View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4338_high_4 (Length: 238)
Name: NF4338_high_4
Description: NF4338
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4338_high_4 |
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Alignment Details
Target: chr1 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 2136021 - 2135800
Alignment:
| Q |
1 |
ttcctacatggaatcctatgctgatcactttcatattcatcctaggtttaatcaaactgttcttagtgctgagtttgattcaacttctcaaatttggatg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2136021 |
ttcctacatggaatcctatgctgatcactttcatattcatcctaggtttaatcaaactgttcttagtgctgagtttgattcaacttctcaaatttggatg |
2135922 |
T |
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| Q |
101 |
gttagaacaaaagaaggtgattttcagtatttttcaccttggcttattgttgctactggtgaaaatgctgaacctgtttttcctacaattcatggcatgg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
2135921 |
gttagaacaaaagaaggtgattttcagtatttttcaccttggcttattgttgctactggtgaaaatgctgaacctgtttttcctacaattcatggtatgg |
2135822 |
T |
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| Q |
201 |
aacattttcatggtcctgttgt |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
2135821 |
aacattttcatggtcctgttgt |
2135800 |
T |
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