---ggtaagactacgtataacacacaaaaaatggtggaa 114  Q
    ||||||||||||||| |||||||||| ||||  |||||| |||||||| | |||||||  |   |||||| || |||| || |||| || |||||||| |    
T  21070849 gtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaaaaaaagggtaaggctgcgtacaatacaccaataatggtggga 21070750  T
Q  115 ctccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    | ||||||| ||||||||||||||||||| |||||||||||    
T  21070749 ccccttcccggaccctgcgtatgcgggagttttagtgcacc 21070709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 44530137 - 44530272
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||  || |||||||||| |||| ||||||| | |||||| ||||||||||  |||||| || |||| || |||| |||  |||||| || |    
T  44530137 gtcatgtgactagaaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaa--tggtgggaccc 44530234  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||  |||||||||||||||||||||||||||||||    
T  44530235 cttcctggaccctgcgtatgcgggagctttagtgcacc 44530272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 18 - 123
Target Start/End: Original strand, 11748287 - 11748392
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||| |  ||||||||  |||| || | |||||||||||| | || |    
T  11748287 gtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttttgtaaaaagcagggtaagacagcgtacaatatacaaaaaatggtaggaccc 11748386  T
Q  118 cttccc 123  Q
    ||||||    
T  11748387 cttccc 11748392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 44781653 - 44781517
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||| ||||||||||  ||||||||| ||||  |||||| | |||||| ||||||| ||  |||||| ||  ||| || |||| ||||||| ||| || |    
T  44781653 gtcacgtgactgaaagttcacgggttcaagtcctggaaacaacctcttgtgtaaaagacagggtaaggctgtgtacaatacaccaaaaatgttgggaccc 44781554  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcac 154  Q
    | |||||||||||||||||||||||||||||||||||    
T  44781553 cgtcccagaccctgcgtatgcgggagctttagtgcac 44781517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 17823564 - 17823699
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||| |||| |||||||||| ||||  |||||| |||||||| |||||||| |  | ||||||| |||| || |||| |||  ||||||||| |    
T  17823564 gtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaccaggataagactgcgtaaaatacaccaaa--tggtggaaccc 17823661  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||  ||||||| ||||| ||||||||||||||||    
T  17823662 cttcccgaaccctgcatatgcaggagctttagtgcacc 17823699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 22 - 155
Target Start/End: Complemental strand, 29521828 - 29521697
Alignment:
Q  22 tgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttc 121  Q
    |||||||| || |||||||||| ||||  |||||| |||||||| | ||||||||  |||||| || |||| || |||| |||  |||||| |  || ||    
T  29521828 tgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtttaaaaaacagggtaaggctgcgtacaatacaccaaa--tggtgggaacccatc 29521731  T
Q  122 ccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||||||||||||||||||||||||||||    
T  29521730 ccagaccctgcgtatgcgggagctttagtgcacc 29521697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 34 - 155
Target Start/End: Original strand, 6760826 - 6760947
Alignment:
Q  34 gtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttcccagaccctgcg 133  Q
    |||||||||| ||||  |||||| |||||||| ||||||||||  |||||| || |||| || |||| || |||||||| || ||||| | ||||| ||     
T  6760826 gtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggcttcgtacaatacaccaataatggtgggaccccttctcggaccccgca 6760925  T
Q  134 tatgcgggagctttagtgcacc 155  Q
    ||||||||||||||||||||||    
T  6760926 tatgcgggagctttagtgcacc 6760947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 7136676 - 7136539
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||| || |||| ||||| ||||  |||||| | |||||| |||||||| |  |||||| || |||| || |||| || |||||||| || |    
T  7136676 gtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaccagggtaaggctgcgtacaatacaccaataatggtgggaccc 7136577  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| ||||| || ||||||||||||||||||||||    
T  7136576 cttcccggaccccgcatatgcgggagctttagtgcacc 7136539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 2626507 - 2626646
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaacta---ggtaagactacgtataacacacaaaaaatggtggaa 114  Q
    |||||||||| |||| |||||||||| ||||  |||||| |||||||| |||||||||  |   ||||||||| |||| || |||| |||  || ||| |    
T  2626507 gtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaaaacagggtaagactgcgtacaatacaccaaa--tgatggga 2626604  T
Q  115 ctccttcccagaccctgcgtatgcgggagctttagtgcacca 156  Q
    | |||||||||||||||| ||||||||||||| |||||||||    
T  2626605 ccccttcccagaccctgcatatgcgggagcttcagtgcacca 2626646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 12670395 - 12670262
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||||||||| ||||  |||||| |||||||| ||||||| |   |||||| || |||| || |||| |||  |||||| || |    
