View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4336_low_20 (Length: 350)

Name: NF4336_low_20
Description: NF4336
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4336_low_20
NF4336_low_20
[»] chr7 (13 HSPs)
chr7 (1-340)||(24486623-24486962)
chr7 (168-309)||(3889991-3890133)
chr7 (168-309)||(3902033-3902175)
chr7 (168-309)||(3889541-3889683)
chr7 (235-313)||(46963238-46963316)
chr7 (216-313)||(21814267-21814364)
chr7 (169-313)||(44338841-44338987)
chr7 (168-313)||(17921373-17921519)
chr7 (148-313)||(15614424-15614591)
chr7 (249-313)||(26403375-26403439)
chr7 (103-313)||(11828089-11828305)
chr7 (81-144)||(21814185-21814248)
chr7 (168-228)||(3901776-3901836)
[»] chr1 (6 HSPs)
chr1 (162-317)||(11993414-11993569)
chr1 (235-313)||(10354219-10354297)
chr1 (172-313)||(2071704-2071848)
chr1 (172-313)||(2075234-2075378)
chr1 (235-313)||(3774490-3774568)
chr1 (235-289)||(15629549-15629603)
[»] chr6 (8 HSPs)
chr6 (82-312)||(28063174-28063406)
chr6 (216-313)||(33424154-33424252)
chr6 (168-313)||(13098033-13098179)
chr6 (235-317)||(18984357-18984439)
chr6 (235-302)||(2131735-2131802)
chr6 (235-313)||(21862424-21862502)
chr6 (235-317)||(9290809-9290892)
chr6 (250-313)||(13109445-13109508)
[»] chr5 (6 HSPs)
chr5 (169-313)||(24137388-24137534)
chr5 (184-313)||(9512268-9512395)
chr5 (236-313)||(27315112-27315189)
chr5 (235-290)||(11320618-11320673)
chr5 (237-273)||(16404789-16404825)
chr5 (235-287)||(18720617-18720669)
[»] chr4 (3 HSPs)
chr4 (184-313)||(54148082-54148212)
chr4 (185-313)||(24225860-24225989)
chr4 (235-313)||(16871510-16871588)
[»] scaffold0499 (1 HSPs)
scaffold0499 (168-313)||(7029-7175)
[»] chr2 (6 HSPs)
chr2 (235-313)||(8986786-8986864)
chr2 (169-313)||(38583664-38583810)
chr2 (125-305)||(42633118-42633299)
chr2 (235-313)||(32291013-32291091)
chr2 (168-313)||(20593582-20593726)
chr2 (281-313)||(29409245-29409277)
[»] chr3 (6 HSPs)
chr3 (216-313)||(16462807-16462904)
chr3 (235-313)||(22821033-22821111)
chr3 (235-300)||(34338084-34338149)
chr3 (81-144)||(16462725-16462788)
chr3 (250-313)||(42531164-42531227)
chr3 (236-313)||(29555925-29556001)
[»] chr8 (5 HSPs)
chr8 (169-313)||(20242518-20242664)
chr8 (169-313)||(20250496-20250642)
chr8 (235-313)||(5616788-5616866)
chr8 (216-313)||(16578956-16579054)
chr8 (216-313)||(16583696-16583794)
[»] scaffold0007 (1 HSPs)
scaffold0007 (236-313)||(14427-14504)
[»] scaffold0025 (1 HSPs)
scaffold0025 (257-313)||(153483-153539)
[»] scaffold0048 (1 HSPs)
scaffold0048 (238-313)||(62006-62081)
[»] scaffold0018 (1 HSPs)
scaffold0018 (237-290)||(31961-32014)


Alignment Details
Target: chr7 (Bit Score: 320; Significance: 1e-180; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 1 - 340
Target Start/End: Complemental strand, 24486962 - 24486623
Alignment:
Q  1 tgtacttctaccccttttgatgattctgtttggttgtttcccactattgacttttctgtatggctgtttttccctatcgatcttgtttggtttagcttta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24486962 tgtacttctaccccttttgatgattctgtttggttgtttcccactattgacttttctgtatggttgtttttccctatcgatcttgtttggtttagcttta 24486863  T
Q  101 aatggttcttcttattggatggtctctctctttgcctggttgataattcttgttgcttccactacgttgataactcactttggttgctgctattcattgg 200  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  24486862 aatggttcttcttattggatggtttctctctttgcctggttgataattcttgttgcttccactacgttgatgactcactctggttgctgctattcattgg 24486763  T
Q  201 ttatgctataacttcatttggtttattttcggagtaatttgtaacaaacttaaagcttagtaagctttaacttcaagggtagtgttagaagtttatatta 300  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24486762 ttatgctataacttcatttggtttatttttggagtaatttgtaacaaacttaaagcttagtaagctttaacttcaagggtagtgttagaagtttatatta 24486663  T
Q  301 tttagtatgttttcgtaacttgaagaatatcatgatgatg 340  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  24486662 tttagtatgttttcgtaacttgaagaatatcatgatgatg 24486623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 168 - 309
Target Start/End: Original strand, 3889991 - 3890133
Alignment:
Q  168 tgataactcactttggttgctgctattcattggttatgctataacttcatttggtttattttcggagtaatttgtaacaaacttaaagcttagtaagctt 267  Q
    |||||| |||||||||||| |||| |||||| ||| || ||| | || ||||||||||||||  |  |||||||||||||  ||||||||||||||||||    