T  12670395 gtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacag--ggtaaggctgcgtacaatacaccaaa--tggtgggaccc 12670300  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||||||| |||||||||||| |||||||||    
T  12670299 cttcccggaccctgcatatgcgggagctctagtgcacc 12670262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 30454242 - 30454109
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||||||||| ||||  |||||| |||||||| ||||||| |  ||||||| || ||||  | |||| |||  |||||| || |    
T  30454242 gtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaca--aggtaaggctgcgtacgatacaccaaa--tggtgggaccc 30454147  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||||||| |||||||||||| |||||||||    
T  30454146 cttcccggaccctgcatatgcgggagctctagtgcacc 30454109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 35261667 - 35261802
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||| || |||||||||| |||   |||||| || ||||| ||||||||||  ||||||  | |||| || ||||   ||||||||| || |    
T  35261667 gtcatgtgactggaaggtcacgggttcaagccctggaaacagtctcttgtgtaaaaaacagggtaaggttgcgtacaatacac--caaatggtgggaccc 35261764  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||  |||||||||||||||||||||||||||||||    
T  35261765 cttcctggaccctgcgtatgcgggagctttagtgcacc 35261802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 45071253 - 45071387
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||| || || |||||||||| ||||| |||||| |||||||| |||||||| |  |||||| || |||| || |||| |||  |||||| || |    
T  45071253 gtcatgtgattgtaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaa-cagggtaaggctgcgtacaatacaccaaa--tggtgggaccc 45071349  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||| ||||||||||||||||| ||||||||    
T  45071350 cttcccggaccttgcgtatgcgggagcttcagtgcacc 45071387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 155
Target Start/End: Original strand, 16225047 - 16225144
Alignment:
Q  58 agcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||||| ||||||||||  ||||||||| |||| || |||| || |||||||| |  ||||||| ||||| || ||||||||||||||||||||||    
T  16225047 agcctcttatgtaaaaaacagggtaagactgcgtacaatacaccaataatggtgggatcccttcccggaccccgcatatgcgggagctttagtgcacc 16225144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 154
Target Start/End: Original strand, 26954136 - 26954257
Alignment:
Q  34 gtcacgggtttaagttttggaaatagcctcttttgtaaaaaactagg-taagactacgtataacacacaaaaaatggtggaactccttcccagaccctgc 132  Q
    |||||||||| ||||  |||||| |||||||| |||||||||  ||| |||| || |||| || |||| || |||||||| || ||||||||||||  ||    
T  26954136 gtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccagacctcgc 26954235  T
Q  133 gtatgcgggagctttagtgcac 154  Q
     |||||||||||||||||||||    
T  26954236 atatgcgggagctttagtgcac 26954257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 152
Target Start/End: Original strand, 13160690 - 13160821
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||| || |||||||||| ||||  | |||| |||||||| |||||||| |  |||||| || |||| || |||| |||  |||||| || |    
T  13160690 gtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaa-cagggtaaggctgcgtacaatacaccaaa--tggtgggaccc 13160786  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgc 152  Q
    |||||| |||||||||||||||||||||| |||||    
T  13160787 cttcccggaccctgcgtatgcgggagcttcagtgc 13160821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 8897911 - 8897776
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||| | || |||||||||| ||||  |||||| | || ||| |||||||||   |||||| ||||||| || |||| |||  |||||| || |    
T  8897911 gtcatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtacaatacaccaaa--tggtgggaccc 8897814  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||||||| ||||||||||||||| ||||||    
T  8897813 cttcccggaccctgcatatgcgggagctttactgcacc 8897776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 155
Target Start/End: Original strand, 16013521 - 16013579
Alignment:
Q  97 acacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||| ||||||||||  || |||||||||||||||| ||||||||||||||||||||||    
T  16013521 acactaaaaatggtgcgaccccttcccagaccctgcctatgcgggagctttagtgcacc 16013579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 156
Target Start/End: Original strand, 29877115 - 29877218
Alignment:
Q  51 tggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagt 150  Q
    |||||| ||||| || ||||||||||  |||||| || |||| || |||| |||  |||||| || ||||||| |||||||||||||||||||| |||||    
T  29877115 tggaaacagccttttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagcgttagt 29877212  T
Q  151 gcacca 156  Q
    ||||||    
T  29877213 gcacca 29877218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 155
Target Start/End: Original strand, 5689640 - 5689754
Alignment:
Q  39 gggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttcccagaccctgcgtatgc 138  Q
    ||||| |||| ||| |||||||||||| |||||||| |  |||||| || |||| || |||| |||  ||||||||| |||||||  ||| ||||||||     
T  5689640 gggttcaagtcttgtaaatagcctcttgtgtaaaaagcagggtaaggctgcgtacaatacaccaaa--tggtggaaccccttcccgaaccatgcgtatgt 5689737  T
Q  139 gggagctttagtgcacc 155  Q
    |||||||||||||||||    
T  5689738 gggagctttagtgcacc 5689754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 155
Target Start/End: Complemental strand, 8484080 - 8483950
Alignment:
Q  23 gtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttcc 122  Q
    |||||| |||||||| ||||| ||||  |||||| | |||||| ||||||||||  || ||| || |||| || |||| ||   |||||| || || |||    
T  8484080 gtgacttaaatgtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggcaaggctgcgtacaatacaccaat--tggtgggaccccatcc 8483983  T
Q  123 cagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||||||||||||||||||||| |||||    
T  8483982 cagaccctgcgtatgcgggagctttagggcacc 8483950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 155
Target Start/End: Original strand, 20869944 - 20870048
Alignment:
Q  51 tggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagt 150  Q
    |||||| || ||||| ||||||||||  |||||| || |||| || |||| || |||||||| || ||||||  ||||| || |||||||||||||||||    
T  20869944 tggaaacagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttccaggaccccgcatatgcgggagctttagt 20870043  T
Q  151 gcacc 155  Q
    |||||    
T  20870044 gcacc 20870048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 12625962 - 12626013
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||| || || |||| |||||||||||||||||||||||||||||||    
T  12625962 aaatggtgggaccccctcccggaccctgcgtatgcgggagctttagtgcacc 12626013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 155
Target Start/End: Complemental strand, 27468141 - 27468104
Alignment:
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||||||||||||||||||||||||||||||    
T  27468141 cttcccggaccctgcgtatgcgggagctttagtgcacc 27468104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 155
Target Start/End: Complemental strand, 18164808 - 18164772
Alignment:
Q  119 ttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||| |||||||||||||||||||||||||||||||    
T  18164808 ttcccggaccctgcgtatgcgggagctttagtgcacc 18164772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 18164906 - 18164850
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaa 74  Q
    ||||||||||||||| |||||||||| ||||  |||||| |||||||| ||||||||    
T  18164906 gtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 18164850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 155
Target Start/End: Original strand, 27507985 - 27508033
Alignment:
Q  107 tggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| || |||||||  ||||||||||||||||||||||||||||||    
T  27507985 tggtgggaccccttcccgaaccctgcgtatgcgggagctttagtgcacc 27508033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 20869643 - 20869588
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaa 73  Q
    ||||||||||||||| |||||||||| ||||  |||||| |||||||| |||||||    
T  20869643 gtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 20869588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 26102589 - 26102640
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||| || ||||||| |||||||| |||||||||||| |||||||||    
T  26102589 aaatggtgggaccccttcccggaccctgcttatgcgggagctctagtgcacc 26102640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 28407475 - 28407526
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||| || ||||||| |||||| ||||||||||||||||| ||||||    
T  28407475 aaatggtgggaccccttcccggaccctacgtatgcgggagctttactgcacc 28407526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 31457244 - 31457295
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||| | || |||||||| |||||||||||||||||||| |||||||||    
T  31457244 aaatggtaggaccccttcccaaaccctgcgtatgcgggagctctagtgcacc 31457295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 148
Target Start/End: Original strand, 24245495 - 24245565
Alignment:
Q  79 ggtaagactacgtataacacac-aaaaaatggtggaactccttcccagaccctgcgtatgcgggagcttta 148  Q
    |||||||||||||| ||  ||| ||||||| |||| || ||||||  ||||||||||||||||||||||||    
T  24245495 ggtaagactacgtacaatgcaccaaaaaattgtgggaccccttcctggaccctgcgtatgcgggagcttta 24245565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 25250510 - 25250647
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||| || |||||  ||| ||||  |||||| ||||| || |||||||||   |||| | || |||| || |||| || |||||||| || |    
T  25250510 gtcatgtgactggaaggtcacatgttcaagtcctggaaacagcctattgtgtaaaaaatagggtatggctgcgtacaatacaccaataatggtgggaccc 25250609  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||  |||| || |||||||||| |||||||||||    
T  25250610 cttcccgaaccccgcatatgcgggagatttagtgcacc 25250647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 1e-21; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 42805512 - 42805649