T  3889991 tgataattcactttggttgttgctcttcattagttttgatatcatttgatttggtttattttttggttaatttgtaacaagtttaaagcttagtaagctt 3890090  T
Q  268 taacttcaagggtag-tgttagaagtttatattatttagtatg 309  Q
    || ||| ||| |||| |||||||| ||||||||||||| ||||    
T  3890091 tagcttaaagtgtagttgttagaactttatattatttaatatg 3890133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 309
Target Start/End: Original strand, 3902033 - 3902175
Alignment:
Q  168 tgataactcactttggttgctgctattcattggttatgctataacttcatttggtttatttt--cggagtaatttgtaacaaacttaaagcttagtaagc 265  Q
    |||||| ||||||||||||||||| |||||||||| || ||| |  | || |||||||||||  |||  |||||||||||||  ||||||||||| ||||    
T  3902033 tgataattcactttggttgctgctcttcattggttttgatatcagctgatctggtttattttttcggt-taatttgtaacaagtttaaagcttagcaagc 3902131  T
Q  266 tttaacttcaagggtagtgttagaagtttatattatttagtatg 309  Q
    |||| ||| ||||| |||||||||| ||||||||||||| ||||    
T  3902132 tttagcttaaagggaagtgttagaactttatattatttaatatg 3902175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 168 - 309
Target Start/End: Original strand, 3889541 - 3889683
Alignment:
Q  168 tgataactcactttggttgctgctattcattggttatgctataacttcatttggtttattttcggagt-aatttgtaacaaacttaaagcttagtaagct 266  Q
    |||||| ||||||||||||||||| |||||||||| || |||   || ||||||||||||||  | || ||||||||| ||  ||||||||||| || ||    
T  3889541 tgataattcactttggttgctgctcttcattggttttgatatcggttgatttggtttattttttgggttaatttgtaataagtttaaagcttagcaaact 3889640  T
Q  267 ttaacttcaagggtagtgttagaagtttatattatttagtatg 309  Q
    ||| ||| ||||| |||||||||| ||||||||||||| ||||    
T  3889641 ttagcttaaagggaagtgttagaactttatattatttaatatg 3889683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 313
Target Start/End: Complemental strand, 46963316 - 46963238
Alignment:
Q  235 taatttgtaacaaacttaaagcttagtaagctttaacttcaagggtagtgttagaagtttatattatttagtatgtttt 313  Q
    |||||||||||||  |||||||||||||||||| | ||| | |||||||||||||| ||||||||||||||||||||||    
T  46963316 taatttgtaacaagtttaaagcttagtaagcttcagcttgaggggtagtgttagaactttatattatttagtatgtttt 46963238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 313
Target Start/End: Original strand, 21814267 - 21814364
Alignment:
Q  216 atttggtttattttcggagtaatttgtaacaaacttaaagcttagtaagctttaacttcaagggtagtgttagaagtttatattatttagtatgtttt 313  Q
    ||||||| |||||||||  |||| |||||||||| |||||||| |||||  | ||||| | |||||||||||||| ||||||||||||||||||||||    
T  21814267 atttggtatattttcgggataatatgtaacaaacataaagcttggtaagactcaacttgaggggtagtgttagaactttatattatttagtatgtttt 21814364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 313
Target Start/End: Original strand, 44338841 - 44338987
Alignment:
Q  169 gataactcactttggttgctgctattcattggttatgctataacttcatttggtttatttt--cggagtaatttgtaacaaacttaaagcttagtaagct 266  Q
    ||||||||||||||||||||||| |||||||||| |||||  |  | ||||||||||||||    || |||||||||| |  |||||||||||||||||     
T  44338841 gataactcactttggttgctgctcttcattggttctgctaacagctgatttggtttatttttctagattaatttgtaataggcttaaagcttagtaagcc 44338940  T
Q  267 ttaacttcaagggtagtgttagaagtttatattatttagtatgtttt 313  Q
    | ||||| | |||| ||||| ||| ||||||||| ||||||| ||||    
T  44338941 tcaacttgaggggtggtgtttgaactttatattacttagtatatttt 44338987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 168 - 313
Target Start/End: Complemental strand, 17921519 - 17921373
Alignment:
Q  168 tgataactcactttggttgctgctattcattggttatgctataacttcatttggtttattttcggagt-aatttgtaacaaacttaaagcttagtaagct 266  Q
    ||||||||||||| |||||||||| |   |||||| || ||| |  | ||||| ||||||||| | || |||||||||||| ||||||||||||||||||    
T  17921519 tgataactcacttcggttgctgctctctgttggttctgttatcagctaatttgttttattttctgggttaatttgtaacaagcttaaagcttagtaagct 17921420  T
Q  267 ttaacttcaagggtagtgttagaagtttatattatttagtatgtttt 313  Q
    ||| ||| | ||||| ||||  || |||| |||||||||||||||||    
T  17921419 ttagcttgaggggtactgttcaaattttaaattatttagtatgtttt 17921373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 313
Target Start/End: Complemental strand, 15614591 - 15614424
Alignment:
Q  148 tcttgttgcttccactacgttgataactcactttggttgctgctattcattggttatgctataacttcatttggtttattttc--ggagtaatttgtaac 245  Q
    ||||||||||  | |||||  |||||||||||||||||| |||| | |||||||| |||||  |    ||||||||||||||   ||  |||||| ||||    