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||| || |||||||||| ||||  |||||| |||||||| ||||||||||  |||||| ||  ||| || |||| || |||||||| || |    
T  42805512 gtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaatacaccaataatggtgggaccc 42805611  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| ||||| || ||||||||||||||||||||||    
T  42805612 cttcccggaccccgcatatgcgggagctttagtgcacc 42805649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 155
Target Start/End: Original strand, 47716449 - 47716584
Alignment:
Q  20 catgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactcct 119  Q
    |||||||||| || |||||||||| ||||  |||||| |||||||| ||||||||||  |||||| || |||| || |||| || |||||||| || |||    
T  47716449 catgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggacccct 47716548  T
Q  120 tcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||| ||||| || |||||||||||||| |||||||    
T  47716549 tcccggaccccgcatatgcgggagctttggtgcacc 47716584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 22699117 - 22698979
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| || | ||||| ||||  ||||||||| ||||| ||||||||||  ||||||||| |||| || |||| ||||||||||| || |    
T  22699117 gtcatgtgactgaaaggttatgggttcaagtcctggaaatagtctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaaaatggtgggaccc 22699018  T
Q  118 -cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
      ||||| ||||||| ||||||||||||| |||||||||    
T  22699017 ttttcccggaccctgtgtatgcgggagctatagtgcacc 22698979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 23419821 - 23419688
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||| ||| ||||| |||| ||||| |||||| |||||||| ||||||||||  ||||||||| |||| || ||||   ||||||||| || |    
T  23419821 gtcatgtgactaaaaggtcacaggttcaagttctggaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac--caaatggtgggaccc 23419724  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgca 153  Q
    ||||| ||||| ||||| |||||| |||||||||||    
T  23419723 cttcctagaccttgcgtgtgcgggggctttagtgca 23419688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 42798657 - 42798790
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||| || |||||||||| |||| ||||||| || ||||| |||||||||| ||||||| || |||| || ||||   ||||||||| || |    
T  42798657 gtcatgtgactggaaggtcacgggttcaagtcttggaaacagtctcttgtgtaaaaaacaaggtaaggctgcgtacaatacac--caaatggtgggaccc 42798754  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgca 153  Q
     ||||| |||||||| |||||||||||| |||||||    
T  42798755 tttcccggaccctgcatatgcgggagctatagtgca 42798790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 2541167 - 2541031
Alignment:
Q  18 gtcatgtgactg-aaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaact 116  Q
    |||||||||||| ||| |||||||||| ||||  |||||| |||||||| ||||||||||  |||||| || ||||  | |||| |||  |||||| ||     
T  2541167 gtcatgtgactggaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtactatacaccaaa--tggtgggacc 2541070  T
Q  117 ccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||| | |||||||||||||||||||||||||||||    
T  2541069 ccttcccggtccctgcgtatgcgggagctttagtgcacc 2541031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 11617735 - 11617600
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| ||||| |||| ||||  |||||| | |||||| ||||||||||  ||||||||| |||| || ||||   ||||||||| || |    
T  11617735 gtcatgtgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaagactgcgtacaatacac--caaatggtgggaccc 11617638  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||  |||||||||||||| ||| ||||||||||||    
T  11617637 cttcctggaccctgcgtatgcaggacctttagtgcacc 11617600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 43557460 - 43557598
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||| ||||| ||||  |||||| |||||||| ||||||||||   ||||| || |||| || |||| || |||||||| || |    
T  43557460 gtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgcgtacaatacaccaataatggtgggaccc 43557559  T
Q  118 cttcccagaccctgcgtatgcgggagc-tttagtgcacc 155  Q
    | |||| ||| |||||||||||||||| |||||||||||    
T  43557560 cctcccggactctgcgtatgcgggagcttttagtgcacc 43557598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 14732969 - 14732833
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||| ||||| ||||  |||||| ||||||   ||||||||||  |||||| || |||  || |||| |||||||||| |||||    
T  14732969 gtcatgtgactgaaaagtcatgggttcaagtcctggaaacagcctcccatgtaaaaaacagggtaaggctgcgtc-aatacaccaaaaatggtgaaactc 14732871  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||  ||||||  ||||||||||||||||||||||    
T  14732870 cttcccgaaccctgtttatgcgggagctttagtgcacc 14732833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 156
Target Start/End: Complemental strand, 45018989 - 45018934
Alignment:
Q  101 aaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacca 156  Q
    ||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  45018989 aaaaactggtggaaccccttcccggaccctgcgtatgcgggagctttagtgcacca 45018934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 34 - 155
Target Start/End: Original strand, 7879642 - 7879761
Alignment:
Q  34 gtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttcccagaccctgcg 133  Q
    |||||||||| ||||  |||||| |  ||||| |||||||||| ||||||| || |||| || |||| |||  |||||| || ||||||| |||||||||    
T  7879642 gtcacgggttcaagtcctggaaacaatctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcg 7879739  T
Q  134 tatgcgggagctttagtgcacc 155  Q
    ||||||||||||| ||||||||    
T  7879740 tatgcgggagcttcagtgcacc 7879761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 10693218 - 10693086
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||||||||| ||||  |||||| |||||||| ||||||| |   |||||| || |||| || ||||   ||||||||| || |    
T  10693218 gtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaga--gggtaaggctgcgtacaatacac--caaatggtgggaccc 10693123  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcac 154  Q
    |||||| |||||||| |||||||||||| ||||||||    
T  10693122 cttcccggaccctgcatatgcgggagctctagtgcac 10693086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 40463865 - 40463999
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||| || |||||||||| ||||  | |||| || ||||| |||||||| || |||||| || ||||||| |||| |||  |||||| || |    
T  40463865 gtcatgtgactgtaaggtcacgggttcaagtcatagaaacagtctcttgtgtaaaaa-ctgggtaaggctgcgtataatacaccaaa--tggtgggaccc 40463961  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||| | |||||||||||||||||||||| ||||||||    
T  40463962 cttctcggaccctgcgtatgcgggagcttcagtgcacc 40463999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 48735268 - 48735134
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagt-tttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaact 116  Q
    ||||||||||||||| |||||||||| ||||  ||||||| | |||||| ||||||| ||  |||||| || |||| || ||||   ||||||||| ||     
T  48735268 gtcatgtgactgaaaggtcacgggttcaagtccttggaaacaacctcttgtgtaaaacac--ggtaaggctgcgtacaatacac--caaatggtgggacc 48735173  T
Q  117 ccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||| |||||||| |||||||||||| |||||||||    
T  48735172 ccttcccggaccctgcatatgcgggagctctagtgcacc 48735134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 5180304 - 5180169
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||| ||||| || || |||||| |||||||| ||| ||||||  |||||||||  ||| ||||||| ||||||| | | || |    
T  5180304 gtcatgtgactgaaaggtcaagggttcaacttctggaaacagcctcttgtgtcaaaaacagggtaagactgtgtacaacacaccaaaaatgattggaccc 5180205  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgca 153  Q
    ||| ||| | ||| ||||||| ||||||||| ||||    
T  5180204 ctttccaaatcctacgtatgcaggagctttaatgca 5180169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 18747474 - 18747610
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactagg-taagactacgtataacacacaaaaaatggtggaact 116  Q
    |||| |||||||||| |||||||| | |||| ||||||| ||||| || |||||||||  ||| |||| || ||||||| |||| ||   |||||| ||     
T  18747474 gtcacgtgactgaaaggtcacgggatcaagtcttggaaacagccttttgtgtaaaaaagcagggtaaggctgcgtataatacaccaat--tggtgggacc 18747571  T
Q  117 ccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||   ||||||||||||||||||||||||||||||    
T  18747572 ccttcctgaaccctgcgtatgcgggagctttagtgcacc 18747610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 21172154 - 21172021
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||| ||||||| |||||||||| ||||  |||||| |||||||| ||||||| |   |||||| || |||| || |||| |||  |||||| || |    
T  21172154 gtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacag--ggtaaggctgcgtacaatacaccaaa--tggtgggaccc 21172059  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||||||| |||||||||||| |||||||||    
T  21172058 cttcccggaccctgcatatgcgggagctctagtgcacc 21172021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 33872056 - 33871921
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| ||| |||||| ||||  |||||| | |||||| |||||||| |  | |||| || |||| || |||| |||  |||||| || |    
T  33872056 gtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaa-caggataaggctgcgtacaatacaccaaa--tggtgggaccc 33871960  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacca 156  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  33871959 cttcccagaccctgtgtatgcgagagctttagtgcacca 33871921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 42391245 - 42391112
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||||||||| ||||  |||||| ||| |||| ||||||| |   |||||| || |||| || |||| |||  |||||| || |    
T  42391245 gtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcttcttgtgtaaaacag--ggtaaggctgcgtacaatacaccaaa--tggtgggaccc 42391150  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||||||| |||||||||||| |||||||||    