T  15614591 tcttgttgctctctctacgaagataactcactttggttgatgctctccattggttttgctaacaacagatttggtttatttttctgggttaatttttaac 15614492  T
Q  246 aaacttaaagcttagtaagctttaacttcaagggtagtgttagaagtttatattatttagtatgtttt 313  Q
    || |||||| |||||||||||| | ||  | ||||||||| |||| ||||||||||||||||||||||    
T  15614491 aagcttaaaacttagtaagcttcagctcgaggggtagtgtaagaactttatattatttagtatgtttt 15614424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 249 - 313
Target Start/End: Original strand, 26403375 - 26403439
Alignment:
Q  249 cttaaagcttagtaagctttaacttcaagggtagtgttagaagtttatattatttagtatgtttt 313  Q
    ||||||||||||||| ||||| ||| | |||||||||||||| ||||||||||||||||||||||    
T  26403375 cttaaagcttagtaaactttagcttgaggggtagtgttagaactttatattatttagtatgtttt 26403439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 313
Target Start/End: Complemental strand, 11828305 - 11828089
Alignment:
Q  103 tggttcttcttattggatggtctctctctttgcctggttgataattcttgttgcttccactacgttgataactcactttggttgctgctattcattggtt 202  Q
    ||||||||||  ||||||||| ||||||||||  || |||||  |||||| | ||  | |||   ||||||||||||||  |||||||| | ||||||||    
T  11828305 tggttcttctacttggatggtttctctctttggttgattgatggttcttgctactctctctataatgataactcactttccttgctgctctccattggtt 11828206  T
Q  203 atgctataacttcatttggtttattttcggag--taatttgtaacaaacttaaagcttagtaagctttaacttcaagggta--gtgttagaagtttatat 298  Q
      ||||| |  | |||| |||||||||   ||  ||||||||||||| ||||| ||||||||| ||| ||||| | |||||  ||||||||| || ||||    
T  11828205 ccgctatcaaatgatttagtttatttttctaggttaatttgtaacaagcttaaggcttagtaatcttcaacttgaggggtaatgtgttagaacttcatat 11828106  T
Q  299 --tatttagtatgtttt 313  Q
      |||||||||||||||    
T  11828105 tatatttagtatgtttt 11828089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 21814185 - 21814248
Alignment:
Q  81 tcttgtttggtttagctttaaatggttcttcttattggatggtctctctctttgcctggttgat 144  Q
    ||||||||||||||| || |||||||||||||  ||||||| | |||||||||| || ||||||    
T  21814185 tcttgtttggtttagtttgaaatggttcttctgcttggatgatttctctctttggcttgttgat 21814248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 3901776 - 3901836
Alignment:
Q  168 tgataactcactttggttgctgctattcattggttatgctataacttcatttggtttattt 228  Q
    |||||| |||||||||||| |||| |||||||||| || ||| || | |||||||||||||    
T  3901776 tgataattcactttggttgatgctcttcattggttttgatatcacctgatttggtttattt 3901836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 7e-40; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 162 - 317
Target Start/End: Original strand, 11993414 - 11993569
Alignment:
Q  162 ctacgttgataactcactttggttgctgctattcattggttatgctataacttcatttggtttattttcggagtaatttgtaacaaacttaaagcttagt 261  Q
    ||||| ||||||||||||||||||| |||| ||||||||||||||||| |  | |||||||||||||||   || | || |||||| |||||| |||| |    
T  11993414 ctacgatgataactcactttggttgatgctcttcattggttatgctatcagctgatttggtttattttctttgttaattttaacaagcttaaatcttaat 11993513  T
Q  262 aagctttaacttcaagggtagtgttagaagtttatattatttagtatgttttcgta 317  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  11993514 aagctttaacttgaggggtagtgttagaagtttatattatttagtatgttttcgta 11993569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 235 - 313
Target Start/End: Original strand, 10354219 - 10354297
Alignment:
Q  235 taatttgtaacaaacttaaagcttagtaagctttaacttcaagggtagtgttagaagtttatattatttagtatgtttt 313  Q
    |||||| |||||||||||||||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||||    
T  10354219 taatttctaacaaacttaaagcttagtaagctttagcttgaagagtagtgttagaactttatattatttagtatgtttt 10354297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 172 - 313
Target Start/End: Complemental strand, 2071848 - 2071704
Alignment:
Q  172 aactcactttggttgctgctattcattggttatgctataacttcatttggtttattttc--ggagtaatttgtaacaaacttaaa-gcttagtaagcttt 268  Q
    ||||||||||||||| |||| | |||| |||||||||| |  | |||| |||||||||   ||  ||||||||||||| |||||| ||||||||||||||    
T  2071848 aactcactttggttgttgctctccatttgttatgctatcaactgatttagtttatttttatggtttaatttgtaacaagcttaaacgcttagtaagcttt 2071749  T
Q  269 aacttcaagggtagtgttagaagtttatattatttagtatgtttt 313  Q
    | ||| | ||||||||||| |||||||||||||||||||||||||    
T  2071748 agcttgaggggtagtgttacaagtttatattatttagtatgtttt 2071704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 172 - 313