T  42391149 cttcccggaccctgcatatgcgggagctctagtgcacc 42391112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 79 - 152
Target Start/End: Original strand, 33500562 - 33500635
Alignment:
Q  79 ggtaagactacgtataacacacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgc 152  Q
    ||||||||| ||||  | |||||||||||||||| || ||||||| |||||||||||||||||| ||| |||||    
T  33500562 ggtaagactgcgtactatacacaaaaaatggtgggaccccttcccggaccctgcgtatgcgggatcttcagtgc 33500635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 158
Target Start/End: Original strand, 39123960 - 39124021
Alignment:
Q  97 acacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcaccaag 158  Q
    |||| ||||||||||| || ||||||| ||||||||||||| ||||||||| ||||||||||    
T  39123960 acaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccaag 39124021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 32758249 - 32758382
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| ||||| |||| ||||  |||||| |||||||| ||||||| |   |||||| ||  ||| || |||| |||  |||||| || |    
T  32758249 gtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaacag--ggtaaggctgtgtacaatacaccaaa--tggtgggaccc 32758344  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||||||| |||||||||||| |||||||||    
T  32758345 cttcccggaccctgcatatgcgggagctctagtgcacc 32758382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 155
Target Start/End: Original strand, 36602535 - 36602570
Alignment:
Q  120 tcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||||||||||||||||||||||||||||||    
T  36602535 tcccagaccctgcgtatgcgggagctttagtgcacc 36602570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 14099153 - 14099030
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||| ||||| ||||  |||||||||||| || ||||||||||  | ||||||| |||| || ||||   ||||||||| || |    
T  14099153 gtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaaacaggttaagactgcgtacaatacac--caaatggtgggaccc 14099056  T
Q  118 cttcccagaccctgcgtatgcgggag 143  Q
    ||||||  ||||| ||||||| ||||    
T  14099055 cttcccgaaccctacgtatgcaggag 14099030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 14409170 - 14409047
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||| ||||| ||||  |||||||||||| || ||||||||||  | ||||||| |||| || ||||   ||||||||| || |    
T  14409170 gtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaaacaggttaagactgcgtacaatacac--caaatggtgggaccc 14409073  T
Q  118 cttcccagaccctgcgtatgcgggag 143  Q
    ||||||  ||||| ||||||| ||||    
T  14409072 cttcccgaaccctacgtatgcaggag 14409047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 28362292 - 28362165
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||| |||||| ||||| |||| ||||  | ||||  ||||||| ||||||||||| |||||| || |||| || |||| |||  |||||| || |    
T  28362292 gtcatgtggctgaaaggtcacaggttcaagtcctagaaactgcctcttgtgtaaaaaacttggtaaggctgcgtacaatacaccaaa--tggtgggaccc 28362195  T
Q  118 cttcccagaccctgcgtatgcgggagcttt 147  Q
    ||||||||||| ||| |||| |||||||||    
T  28362194 cttcccagaccttgcatatgtgggagcttt 28362165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 155
Target Start/End: Complemental strand, 35334878 - 35334828
Alignment:
Q  105 aatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||||| || ||||||| |||||||||||||| ||||||||||||||||    
T  35334878 aatggtgggaccccttcccggaccctgcgtatgcaggagctttagtgcacc 35334828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 155
Target Start/End: Complemental strand, 42495912 - 42495874
Alignment:
Q  117 ccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  42495912 ccttcccggaccctgcgtatgcgggagctttagtgcacc 42495874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 154
Target Start/End: Complemental strand, 18512515 - 18512466
Alignment:
Q  105 aatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcac 154  Q
    |||||||| || ||||||| ||||||||||||||||||||||| ||||||    
T  18512515 aatggtgggaccccttcccggaccctgcgtatgcgggagctttggtgcac 18512466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 155
Target Start/End: Original strand, 21566439 - 21566559
Alignment:
Q  34 gtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttcccagaccctgcg 133  Q
    ||||| |||| |||| |||||||  ||||||| ||||||||||   | |||||| |||| || |||| |||| |||| | || |||||||  |||||||     
T  21566439 gtcacaggttcaagtcttggaaaccgcctcttgtgtaaaaaacagaggaagactgcgtacaatacaccaaaa-tggtaggaccccttcccgaaccctgca 21566537  T
Q  134 tatgcgggagctttagtgcacc 155  Q
    ||||||||||||||||||||||    
T  21566538 tatgcgggagctttagtgcacc 21566559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 42476861 - 42476995
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||| ||| ||||||| || ||||| |||||| || ||||| ||||||| |  ||||||| || |||| || |||| |||  |||||| || |    
T  42476861 gtcatgtgactaaaaggtcacggattcaagttctggaaacagtctcttgtgtaaaaca--aggtaaggctgcgtacaatacaccaaa--tggtgggaccc 42476956  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacca 156  Q