Target Start/End: Complemental strand, 2075378 - 2075234
Alignment:
Q  172 aactcactttggttgctgctattcattggttatgctataacttcatttggtttattttc--ggagtaatttgtaacaaacttaaa-gcttagtaagcttt 268  Q
    ||||||||||||||| |||| |  ||| |||||||||| |  | |||| |||||||||   ||  ||||||||||||| |||||| ||||||||||||||    
T  2075378 aactcactttggttgttgctctctatttgttatgctatcaactgatttagtttatttttatggtttaatttgtaacaagcttaaacgcttagtaagcttt 2075279  T
Q  269 aacttcaagggtagtgttagaagtttatattatttagtatgtttt 313  Q
    | ||| | ||||||||||| |||||||||||||||||||||||||    
T  2075278 agcttgaggggtagtgttacaagtttatattatttagtatgtttt 2075234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 313
Target Start/End: Complemental strand, 3774568 - 3774490
Alignment:
Q  235 taatttgtaacaaacttaaagcttagtaagctttaacttcaagggtagtgttagaagtttatattatttagtatgtttt 313  Q
    ||||||||||||| | ||||||||||||||||||||||| | ||||| ||||||||||||||||| |||| ||||||||    
T  3774568 taatttgtaacaagcataaagcttagtaagctttaacttgaggggtaatgttagaagtttatattttttaatatgtttt 3774490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 289
Target Start/End: Complemental strand, 15629603 - 15629549
Alignment:
Q  235 taatttgtaacaaacttaaagcttagtaagctttaacttcaagggtagtgttaga 289  Q
    ||||||||||||| ||||||||||||||||||| | ||| | |||||||||||||    
T  15629603 taatttgtaacaagcttaaagcttagtaagcttcagcttgaggggtagtgttaga 15629549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 1e-38; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 82 - 312
Target Start/End: Complemental strand, 28063406 - 28063174
Alignment:
Q  82 cttgtttggtttagctttaaatggttcttcttattggatggtctctctctttgcctggttgataattcttgttgcttccactacgttgataactcacttt 181  Q
    |||||||||||||| || |||||||||||||  ||||||| | |||||||||| ||||||||| ||| ||||| |   | ||| | ||| ||||||||||    
T  28063406 cttgtttggtttagtttgaaatggttcttctgcttggatgatttctctctttggctggttgatgattgttgttacactctctatgatgacaactcacttt 28063307  T
Q  182 ggttgctgctattcattggttatgctataacttcatttggtttattttc--ggagtaatttgtaacaaacttaaagcttagtaagctttaacttcaaggg 279  Q
    |||||||||| |  |||||||||||||| |  | ||||||||||||||   ||  ||||||||||||| ||||||||||||||| ||| | ||| | |||    
T  28063306 ggttgctgctctctattggttatgctatcagctgatttggtttatttttctgggttaatttgtaacaagcttaaagcttagtaaacttcatcttgagggg 28063207  T
Q  280 tagtgttagaagtttatattatttagtatgttt 312  Q
     |||||||||| |||||||||||||||||||||    
T  28063206 aagtgttagaactttatattatttagtatgttt 28063174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 216 - 313
Target Start/End: Complemental strand, 33424252 - 33424154
Alignment:
Q  216 atttggtttattttc-ggagtaatttgtaacaaacttaaagcttagtaagctttaacttcaagggtagtgttagaagtttatattatttagtatgtttt 313  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||| | |||||||||||||| ||||||||||||||||||||||    
T  33424252 atttggtttattttctggattaatttgtaacaaacttaaagcttagtaagcttcaacttgaggggtagtgttagaactttatattatttagtatgtttt 33424154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 168 - 313
Target Start/End: Original strand, 13098033 - 13098179
Alignment:
Q  168 tgataactcactttggttgctgctattcattggttatgctataacttcatttggtttattttcggagt-aatttgtaacaaacttaaagcttagtaagct 266  Q
    |||||||||||||||| || |||| ||||||| |||||| || |  | ||||||||||||||| | || |||||||||| | |||||| ||||||||||     
T  13098033 tgataactcactttgggtgttgctcttcattgattatgccatgagctgatttggtttattttcagggttaatttgtaacgagcttaaaccttagtaagcc 13098132  T
Q  267 ttaacttcaagggtagtgttagaagtttatattatttagtatgtttt 313  Q
    ||| ||| | |||||||||||||||||||||   |||||||||||||    
T  13098133 ttagcttaaggggtagtgttagaagtttatacattttagtatgtttt 13098179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 235 - 317
Target Start/End: Original strand, 18984357 - 18984439
Alignment:
Q  235 taatttgtaacaaacttaaagcttagtaagctttaacttcaagggtagtgttagaagtttatattatttagtatgttttcgta 317  Q
    ||||||||||||| |||||| |||||||||||||| ||| | |||| ||||||||| ||||||||| ||||||| ||||||||    
T  18984357 taatttgtaacaagcttaaaccttagtaagctttagcttgaggggtggtgttagaattttatattacttagtattttttcgta 18984439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 302
Target Start/End: Complemental strand, 2131802 - 2131735
Alignment:
Q  235 taatttgtaacaaacttaaagcttagtaagctttaacttcaagggtagtgttagaagtttatattatt 302  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||||||| | |||| |||||||||||||    
T  2131802 taatttgtaacaagcttaaagcttagtaagcttcaacttgaagggtaatattaggagtttatattatt 2131735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 313
Target Start/End: Original strand, 21862424 - 21862502
Alignment:
Q  235 taatttgtaacaaacttaaagcttagtaagctttaacttcaagggtagtgttagaagtttatattatttagtatgtttt 313  Q
    ||||||||||||| ||||||| |||||| |||| | ||| | ||| |||||||||| ||||||||||||||||||||||    
T  21862424 taatttgtaacaagcttaaagtttagtatgcttcagcttgaggggaagtgttagaactttatattatttagtatgtttt 21862502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 317
Target Start/End: Complemental strand, 9290892 - 9290809
Alignment:
Q  235 taatttgtaacaaacttaaagcttagtaagctttaacttcaagggtagtgttagaagtttatattatttagtatg-ttttcgta 317  Q
    ||||||||||||| |||||||||| |||| ||| | ||||| | ||| |||||||| |||||||||||||||||| ||||||||    
T  9290892 taatttgtaacaagcttaaagcttggtaaacttcagcttcaggagtaatgttagaactttatattatttagtatgcttttcgta 9290809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 313
Target Start/End: Original strand, 13109445 - 13109508
Alignment:
Q  250 ttaaagcttagtaagctttaacttcaagggtagtgttagaagtttatattatttagtatgtttt 313  Q
    ||||| |||||||||||||| ||| | |||| || |||||| ||||||||||||||||||||||    
T  13109445 ttaaaacttagtaagctttagcttaatgggttgtattagaaatttatattatttagtatgtttt 13109508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 1e-32; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 169 - 313
Target Start/End: Original strand, 24137388 - 24137534
Alignment:
Q  169 gataactcactttggttgctgctattcattggttatgctataacttcatttggtttattttc--ggagtaatttgtaacaaacttaaagcttagtaagct 266  Q
    ||||||||| ||||||||||||| |||||||||| |||||  |  | ||||||||||||||   ||  ||||||||||||| ||||||||||||||||||    
T  24137388 gataactcattttggttgctgctcttcattggttctgctagcagctgatttggtttatttttctgggttaatttgtaacaagcttaaagcttagtaagct 24137487  T
Q  267 ttaacttcaagggtagtgttagaagtttatattatttagtatgtttt 313  Q
    ||| ||| | |||||||||||||| ||||||||||||||||||||||    
T  24137488 ttagcttgaggggtagtgttagaactttatattatttagtatgtttt 24137534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 313
Target Start/End: Original strand, 9512268 - 9512395
Alignment:
Q  184 ttgctgctattcattggttatgctataacttcatttggtttattttcggag-taatttgtaacaaacttaaagcttagtaagctttaacttcaagggtag 282  Q
    |||||||| ||||||||||||||||  |  | ||||||||||||||||| | ||||||||||||| |||||   | | ||||| | | ||| | |||| |    
T  9512268 ttgctgctcttcattggttatgctacgagctaatttggtttattttcggggttaatttgtaacaagcttaa---taattaagcatcagcttgatgggttg 9512364  T
Q  283 tgttagaagtttatattatttagtatgtttt 313  Q
    |||||||| ||||||||||||||||||||||    
T  9512365 tgttagaactttatattatttagtatgtttt 9512395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 313
Target Start/End: Original strand, 27315112 - 27315189
Alignment:
Q  236 aatttgtaacaaacttaaagcttagtaagctttaacttcaagggtagtgttagaagtttatattatttagtatgtttt 313  Q
    |||||||||||| |||||| |||||||||||||| ||| | ||||||||||| || || |||||||||| ||| ||||    
T  27315112 aatttgtaacaagcttaaaacttagtaagctttaccttgaggggtagtgttaaaacttcatattatttaatatatttt 27315189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 290
Target Start/End: Complemental strand, 11320673 - 11320618
Alignment:
Q  235 taatttgtaacaaacttaaagcttagtaagctttaacttcaagggtagtgttagaa 290  Q
    ||||||||||||| ||||||||||||||||||| | ||| | ||||||||||||||    
T  11320673 taatttgtaacaagcttaaagcttagtaagcttcagcttgatgggtagtgttagaa 11320618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 16404825 - 16404789
Alignment:
Q  237 atttgtaacaaacttaaagcttagtaagctttaactt 273  Q
    |||| |||||| |||||||||||||||||||||||||    
T  16404825 atttctaacaagcttaaagcttagtaagctttaactt 16404789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 18720669 - 18720617
Alignment:
Q  235 taatttgtaacaaacttaaagcttagtaagctttaacttcaagggtagtgtta 287  Q
    |||||| | ||||| |||||||||||||||||||||||| | ||||| |||||    
T  18720669 taatttttgacaaatttaaagcttagtaagctttaactttaggggtaatgtta 18720617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 6e-25; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 184 - 313
Target Start/End: Original strand, 54148082 - 54148212
Alignment:
Q  184 ttgctgctattcattggttatgctataacttcatttggtttattttcggagt-aatttgtaacaaacttaaagcttagtaagctttaacttcaagggtag 282  Q
    |||||||| |||||| ||||| ||| ||  | |||||||||||||| || || |||||||||||| ||||||||||||||||||| | ||| | ||||||    
T  54148082 ttgctgctcttcattcgttatactacaagctaatttggtttatttttggggttaatttgtaacaagcttaaagcttagtaagcttcagcttgaggggtag 54148181  T
Q  283 tgttagaagtttatattatttagtatgtttt 313  Q
    ||||| |||||||||||||||| ||||||||    
T  54148182 tgttaaaagtttatattatttactatgtttt 54148212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 185 - 313
Target Start/End: Original strand, 24225860 - 24225989
Alignment:
Q  185 tgctgctattcattggttatgctataacttcatttggtttattttcggagt-aatttgtaacaaacttaaagcttagtaagctttaacttcaagggtagt 283  Q
    ||||||| ||||||| ||||| ||| |  | ||||||||||||||||  || |||||||||  | ||| || |||||||||||||||||||| |||||||    
T  24225860 tgctgctcttcattgattatgttatcagctgatttggtttattttcgaggttaatttgtaatgagcttcaaacttagtaagctttaacttcaggggtagt 24225959  T
Q  284 gttagaagtttatattatttagtatgtttt 313  Q
    ||| ||||||||||||||||||||| ||||    
T  24225960 gttcgaagtttatattatttagtatatttt 24225989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 313
Target Start/End: Original strand, 16871510 - 16871588
Alignment:
Q  235 taatttgtaacaaacttaaagcttagtaagctttaacttcaagggtagtgttagaagtttatattatttagtatgtttt 313  Q
    |||||||||||||  |||||||||||||||||| | ||| | |||||||||||||| ||||||||||||||||||||||    
T  16871510 taatttgtaacaagtttaaagcttagtaagcttcagcttgaggggtagtgttagaactttatattatttagtatgtttt 16871588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 168 - 313
Target Start/End: Complemental strand, 7175 - 7029
Alignment:
Q  168 tgataactcactttggttgctgctattcattggttatgctataacttcatttggtttattttcggagt-aatttgtaacaaacttaaagcttagtaagct 266  Q
    |||||||||||||||| || |||| | ||||| |||||| || |  | |||||||||||||||   || |||||||||| | |||||| |||||||||||    
T  7175 tgataactcactttgggtgttgctctccattgattatgccatgagctgatttggtttattttcaaggttaatttgtaacgagcttaaaccttagtaagct 7076  T
Q  267 ttaacttcaagggtagtgttagaagtttatattatttagtatgtttt 313  Q
    ||| ||| | ||||||||||||||||||||| | |||||||||||||    
T  7075 ttagcttaaggggtagtgttagaagtttatactttttagtatgtttt 7029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 235 - 313
Target Start/End: Original strand, 8986786 - 8986864
Alignment:
Q  235 taatttgtaacaaacttaaagcttagtaagctttaacttcaagggtagtgttagaagtttatattatttagtatgtttt 313  Q
    ||||||||||||| ||||||||||||||||||| | ||| | |||||||||||||| ||||||||||||||||||||||    
T  8986786 taatttgtaacaagcttaaagcttagtaagcttcagcttgaggggtagtgttagaactttatattatttagtatgtttt 8986864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 169 - 313
Target Start/End: Complemental strand, 38583810 - 38583664
Alignment:
Q  169 gataactcactttggttgctgctattcattggttatgctataacttcatttggttta---ttttcggagtaatttgtaacaaacttaaagcttagtaagc 265  Q
    ||||||||||||||||||||||| || ||||||| | |||  |  | ||||||||||   |||| ||| ||||||||||| || ||||||||||||||||    
T  38583810 gataactcactttggttgctgctcttaattggttcttctaccagctgatttggtttattttttttggattaatttgtaac-aagttaaagcttagtaagc 38583712  T
Q  266 tttaacttcaagggtagtgttagaagtttatattatttagtatgtttt 313  Q
    || | ||| | |||||||||||||| ||||||||| ||||||||||||    
T  38583711 ttcagcttgaggggtagtgttagaactttatattacttagtatgtttt 38583664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 125 - 305
Target Start/End: Complemental strand, 42633299 - 42633118
Alignment:
Q  125 tctctctttgcctggttgataattcttgttgcttccactacgttgataactcactttggttgctgctattcattggttatgctataacttcatttggttt 224  Q
    ||||| |||| |||||||||  | |||| ||||||| |||  || ||||||||||||||||| || | |||||| || ||||||| |  | |||| ||||    
T  42633299 tctctatttgactggttgatggtccttgctgcttcctctatcttaataactcactttggttgttgttcttcattagtcatgctattagctgatttagttt 42633200  T
Q  225 attttcggagt-aatttgtaacaaacttaaagcttagtaagctttaacttcaagggtagtgttagaagtttatattatttag 305  Q
    |||||| | || ||||| ||| ||||| |||| ||||||||||||||||| | | ||||||||| |||||||||||||||||    
T  42633199 attttcagggttaatttataataaactaaaagtttagtaagctttaacttgaggtgtagtgttaaaagtttatattatttag 42633118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 235 - 313