    ||||| || | |||| |||||||||||| ||||||||||    
T  42476957 cttcctaggctctgcatatgcgggagctctagtgcacca 42476995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 152
Target Start/End: Complemental strand, 3469245 - 3469190
Alignment:
Q  97 acacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgc 152  Q
    |||| |||||||| || || |||||| |||||||| ||||||||||||||||||||    
T  3469245 acaccaaaaatggcgggaccccttcctagaccctgtgtatgcgggagctttagtgc 3469190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 155
Target Start/End: Original strand, 16341276 - 16341402
Alignment:
Q  28 tgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttcccagac 127  Q
    ||||| |||||||||| ||||| | |||| |||||||| ||||||||||  |||||| ||||||| || |||| |||| ||||||  |  |||||| |||    
T  16341276 tgaaaggtcacgggttcaagttctagaaacagcctcttgtgtaaaaaacagggtaaggctacgtacaatacaccaaaa-tggtgggccctcttcccggac 16341374  T
Q  128 cctgcgtatgcgggagctttagtgcacc 155  Q
    |   | |||||||||||||| |||||||    
T  16341375 ctatcatatgcgggagctttggtgcacc 16341402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 147
Target Start/End: Complemental strand, 27889379 - 27889336
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagcttt 147  Q
    ||||||||| || ||||||| |||||||||||||||||||||||    
T  27889379 aaatggtgggaccccttcccggaccctgcgtatgcgggagcttt 27889336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 155
Target Start/End: Original strand, 25434113 - 25434143
Alignment:
Q  125 gaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||||||||||||||||||||||||||||    
T  25434113 gaccctgcgtatgcgggagctttagtgcacc 25434143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 34626271 - 34626225
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagt 150  Q
    ||||||||| |  ||||||| ||||||||||||||||||||||||||    
T  34626271 aaatggtgggatcccttcccggaccctgcgtatgcgggagctttagt 34626225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 146
Target Start/End: Original strand, 19266438 - 19266564
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| |||  ||||| ||||  || |||||||| |||  |||||||||  |||||| || |||| || |||| |||  | |||| |  |    
T  19266438 gtcatgtgactgaaaggtcgtgggttcaagtcctgaaaatagccacttgcgtaaaaaacagggtaaggctgcgtacaatacaccaaa--ttgtgggatcc 19266535  T
Q  118 cttcccagaccctgcgtatgcgggagctt 146  Q
    |||||| ||||||||||||||||||||||    
T  19266536 cttcccggaccctgcgtatgcgggagctt 19266564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 155
Target Start/End: Original strand, 23231578 - 23231680
Alignment:
Q  51 tggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagt 150  Q
    |||||| |||||||| ||||||| |  ||||||| || ||||||| ||||  ||  || ||| || |||||||  ||||||||||||||| |||||||||    
T  23231578 tggaaagagcctcttgtgtaaaatataaggtaaggctgcgtataatacaccgaa--tgatgggaccccttcccgaaccctgcgtatgcggcagctttagt 23231675  T
Q  151 gcacc 155  Q
    |||||    
T  23231676 gcacc 23231680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 13170 - 13036
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| ||||| |||| ||||  |||||| ||||||||  || |||||| ||||||| || |||| || ||||    |||||||| || |    
T  13170 gtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgcgt-aaaaacaaggtaaggctgcgtacaatacac--cgaatggtgggaccc 13074  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||||||||||||||||||||| |||||||||||||    
T  13073 cttcccagaccctgcgtatgcgggggctttagtgcacc 13036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 46819 - 46954
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||  || |||||||||| ||||  |||||| | |||||| |||||||||   ||||||  | |||| || |||| |||  |||||| || |    
T  46819 gtcatgtgactagaaggtcacgggttcaagtgctggaaacaacctcttgtgtaaaaaatagggtaaggttgcgtacaatacaccaaa--tggtgggaccc 46916  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||||||||||||||||||||||||||||||    
T  46917 cttcccggaccctgcgtatgcgggagctttagtgcacc 46954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 58 - 153
Target Start/End: Complemental strand, 24879 - 24786
Alignment:
Q  58 agcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgca 153  Q
    |||||||| ||||||||||  |||||| || |||| ||||||| |||  |||||| || |||||||  ||||||||||||||||||||||||||||    
T  24879 agcctcttgtgtaaaaaacagggtaaggctgcgtacaacacaccaaa--tggtgggaccccttcccgaaccctgcgtatgcgggagctttagtgca 24786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 153
Target Start/End: Complemental strand, 46771 - 46721
Alignment:
Q  103 aaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgca 153  Q
    |||||||||| || |||||||||||||||||||||||||||||||| ||||    
T  46771 aaaatggtgggaccccttcccagaccctgcgtatgcgggagctttaatgca 46721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 10798 - 10932
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    |||||||||||| || |||||||||| ||| | || ||| | |||||| ||||||||||  |||| | || |||  || |||| |||  |||||| || |    