Target Start/End: Original strand, 32291013 - 32291091
Alignment:
Q  235 taatttgtaacaaacttaaagcttagtaagctttaacttcaagggtagtgttagaagtttatattatttagtatgtttt 313  Q
    ||||| ||||||| ||||||||||||||||||| | ||| | |||||||||||||  ||||||||||||||||||||||    
T  32291013 taattggtaacaagcttaaagcttagtaagcttcagcttgaggggtagtgttagatctttatattatttagtatgtttt 32291091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 313
Target Start/End: Complemental strand, 20593726 - 20593582
Alignment:
Q  168 tgataactcactttggttgctgctattcattggttatgctataacttcatttggttta-ttttcggagtaatttgtaacaaacttaaagcttagtaagct 266  Q
    |||||||||||||||||||||||| ||| ||| || | |||| |  | |||||||||| |||| ||| ||||||||||||| |||||| |||||||| ||    
T  20593726 tgataactcactttggttgctgctcttcgttgattctactatcagctgatttggtttattttttggattaatttgtaacaagcttaaa-cttagtaaact 20593628  T
Q  267 ttaacttcaagggtagtgttagaagtttatattatttagtatgtttt 313  Q
    | ||||| | ||||||| |||||| || ||||||  |||||||||||    
T  20593627 tcaactttaggggtagt-ttagaacttcatattacgtagtatgtttt 20593582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 313
Target Start/End: Complemental strand, 29409277 - 29409245
Alignment:
Q  281 agtgttagaagtttatattatttagtatgtttt 313  Q
    ||||||||||||||||||| |||||||||||||    
T  29409277 agtgttagaagtttatattgtttagtatgtttt 29409245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 313
Target Start/End: Original strand, 16462807 - 16462904
Alignment:
Q  216 atttggtttattttcggagtaatttgtaacaaacttaaagcttagtaagctttaacttcaagggtagtgttagaagtttatattatttagtatgtttt 313  Q
    ||||||| |||||||||  |||| |||||||||| |||||||| |||||  | ||||| | |||||||||||||| ||||||||||||||||||||||    
T  16462807 atttggtatattttcgggataatatgtaacaaacataaagcttggtaagactcaacttgaggggtagtgttagaactttatattatttagtatgtttt 16462904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 313
Target Start/End: Complemental strand, 22821111 - 22821033
Alignment:
Q  235 taatttgtaacaaacttaaagcttagtaagctttaacttcaagggtagtgttagaagtttatattatttagtatgtttt 313  Q
    |||||||||||||  ||||||||||||| |||||| ||| | |||||||||||||| ||||||||||||| ||| ||||    
T  22821111 taatttgtaacaagtttaaagcttagtaggctttagctttaggggtagtgttagaactttatattatttaatatctttt 22821033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 300
Target Start/End: Original strand, 34338084 - 34338149
Alignment:
Q  235 taatttgtaacaaacttaaagcttagtaagctttaacttcaagggtagtgttagaagtttatatta 300  Q
    |||||||||||||  |||||||||||||||||||| ||| | ||||||  ||| ||||||||||||    
T  34338084 taatttgtaacaagtttaaagcttagtaagctttagcttgaggggtagctttaaaagtttatatta 34338149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 16462725 - 16462788
Alignment:
Q  81 tcttgtttggtttagctttaaatggttcttcttattggatggtctctctctttgcctggttgat 144  Q
    ||||||||||||||| || |||||||||||||  ||||||| | |||||||||| || ||||||    
T  16462725 tcttgtttggtttagtttgaaatggttcttctgcttggatgatttctctctttggcttgttgat 16462788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 313
Target Start/End: Original strand, 42531164 - 42531227
Alignment:
Q  250 ttaaagcttagtaagctttaacttcaagggtagtgttagaagtttatattatttagtatgtttt 313  Q
    |||||||||||||||||| |  || | || ||||||||||| |||||| |||||||||||||||    
T  42531164 ttaaagcttagtaagcttcagtttgagggttagtgttagaactttatactatttagtatgtttt 42531227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 313
Target Start/End: Original strand, 29555925 - 29556001
Alignment:
Q  236 aatttgtaacaaacttaaagcttagtaagctttaacttcaagggtagtgttagaagtttatattatttagtatgtttt 313  Q
    ||||||||| || |||||||| |  ||||||||  ||| |||| || ||||||||||||||||||| |||||||||||    
T  29555925 aatttgtaataagcttaaagcctcataagctttggcttgaagg-taatgttagaagtttatattatctagtatgtttt 29556001  T

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Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 313
Target Start/End: Original strand, 20242518 - 20242664
Alignment:
Q  169 gataactcactttggttgctgctattcattggttatgctataacttcatttggtttatttt--cggagtaatttgtaacaaacttaaagcttagtaagct 266  Q
    ||||||||||||||||||||||| |||||||||| |||||  |  | ||||||||||||||    || |||||||||| |  |||||||||||||||||     
T  20242518 gataactcactttggttgctgctcttcattggttctgctaacagctgatttggtttatttttctagattaatttgtaataggcttaaagcttagtaagcc 20242617  T