T  10798 gtcatgtgactggaaggtcacgggttcaaggtctgaaaacaacctcttgtgtaaaaaacagggtagggctgcgtccaatacaccaaa--tggtgggaccc 10895  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcac 154  Q
    |||||| ||||||||||||||||||||||||||||||    
T  10896 cttcccggaccctgcgtatgcgggagctttagtgcac 10932  T

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Target: scaffold0223 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 156
Target Start/End: Original strand, 11122 - 11253
Alignment:
Q  21 atgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactcctt 120  Q
    |||||||||||| |||||||||| ||||  |||||| |||||||| ||||||| |  | ||||| || | || || |||| |||  |||||| || ||||    
T  11122 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaca--aagtaaggctgcttacaatacaccaaa--tggtgggacacctt 11217  T
Q  121 cccagaccctgcgtatgcgggagctttagtgcacca 156  Q
    ||| |||||||| |||||||||||| ||||||||||    
T  11218 cccggaccctgcatatgcgggagctctagtgcacca 11253  T

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Target: scaffold0168 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 30567 - 30700
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactc 117  Q
    ||||||||||||||| ||||| |||| ||||  |||||| |||||||| ||||||| |   |||| | || |||| || |||| |||  |||||| || |    
T  30567 gtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgtgtaaaacag--ggtagggctgcgtacaatacaccaaa--tggtgggaccc 30662  T
Q  118 cttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    |||||| |||||||| |||||||||||| |||||||||    
T  30663 cttcccggaccctgcatatgcgggagctctagtgcacc 30700  T

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Target: scaffold1176 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 1650 - 1598
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacca 156  Q
    ||||| ||| || ||||||| ||||| ||||||||||||||||||||||||||    
T  1650 aaatgatgggaccccttcccggacccggcgtatgcgggagctttagtgcacca 1598  T

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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 72930 - 72878
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacca 156  Q
    ||||||| | || ||||||| || |||||||||||||||||||||||||||||    
T  72930 aaatggtagtaccccttcccggaacctgcgtatgcgggagctttagtgcacca 72878  T

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Target: scaffold0187 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 10195 - 10140
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaa 73  Q
    ||||||||||||||| |||||||||| ||||  |||||| |||||||| |||||||    
T  10195 gtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 10140  T

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Target: scaffold0187; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 20523 - 20468
Alignment:
Q  18 gtcatgtgactgaaatgtcacgggtttaagttttggaaatagcctcttttgtaaaa 73  Q
    ||||||||||||||| |||||||||| ||||  |||||| |||||||| |||||||    
T  20523 gtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 20468  T

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Target: scaffold0180 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 155
Target Start/End: Complemental strand, 24196 - 24145
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||| || ||||||| |||||||| |||||||||||| |||||||||    
T  24196 aaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcacc 24145  T

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Target: scaffold0015 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 155
Target Start/End: Complemental strand, 48697 - 48646
Alignment:
Q  104 aaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||| || ||||||| |||||||| |||||||||||| |||||||||    
T  48697 aaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcacc 48646  T

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Target: scaffold0954 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 155
Target Start/End: Original strand, 3565 - 3667
Alignment:
Q  51 tggaaatagcctcttttgtaaaaaactaggtaagactacgtataacacacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagt 150  Q
    |||||| |||||||| ||||||| |  ||||||| || ||||||| ||||  ||  || ||| || |||||||  ||||||||||||||| |||||||||    
T  3565 tggaaagagcctcttgtgtaaaatataaggtaaggctgcgtataatacaccgaa--tgatgggaccccttcccgaaccctgcgtatgcggcagctttagt 3662  T
Q  151 gcacc 155  Q
    |||||    
T  3663 gcacc 3667  T

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Target: scaffold0194 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 24697 - 24771
Alignment:
Q  79 ggtaagactacgtataacacacaaaaaatggtggaactccttcccagaccctgcgtatgcgggagctttagtgcacc 155  Q
    ||||||||| ||||||| |||| ||| |  ||||| | |||| ||||||||||||||| ||||||||| ||||||||    
T  24697 ggtaagactgcgtataatacaccaaata--gtggaccccctttccagaccctgcgtatacgggagcttcagtgcacc 24771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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