Q  267 ttaacttcaagggtagtgttagaagtttatattatttagtatgtttt 313  Q
    | ||||| | |||| ||||| ||| ||||||||| ||||||| ||||    
T  20242618 tcaacttgaggggtggtgtttgaactttatattacttagtatatttt 20242664  T

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Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 313
Target Start/End: Complemental strand, 20250642 - 20250496
Alignment:
Q  169 gataactcactttggttgctgctattcattggttatgctataacttcatttggtttatttt--cggagtaatttgtaacaaacttaaagcttagtaagct 266  Q
    ||||||||||||||||||||||| |||||||||| |||||  |  | ||||||||||||||    || |||||||||| |  |||||||||||||||||     
T  20250642 gataactcactttggttgctgctcttcattggttctgctaacagctgatttggtttatttttctagattaatttgtaataggcttaaagcttagtaagcc 20250543  T
Q  267 ttaacttcaagggtagtgttagaagtttatattatttagtatgtttt 313  Q
    | ||||| | |||| ||||| ||| ||||||||| ||||||| ||||    
T  20250542 tcaacttgaggggtggtgtttgaactttatattacttagtatatttt 20250496  T

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Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 313
Target Start/End: Original strand, 5616788 - 5616866
Alignment:
Q  235 taatttgtaacaaacttaaagcttagtaagctttaacttcaagggtagtgttagaagtttatattatttagtatgtttt 313  Q
    |||||||||||||  ||||||||||||| |||||| ||| | |||||||||||||| ||||||||||||| ||| ||||    
T  5616788 taatttgtaacaagtttaaagcttagtaggctttagctttaggggtagtgttagaactttatattatttaatatctttt 5616866  T

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Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 216 - 313
Target Start/End: Complemental strand, 16579054 - 16578956
Alignment:
Q  216 atttggtttattttcggagtaatttgtaacaaacttaaagcttagtaagctttaacttcaaggg--tagtgttagaagtttatattatttagtatgtttt 313  Q
    ||||||||||||||  |  |||||||||||||  |||||||||| ||||||||||||| | |||  ||||||| ||| |||||||||||||| |||||||    
T  16579054 atttggtttatttttaggttaatttgtaacaagtttaaagcttattaagctttaacttgaggggtatagtgttggaa-tttatattatttaggatgtttt 16578956  T

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Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 313
Target Start/End: Complemental strand, 16583794 - 16583696
Alignment:
Q  216 atttggtttattttcggagtaatttgtaacaaacttaaagcttagtaagctttaacttcaagggtagtgt-tagaagtttatattatttagtatgtttt 313  Q
    ||||||||||||||  |  ||||||||| |||| |||||||||||||||||||| ||| | |||||  || ||| | |||||||||||||| |||||||    
T  16583794 atttggtttattttaaggttaatttgtatcaaatttaaagcttagtaagctttagcttgaggggtatagtgtaggaatttatattatttaggatgtttt 16583696  T

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Target: scaffold0007 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 236 - 313
Target Start/End: Complemental strand, 14504 - 14427
Alignment:
Q  236 aatttgtaacaaacttaaagcttagtaagctttaacttcaagggtagtgttagaagtttatattatttagtatgtttt 313  Q
    |||||||||||| ||||||||||||||||||| | ||| |  ||| ||||||||| ||||||||| ||||||||||||    
T  14504 aatttgtaacaagcttaaagcttagtaagcttcagcttgagaggtggtgttagaattttatattaattagtatgtttt 14427  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 313
Target Start/End: Complemental strand, 153539 - 153483
Alignment:
Q  257 ttagtaagctttaacttcaagggtagtgttagaagtttatattatttagtatgtttt 313  Q
    |||| |||||||| ||| | || | ||||||||||||||||||||||||||||||||    
T  153539 ttagcaagctttagcttaatggtttgtgttagaagtttatattatttagtatgtttt 153483  T

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Target: scaffold0048 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 238 - 313
Target Start/End: Complemental strand, 62081 - 62006
Alignment:
Q  238 tttgtaacaaacttaaagcttagtaagctttaacttcaagggtagtgttagaagtttatattatttagtatgtttt 313  Q
    ||||||||||||||||| ||| |||||||||| ||| | |||||| |||   ||||||||||||| ||||| ||||    
T  62081 tttgtaacaaacttaaaacttggtaagctttagcttgacgggtagggttctgagtttatattattgagtatttttt 62006  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 290
Target Start/End: Original strand, 31961 - 32014
Alignment:
Q  237 atttgtaacaaacttaaagcttagtaagctttaacttcaagggtagtgttagaa 290  Q
    ||||||||||| ||||||||||||||||||||| | | | ||| ||||||||||    
T  31961 atttgtaacaagcttaaagcttagtaagctttagcctgagggggagtgttagaa 32014  T

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